HEADER TRANSFERASE 20-JUN-14 4QOX TITLE CRYSTAL STRUCTURE OF CDPK4 FROM PLASMODIUM FALCIPARUM, PF3D7_0717500 COMPND MOL_ID: 1; COMPND 2 MOLECULE: CALCIUM-DEPENDENT PROTEIN KINASE 4; COMPND 3 CHAIN: A; COMPND 4 EC: 2.7.11.1; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PLASMODIUM FALCIPARUM; SOURCE 3 ORGANISM_TAXID: 36329; SOURCE 4 GENE: CDPK4, CPK4, PF07_0072; SOURCE 5 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 7108; SOURCE 7 EXPRESSION_SYSTEM_CELL_LINE: SF9SF9; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: DH5-ALPHA KEYWDS STRUCTURAL GENOMICS, STRUCTURAL GENOMICS CONSORTIUM, SGC, CDPK, KEYWDS 2 PLASMODIUM, MALARIA, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR A.K.WERNIMONT,J.R.WALKER,A.HUTCHINSON,A.SEITOVA,H.HE,P.LOPPNAU, AUTHOR 2 M.NECULAI,M.AMANI,Y.H.LIN,M.RAVICHANDRAN,C.H.ARROWSMITH,A.M.EDWARDS, AUTHOR 3 C.BOUNTRA,R.HUI,D.V.LOVATO,STRUCTURAL GENOMICS CONSORTIUM (SGC) REVDAT 4 28-FEB-24 4QOX 1 REMARK SEQADV LINK REVDAT 3 22-NOV-17 4QOX 1 REMARK REVDAT 2 01-OCT-14 4QOX 1 AUTHOR REVDAT 1 03-SEP-14 4QOX 0 JRNL AUTH A.K.WERNIMONT,J.R.WALKER,A.HUTCHINSON,A.SEITOVA,H.HE, JRNL AUTH 2 P.LOPPNAU,M.NECULAI,M.AMANI,Y.H.LIN,M.RAVICHANDRAN, JRNL AUTH 3 C.H.ARROWSMITH,A.M.EDWARDS,C.BOUNTRA,R.HUI,D.V.LOVATO JRNL TITL CRYSTAL STRUCTURE OF CDPK4 FROM PLASMODIUM FALCIPARUM, JRNL TITL 2 PF3D7_0717500 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.75 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.9_1692 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.75 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 39.56 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.370 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 13411 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.206 REMARK 3 R VALUE (WORKING SET) : 0.203 REMARK 3 FREE R VALUE : 0.266 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.030 REMARK 3 FREE R VALUE TEST SET COUNT : 675 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 39.5672 - 4.6977 1.00 2661 147 0.2015 0.2384 REMARK 3 2 4.6977 - 3.7296 1.00 2538 151 0.1708 0.2601 REMARK 3 3 3.7296 - 3.2584 1.00 2555 123 0.2126 0.2848 REMARK 3 4 3.2584 - 2.9606 1.00 2531 99 0.2409 0.3244 REMARK 3 5 2.9606 - 2.7484 0.99 2451 155 0.2422 0.3047 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.330 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 26.760 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 55.87 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 58.31 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.003 3745 REMARK 3 ANGLE : 0.596 5054 REMARK 3 CHIRALITY : 0.020 569 REMARK 3 PLANARITY : 0.003 635 REMARK 3 DIHEDRAL : 13.834 1362 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 51 THROUGH 248 ) REMARK 3 ORIGIN FOR THE GROUP (A): 27.3025 -10.8107 -0.8831 REMARK 3 T TENSOR REMARK 3 T11: 0.2490 T22: 0.3216 REMARK 3 T33: 0.2765 T12: -0.0088 REMARK 3 T13: 0.0215 T23: -0.0156 REMARK 3 L TENSOR REMARK 3 L11: 1.1787 L22: 3.4732 REMARK 3 L33: 2.9724 L12: -0.0411 REMARK 3 L13: 1.3696 L23: -2.2556 REMARK 3 S TENSOR REMARK 3 S11: 0.0315 S12: -0.2453 S13: -0.0681 REMARK 3 S21: 0.3459 S22: -0.0263 S23: -0.0649 REMARK 3 S31: -0.1447 S32: -0.0441 S33: -0.0255 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 249 THROUGH 528 ) REMARK 3 ORIGIN FOR THE GROUP (A): 43.3163 -1.0776 4.5655 REMARK 3 T TENSOR REMARK 3 T11: 0.3535 T22: 0.2722 REMARK 3 T33: 0.3523 T12: -0.0064 REMARK 3 T13: 0.0478 T23: -0.0338 REMARK 3 L TENSOR REMARK 3 L11: 1.4064 L22: 0.5122 REMARK 3 L33: 1.2761 L12: -0.2025 REMARK 3 L13: 1.0181 L23: -0.4865 REMARK 3 S TENSOR REMARK 3 S11: -0.0474 S12: -0.0430 S13: 0.2011 REMARK 3 S21: 0.0373 S22: -0.0181 S23: -0.0483 REMARK 3 S31: -0.0318 S32: -0.0338 S33: 0.0722 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4QOX COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 25-JUN-14. REMARK 100 THE DEPOSITION ID IS D_1000086328. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-JUN-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 18-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : .97915 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK, HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 13454 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.750 REMARK 200 RESOLUTION RANGE LOW (A) : 45.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 7.500 REMARK 200 R MERGE (I) : 0.14300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 5.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.75 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.80 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 7.70 REMARK 200 R MERGE FOR SHELL (I) : 0.90200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.860 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.5.6 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 38.23 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.99 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 5% GLYCEROL 1MM 3MBPP1 5 MM TCEP 28% REMARK 280 PEG2000 MME 0.1 M BISTRIS PH 6.5, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 35.14450 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 46.34400 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 37.98350 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 46.34400 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 35.14450 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 37.98350 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -8 REMARK 465 HIS A -7 REMARK 465 HIS A -6 REMARK 465 HIS A -5 REMARK 465 HIS A -4 REMARK 465 HIS A -3 REMARK 465 HIS A -2 REMARK 465 SER A -1 REMARK 465 SER A 0 REMARK 465 GLY A 1 REMARK 465 ARG A 2 REMARK 465 GLU A 3 REMARK 465 ASN A 4 REMARK 465 LEU A 5 REMARK 465 TYR A 6 REMARK 465 PHE A 7 REMARK 465 GLN A 8 REMARK 465 GLY A 9 REMARK 465 ASN A 10 REMARK 465 THR A 11 REMARK 465 LYS A 12 REMARK 465 ASN A 13 REMARK 465 GLU A 14 REMARK 465 HIS A 15 REMARK 465 HIS A 16 REMARK 465 LYS A 17 REMARK 465 THR A 18 REMARK 465 ASN A 19 REMARK 465 LYS A 20 REMARK 465 LYS A 21 REMARK 465 SER A 22 REMARK 465 LEU A 23 REMARK 465 LYS A 24 REMARK 465 GLY A 25 REMARK 465 GLY A 26 REMARK 465 ASN A 27 REMARK 465 GLU A 28 REMARK 465 ARG A 29 REMARK 465 HIS A 30 REMARK 465 GLU A 31 REMARK 465 MET A 32 REMARK 465 LYS A 33 REMARK 465 GLU A 34 REMARK 465 SER A 35 REMARK 465 SER A 36 REMARK 465 VAL A 37 REMARK 465 GLY A 38 REMARK 465 ILE A 39 REMARK 465 SER A 40 REMARK 465 LYS A 41 REMARK 465 LYS A 42 REMARK 465 ILE A 43 REMARK 465 VAL A 44 REMARK 465 GLU A 45 REMARK 465 ASN A 46 REMARK 465 SER A 47 REMARK 465 PHE A 48 REMARK 465 ASN A 49 REMARK 465 ASN A 50 REMARK 465 LYS A 206 REMARK 465 LYS A 226 REMARK 465 LYS A 227 REMARK 465 MET A 228 REMARK 465 LYS A 229 REMARK 465 ASP A 230 REMARK 465 ASP A 335 REMARK 465 ASN A 336 REMARK 465 LEU A 337 REMARK 465 ASN A 338 REMARK 465 ILE A 339 REMARK 465 ASP A 340 REMARK 465 ILE A 341 REMARK 465 PRO A 342 REMARK 465 SER A 343 REMARK 465 ASP A 415 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 52 CE NZ REMARK 470 LEU A 53 CG CD1 CD2 REMARK 470 SER A 62 OG REMARK 470 ASN A 63 CG OD1 ND2 REMARK 470 SER A 80 OG REMARK 470 LYS A 104 CG CD CE NZ REMARK 470 LYS A 107 CG CD CE NZ REMARK 470 LYS A 109 CD CE NZ REMARK 470 LYS A 112 CG CD CE NZ REMARK 470 GLU A 113 CG CD OE1 OE2 REMARK 470 ASN A 140 CG OD1 ND2 REMARK 470 SER A 147 OG REMARK 470 LYS A 163 CG CD CE NZ REMARK 470 LYS A 186 CE NZ REMARK 470 THR A 203 OG1 CG2 REMARK 470 LYS A 204 CG CD CE NZ REMARK 470 GLU A 207 CG CD OE1 OE2 REMARK 470 ASP A 208 CG OD1 OD2 REMARK 470 MET A 209 CG SD CE REMARK 470 GLU A 223 CG CD OE1 OE2 REMARK 470 SER A 225 OG REMARK 470 LYS A 231 CG CD CE NZ REMARK 470 THR A 246 OG1 CG2 REMARK 470 TYR A 247 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 SER A 273 OG REMARK 470 LYS A 286 CG CD CE NZ REMARK 470 ASP A 290 CG OD1 OD2 REMARK 470 LYS A 329 CE NZ REMARK 470 MET A 330 CG SD CE REMARK 470 LYS A 334 CG CD CE NZ REMARK 470 LEU A 344 CG CD1 CD2 REMARK 470 LYS A 410 CE NZ REMARK 470 LYS A 412 CG CD CE NZ REMARK 470 GLU A 414 CG CD OE1 OE2 REMARK 470 THR A 416 OG1 CG2 REMARK 470 LYS A 466 CG CD CE NZ REMARK 470 SER A 476 OG REMARK 470 ASP A 492 CG OD1 OD2 REMARK 470 SER A 494 OG REMARK 470 SER A 495 OG REMARK 470 GLU A 496 CG CD OE1 OE2 REMARK 470 ASN A 508 CG OD1 ND2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN A 69 -19.28 -148.82 REMARK 500 ILE A 73 -55.18 -133.15 REMARK 500 PHE A 81 -6.68 68.26 REMARK 500 ASP A 139 -142.95 -124.00 REMARK 500 ARG A 192 -27.81 65.24 REMARK 500 ASP A 208 72.23 -117.04 REMARK 500 ASP A 248 -159.21 -137.23 REMARK 500 LEU A 309 31.03 -99.48 REMARK 500 ASP A 436 94.25 -65.88 REMARK 500 SER A 480 -177.96 -68.50 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 601 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 389 OD1 REMARK 620 2 ASN A 391 OD1 71.7 REMARK 620 3 ASP A 393 OD1 65.2 69.2 REMARK 620 4 GLN A 395 O 103.4 143.6 76.1 REMARK 620 5 HOH A 702 O 147.1 111.5 147.6 92.1 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE DXR A 602 DBREF 4QOX A 10 528 UNP Q8IBS5 CDPK4_PLAF7 10 528 SEQADV 4QOX MET A -8 UNP Q8IBS5 EXPRESSION TAG SEQADV 4QOX HIS A -7 UNP Q8IBS5 EXPRESSION TAG SEQADV 4QOX HIS A -6 UNP Q8IBS5 EXPRESSION TAG SEQADV 4QOX HIS A -5 UNP Q8IBS5 EXPRESSION TAG SEQADV 4QOX HIS A -4 UNP Q8IBS5 EXPRESSION TAG SEQADV 4QOX HIS A -3 UNP Q8IBS5 EXPRESSION TAG SEQADV 4QOX HIS A -2 UNP Q8IBS5 EXPRESSION TAG SEQADV 4QOX SER A -1 UNP Q8IBS5 EXPRESSION TAG SEQADV 4QOX SER A 0 UNP Q8IBS5 EXPRESSION TAG SEQADV 4QOX GLY A 1 UNP Q8IBS5 EXPRESSION TAG SEQADV 4QOX ARG A 2 UNP Q8IBS5 EXPRESSION TAG SEQADV 4QOX GLU A 3 UNP Q8IBS5 EXPRESSION TAG SEQADV 4QOX ASN A 4 UNP Q8IBS5 EXPRESSION TAG SEQADV 4QOX LEU A 5 UNP Q8IBS5 EXPRESSION TAG SEQADV 4QOX TYR A 6 UNP Q8IBS5 EXPRESSION TAG SEQADV 4QOX PHE A 7 UNP Q8IBS5 EXPRESSION TAG SEQADV 4QOX GLN A 8 UNP Q8IBS5 EXPRESSION TAG SEQADV 4QOX GLY A 9 UNP Q8IBS5 EXPRESSION TAG SEQRES 1 A 537 MET HIS HIS HIS HIS HIS HIS SER SER GLY ARG GLU ASN SEQRES 2 A 537 LEU TYR PHE GLN GLY ASN THR LYS ASN GLU HIS HIS LYS SEQRES 3 A 537 THR ASN LYS LYS SER LEU LYS GLY GLY ASN GLU ARG HIS SEQRES 4 A 537 GLU MET LYS GLU SER SER VAL GLY ILE SER LYS LYS ILE SEQRES 5 A 537 VAL GLU ASN SER PHE ASN ASN SER LYS LEU ARG PRO GLY SEQRES 6 A 537 MET PHE ILE GLN ASN SER ASN VAL VAL PHE ASN GLU GLN SEQRES 7 A 537 TYR LYS GLY ILE LYS ILE LEU GLY LYS GLY SER PHE GLY SEQRES 8 A 537 GLU VAL ILE LEU SER ARG ASP LYS HIS THR GLY HIS GLU SEQRES 9 A 537 TYR ALA ILE LYS VAL ILE SER LYS LYS HIS VAL LYS ARG SEQRES 10 A 537 LYS THR ASP LYS GLU SER LEU LEU ARG GLU VAL GLU LEU SEQRES 11 A 537 LEU LYS MET LEU ASP HIS ILE ASN ILE MET LYS LEU TYR SEQRES 12 A 537 GLU PHE PHE GLU ASP ASN ASN TYR TYR TYR LEU VAL SER SEQRES 13 A 537 ASP VAL TYR THR GLY GLY GLU LEU PHE ASP GLU ILE ILE SEQRES 14 A 537 SER ARG LYS ARG PHE TYR GLU ILE ASP ALA ALA ARG ILE SEQRES 15 A 537 ILE LYS GLN ILE LEU SER GLY ILE THR TYR MET HIS LYS SEQRES 16 A 537 ASN ASN VAL VAL HIS ARG ASP LEU LYS PRO GLU ASN ILE SEQRES 17 A 537 LEU LEU GLU THR LYS ASN LYS GLU ASP MET ILE ILE LYS SEQRES 18 A 537 ILE ILE ASP PHE GLY LEU SER THR HIS PHE GLU TYR SER SEQRES 19 A 537 LYS LYS MET LYS ASP LYS ILE GLY THR ALA TYR TYR ILE SEQRES 20 A 537 ALA PRO ASP VAL LEU HIS GLY THR TYR ASP GLU LYS CYS SEQRES 21 A 537 ASP ILE TRP SER CYS GLY VAL ILE LEU TYR ILE LEU LEU SEQRES 22 A 537 SER GLY CYS PRO PRO PHE ASN GLY SER ASN GLU TYR ASP SEQRES 23 A 537 ILE LEU LYS LYS VAL GLU ALA GLY LYS TYR THR PHE ASP SEQRES 24 A 537 LEU PRO GLN PHE LYS LYS ILE SER ASP LYS ALA LYS ASP SEQRES 25 A 537 LEU ILE LYS LYS MET LEU MET TYR THR SER ALA VAL ARG SEQRES 26 A 537 ILE SER ALA ARG ASP ALA LEU GLU HIS GLU TRP ILE LYS SEQRES 27 A 537 MET MET THR SER LYS ASP ASN LEU ASN ILE ASP ILE PRO SEQRES 28 A 537 SER LEU GLU LEU SER ILE ALA ASN ILE ARG GLN PHE GLN SEQRES 29 A 537 SER THR GLN LYS LEU ALA GLN ALA ALA LEU LEU TYR MET SEQRES 30 A 537 GLY SER LYS LEU THR THR ILE ASP GLU THR LYS GLU LEU SEQRES 31 A 537 THR LYS ILE PHE LYS LYS MET ASP LYS ASN GLY ASP GLY SEQRES 32 A 537 GLN LEU ASP ARG ASN GLU LEU ILE ILE GLY TYR LYS GLU SEQRES 33 A 537 LEU LEU LYS LEU LYS GLY GLU ASP THR SER ASP LEU ASP SEQRES 34 A 537 ASN ALA ALA ILE GLU TYR GLU VAL ASP GLN ILE LEU ASN SEQRES 35 A 537 SER ILE ASP LEU ASP GLN ASN GLY TYR ILE GLU TYR SER SEQRES 36 A 537 GLU PHE LEU THR VAL SER ILE ASP ARG LYS LEU LEU LEU SEQRES 37 A 537 SER THR GLU ARG LEU GLU LYS ALA PHE LYS LEU PHE ASP SEQRES 38 A 537 LYS ASP GLY SER GLY LYS ILE SER ALA ASN GLU LEU ALA SEQRES 39 A 537 GLN LEU PHE GLY LEU SER ASP VAL SER SER GLU CYS TRP SEQRES 40 A 537 LYS THR VAL LEU LYS GLU VAL ASP GLN ASN ASN ASP GLY SEQRES 41 A 537 GLU ILE ASP PHE LYS GLU PHE ARG ASP MET LEU VAL LYS SEQRES 42 A 537 LEU CYS ASN TYR HET MG A 601 1 HET DXR A 602 44 HETNAM MG MAGNESIUM ION HETNAM DXR 3-(3-BROMOBENZYL)-1-TERT-BUTYL-1H-PYRAZOLO[3,4- HETNAM 2 DXR D]PYRIMIDIN-4-AMINE FORMUL 2 MG MG 2+ FORMUL 3 DXR C16 H18 BR N5 FORMUL 4 HOH *18(H2 O) HELIX 1 1 ASP A 111 MET A 124 1 14 HELIX 2 2 LEU A 155 ILE A 160 1 6 HELIX 3 3 GLU A 167 ASN A 187 1 21 HELIX 4 4 LYS A 195 GLU A 197 5 3 HELIX 5 5 ALA A 239 HIS A 244 1 6 HELIX 6 6 LYS A 250 GLY A 266 1 17 HELIX 7 7 ASN A 274 GLY A 285 1 12 HELIX 8 8 SER A 298 LEU A 309 1 12 HELIX 9 9 SER A 318 GLU A 324 1 7 HELIX 10 10 HIS A 325 THR A 332 1 8 HELIX 11 11 SER A 347 LYS A 387 1 41 HELIX 12 12 ARG A 398 LEU A 411 1 14 HELIX 13 13 SER A 417 ASN A 433 1 17 HELIX 14 14 TYR A 445 ASP A 472 1 28 HELIX 15 15 SER A 480 SER A 491 1 12 HELIX 16 16 SER A 494 ASP A 506 1 13 HELIX 17 17 ASP A 514 TYR A 528 1 15 SHEET 1 A 6 VAL A 65 PHE A 66 0 SHEET 2 A 6 TYR A 70 GLY A 79 -1 O TYR A 70 N PHE A 66 SHEET 3 A 6 GLY A 82 ASP A 89 -1 O LEU A 86 N LYS A 74 SHEET 4 A 6 GLU A 95 SER A 102 -1 O VAL A 100 N GLU A 83 SHEET 5 A 6 TYR A 142 SER A 147 -1 O TYR A 143 N ILE A 101 SHEET 6 A 6 LEU A 133 GLU A 138 -1 N TYR A 134 O VAL A 146 SHEET 1 B 2 VAL A 106 ARG A 108 0 SHEET 2 B 2 PHE A 222 TYR A 224 -1 O GLU A 223 N LYS A 107 SHEET 1 C 3 GLY A 153 GLU A 154 0 SHEET 2 C 3 ILE A 199 LEU A 201 -1 O LEU A 201 N GLY A 153 SHEET 3 C 3 ILE A 211 ILE A 213 -1 O LYS A 212 N LEU A 200 SHEET 1 D 2 PHE A 165 TYR A 166 0 SHEET 2 D 2 GLU A 345 LEU A 346 -1 O LEU A 346 N PHE A 165 SHEET 1 E 2 GLN A 395 ASP A 397 0 SHEET 2 E 2 TYR A 442 GLU A 444 -1 O ILE A 443 N LEU A 396 LINK OD1 ASP A 389 MG MG A 601 1555 1555 2.49 LINK OD1 ASN A 391 MG MG A 601 1555 1555 2.50 LINK OD1 ASP A 393 MG MG A 601 1555 1555 2.89 LINK O GLN A 395 MG MG A 601 1555 1555 2.70 LINK MG MG A 601 O HOH A 702 1555 1555 2.79 SITE 1 AC1 5 ASP A 389 ASN A 391 ASP A 393 GLN A 395 SITE 2 AC1 5 HOH A 702 SITE 1 AC2 12 LEU A 76 LYS A 78 VAL A 84 ALA A 97 SITE 2 AC2 12 LYS A 99 MET A 131 LEU A 145 SER A 147 SITE 3 AC2 12 ASP A 148 TYR A 150 ILE A 214 ASP A 215 CRYST1 70.289 75.967 92.688 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014227 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013164 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010789 0.00000