HEADER TRANSFERASE/TRANSFERASE INHIBITOR 22-JUN-14 4QP7 TITLE CRYSTAL STRUCTURE OF ERK2 IN COMPLEX WITH 2-(1H-PYRAZOL-4-YL)-5H- TITLE 2 PYRROLO[2,3-B]PYRAZINE COMPND MOL_ID: 1; COMPND 2 MOLECULE: MITOGEN-ACTIVATED PROTEIN KINASE 1; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: MAP KINASE 1, MAPK 1, ERT1, EXTRACELLULAR SIGNAL-REGULATED COMPND 5 KINASE 2, ERK-2, MAP KINASE ISOFORM P42, P42-MAPK, MITOGEN-ACTIVATED COMPND 6 PROTEIN KINASE 2, MAP KINASE 2, MAPK 2; COMPND 7 EC: 2.7.11.24; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: MAPK1, ERK2, PRKM1, PRKM2; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS KINASE, TRANSFERASE-TRANSFERASE INHIBITOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR J.YIN,W.WANG REVDAT 3 28-FEB-24 4QP7 1 REMARK SEQADV REVDAT 2 16-DEC-15 4QP7 1 JRNL REVDAT 1 23-SEP-15 4QP7 0 JRNL AUTH D.J.BURDICK,S.WANG,C.HEISE,B.PAN,J.DRUMMOND,J.YIN,L.GOESER, JRNL AUTH 2 S.MAGNUSON,J.BLANEY,J.MOFFAT,W.WANG,H.CHEN JRNL TITL FRAGMENT-BASED DISCOVERY OF POTENT ERK2 PYRROLOPYRAZINE JRNL TITL 2 INHIBITORS. JRNL REF BIOORG.MED.CHEM.LETT. V. 25 4728 2015 JRNL REFN ISSN 0960-894X JRNL PMID 26338362 JRNL DOI 10.1016/J.BMCL.2015.08.048 REMARK 2 REMARK 2 RESOLUTION. 2.25 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.8.2_1309) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.25 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 43.83 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.6 REMARK 3 NUMBER OF REFLECTIONS : 31266 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.208 REMARK 3 R VALUE (WORKING SET) : 0.206 REMARK 3 FREE R VALUE : 0.243 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.080 REMARK 3 FREE R VALUE TEST SET COUNT : 1588 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 43.8387 - 4.9985 0.99 2816 154 0.1899 0.2277 REMARK 3 2 4.9985 - 3.9683 1.00 2754 160 0.1720 0.2170 REMARK 3 3 3.9683 - 3.4669 1.00 2784 161 0.1899 0.2266 REMARK 3 4 3.4669 - 3.1500 1.00 2753 143 0.2158 0.2312 REMARK 3 5 3.1500 - 2.9243 1.00 2763 143 0.2268 0.2498 REMARK 3 6 2.9243 - 2.7519 1.00 2765 149 0.2371 0.2865 REMARK 3 7 2.7519 - 2.6141 1.00 2726 152 0.2296 0.3155 REMARK 3 8 2.6141 - 2.5003 1.00 2752 135 0.2391 0.2669 REMARK 3 9 2.5003 - 2.4041 1.00 2750 154 0.2372 0.2739 REMARK 3 10 2.4041 - 2.3211 0.95 2629 125 0.2430 0.2776 REMARK 3 11 2.3211 - 2.2486 0.80 2186 112 0.2678 0.2895 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.250 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 26.410 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.003 5652 REMARK 3 ANGLE : 0.729 7654 REMARK 3 CHIRALITY : 0.057 840 REMARK 3 PLANARITY : 0.003 982 REMARK 3 DIHEDRAL : 13.261 2142 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ( CHAIN A AND ( RESID 11:108 OR RESID 335:355 ) ) REMARK 3 ORIGIN FOR THE GROUP (A): 4.1365 -13.8674 6.4445 REMARK 3 T TENSOR REMARK 3 T11: 0.4123 T22: 0.4590 REMARK 3 T33: 0.3667 T12: 0.0232 REMARK 3 T13: 0.0013 T23: 0.0154 REMARK 3 L TENSOR REMARK 3 L11: 1.5444 L22: 1.4941 REMARK 3 L33: 2.6896 L12: 0.6484 REMARK 3 L13: 1.3417 L23: 0.4677 REMARK 3 S TENSOR REMARK 3 S11: 0.0829 S12: 0.1159 S13: -0.0399 REMARK 3 S21: -0.0110 S22: 0.0506 S23: 0.0912 REMARK 3 S31: 0.3859 S32: -0.1947 S33: 0.0001 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: ( CHAIN A AND RESID 109:334 ) REMARK 3 ORIGIN FOR THE GROUP (A): 25.6305 -0.6610 16.9954 REMARK 3 T TENSOR REMARK 3 T11: 0.3203 T22: 0.2318 REMARK 3 T33: 0.3088 T12: 0.0007 REMARK 3 T13: 0.0522 T23: -0.0057 REMARK 3 L TENSOR REMARK 3 L11: 1.4646 L22: 1.3471 REMARK 3 L33: 2.4354 L12: -0.1376 REMARK 3 L13: 0.8388 L23: -0.4362 REMARK 3 S TENSOR REMARK 3 S11: -0.0021 S12: -0.0814 S13: 0.0606 REMARK 3 S21: 0.0388 S22: -0.0217 S23: -0.0066 REMARK 3 S31: -0.1959 S32: -0.0191 S33: 0.0034 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: ( CHAIN B AND ( RESID 10:108 OR RESID 335:355 ) ) REMARK 3 ORIGIN FOR THE GROUP (A): 45.7267 -47.9703 36.1616 REMARK 3 T TENSOR REMARK 3 T11: 0.3565 T22: 0.4716 REMARK 3 T33: 0.4064 T12: 0.0157 REMARK 3 T13: 0.0013 T23: 0.0078 REMARK 3 L TENSOR REMARK 3 L11: 1.6084 L22: 2.0309 REMARK 3 L33: 1.9050 L12: -0.6758 REMARK 3 L13: 0.0236 L23: -1.5500 REMARK 3 S TENSOR REMARK 3 S11: -0.1013 S12: 0.0343 S13: -0.1291 REMARK 3 S21: -0.1786 S22: -0.0460 S23: -0.2337 REMARK 3 S31: 0.3637 S32: 0.3218 S33: -0.0002 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: ( CHAIN B AND RESID 109:334 ) REMARK 3 ORIGIN FOR THE GROUP (A): 24.1024 -33.4537 26.3808 REMARK 3 T TENSOR REMARK 3 T11: 0.2578 T22: 0.2155 REMARK 3 T33: 0.2712 T12: 0.0282 REMARK 3 T13: 0.0292 T23: -0.0094 REMARK 3 L TENSOR REMARK 3 L11: 2.2133 L22: 1.7881 REMARK 3 L33: 1.9241 L12: 0.6565 REMARK 3 L13: 0.5048 L23: 0.1857 REMARK 3 S TENSOR REMARK 3 S11: -0.0771 S12: 0.1123 S13: -0.1884 REMARK 3 S21: -0.2708 S22: -0.0247 S23: -0.0223 REMARK 3 S31: 0.1588 S32: 0.0472 S33: -0.0219 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4QP7 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 25-JUN-14. REMARK 100 THE DEPOSITION ID IS D_1000086338. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 07-NOV-08 REMARK 200 TEMPERATURE (KELVIN) : 93 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 5.0.2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 31294 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.249 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.4 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 38.30 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.99 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 10% PEG3350, 0.2 M PROLINE, AND 0.1 M REMARK 280 HEPES PH7.5, IN A 24-WELL LINBRO PLATES INCUBATED AT 4C, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 33.68000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -8 REMARK 465 GLY A -7 REMARK 465 SER A -6 REMARK 465 HIS A -5 REMARK 465 HIS A -4 REMARK 465 HIS A -3 REMARK 465 HIS A -2 REMARK 465 HIS A -1 REMARK 465 HIS A 0 REMARK 465 MET A 1 REMARK 465 ALA A 2 REMARK 465 ALA A 3 REMARK 465 ALA A 4 REMARK 465 ALA A 5 REMARK 465 ALA A 6 REMARK 465 ALA A 7 REMARK 465 GLY A 8 REMARK 465 ALA A 9 REMARK 465 GLY A 10 REMARK 465 PRO A 11 REMARK 465 GLU A 12 REMARK 465 PRO A 176 REMARK 465 ASP A 177 REMARK 465 HIS A 178 REMARK 465 ASP A 179 REMARK 465 HIS A 180 REMARK 465 THR A 181 REMARK 465 GLY A 182 REMARK 465 PHE A 183 REMARK 465 TYR A 358 REMARK 465 ARG A 359 REMARK 465 SER A 360 REMARK 465 MET B -8 REMARK 465 GLY B -7 REMARK 465 SER B -6 REMARK 465 HIS B -5 REMARK 465 HIS B -4 REMARK 465 HIS B -3 REMARK 465 HIS B -2 REMARK 465 HIS B -1 REMARK 465 HIS B 0 REMARK 465 MET B 1 REMARK 465 ALA B 2 REMARK 465 ALA B 3 REMARK 465 ALA B 4 REMARK 465 ALA B 5 REMARK 465 ALA B 6 REMARK 465 ALA B 7 REMARK 465 GLY B 8 REMARK 465 ALA B 9 REMARK 465 GLY B 10 REMARK 465 PRO B 11 REMARK 465 ASP B 175 REMARK 465 PRO B 176 REMARK 465 ASP B 177 REMARK 465 HIS B 178 REMARK 465 ASP B 179 REMARK 465 HIS B 180 REMARK 465 THR B 181 REMARK 465 GLY B 182 REMARK 465 PHE B 183 REMARK 465 LEU B 184 REMARK 465 THR B 185 REMARK 465 TYR B 358 REMARK 465 ARG B 359 REMARK 465 SER B 360 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O GLU B 197 CD1 ILE B 256 1.77 REMARK 500 O HOH B 569 O HOH B 571 1.96 REMARK 500 O HOH A 529 O HOH A 564 1.97 REMARK 500 O PRO A 298 O HOH A 541 1.97 REMARK 500 O HOH B 503 O HOH B 540 2.04 REMARK 500 NH1 ARG B 191 O HOH B 568 2.10 REMARK 500 O HOH B 509 O HOH B 521 2.18 REMARK 500 O ASP A 337 O HOH A 532 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O CYS A 254 O HOH B 547 2656 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 148 -6.40 71.74 REMARK 500 ASP A 167 84.56 62.32 REMARK 500 THR A 206 -162.66 -110.36 REMARK 500 ILE A 255 94.64 -67.78 REMARK 500 LEU A 294 55.09 -93.76 REMARK 500 ASP A 318 93.01 -161.73 REMARK 500 PHE A 331 90.12 -66.30 REMARK 500 PRO A 356 101.75 -57.10 REMARK 500 ARG B 148 -2.86 72.61 REMARK 500 ASP B 149 37.17 -141.71 REMARK 500 ASP B 167 85.59 61.46 REMARK 500 THR B 190 125.09 -170.30 REMARK 500 MET B 199 151.97 -44.95 REMARK 500 LEU B 200 -151.22 78.22 REMARK 500 SER B 202 50.37 -67.78 REMARK 500 LYS B 203 146.91 65.48 REMARK 500 TYR B 205 -86.44 -95.85 REMARK 500 ASN B 253 45.67 -100.47 REMARK 500 LEU B 294 59.18 -95.47 REMARK 500 ASP B 318 97.23 -163.32 REMARK 500 PHE B 331 -70.88 44.89 REMARK 500 ASP B 332 6.61 81.48 REMARK 500 GLU B 334 91.40 -67.30 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 MET B 199 LEU B 200 -149.73 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 363 A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 363 B 401 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4QP1 RELATED DB: PDB REMARK 900 RELATED ID: 4QP2 RELATED DB: PDB REMARK 900 RELATED ID: 4QP3 RELATED DB: PDB REMARK 900 RELATED ID: 4QP4 RELATED DB: PDB REMARK 900 RELATED ID: 4QP6 RELATED DB: PDB REMARK 900 RELATED ID: 4QP8 RELATED DB: PDB REMARK 900 RELATED ID: 4QP9 RELATED DB: PDB REMARK 900 RELATED ID: 4QPA RELATED DB: PDB DBREF 4QP7 A 1 360 UNP P28482 MK01_HUMAN 1 360 DBREF 4QP7 B 1 360 UNP P28482 MK01_HUMAN 1 360 SEQADV 4QP7 MET A -8 UNP P28482 EXPRESSION TAG SEQADV 4QP7 GLY A -7 UNP P28482 EXPRESSION TAG SEQADV 4QP7 SER A -6 UNP P28482 EXPRESSION TAG SEQADV 4QP7 HIS A -5 UNP P28482 EXPRESSION TAG SEQADV 4QP7 HIS A -4 UNP P28482 EXPRESSION TAG SEQADV 4QP7 HIS A -3 UNP P28482 EXPRESSION TAG SEQADV 4QP7 HIS A -2 UNP P28482 EXPRESSION TAG SEQADV 4QP7 HIS A -1 UNP P28482 EXPRESSION TAG SEQADV 4QP7 HIS A 0 UNP P28482 EXPRESSION TAG SEQADV 4QP7 MET B -8 UNP P28482 EXPRESSION TAG SEQADV 4QP7 GLY B -7 UNP P28482 EXPRESSION TAG SEQADV 4QP7 SER B -6 UNP P28482 EXPRESSION TAG SEQADV 4QP7 HIS B -5 UNP P28482 EXPRESSION TAG SEQADV 4QP7 HIS B -4 UNP P28482 EXPRESSION TAG SEQADV 4QP7 HIS B -3 UNP P28482 EXPRESSION TAG SEQADV 4QP7 HIS B -2 UNP P28482 EXPRESSION TAG SEQADV 4QP7 HIS B -1 UNP P28482 EXPRESSION TAG SEQADV 4QP7 HIS B 0 UNP P28482 EXPRESSION TAG SEQRES 1 A 369 MET GLY SER HIS HIS HIS HIS HIS HIS MET ALA ALA ALA SEQRES 2 A 369 ALA ALA ALA GLY ALA GLY PRO GLU MET VAL ARG GLY GLN SEQRES 3 A 369 VAL PHE ASP VAL GLY PRO ARG TYR THR ASN LEU SER TYR SEQRES 4 A 369 ILE GLY GLU GLY ALA TYR GLY MET VAL CYS SER ALA TYR SEQRES 5 A 369 ASP ASN VAL ASN LYS VAL ARG VAL ALA ILE LYS LYS ILE SEQRES 6 A 369 SER PRO PHE GLU HIS GLN THR TYR CYS GLN ARG THR LEU SEQRES 7 A 369 ARG GLU ILE LYS ILE LEU LEU ARG PHE ARG HIS GLU ASN SEQRES 8 A 369 ILE ILE GLY ILE ASN ASP ILE ILE ARG ALA PRO THR ILE SEQRES 9 A 369 GLU GLN MET LYS ASP VAL TYR ILE VAL GLN ASP LEU MET SEQRES 10 A 369 GLU THR ASP LEU TYR LYS LEU LEU LYS THR GLN HIS LEU SEQRES 11 A 369 SER ASN ASP HIS ILE CYS TYR PHE LEU TYR GLN ILE LEU SEQRES 12 A 369 ARG GLY LEU LYS TYR ILE HIS SER ALA ASN VAL LEU HIS SEQRES 13 A 369 ARG ASP LEU LYS PRO SER ASN LEU LEU LEU ASN THR THR SEQRES 14 A 369 CYS ASP LEU LYS ILE CYS ASP PHE GLY LEU ALA ARG VAL SEQRES 15 A 369 ALA ASP PRO ASP HIS ASP HIS THR GLY PHE LEU THR GLU SEQRES 16 A 369 TYR VAL ALA THR ARG TRP TYR ARG ALA PRO GLU ILE MET SEQRES 17 A 369 LEU ASN SER LYS GLY TYR THR LYS SER ILE ASP ILE TRP SEQRES 18 A 369 SER VAL GLY CYS ILE LEU ALA GLU MET LEU SER ASN ARG SEQRES 19 A 369 PRO ILE PHE PRO GLY LYS HIS TYR LEU ASP GLN LEU ASN SEQRES 20 A 369 HIS ILE LEU GLY ILE LEU GLY SER PRO SER GLN GLU ASP SEQRES 21 A 369 LEU ASN CYS ILE ILE ASN LEU LYS ALA ARG ASN TYR LEU SEQRES 22 A 369 LEU SER LEU PRO HIS LYS ASN LYS VAL PRO TRP ASN ARG SEQRES 23 A 369 LEU PHE PRO ASN ALA ASP SER LYS ALA LEU ASP LEU LEU SEQRES 24 A 369 ASP LYS MET LEU THR PHE ASN PRO HIS LYS ARG ILE GLU SEQRES 25 A 369 VAL GLU GLN ALA LEU ALA HIS PRO TYR LEU GLU GLN TYR SEQRES 26 A 369 TYR ASP PRO SER ASP GLU PRO ILE ALA GLU ALA PRO PHE SEQRES 27 A 369 LYS PHE ASP MET GLU LEU ASP ASP LEU PRO LYS GLU LYS SEQRES 28 A 369 LEU LYS GLU LEU ILE PHE GLU GLU THR ALA ARG PHE GLN SEQRES 29 A 369 PRO GLY TYR ARG SER SEQRES 1 B 369 MET GLY SER HIS HIS HIS HIS HIS HIS MET ALA ALA ALA SEQRES 2 B 369 ALA ALA ALA GLY ALA GLY PRO GLU MET VAL ARG GLY GLN SEQRES 3 B 369 VAL PHE ASP VAL GLY PRO ARG TYR THR ASN LEU SER TYR SEQRES 4 B 369 ILE GLY GLU GLY ALA TYR GLY MET VAL CYS SER ALA TYR SEQRES 5 B 369 ASP ASN VAL ASN LYS VAL ARG VAL ALA ILE LYS LYS ILE SEQRES 6 B 369 SER PRO PHE GLU HIS GLN THR TYR CYS GLN ARG THR LEU SEQRES 7 B 369 ARG GLU ILE LYS ILE LEU LEU ARG PHE ARG HIS GLU ASN SEQRES 8 B 369 ILE ILE GLY ILE ASN ASP ILE ILE ARG ALA PRO THR ILE SEQRES 9 B 369 GLU GLN MET LYS ASP VAL TYR ILE VAL GLN ASP LEU MET SEQRES 10 B 369 GLU THR ASP LEU TYR LYS LEU LEU LYS THR GLN HIS LEU SEQRES 11 B 369 SER ASN ASP HIS ILE CYS TYR PHE LEU TYR GLN ILE LEU SEQRES 12 B 369 ARG GLY LEU LYS TYR ILE HIS SER ALA ASN VAL LEU HIS SEQRES 13 B 369 ARG ASP LEU LYS PRO SER ASN LEU LEU LEU ASN THR THR SEQRES 14 B 369 CYS ASP LEU LYS ILE CYS ASP PHE GLY LEU ALA ARG VAL SEQRES 15 B 369 ALA ASP PRO ASP HIS ASP HIS THR GLY PHE LEU THR GLU SEQRES 16 B 369 TYR VAL ALA THR ARG TRP TYR ARG ALA PRO GLU ILE MET SEQRES 17 B 369 LEU ASN SER LYS GLY TYR THR LYS SER ILE ASP ILE TRP SEQRES 18 B 369 SER VAL GLY CYS ILE LEU ALA GLU MET LEU SER ASN ARG SEQRES 19 B 369 PRO ILE PHE PRO GLY LYS HIS TYR LEU ASP GLN LEU ASN SEQRES 20 B 369 HIS ILE LEU GLY ILE LEU GLY SER PRO SER GLN GLU ASP SEQRES 21 B 369 LEU ASN CYS ILE ILE ASN LEU LYS ALA ARG ASN TYR LEU SEQRES 22 B 369 LEU SER LEU PRO HIS LYS ASN LYS VAL PRO TRP ASN ARG SEQRES 23 B 369 LEU PHE PRO ASN ALA ASP SER LYS ALA LEU ASP LEU LEU SEQRES 24 B 369 ASP LYS MET LEU THR PHE ASN PRO HIS LYS ARG ILE GLU SEQRES 25 B 369 VAL GLU GLN ALA LEU ALA HIS PRO TYR LEU GLU GLN TYR SEQRES 26 B 369 TYR ASP PRO SER ASP GLU PRO ILE ALA GLU ALA PRO PHE SEQRES 27 B 369 LYS PHE ASP MET GLU LEU ASP ASP LEU PRO LYS GLU LYS SEQRES 28 B 369 LEU LYS GLU LEU ILE PHE GLU GLU THR ALA ARG PHE GLN SEQRES 29 B 369 PRO GLY TYR ARG SER HET 363 A 401 14 HET 363 B 401 14 HETNAM 363 2-(1H-PYRAZOL-4-YL)-5H-PYRROLO[2,3-B]PYRAZINE FORMUL 3 363 2(C9 H7 N5) FORMUL 5 HOH *144(H2 O) HELIX 1 1 HIS A 61 PHE A 78 1 18 HELIX 2 2 LEU A 112 GLN A 119 1 8 HELIX 3 3 SER A 122 ALA A 143 1 22 HELIX 4 4 LYS A 151 SER A 153 5 3 HELIX 5 5 ALA A 195 LEU A 200 1 6 HELIX 6 6 LYS A 207 ASN A 224 1 18 HELIX 7 7 HIS A 232 GLY A 245 1 14 HELIX 8 8 ASN A 257 LEU A 265 1 9 HELIX 9 9 PRO A 274 PHE A 279 1 6 HELIX 10 10 ASP A 283 LEU A 294 1 12 HELIX 11 11 GLU A 303 ALA A 309 1 7 HELIX 12 12 HIS A 310 GLU A 314 5 5 HELIX 13 13 ASP A 318 GLU A 322 5 5 HELIX 14 14 PRO A 339 THR A 351 1 13 HELIX 15 15 ALA A 352 GLN A 355 5 4 HELIX 16 16 HIS B 61 PHE B 78 1 18 HELIX 17 17 LEU B 112 GLN B 119 1 8 HELIX 18 18 SER B 122 ALA B 143 1 22 HELIX 19 19 LYS B 151 SER B 153 5 3 HELIX 20 20 LYS B 207 ASN B 224 1 18 HELIX 21 21 HIS B 232 GLY B 245 1 14 HELIX 22 22 ASN B 257 LEU B 267 1 11 HELIX 23 23 PRO B 274 PHE B 279 1 6 HELIX 24 24 ASP B 283 LEU B 294 1 12 HELIX 25 25 ASN B 297 ARG B 301 5 5 HELIX 26 26 GLU B 303 ALA B 309 1 7 HELIX 27 27 HIS B 310 GLU B 314 5 5 HELIX 28 28 ASP B 318 GLU B 322 5 5 HELIX 29 29 PRO B 339 ALA B 352 1 14 HELIX 30 30 ARG B 353 GLN B 355 5 3 SHEET 1 A 5 TYR A 25 GLU A 33 0 SHEET 2 A 5 MET A 38 ASP A 44 -1 O TYR A 43 N THR A 26 SHEET 3 A 5 VAL A 49 ILE A 56 -1 O ILE A 53 N CYS A 40 SHEET 4 A 5 VAL A 101 ASP A 106 -1 O GLN A 105 N ALA A 52 SHEET 5 A 5 ASP A 88 ILE A 90 -1 N ASP A 88 O VAL A 104 SHEET 1 B 3 THR A 110 ASP A 111 0 SHEET 2 B 3 LEU A 155 LEU A 157 -1 O LEU A 157 N THR A 110 SHEET 3 B 3 LEU A 163 ILE A 165 -1 O LYS A 164 N LEU A 156 SHEET 1 C 2 VAL A 145 LEU A 146 0 SHEET 2 C 2 ARG A 172 VAL A 173 -1 O ARG A 172 N LEU A 146 SHEET 1 D 2 MET B 13 VAL B 14 0 SHEET 2 D 2 GLN B 17 VAL B 18 -1 O GLN B 17 N VAL B 14 SHEET 1 E 5 TYR B 25 GLU B 33 0 SHEET 2 E 5 MET B 38 ASP B 44 -1 O TYR B 43 N THR B 26 SHEET 3 E 5 VAL B 49 ILE B 56 -1 O ILE B 53 N CYS B 40 SHEET 4 E 5 VAL B 101 ASP B 106 -1 O GLN B 105 N ALA B 52 SHEET 5 E 5 ASP B 88 ILE B 90 -1 N ASP B 88 O VAL B 104 SHEET 1 F 3 THR B 110 ASP B 111 0 SHEET 2 F 3 LEU B 155 LEU B 157 -1 O LEU B 157 N THR B 110 SHEET 3 F 3 LEU B 163 ILE B 165 -1 O LYS B 164 N LEU B 156 SHEET 1 G 2 VAL B 145 LEU B 146 0 SHEET 2 G 2 ARG B 172 VAL B 173 -1 O ARG B 172 N LEU B 146 CISPEP 1 GLY A 22 PRO A 23 0 1.94 CISPEP 2 GLY B 22 PRO B 23 0 -2.85 SITE 1 AC1 7 ALA A 52 GLN A 105 ASP A 106 LEU A 107 SITE 2 AC1 7 MET A 108 ASP A 111 LYS A 114 SITE 1 AC2 8 ALA B 52 GLN B 105 ASP B 106 LEU B 107 SITE 2 AC2 8 MET B 108 ASP B 111 LYS B 114 LEU B 156 CRYST1 59.070 67.360 87.260 90.00 102.27 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016929 0.000000 0.003682 0.00000 SCALE2 0.000000 0.014846 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011728 0.00000