HEADER LIGASE/LIGASE INHIBITOR 30-JUN-14 4QRE TITLE STRUCTURE OF METHIONYL-TRNA SYNTHETASE IN COMPLEX WITH 1-(4-{4-[(1H- TITLE 2 BENZIMIDAZOL-2-YLMETHYL)AMINO]-6-(4,5-DIMETHOXY-2-METHYLPHENOXY) TITLE 3 PYRIMIDIN-2-YL}PIPERAZIN-1-YL)ETHANONE CAVEAT 4QRE CHIRALITY ERRORS ON CA CENTER OF LYS 149 A, ON CA AND CB CAVEAT 2 4QRE CENTERS OF ILE 150 A COMPND MOL_ID: 1; COMPND 2 MOLECULE: METHIONYL-TRNA SYNTHETASE; COMPND 3 CHAIN: A; COMPND 4 EC: 6.1.1.10; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STAPHYLOCOCCUS AUREUS; SOURCE 3 ORGANISM_TAXID: 1280; SOURCE 4 GENE: METG, CH52_03385; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS PROTEIN SYNTHESIS, AMINOACYL-TRNA SYNTHETASE, AMINOACYLATION, KEYWDS 2 CYTOSOL, LIGASE-LIGASE INHIBITOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR M.T.HILGERS REVDAT 2 28-FEB-24 4QRE 1 REMARK SEQADV LINK REVDAT 1 29-JUL-15 4QRE 0 JRNL AUTH X.LI,M.T.HILGERS,M.STIDHAM,V.BROWN-DRIVER,K.J.SHAW,J.FINN JRNL TITL DISCOVERY AND SAR OF A NOVEL SERIES OF PYRIMIDINE JRNL TITL 2 ANTIBACTERIALS TARGETING METHIONYL-TRNA SYNTHETASE JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 21.45 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 94.5 REMARK 3 NUMBER OF REFLECTIONS : NULL REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.204 REMARK 3 R VALUE (WORKING SET) : 0.202 REMARK 3 FREE R VALUE : 0.240 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 3141 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.70 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.74 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3856 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 86.42 REMARK 3 BIN R VALUE (WORKING SET) : 0.3130 REMARK 3 BIN FREE R VALUE SET COUNT : 228 REMARK 3 BIN FREE R VALUE : 0.3710 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4220 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 71 REMARK 3 SOLVENT ATOMS : 615 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 24.28 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.04000 REMARK 3 B22 (A**2) : 0.14000 REMARK 3 B33 (A**2) : -0.09000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.127 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.122 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.074 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.237 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.949 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.930 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4407 ; 0.011 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5991 ; 1.791 ; 1.975 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 518 ; 6.800 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 212 ;38.033 ;24.670 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 743 ;12.938 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 18 ;14.328 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 635 ; 0.093 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3371 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 2265 ; 0.220 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 3023 ; 0.315 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 462 ; 0.115 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): 2 ; 0.048 ; 0.200 REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 46 ; 0.161 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 33 ; 0.141 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2681 ; 0.540 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 4207 ; 0.870 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2041 ; 1.425 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1784 ; 2.053 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 13 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 2 A 97 REMARK 3 ORIGIN FOR THE GROUP (A): 12.324 11.080 11.974 REMARK 3 T TENSOR REMARK 3 T11: -0.0034 T22: -0.0682 REMARK 3 T33: -0.0168 T12: 0.0076 REMARK 3 T13: 0.0058 T23: 0.0017 REMARK 3 L TENSOR REMARK 3 L11: 1.0469 L22: 0.3079 REMARK 3 L33: 0.4749 L12: -0.2771 REMARK 3 L13: 0.1263 L23: -0.1266 REMARK 3 S TENSOR REMARK 3 S11: -0.0329 S12: -0.1180 S13: -0.0109 REMARK 3 S21: 0.0363 S22: 0.0085 S23: -0.0065 REMARK 3 S31: -0.0287 S32: -0.0337 S33: 0.0244 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 98 A 117 REMARK 3 ORIGIN FOR THE GROUP (A): 5.716 13.506 -9.042 REMARK 3 T TENSOR REMARK 3 T11: -0.0208 T22: -0.0630 REMARK 3 T33: -0.0072 T12: 0.0147 REMARK 3 T13: -0.0001 T23: 0.0120 REMARK 3 L TENSOR REMARK 3 L11: 1.1254 L22: 2.0542 REMARK 3 L33: 4.3047 L12: 0.6793 REMARK 3 L13: 1.0726 L23: 2.2930 REMARK 3 S TENSOR REMARK 3 S11: -0.0273 S12: 0.1009 S13: 0.0530 REMARK 3 S21: -0.0502 S22: -0.0613 S23: 0.0647 REMARK 3 S31: -0.1314 S32: -0.1080 S33: 0.0886 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 118 A 136 REMARK 3 ORIGIN FOR THE GROUP (A): -8.819 -1.753 0.261 REMARK 3 T TENSOR REMARK 3 T11: -0.0022 T22: -0.1051 REMARK 3 T33: -0.0031 T12: -0.0455 REMARK 3 T13: 0.0163 T23: -0.0448 REMARK 3 L TENSOR REMARK 3 L11: 2.4402 L22: 3.2152 REMARK 3 L33: 9.5602 L12: 0.4613 REMARK 3 L13: -1.7223 L23: -2.8476 REMARK 3 S TENSOR REMARK 3 S11: 0.0095 S12: 0.0602 S13: -0.2478 REMARK 3 S21: 0.3472 S22: 0.0600 S23: 0.1652 REMARK 3 S31: 0.2651 S32: -0.6437 S33: -0.0695 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 137 A 161 REMARK 3 ORIGIN FOR THE GROUP (A): -14.380 -12.707 3.358 REMARK 3 T TENSOR REMARK 3 T11: 0.0000 T22: -0.0001 REMARK 3 T33: 0.0001 T12: 0.0007 REMARK 3 T13: -0.0003 T23: -0.0001 REMARK 3 L TENSOR REMARK 3 L11: 12.4645 L22: 37.9774 REMARK 3 L33: 1.4223 L12: 15.8323 REMARK 3 L13: 3.8687 L23: 2.9242 REMARK 3 S TENSOR REMARK 3 S11: 0.1425 S12: -0.0168 S13: -0.6504 REMARK 3 S21: 0.4705 S22: -0.2459 S23: 0.7831 REMARK 3 S31: 0.8264 S32: -0.1409 S33: 0.1034 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 162 A 173 REMARK 3 ORIGIN FOR THE GROUP (A): -8.851 1.074 -5.864 REMARK 3 T TENSOR REMARK 3 T11: -0.0030 T22: -0.0067 REMARK 3 T33: 0.0106 T12: -0.0333 REMARK 3 T13: 0.0202 T23: -0.0464 REMARK 3 L TENSOR REMARK 3 L11: 0.9405 L22: 1.7782 REMARK 3 L33: 0.3308 L12: -0.5346 REMARK 3 L13: 0.1773 L23: 0.5613 REMARK 3 S TENSOR REMARK 3 S11: 0.0607 S12: 0.0105 S13: -0.1784 REMARK 3 S21: 0.0938 S22: -0.2171 S23: 0.1330 REMARK 3 S31: 0.1620 S32: -0.0830 S33: 0.1564 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 174 A 192 REMARK 3 ORIGIN FOR THE GROUP (A): 15.502 -7.426 -9.182 REMARK 3 T TENSOR REMARK 3 T11: -0.0133 T22: -0.1138 REMARK 3 T33: 0.0098 T12: 0.0748 REMARK 3 T13: 0.0049 T23: -0.0854 REMARK 3 L TENSOR REMARK 3 L11: 7.6998 L22: 2.1461 REMARK 3 L33: 9.4190 L12: -2.2322 REMARK 3 L13: 5.9468 L23: -2.4916 REMARK 3 S TENSOR REMARK 3 S11: 0.3313 S12: 0.7663 S13: -0.5068 REMARK 3 S21: -0.2242 S22: -0.1602 S23: 0.0378 REMARK 3 S31: 0.5331 S32: 0.6985 S33: -0.1711 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 193 A 234 REMARK 3 ORIGIN FOR THE GROUP (A): 1.712 0.126 -3.009 REMARK 3 T TENSOR REMARK 3 T11: 0.0108 T22: -0.1144 REMARK 3 T33: 0.0330 T12: -0.0139 REMARK 3 T13: 0.0099 T23: 0.0001 REMARK 3 L TENSOR REMARK 3 L11: 1.8874 L22: 0.1643 REMARK 3 L33: 1.3514 L12: 0.0582 REMARK 3 L13: 0.5568 L23: 0.4085 REMARK 3 S TENSOR REMARK 3 S11: 0.0496 S12: 0.0178 S13: -0.4049 REMARK 3 S21: 0.0010 S22: -0.0557 S23: 0.1576 REMARK 3 S31: 0.1670 S32: -0.1629 S33: 0.0061 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 235 A 302 REMARK 3 ORIGIN FOR THE GROUP (A): 13.997 4.602 -0.908 REMARK 3 T TENSOR REMARK 3 T11: -0.0026 T22: -0.0962 REMARK 3 T33: 0.0010 T12: 0.0041 REMARK 3 T13: 0.0029 T23: -0.0019 REMARK 3 L TENSOR REMARK 3 L11: 0.9173 L22: 0.2749 REMARK 3 L33: 0.8113 L12: -0.0441 REMARK 3 L13: 0.3836 L23: 0.0274 REMARK 3 S TENSOR REMARK 3 S11: -0.0103 S12: 0.0462 S13: -0.0751 REMARK 3 S21: -0.0077 S22: -0.0097 S23: 0.0134 REMARK 3 S31: 0.0676 S32: 0.0263 S33: 0.0200 REMARK 3 REMARK 3 TLS GROUP : 9 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 303 A 317 REMARK 3 ORIGIN FOR THE GROUP (A): 3.199 -3.487 22.745 REMARK 3 T TENSOR REMARK 3 T11: -0.0568 T22: 0.0067 REMARK 3 T33: 0.0054 T12: -0.0540 REMARK 3 T13: 0.0271 T23: 0.0728 REMARK 3 L TENSOR REMARK 3 L11: 3.5109 L22: 6.3418 REMARK 3 L33: 3.4041 L12: -0.8184 REMARK 3 L13: 0.6830 L23: -1.0207 REMARK 3 S TENSOR REMARK 3 S11: 0.0647 S12: -0.4875 S13: -0.2977 REMARK 3 S21: 0.0670 S22: 0.0567 S23: 0.2944 REMARK 3 S31: 0.3434 S32: -0.5545 S33: -0.1214 REMARK 3 REMARK 3 TLS GROUP : 10 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 318 A 475 REMARK 3 ORIGIN FOR THE GROUP (A): 36.067 -0.723 29.900 REMARK 3 T TENSOR REMARK 3 T11: -0.0485 T22: -0.0349 REMARK 3 T33: -0.0265 T12: 0.0112 REMARK 3 T13: 0.0070 T23: 0.0586 REMARK 3 L TENSOR REMARK 3 L11: 1.1634 L22: 0.3368 REMARK 3 L33: 1.1345 L12: -0.0514 REMARK 3 L13: 0.6491 L23: -0.1957 REMARK 3 S TENSOR REMARK 3 S11: -0.0145 S12: -0.1294 S13: -0.1260 REMARK 3 S21: -0.0003 S22: 0.0210 S23: -0.0158 REMARK 3 S31: -0.0019 S32: 0.0855 S33: -0.0065 REMARK 3 REMARK 3 TLS GROUP : 11 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 476 A 520 REMARK 3 ORIGIN FOR THE GROUP (A): 40.564 10.499 27.018 REMARK 3 T TENSOR REMARK 3 T11: -0.0315 T22: -0.0618 REMARK 3 T33: -0.0458 T12: -0.0465 REMARK 3 T13: -0.0143 T23: 0.0486 REMARK 3 L TENSOR REMARK 3 L11: 1.7790 L22: 0.7590 REMARK 3 L33: 3.1510 L12: 0.1674 REMARK 3 L13: 0.5402 L23: 0.1895 REMARK 3 S TENSOR REMARK 3 S11: -0.0289 S12: 0.0177 S13: 0.1469 REMARK 3 S21: -0.0420 S22: -0.0751 S23: -0.0049 REMARK 3 S31: -0.4057 S32: 0.1831 S33: 0.1039 REMARK 3 REMARK 3 TLS GROUP : 12 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 601 A 601 REMARK 3 ORIGIN FOR THE GROUP (A): 1.935 3.503 4.754 REMARK 3 T TENSOR REMARK 3 T11: -0.0295 T22: -0.0649 REMARK 3 T33: 0.0212 T12: -0.0175 REMARK 3 T13: -0.0162 T23: -0.0210 REMARK 3 L TENSOR REMARK 3 L11: 1.8634 L22: 13.2617 REMARK 3 L33: 4.9364 L12: -3.0762 REMARK 3 L13: -2.5399 L23: 0.7193 REMARK 3 S TENSOR REMARK 3 S11: 0.0077 S12: 0.1930 S13: -0.4064 REMARK 3 S21: -0.1813 S22: -0.2696 S23: 0.7040 REMARK 3 S31: -0.0587 S32: -0.1516 S33: 0.2619 REMARK 3 REMARK 3 TLS GROUP : 13 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 602 A 602 REMARK 3 ORIGIN FOR THE GROUP (A): 7.392 0.264 13.785 REMARK 3 T TENSOR REMARK 3 T11: 0.0289 T22: 0.0080 REMARK 3 T33: 0.0172 T12: -0.0114 REMARK 3 T13: 0.0075 T23: 0.0640 REMARK 3 L TENSOR REMARK 3 L11: 2.5377 L22: 6.9247 REMARK 3 L33: 0.8699 L12: -1.1235 REMARK 3 L13: -0.8553 L23: 2.3121 REMARK 3 S TENSOR REMARK 3 S11: -0.1028 S12: 0.0357 S13: -0.0975 REMARK 3 S21: 0.0685 S22: 0.0090 S23: 0.4340 REMARK 3 S31: -0.3569 S32: -0.4156 S33: 0.0938 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 4QRE COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 17-JUL-14. REMARK 100 THE DEPOSITION ID IS D_1000086417. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-APR-07 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.9 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MAR SCANNER 345 MM PLATE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM 3.2.17 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 58516 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.700 REMARK 200 RESOLUTION RANGE LOW (A) : 21.500 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 94.5 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.78 REMARK 200 COMPLETENESS FOR SHELL (%) : 94.2 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 1.3.2 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.96 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.32 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG3350, TRIS PH 7.9, ETHYLENE GLYCOL, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 32.46600 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 59.58000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 37.83600 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 59.58000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 32.46600 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 37.83600 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -26 REMARK 465 GLY A -25 REMARK 465 HIS A -24 REMARK 465 HIS A -23 REMARK 465 HIS A -22 REMARK 465 HIS A -21 REMARK 465 HIS A -20 REMARK 465 HIS A -19 REMARK 465 ASP A -18 REMARK 465 TYR A -17 REMARK 465 ASP A -16 REMARK 465 ILE A -15 REMARK 465 PRO A -14 REMARK 465 THR A -13 REMARK 465 THR A -12 REMARK 465 GLU A -11 REMARK 465 ASN A -10 REMARK 465 LEU A -9 REMARK 465 TYR A -8 REMARK 465 PHE A -7 REMARK 465 GLN A -6 REMARK 465 GLY A -5 REMARK 465 ALA A -4 REMARK 465 HIS A -3 REMARK 465 MET A -2 REMARK 465 ALA A -1 REMARK 465 SER A 0 REMARK 465 MET A 1 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 C LEU A 339 CD PRO A 340 1.40 REMARK 500 C LEU A 339 CA PRO A 340 1.44 REMARK 500 O LEU A 339 CA PRO A 340 1.54 REMARK 500 CA TYR A 145 O LYS A 149 1.60 REMARK 500 CA LEU A 339 CD PRO A 340 1.75 REMARK 500 OE1 GLN A 40 O HOH A 1080 1.90 REMARK 500 CB TYR A 145 O LYS A 149 1.91 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 PRO A 340 CB PRO A 340 CG 0.319 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 SER A 158 N - CA - C ANGL. DEV. = -21.4 DEGREES REMARK 500 PRO A 340 C - N - CA ANGL. DEV. = -57.1 DEGREES REMARK 500 PRO A 340 C - N - CD ANGL. DEV. = -69.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A 15 47.44 -82.94 REMARK 500 SER A 89 32.03 -92.60 REMARK 500 ASN A 147 -124.04 60.06 REMARK 500 ASP A 157 -77.83 -91.50 REMARK 500 ASN A 229 72.74 -150.41 REMARK 500 ILE A 279 -67.02 -123.65 REMARK 500 ASP A 306 58.66 -149.74 REMARK 500 PRO A 340 -148.15 -154.05 REMARK 500 LEU A 360 -71.90 -81.75 REMARK 500 GLN A 416 71.59 -101.70 REMARK 500 PRO A 440 -32.46 -39.85 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 ASN A 147 GLY A 148 148.15 REMARK 500 GLY A 148 LYS A 149 -79.48 REMARK 500 LYS A 149 ILE A 150 39.19 REMARK 500 PRO A 340 PHE A 341 -144.08 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 603 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 THR A 5 OG1 REMARK 620 2 HOH A 726 O 91.8 REMARK 620 3 HOH A 852 O 77.1 166.5 REMARK 620 4 HOH A1211 O 92.0 90.9 81.9 REMARK 620 5 HOH A1212 O 80.4 79.2 106.1 167.3 REMARK 620 6 HOH A1213 O 170.1 93.5 98.6 96.2 92.4 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 604 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER A 310 OG REMARK 620 2 ATP A 602 O2A 175.1 REMARK 620 3 ATP A 602 O2G 85.7 98.2 REMARK 620 4 ATP A 602 O2B 101.6 81.9 83.7 REMARK 620 5 HOH A1269 O 86.3 90.6 89.9 169.3 REMARK 620 6 HOH A1270 O 84.9 91.8 166.8 89.2 98.7 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 3BG A 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ATP A 602 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 603 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 604 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4QRD RELATED DB: PDB DBREF 4QRE A 1 520 UNP W8U1H8 W8U1H8_STAAU 1 520 SEQADV 4QRE MET A -26 UNP W8U1H8 EXPRESSION TAG SEQADV 4QRE GLY A -25 UNP W8U1H8 EXPRESSION TAG SEQADV 4QRE HIS A -24 UNP W8U1H8 EXPRESSION TAG SEQADV 4QRE HIS A -23 UNP W8U1H8 EXPRESSION TAG SEQADV 4QRE HIS A -22 UNP W8U1H8 EXPRESSION TAG SEQADV 4QRE HIS A -21 UNP W8U1H8 EXPRESSION TAG SEQADV 4QRE HIS A -20 UNP W8U1H8 EXPRESSION TAG SEQADV 4QRE HIS A -19 UNP W8U1H8 EXPRESSION TAG SEQADV 4QRE ASP A -18 UNP W8U1H8 EXPRESSION TAG SEQADV 4QRE TYR A -17 UNP W8U1H8 EXPRESSION TAG SEQADV 4QRE ASP A -16 UNP W8U1H8 EXPRESSION TAG SEQADV 4QRE ILE A -15 UNP W8U1H8 EXPRESSION TAG SEQADV 4QRE PRO A -14 UNP W8U1H8 EXPRESSION TAG SEQADV 4QRE THR A -13 UNP W8U1H8 EXPRESSION TAG SEQADV 4QRE THR A -12 UNP W8U1H8 EXPRESSION TAG SEQADV 4QRE GLU A -11 UNP W8U1H8 EXPRESSION TAG SEQADV 4QRE ASN A -10 UNP W8U1H8 EXPRESSION TAG SEQADV 4QRE LEU A -9 UNP W8U1H8 EXPRESSION TAG SEQADV 4QRE TYR A -8 UNP W8U1H8 EXPRESSION TAG SEQADV 4QRE PHE A -7 UNP W8U1H8 EXPRESSION TAG SEQADV 4QRE GLN A -6 UNP W8U1H8 EXPRESSION TAG SEQADV 4QRE GLY A -5 UNP W8U1H8 EXPRESSION TAG SEQADV 4QRE ALA A -4 UNP W8U1H8 EXPRESSION TAG SEQADV 4QRE HIS A -3 UNP W8U1H8 EXPRESSION TAG SEQADV 4QRE MET A -2 UNP W8U1H8 EXPRESSION TAG SEQADV 4QRE ALA A -1 UNP W8U1H8 EXPRESSION TAG SEQADV 4QRE SER A 0 UNP W8U1H8 EXPRESSION TAG SEQRES 1 A 547 MET GLY HIS HIS HIS HIS HIS HIS ASP TYR ASP ILE PRO SEQRES 2 A 547 THR THR GLU ASN LEU TYR PHE GLN GLY ALA HIS MET ALA SEQRES 3 A 547 SER MET ALA LYS GLU THR PHE TYR ILE THR THR PRO ILE SEQRES 4 A 547 TYR TYR PRO SER GLY ASN LEU HIS ILE GLY HIS ALA TYR SEQRES 5 A 547 SER THR VAL ALA GLY ASP VAL ILE ALA ARG TYR LYS ARG SEQRES 6 A 547 MET GLN GLY TYR ASP VAL ARG TYR LEU THR GLY THR ASP SEQRES 7 A 547 GLU HIS GLY GLN LYS ILE GLN GLU LYS ALA GLN LYS ALA SEQRES 8 A 547 GLY LYS THR GLU ILE GLU TYR LEU ASP GLU MET ILE ALA SEQRES 9 A 547 GLY ILE LYS GLN LEU TRP ALA LYS LEU GLU ILE SER ASN SEQRES 10 A 547 ASP ASP PHE ILE ARG THR THR GLU GLU ARG HIS LYS HIS SEQRES 11 A 547 VAL VAL GLU GLN VAL PHE GLU ARG LEU LEU LYS GLN GLY SEQRES 12 A 547 ASP ILE TYR LEU GLY GLU TYR GLU GLY TRP TYR SER VAL SEQRES 13 A 547 PRO ASP GLU THR TYR TYR THR GLU SER GLN LEU VAL ASP SEQRES 14 A 547 PRO GLN TYR GLU ASN GLY LYS ILE ILE GLY GLY LYS SER SEQRES 15 A 547 PRO ASP SER GLY HIS GLU VAL GLU LEU VAL LYS GLU GLU SEQRES 16 A 547 SER TYR PHE PHE ASN ILE SER LYS TYR THR ASP ARG LEU SEQRES 17 A 547 LEU GLU PHE TYR ASP GLN ASN PRO ASP PHE ILE GLN PRO SEQRES 18 A 547 PRO SER ARG LYS ASN GLU MET ILE ASN ASN PHE ILE LYS SEQRES 19 A 547 PRO GLY LEU ALA ASP LEU ALA VAL SER ARG THR SER PHE SEQRES 20 A 547 ASN TRP GLY VAL HIS VAL PRO SER ASN PRO LYS HIS VAL SEQRES 21 A 547 VAL TYR VAL TRP ILE ASP ALA LEU VAL ASN TYR ILE SER SEQRES 22 A 547 ALA LEU GLY TYR LEU SER ASP ASP GLU SER LEU PHE ASN SEQRES 23 A 547 LYS TYR TRP PRO ALA ASP ILE HIS LEU MET ALA LYS GLU SEQRES 24 A 547 ILE VAL ARG PHE HIS SER ILE ILE TRP PRO ILE LEU LEU SEQRES 25 A 547 MET ALA LEU ASP LEU PRO LEU PRO LYS LYS VAL PHE ALA SEQRES 26 A 547 HIS GLY TRP ILE LEU MET LYS ASP GLY LYS MET SER LYS SEQRES 27 A 547 SER LYS GLY ASN VAL VAL ASP PRO ASN ILE LEU ILE ASP SEQRES 28 A 547 ARG TYR GLY LEU ASP ALA THR ARG TYR TYR LEU MET ARG SEQRES 29 A 547 GLU LEU PRO PHE GLY SER ASP GLY VAL PHE THR PRO GLU SEQRES 30 A 547 ALA PHE VAL GLU ARG THR ASN PHE ASP LEU ALA ASN ASP SEQRES 31 A 547 LEU GLY ASN LEU VAL ASN ARG THR ILE SER MET VAL ASN SEQRES 32 A 547 LYS TYR PHE ASP GLY GLU LEU PRO ALA TYR GLN GLY PRO SEQRES 33 A 547 LEU HIS GLU LEU ASP GLU GLU MET GLU ALA MET ALA LEU SEQRES 34 A 547 GLU THR VAL LYS SER TYR THR GLU SER MET GLU SER LEU SEQRES 35 A 547 GLN PHE SER VAL ALA LEU SER THR VAL TRP LYS PHE ILE SEQRES 36 A 547 SER ARG THR ASN LYS TYR ILE ASP GLU THR THR PRO TRP SEQRES 37 A 547 VAL LEU ALA LYS ASP ASP SER GLN LYS ASP MET LEU GLY SEQRES 38 A 547 ASN VAL MET ALA HIS LEU VAL GLU ASN ILE ARG TYR ALA SEQRES 39 A 547 ALA VAL LEU LEU ARG PRO PHE LEU THR HIS ALA PRO LYS SEQRES 40 A 547 GLU ILE PHE GLU GLN LEU ASN ILE ASN ASN PRO GLN PHE SEQRES 41 A 547 MET GLU PHE SER SER LEU GLU GLN TYR GLY VAL LEU THR SEQRES 42 A 547 GLU SER ILE MET VAL THR GLY GLN PRO LYS PRO ILE PHE SEQRES 43 A 547 PRO HET 3BG A 601 38 HET ATP A 602 31 HET MG A 603 1 HET MG A 604 1 HETNAM 3BG 1-(4-{4-[(1H-BENZIMIDAZOL-2-YLMETHYL)AMINO]-6-(4,5- HETNAM 2 3BG DIMETHOXY-2-METHYLPHENOXY)PYRIMIDIN-2-YL}PIPERAZIN-1- HETNAM 3 3BG YL)ETHANONE HETNAM ATP ADENOSINE-5'-TRIPHOSPHATE HETNAM MG MAGNESIUM ION FORMUL 2 3BG C27 H31 N7 O4 FORMUL 3 ATP C10 H16 N5 O13 P3 FORMUL 4 MG 2(MG 2+) FORMUL 6 HOH *615(H2 O) HELIX 1 1 HIS A 20 GLN A 40 1 21 HELIX 2 2 GLY A 54 ALA A 64 1 11 HELIX 3 3 THR A 67 LEU A 86 1 20 HELIX 4 4 GLU A 98 GLY A 116 1 19 HELIX 5 5 THR A 136 LEU A 140 5 5 HELIX 6 6 ILE A 174 LYS A 176 5 3 HELIX 7 7 TYR A 177 ASN A 188 1 12 HELIX 8 8 PRO A 195 PHE A 205 1 11 HELIX 9 9 TYR A 235 VAL A 242 1 8 HELIX 10 10 VAL A 242 ALA A 247 1 6 HELIX 11 11 GLU A 255 TRP A 262 1 8 HELIX 12 12 ILE A 273 ILE A 279 1 7 HELIX 13 13 ILE A 279 LEU A 288 1 10 HELIX 14 14 SER A 310 GLY A 314 5 5 HELIX 15 15 ASP A 318 GLY A 327 1 10 HELIX 16 16 GLY A 327 LEU A 339 1 13 HELIX 17 17 THR A 348 LEU A 360 1 13 HELIX 18 18 ASN A 362 ASP A 380 1 19 HELIX 19 19 LEU A 393 SER A 414 1 22 HELIX 20 20 GLN A 416 THR A 439 1 24 HELIX 21 21 THR A 439 ALA A 444 1 6 HELIX 22 22 LYS A 445 SER A 448 5 4 HELIX 23 23 GLN A 449 ARG A 472 1 24 HELIX 24 24 HIS A 477 ASN A 487 1 11 HELIX 25 25 ASN A 490 GLU A 500 5 11 SHEET 1 A 6 ASP A 92 ARG A 95 0 SHEET 2 A 6 ASP A 43 THR A 50 1 N THR A 50 O ILE A 94 SHEET 3 A 6 THR A 5 TYR A 13 1 N ILE A 8 O ARG A 45 SHEET 4 A 6 ILE A 266 ALA A 270 1 O LEU A 268 N THR A 9 SHEET 5 A 6 VAL A 296 HIS A 299 1 O PHE A 297 N HIS A 267 SHEET 6 A 6 ILE A 192 GLN A 193 1 N GLN A 193 O ALA A 298 SHEET 1 B 4 THR A 133 TYR A 135 0 SHEET 2 B 4 ILE A 118 SER A 128 -1 N TRP A 126 O TYR A 135 SHEET 3 B 4 GLU A 163 PHE A 172 -1 O PHE A 171 N TYR A 119 SHEET 4 B 4 LEU A 213 ALA A 214 -1 O LEU A 213 N PHE A 172 SHEET 1 C 2 VAL A 141 GLN A 144 0 SHEET 2 C 2 GLY A 152 LYS A 154 -1 O LYS A 154 N VAL A 141 SHEET 1 D 3 SER A 216 ARG A 217 0 SHEET 2 D 3 ASN A 229 VAL A 234 -1 O VAL A 233 N ARG A 217 SHEET 3 D 3 HIS A 225 VAL A 226 -1 N VAL A 226 O HIS A 232 SHEET 1 E 3 GLY A 307 LYS A 308 0 SHEET 2 E 3 ILE A 302 MET A 304 -1 N MET A 304 O GLY A 307 SHEET 3 E 3 GLY A 345 VAL A 346 1 O GLY A 345 N LEU A 303 SHEET 1 F 2 GLU A 382 LEU A 383 0 SHEET 2 F 2 ILE A 509 MET A 510 -1 O ILE A 509 N LEU A 383 LINK OG1 THR A 5 MG MG A 603 1555 1555 2.52 LINK OG SER A 310 MG MG A 604 1555 1555 2.11 LINK O2A ATP A 602 MG MG A 604 1555 1555 2.05 LINK O2G ATP A 602 MG MG A 604 1555 1555 2.20 LINK O2B ATP A 602 MG MG A 604 1555 1555 1.96 LINK MG MG A 603 O HOH A 726 1555 1555 2.46 LINK MG MG A 603 O HOH A 852 1555 1555 2.56 LINK MG MG A 603 O HOH A1211 1555 1555 2.38 LINK MG MG A 603 O HOH A1212 1555 1555 2.48 LINK MG MG A 603 O HOH A1213 1555 1555 2.31 LINK MG MG A 604 O HOH A1269 1555 1555 2.07 LINK MG MG A 604 O HOH A1270 1555 1555 1.93 CISPEP 1 GLN A 193 PRO A 194 0 -8.15 CISPEP 2 PRO A 208 GLY A 209 0 -11.25 CISPEP 3 TRP A 262 PRO A 263 0 3.62 CISPEP 4 ASP A 306 GLY A 307 0 -23.93 CISPEP 5 PHE A 519 PRO A 520 0 4.73 SITE 1 AC1 23 PRO A 11 ILE A 12 TYR A 14 ASP A 51 SITE 2 AC1 23 HIS A 53 GLY A 54 THR A 133 TYR A 134 SITE 3 AC1 23 PHE A 220 VAL A 234 TYR A 235 VAL A 236 SITE 4 AC1 23 TRP A 237 ASP A 239 ASN A 243 TYR A 244 SITE 5 AC1 23 ILE A 273 PHE A 276 ATP A 602 HOH A1216 SITE 6 AC1 23 HOH A1222 HOH A1223 HOH A1279 SITE 1 AC2 29 PRO A 11 TYR A 13 HIS A 20 GLY A 22 SITE 2 AC2 29 HIS A 23 SER A 26 ALA A 270 GLU A 272 SITE 3 AC2 29 ILE A 273 HIS A 299 GLY A 300 TRP A 301 SITE 4 AC2 29 ILE A 302 LYS A 308 MET A 309 SER A 310 SITE 5 AC2 29 LYS A 311 3BG A 601 MG A 604 HOH A1221 SITE 6 AC2 29 HOH A1224 HOH A1228 HOH A1269 HOH A1270 SITE 7 AC2 29 HOH A1272 HOH A1273 HOH A1274 HOH A1277 SITE 8 AC2 29 HOH A1278 SITE 1 AC3 6 THR A 5 HOH A 726 HOH A 852 HOH A1211 SITE 2 AC3 6 HOH A1212 HOH A1213 SITE 1 AC4 4 SER A 310 ATP A 602 HOH A1269 HOH A1270 CRYST1 64.932 75.672 119.160 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015401 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013215 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008392 0.00000