data_4QT2 # _entry.id 4QT2 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.381 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4QT2 pdb_00004qt2 10.2210/pdb4qt2/pdb RCSB RCSB086477 ? ? WWPDB D_1000086477 ? ? # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 4QT3 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.entry_id 4QT2 _pdbx_database_status.methods_development_category ? _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBJ _pdbx_database_status.recvd_initial_deposition_date 2014-07-07 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Bianchin, A.' 1 'Allemand, F.' 2 'Bell, A.' 3 'Chubb, A.J.' 4 'Guichou, J.-F.' 5 # _citation.id primary _citation.title 'Two crystal structures of the FK506-binding domain of Plasmodium falciparum FKBP35 in complex with rapamycin at high resolution' _citation.journal_abbrev 'Acta Crystallogr.,Sect.D' _citation.journal_volume 71 _citation.page_first 1319 _citation.page_last 1327 _citation.year 2015 _citation.journal_id_ASTM ABCRE6 _citation.country DK _citation.journal_id_ISSN 0907-4449 _citation.journal_id_CSD 0766 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 26057671 _citation.pdbx_database_id_DOI 10.1107/S1399004715006239 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Bianchin, A.' 1 ? primary 'Allemand, F.' 2 ? primary 'Bell, A.' 3 ? primary 'Chubb, A.J.' 4 ? primary 'Guichou, J.-F.' 5 ? # _cell.length_a 35.812 _cell.length_b 48.700 _cell.length_c 58.933 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 90.000 _cell.entry_id 4QT2 _cell.pdbx_unique_axis ? _cell.Z_PDB 4 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.entry_id 4QT2 _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.Int_Tables_number 19 _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'FK506-binding protein (FKBP)-type peptidyl-propyl isomerase' 14828.720 1 5.2.1.8 ? 'UNP residues 7-127' ? 2 non-polymer syn IMIDAZOLE 69.085 1 ? ? ? ? 3 non-polymer syn 'RAPAMYCIN IMMUNOSUPPRESSANT DRUG' 914.172 1 ? ? ? ? 4 water nat water 18.015 99 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;FEKVELTADGGVIKTILKKGDEGEENIPKKGNEVTVHYVGKLESTGKVFDSSFDRNVPFKFHLEQGEVIKGWDICVSSMR KNEKCLVRIESMYGYGDEGCGESIPGNSVLLFEIELLSFRELETSHHHHHH ; _entity_poly.pdbx_seq_one_letter_code_can ;FEKVELTADGGVIKTILKKGDEGEENIPKKGNEVTVHYVGKLESTGKVFDSSFDRNVPFKFHLEQGEVIKGWDICVSSMR KNEKCLVRIESMYGYGDEGCGESIPGNSVLLFEIELLSFRELETSHHHHHH ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 PHE n 1 2 GLU n 1 3 LYS n 1 4 VAL n 1 5 GLU n 1 6 LEU n 1 7 THR n 1 8 ALA n 1 9 ASP n 1 10 GLY n 1 11 GLY n 1 12 VAL n 1 13 ILE n 1 14 LYS n 1 15 THR n 1 16 ILE n 1 17 LEU n 1 18 LYS n 1 19 LYS n 1 20 GLY n 1 21 ASP n 1 22 GLU n 1 23 GLY n 1 24 GLU n 1 25 GLU n 1 26 ASN n 1 27 ILE n 1 28 PRO n 1 29 LYS n 1 30 LYS n 1 31 GLY n 1 32 ASN n 1 33 GLU n 1 34 VAL n 1 35 THR n 1 36 VAL n 1 37 HIS n 1 38 TYR n 1 39 VAL n 1 40 GLY n 1 41 LYS n 1 42 LEU n 1 43 GLU n 1 44 SER n 1 45 THR n 1 46 GLY n 1 47 LYS n 1 48 VAL n 1 49 PHE n 1 50 ASP n 1 51 SER n 1 52 SER n 1 53 PHE n 1 54 ASP n 1 55 ARG n 1 56 ASN n 1 57 VAL n 1 58 PRO n 1 59 PHE n 1 60 LYS n 1 61 PHE n 1 62 HIS n 1 63 LEU n 1 64 GLU n 1 65 GLN n 1 66 GLY n 1 67 GLU n 1 68 VAL n 1 69 ILE n 1 70 LYS n 1 71 GLY n 1 72 TRP n 1 73 ASP n 1 74 ILE n 1 75 CYS n 1 76 VAL n 1 77 SER n 1 78 SER n 1 79 MET n 1 80 ARG n 1 81 LYS n 1 82 ASN n 1 83 GLU n 1 84 LYS n 1 85 CYS n 1 86 LEU n 1 87 VAL n 1 88 ARG n 1 89 ILE n 1 90 GLU n 1 91 SER n 1 92 MET n 1 93 TYR n 1 94 GLY n 1 95 TYR n 1 96 GLY n 1 97 ASP n 1 98 GLU n 1 99 GLY n 1 100 CYS n 1 101 GLY n 1 102 GLU n 1 103 SER n 1 104 ILE n 1 105 PRO n 1 106 GLY n 1 107 ASN n 1 108 SER n 1 109 VAL n 1 110 LEU n 1 111 LEU n 1 112 PHE n 1 113 GLU n 1 114 ILE n 1 115 GLU n 1 116 LEU n 1 117 LEU n 1 118 SER n 1 119 PHE n 1 120 ARG n 1 121 GLU n 1 122 LEU n 1 123 GLU n 1 124 THR n 1 125 SER n 1 126 HIS n 1 127 HIS n 1 128 HIS n 1 129 HIS n 1 130 HIS n 1 131 HIS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'FKBP35, PFL2275c' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Plasmodium falciparum 3D7' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 36329 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q8I4V8_PLAF7 _struct_ref.pdbx_db_accession Q8I4V8 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;FEKVELTADGGVIKTILKKGDEGEENIPKKGNEVTVHYVGKLESTGKVFDSSFDRNVPFKFHLEQGEVIKGWDICVSSMR KNEKCLVRIESMYGYGDEGCGESIPGNSVLLFEIELLSFRE ; _struct_ref.pdbx_align_begin 7 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 4QT2 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 121 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q8I4V8 _struct_ref_seq.db_align_beg 7 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 127 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 7 _struct_ref_seq.pdbx_auth_seq_align_end 127 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4QT2 LEU A 122 ? UNP Q8I4V8 ? ? 'expression tag' 128 1 1 4QT2 GLU A 123 ? UNP Q8I4V8 ? ? 'expression tag' 129 2 1 4QT2 THR A 124 ? UNP Q8I4V8 ? ? 'expression tag' 130 3 1 4QT2 SER A 125 ? UNP Q8I4V8 ? ? 'expression tag' 131 4 1 4QT2 HIS A 126 ? UNP Q8I4V8 ? ? 'expression tag' 132 5 1 4QT2 HIS A 127 ? UNP Q8I4V8 ? ? 'expression tag' 133 6 1 4QT2 HIS A 128 ? UNP Q8I4V8 ? ? 'expression tag' 134 7 1 4QT2 HIS A 129 ? UNP Q8I4V8 ? ? 'expression tag' 135 8 1 4QT2 HIS A 130 ? UNP Q8I4V8 ? ? 'expression tag' 136 9 1 4QT2 HIS A 131 ? UNP Q8I4V8 ? ? 'expression tag' 137 10 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 IMD non-polymer . IMIDAZOLE ? 'C3 H5 N2 1' 69.085 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 RAP non-polymer . 'RAPAMYCIN IMMUNOSUPPRESSANT DRUG' ? 'C51 H79 N O13' 914.172 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.entry_id 4QT2 _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? _exptl_crystal.density_Matthews 1.73 _exptl_crystal.density_diffrn ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_percent_sol 29.02 _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.pH 7.0 _exptl_crystal_grow.temp 291 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_details '0.1M MIB, 25% PEG1500, pH 7.0, VAPOR DIFFUSION, SITTING DROP, temperature 291K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector PIXEL _diffrn_detector.type 'PSI PILATUS 6M' _diffrn_detector.pdbx_collection_date 2014-05-16 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator 'Yale mirrors' _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.8726 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ESRF BEAMLINE ID23-2' _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.8726 _diffrn_source.pdbx_synchrotron_site ESRF _diffrn_source.pdbx_synchrotron_beamline ID23-2 # _reflns.entry_id 4QT2 _reflns.observed_criterion_sigma_F 2.0 _reflns.observed_criterion_sigma_I 6.6 _reflns.d_resolution_high 1.44 _reflns.d_resolution_low 37.54 _reflns.number_all ? _reflns.number_obs 19370 _reflns.percent_possible_obs 97.8 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _refine.entry_id 4QT2 _refine.ls_d_res_high 1.4400 _refine.ls_d_res_low 37.5400 _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 97.7700 _refine.ls_number_reflns_obs 18930 _refine.ls_number_reflns_all 19370 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS U VALUES: REFINED INDIVIDUALLY' _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1531 _refine.ls_R_factor_R_work 0.1498 _refine.ls_wR_factor_R_work ? _refine.ls_R_factor_R_free 0.2156 _refine.ls_wR_factor_R_free ? _refine.ls_percent_reflns_R_free 5.0000 _refine.ls_number_reflns_R_free 940 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 16.6540 _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] -0.7600 _refine.aniso_B[2][2] 0.7600 _refine.aniso_B[3][3] -0.0000 _refine.aniso_B[1][2] -0.0000 _refine.aniso_B[1][3] 0.0000 _refine.aniso_B[2][3] 0.0000 _refine.correlation_coeff_Fo_to_Fc 0.9730 _refine.correlation_coeff_Fo_to_Fc_free 0.9470 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_overall_ESU_R 0.0870 _refine.pdbx_overall_ESU_R_Free 0.0810 _refine.overall_SU_ML 0.0550 _refine.overall_SU_B 3.2120 _refine.solvent_model_details MASK _refine.pdbx_solvent_vdw_probe_radii 1.2000 _refine.pdbx_solvent_ion_probe_radii 0.8000 _refine.pdbx_solvent_shrinkage_radii 0.8000 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_starting_model 2VN1 _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set ? _refine.B_iso_max 51.590 _refine.B_iso_min 7.570 _refine.pdbx_overall_phase_error ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.pdbx_ls_sigma_I ? _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 959 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 70 _refine_hist.number_atoms_solvent 99 _refine_hist.number_atoms_total 1128 _refine_hist.d_res_high 1.4400 _refine_hist.d_res_low 37.5400 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id r_bond_refined_d 1099 0.012 0.019 ? ? 'X-RAY DIFFRACTION' r_bond_other_d 1079 0.001 0.020 ? ? 'X-RAY DIFFRACTION' r_angle_refined_deg 1487 1.813 2.046 ? ? 'X-RAY DIFFRACTION' r_angle_other_deg 2520 1.493 3.001 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_1_deg 137 6.560 5.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_2_deg 48 30.680 25.208 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_3_deg 203 14.164 15.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_4_deg 5 15.409 15.000 ? ? 'X-RAY DIFFRACTION' r_chiral_restr 167 0.712 0.200 ? ? 'X-RAY DIFFRACTION' r_gen_planes_refined 1190 0.005 0.020 ? ? 'X-RAY DIFFRACTION' r_gen_planes_other 226 0.002 0.020 ? ? 'X-RAY DIFFRACTION' r_mcbond_it 506 1.766 1.428 ? ? 'X-RAY DIFFRACTION' r_mcbond_other 505 1.755 1.425 ? ? 'X-RAY DIFFRACTION' r_mcangle_it 636 2.076 2.149 ? ? 'X-RAY DIFFRACTION' r_rigid_bond_restr 2178 6.426 3.000 ? ? 'X-RAY DIFFRACTION' r_sphericity_free 40 25.273 5.000 ? ? 'X-RAY DIFFRACTION' r_sphericity_bonded 2210 6.536 5.000 ? ? 'X-RAY DIFFRACTION' # _refine_ls_shell.d_res_high 1.4370 _refine_ls_shell.d_res_low 1.4750 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 78.1200 _refine_ls_shell.number_reflns_R_work 1054 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.2560 _refine_ls_shell.R_factor_R_free 0.3750 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 42 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all 1096 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.redundancy_reflns_obs ? # _struct.entry_id 4QT2 _struct.title 'Crystal Structure of the FK506-Binding Domain of Plasmodium Falciparum FKBP35 in complex with Rapamycin' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4QT2 _struct_keywords.pdbx_keywords ISOMERASE _struct_keywords.text 'PPiase, enzyme, rapamycin, FKBP35, Isomerase' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 52 ? ASN A 56 ? SER A 58 ASN A 62 1 ? 5 HELX_P HELX_P2 2 ILE A 69 ? SER A 77 ? ILE A 75 SER A 83 1 ? 9 HELX_P HELX_P3 3 SER A 91 ? GLY A 94 ? SER A 97 GLY A 100 5 ? 4 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 6 ? B ? 6 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel B 5 6 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 LYS A 3 ? GLU A 5 ? LYS A 9 GLU A 11 A 2 VAL A 12 ? LYS A 18 ? VAL A 18 LYS A 24 A 3 LYS A 84 ? ILE A 89 ? LYS A 90 ILE A 95 A 4 LEU A 110 ? ARG A 120 ? LEU A 116 ARG A 126 A 5 GLU A 33 ? LEU A 42 ? GLU A 39 LEU A 48 A 6 VAL A 48 ? SER A 51 ? VAL A 54 SER A 57 B 1 LYS A 3 ? GLU A 5 ? LYS A 9 GLU A 11 B 2 VAL A 12 ? LYS A 18 ? VAL A 18 LYS A 24 B 3 LYS A 84 ? ILE A 89 ? LYS A 90 ILE A 95 B 4 LEU A 110 ? ARG A 120 ? LEU A 116 ARG A 126 B 5 GLU A 33 ? LEU A 42 ? GLU A 39 LEU A 48 B 6 PHE A 59 ? HIS A 62 ? PHE A 65 HIS A 68 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N VAL A 4 ? N VAL A 10 O LYS A 14 ? O LYS A 20 A 2 3 N THR A 15 ? N THR A 21 O LEU A 86 ? O LEU A 92 A 3 4 N VAL A 87 ? N VAL A 93 O PHE A 112 ? O PHE A 118 A 4 5 O LEU A 111 ? O LEU A 117 N LYS A 41 ? N LYS A 47 A 5 6 N GLY A 40 ? N GLY A 46 O ASP A 50 ? O ASP A 56 B 1 2 N VAL A 4 ? N VAL A 10 O LYS A 14 ? O LYS A 20 B 2 3 N THR A 15 ? N THR A 21 O LEU A 86 ? O LEU A 92 B 3 4 N VAL A 87 ? N VAL A 93 O PHE A 112 ? O PHE A 118 B 4 5 O LEU A 111 ? O LEU A 117 N LYS A 41 ? N LYS A 47 B 5 6 N VAL A 34 ? N VAL A 40 O PHE A 61 ? O PHE A 67 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A IMD 201 ? 3 'BINDING SITE FOR RESIDUE IMD A 201' AC2 Software A RAP 202 ? 15 'BINDING SITE FOR RESIDUE RAP A 202' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 3 GLU A 64 ? GLU A 70 . ? 1_555 ? 2 AC1 3 LYS A 70 ? LYS A 76 . ? 1_555 ? 3 AC1 3 HOH D . ? HOH A 362 . ? 1_555 ? 4 AC2 15 LEU A 17 ? LEU A 23 . ? 3_555 ? 5 AC2 15 TYR A 38 ? TYR A 44 . ? 1_555 ? 6 AC2 15 PHE A 49 ? PHE A 55 . ? 1_555 ? 7 AC2 15 ASP A 50 ? ASP A 56 . ? 1_555 ? 8 AC2 15 PHE A 59 ? PHE A 65 . ? 1_555 ? 9 AC2 15 GLY A 66 ? GLY A 72 . ? 1_555 ? 10 AC2 15 GLU A 67 ? GLU A 73 . ? 1_555 ? 11 AC2 15 VAL A 68 ? VAL A 74 . ? 1_555 ? 12 AC2 15 ILE A 69 ? ILE A 75 . ? 1_555 ? 13 AC2 15 TRP A 72 ? TRP A 78 . ? 1_555 ? 14 AC2 15 TYR A 95 ? TYR A 101 . ? 1_555 ? 15 AC2 15 ILE A 104 ? ILE A 110 . ? 1_555 ? 16 AC2 15 GLU A 113 ? GLU A 119 . ? 3_555 ? 17 AC2 15 HOH D . ? HOH A 377 . ? 1_555 ? 18 AC2 15 HOH D . ? HOH A 392 . ? 1_555 ? # _atom_sites.entry_id 4QT2 _atom_sites.fract_transf_matrix[1][1] 0.027924 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] -0.000000 _atom_sites.fract_transf_matrix[2][2] 0.020534 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] -0.000000 _atom_sites.fract_transf_matrix[3][3] 0.016968 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 PHE 1 7 7 PHE PHE A . n A 1 2 GLU 2 8 8 GLU GLU A . n A 1 3 LYS 3 9 9 LYS LYS A . n A 1 4 VAL 4 10 10 VAL VAL A . n A 1 5 GLU 5 11 11 GLU GLU A . n A 1 6 LEU 6 12 12 LEU LEU A . n A 1 7 THR 7 13 13 THR THR A . n A 1 8 ALA 8 14 14 ALA ALA A . n A 1 9 ASP 9 15 15 ASP ASP A . n A 1 10 GLY 10 16 16 GLY GLY A . n A 1 11 GLY 11 17 17 GLY GLY A . n A 1 12 VAL 12 18 18 VAL VAL A . n A 1 13 ILE 13 19 19 ILE ILE A . n A 1 14 LYS 14 20 20 LYS LYS A . n A 1 15 THR 15 21 21 THR THR A . n A 1 16 ILE 16 22 22 ILE ILE A . n A 1 17 LEU 17 23 23 LEU LEU A . n A 1 18 LYS 18 24 24 LYS LYS A . n A 1 19 LYS 19 25 25 LYS LYS A . n A 1 20 GLY 20 26 26 GLY GLY A . n A 1 21 ASP 21 27 27 ASP ASP A . n A 1 22 GLU 22 28 28 GLU GLU A . n A 1 23 GLY 23 29 29 GLY GLY A . n A 1 24 GLU 24 30 30 GLU GLU A . n A 1 25 GLU 25 31 31 GLU GLU A . n A 1 26 ASN 26 32 32 ASN ASN A . n A 1 27 ILE 27 33 33 ILE ILE A . n A 1 28 PRO 28 34 34 PRO PRO A . n A 1 29 LYS 29 35 35 LYS LYS A . n A 1 30 LYS 30 36 36 LYS LYS A . n A 1 31 GLY 31 37 37 GLY GLY A . n A 1 32 ASN 32 38 38 ASN ASN A . n A 1 33 GLU 33 39 39 GLU GLU A . n A 1 34 VAL 34 40 40 VAL VAL A . n A 1 35 THR 35 41 41 THR THR A . n A 1 36 VAL 36 42 42 VAL VAL A . n A 1 37 HIS 37 43 43 HIS HIS A . n A 1 38 TYR 38 44 44 TYR TYR A . n A 1 39 VAL 39 45 45 VAL VAL A . n A 1 40 GLY 40 46 46 GLY GLY A . n A 1 41 LYS 41 47 47 LYS LYS A . n A 1 42 LEU 42 48 48 LEU LEU A . n A 1 43 GLU 43 49 49 GLU GLU A . n A 1 44 SER 44 50 50 SER SER A . n A 1 45 THR 45 51 51 THR THR A . n A 1 46 GLY 46 52 52 GLY GLY A . n A 1 47 LYS 47 53 53 LYS LYS A . n A 1 48 VAL 48 54 54 VAL VAL A . n A 1 49 PHE 49 55 55 PHE PHE A . n A 1 50 ASP 50 56 56 ASP ASP A . n A 1 51 SER 51 57 57 SER SER A . n A 1 52 SER 52 58 58 SER SER A . n A 1 53 PHE 53 59 59 PHE PHE A . n A 1 54 ASP 54 60 60 ASP ASP A . n A 1 55 ARG 55 61 61 ARG ARG A . n A 1 56 ASN 56 62 62 ASN ASN A . n A 1 57 VAL 57 63 63 VAL VAL A . n A 1 58 PRO 58 64 64 PRO PRO A . n A 1 59 PHE 59 65 65 PHE PHE A . n A 1 60 LYS 60 66 66 LYS LYS A . n A 1 61 PHE 61 67 67 PHE PHE A . n A 1 62 HIS 62 68 68 HIS HIS A . n A 1 63 LEU 63 69 69 LEU LEU A . n A 1 64 GLU 64 70 70 GLU GLU A . n A 1 65 GLN 65 71 71 GLN GLN A . n A 1 66 GLY 66 72 72 GLY GLY A . n A 1 67 GLU 67 73 73 GLU GLU A . n A 1 68 VAL 68 74 74 VAL VAL A . n A 1 69 ILE 69 75 75 ILE ILE A . n A 1 70 LYS 70 76 76 LYS LYS A . n A 1 71 GLY 71 77 77 GLY GLY A . n A 1 72 TRP 72 78 78 TRP TRP A . n A 1 73 ASP 73 79 79 ASP ASP A . n A 1 74 ILE 74 80 80 ILE ILE A . n A 1 75 CYS 75 81 81 CYS CYS A . n A 1 76 VAL 76 82 82 VAL VAL A . n A 1 77 SER 77 83 83 SER SER A . n A 1 78 SER 78 84 84 SER SER A . n A 1 79 MET 79 85 85 MET MET A . n A 1 80 ARG 80 86 86 ARG ARG A . n A 1 81 LYS 81 87 87 LYS LYS A . n A 1 82 ASN 82 88 88 ASN ASN A . n A 1 83 GLU 83 89 89 GLU GLU A . n A 1 84 LYS 84 90 90 LYS LYS A . n A 1 85 CYS 85 91 91 CYS CYS A . n A 1 86 LEU 86 92 92 LEU LEU A . n A 1 87 VAL 87 93 93 VAL VAL A . n A 1 88 ARG 88 94 94 ARG ARG A . n A 1 89 ILE 89 95 95 ILE ILE A . n A 1 90 GLU 90 96 96 GLU GLU A . n A 1 91 SER 91 97 97 SER SER A . n A 1 92 MET 92 98 98 MET MET A . n A 1 93 TYR 93 99 99 TYR TYR A . n A 1 94 GLY 94 100 100 GLY GLY A . n A 1 95 TYR 95 101 101 TYR TYR A . n A 1 96 GLY 96 102 102 GLY GLY A . n A 1 97 ASP 97 103 103 ASP ASP A . n A 1 98 GLU 98 104 104 GLU GLU A . n A 1 99 GLY 99 105 105 GLY GLY A . n A 1 100 CYS 100 106 106 CYS CYS A . n A 1 101 GLY 101 107 107 GLY GLY A . n A 1 102 GLU 102 108 108 GLU GLU A . n A 1 103 SER 103 109 109 SER SER A . n A 1 104 ILE 104 110 110 ILE ILE A . n A 1 105 PRO 105 111 111 PRO PRO A . n A 1 106 GLY 106 112 112 GLY GLY A . n A 1 107 ASN 107 113 113 ASN ASN A . n A 1 108 SER 108 114 114 SER SER A . n A 1 109 VAL 109 115 115 VAL VAL A . n A 1 110 LEU 110 116 116 LEU LEU A . n A 1 111 LEU 111 117 117 LEU LEU A . n A 1 112 PHE 112 118 118 PHE PHE A . n A 1 113 GLU 113 119 119 GLU GLU A . n A 1 114 ILE 114 120 120 ILE ILE A . n A 1 115 GLU 115 121 121 GLU GLU A . n A 1 116 LEU 116 122 122 LEU LEU A . n A 1 117 LEU 117 123 123 LEU LEU A . n A 1 118 SER 118 124 124 SER SER A . n A 1 119 PHE 119 125 125 PHE PHE A . n A 1 120 ARG 120 126 126 ARG ARG A . n A 1 121 GLU 121 127 127 GLU GLU A . n A 1 122 LEU 122 128 128 LEU LEU A . n A 1 123 GLU 123 129 ? ? ? A . n A 1 124 THR 124 130 ? ? ? A . n A 1 125 SER 125 131 ? ? ? A . n A 1 126 HIS 126 132 ? ? ? A . n A 1 127 HIS 127 133 ? ? ? A . n A 1 128 HIS 128 134 ? ? ? A . n A 1 129 HIS 129 135 ? ? ? A . n A 1 130 HIS 130 136 ? ? ? A . n A 1 131 HIS 131 137 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 IMD 1 201 1 IMD IMD A . C 3 RAP 1 202 1 RAP RAP A . D 4 HOH 1 301 1 HOH HOH A . D 4 HOH 2 302 2 HOH HOH A . D 4 HOH 3 303 3 HOH HOH A . D 4 HOH 4 304 4 HOH HOH A . D 4 HOH 5 305 5 HOH HOH A . D 4 HOH 6 306 6 HOH HOH A . D 4 HOH 7 307 7 HOH HOH A . D 4 HOH 8 308 8 HOH HOH A . D 4 HOH 9 309 9 HOH HOH A . D 4 HOH 10 310 10 HOH HOH A . D 4 HOH 11 311 11 HOH HOH A . D 4 HOH 12 312 12 HOH HOH A . D 4 HOH 13 313 13 HOH HOH A . D 4 HOH 14 314 14 HOH HOH A . D 4 HOH 15 315 15 HOH HOH A . D 4 HOH 16 316 16 HOH HOH A . D 4 HOH 17 317 17 HOH HOH A . D 4 HOH 18 318 18 HOH HOH A . D 4 HOH 19 319 19 HOH HOH A . D 4 HOH 20 320 20 HOH HOH A . D 4 HOH 21 321 21 HOH HOH A . D 4 HOH 22 322 22 HOH HOH A . D 4 HOH 23 323 23 HOH HOH A . D 4 HOH 24 324 24 HOH HOH A . D 4 HOH 25 325 25 HOH HOH A . D 4 HOH 26 326 26 HOH HOH A . D 4 HOH 27 327 27 HOH HOH A . D 4 HOH 28 328 30 HOH HOH A . D 4 HOH 29 329 31 HOH HOH A . D 4 HOH 30 330 32 HOH HOH A . D 4 HOH 31 331 33 HOH HOH A . D 4 HOH 32 332 34 HOH HOH A . D 4 HOH 33 333 35 HOH HOH A . D 4 HOH 34 334 36 HOH HOH A . D 4 HOH 35 335 37 HOH HOH A . D 4 HOH 36 336 38 HOH HOH A . D 4 HOH 37 337 39 HOH HOH A . D 4 HOH 38 338 40 HOH HOH A . D 4 HOH 39 339 41 HOH HOH A . D 4 HOH 40 340 42 HOH HOH A . D 4 HOH 41 341 43 HOH HOH A . D 4 HOH 42 342 44 HOH HOH A . D 4 HOH 43 343 45 HOH HOH A . D 4 HOH 44 344 46 HOH HOH A . D 4 HOH 45 345 47 HOH HOH A . D 4 HOH 46 346 48 HOH HOH A . D 4 HOH 47 347 49 HOH HOH A . D 4 HOH 48 348 50 HOH HOH A . D 4 HOH 49 349 51 HOH HOH A . D 4 HOH 50 350 52 HOH HOH A . D 4 HOH 51 351 53 HOH HOH A . D 4 HOH 52 352 54 HOH HOH A . D 4 HOH 53 353 55 HOH HOH A . D 4 HOH 54 354 56 HOH HOH A . D 4 HOH 55 355 57 HOH HOH A . D 4 HOH 56 356 58 HOH HOH A . D 4 HOH 57 357 59 HOH HOH A . D 4 HOH 58 358 60 HOH HOH A . D 4 HOH 59 359 61 HOH HOH A . D 4 HOH 60 360 62 HOH HOH A . D 4 HOH 61 361 63 HOH HOH A . D 4 HOH 62 362 64 HOH HOH A . D 4 HOH 63 363 65 HOH HOH A . D 4 HOH 64 364 66 HOH HOH A . D 4 HOH 65 365 67 HOH HOH A . D 4 HOH 66 366 68 HOH HOH A . D 4 HOH 67 367 69 HOH HOH A . D 4 HOH 68 368 71 HOH HOH A . D 4 HOH 69 369 74 HOH HOH A . D 4 HOH 70 370 76 HOH HOH A . D 4 HOH 71 371 77 HOH HOH A . D 4 HOH 72 372 78 HOH HOH A . D 4 HOH 73 373 79 HOH HOH A . D 4 HOH 74 374 80 HOH HOH A . D 4 HOH 75 375 81 HOH HOH A . D 4 HOH 76 376 82 HOH HOH A . D 4 HOH 77 377 83 HOH HOH A . D 4 HOH 78 378 84 HOH HOH A . D 4 HOH 79 379 85 HOH HOH A . D 4 HOH 80 380 86 HOH HOH A . D 4 HOH 81 381 87 HOH HOH A . D 4 HOH 82 382 88 HOH HOH A . D 4 HOH 83 383 89 HOH HOH A . D 4 HOH 84 384 90 HOH HOH A . D 4 HOH 85 385 91 HOH HOH A . D 4 HOH 86 386 92 HOH HOH A . D 4 HOH 87 387 93 HOH HOH A . D 4 HOH 88 388 94 HOH HOH A . D 4 HOH 89 389 95 HOH HOH A . D 4 HOH 90 390 96 HOH HOH A . D 4 HOH 91 391 97 HOH HOH A . D 4 HOH 92 392 98 HOH HOH A . D 4 HOH 93 393 99 HOH HOH A . D 4 HOH 94 394 10 HOH HOH A . D 4 HOH 95 395 10 HOH HOH A . D 4 HOH 96 396 10 HOH HOH A . D 4 HOH 97 397 10 HOH HOH A . D 4 HOH 98 398 10 HOH HOH A . D 4 HOH 99 399 10 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2015-06-10 2 'Structure model' 1 1 2015-07-01 3 'Structure model' 1 2 2023-11-08 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' 5 3 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' chem_comp_atom 2 3 'Structure model' chem_comp_bond 3 3 'Structure model' database_2 4 3 'Structure model' pdbx_initial_refinement_model 5 3 'Structure model' struct_ref_seq_dif 6 3 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_struct_ref_seq_dif.details' 4 3 'Structure model' '_struct_site.pdbx_auth_asym_id' 5 3 'Structure model' '_struct_site.pdbx_auth_comp_id' 6 3 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 REFMAC 5.7.0032 ? program 'Garib N. Murshudov' garib@ysbl.york.ac.uk refinement http://www.ccp4.ac.uk/dist/html/refmac5.html Fortran_77 ? 2 PDB_EXTRACT 3.14 'Dec. 10, 2013' package PDB deposit@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 3 DNA . ? ? ? ? 'data collection' ? ? ? 4 MOSFLM . ? ? ? ? 'data reduction' ? ? ? 5 SCALA . ? ? ? ? 'data scaling' ? ? ? 6 MOLREP . ? ? ? ? phasing ? ? ? # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 OD2 _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 ASP _pdbx_validate_close_contact.auth_seq_id_1 27 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 A _pdbx_validate_close_contact.auth_atom_id_2 O _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 HOH _pdbx_validate_close_contact.auth_seq_id_2 342 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 1.98 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 GLU A 8 ? ? -46.90 108.73 2 1 ASN A 88 ? ? 78.42 -0.13 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLU 129 ? A GLU 123 2 1 Y 1 A THR 130 ? A THR 124 3 1 Y 1 A SER 131 ? A SER 125 4 1 Y 1 A HIS 132 ? A HIS 126 5 1 Y 1 A HIS 133 ? A HIS 127 6 1 Y 1 A HIS 134 ? A HIS 128 7 1 Y 1 A HIS 135 ? A HIS 129 8 1 Y 1 A HIS 136 ? A HIS 130 9 1 Y 1 A HIS 137 ? A HIS 131 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HIS N N N N 137 HIS CA C N S 138 HIS C C N N 139 HIS O O N N 140 HIS CB C N N 141 HIS CG C Y N 142 HIS ND1 N Y N 143 HIS CD2 C Y N 144 HIS CE1 C Y N 145 HIS NE2 N Y N 146 HIS OXT O N N 147 HIS H H N N 148 HIS H2 H N N 149 HIS HA H N N 150 HIS HB2 H N N 151 HIS HB3 H N N 152 HIS HD1 H N N 153 HIS HD2 H N N 154 HIS HE1 H N N 155 HIS HE2 H N N 156 HIS HXT H N N 157 HOH O O N N 158 HOH H1 H N N 159 HOH H2 H N N 160 ILE N N N N 161 ILE CA C N S 162 ILE C C N N 163 ILE O O N N 164 ILE CB C N S 165 ILE CG1 C N N 166 ILE CG2 C N N 167 ILE CD1 C N N 168 ILE OXT O N N 169 ILE H H N N 170 ILE H2 H N N 171 ILE HA H N N 172 ILE HB H N N 173 ILE HG12 H N N 174 ILE HG13 H N N 175 ILE HG21 H N N 176 ILE HG22 H N N 177 ILE HG23 H N N 178 ILE HD11 H N N 179 ILE HD12 H N N 180 ILE HD13 H N N 181 ILE HXT H N N 182 IMD N1 N Y N 183 IMD C2 C Y N 184 IMD N3 N Y N 185 IMD C4 C Y N 186 IMD C5 C Y N 187 IMD HN1 H N N 188 IMD H2 H N N 189 IMD HN3 H N N 190 IMD H4 H N N 191 IMD H5 H N N 192 LEU N N N N 193 LEU CA C N S 194 LEU C C N N 195 LEU O O N N 196 LEU CB C N N 197 LEU CG C N N 198 LEU CD1 C N N 199 LEU CD2 C N N 200 LEU OXT O N N 201 LEU H H N N 202 LEU H2 H N N 203 LEU HA H N N 204 LEU HB2 H N N 205 LEU HB3 H N N 206 LEU HG H N N 207 LEU HD11 H N N 208 LEU HD12 H N N 209 LEU HD13 H N N 210 LEU HD21 H N N 211 LEU HD22 H N N 212 LEU HD23 H N N 213 LEU HXT H N N 214 LYS N N N N 215 LYS CA C N S 216 LYS C C N N 217 LYS O O N N 218 LYS CB C N N 219 LYS CG C N N 220 LYS CD C N N 221 LYS CE C N N 222 LYS NZ N N N 223 LYS OXT O N N 224 LYS H H N N 225 LYS H2 H N N 226 LYS HA H N N 227 LYS HB2 H N N 228 LYS HB3 H N N 229 LYS HG2 H N N 230 LYS HG3 H N N 231 LYS HD2 H N N 232 LYS HD3 H N N 233 LYS HE2 H N N 234 LYS HE3 H N N 235 LYS HZ1 H N N 236 LYS HZ2 H N N 237 LYS HZ3 H N N 238 LYS HXT H N N 239 MET N N N N 240 MET CA C N S 241 MET C C N N 242 MET O O N N 243 MET CB C N N 244 MET CG C N N 245 MET SD S N N 246 MET CE C N N 247 MET OXT O N N 248 MET H H N N 249 MET H2 H N N 250 MET HA H N N 251 MET HB2 H N N 252 MET HB3 H N N 253 MET HG2 H N N 254 MET HG3 H N N 255 MET HE1 H N N 256 MET HE2 H N N 257 MET HE3 H N N 258 MET HXT H N N 259 PHE N N N N 260 PHE CA C N S 261 PHE C C N N 262 PHE O O N N 263 PHE CB C N N 264 PHE CG C Y N 265 PHE CD1 C Y N 266 PHE CD2 C Y N 267 PHE CE1 C Y N 268 PHE CE2 C Y N 269 PHE CZ C Y N 270 PHE OXT O N N 271 PHE H H N N 272 PHE H2 H N N 273 PHE HA H N N 274 PHE HB2 H N N 275 PHE HB3 H N N 276 PHE HD1 H N N 277 PHE HD2 H N N 278 PHE HE1 H N N 279 PHE HE2 H N N 280 PHE HZ H N N 281 PHE HXT H N N 282 PRO N N N N 283 PRO CA C N S 284 PRO C C N N 285 PRO O O N N 286 PRO CB C N N 287 PRO CG C N N 288 PRO CD C N N 289 PRO OXT O N N 290 PRO H H N N 291 PRO HA H N N 292 PRO HB2 H N N 293 PRO HB3 H N N 294 PRO HG2 H N N 295 PRO HG3 H N N 296 PRO HD2 H N N 297 PRO HD3 H N N 298 PRO HXT H N N 299 RAP C1 C N N 300 RAP O1 O N N 301 RAP O2 O N N 302 RAP C2 C N S 303 RAP C3 C N N 304 RAP C4 C N N 305 RAP C5 C N N 306 RAP C6 C N N 307 RAP N7 N N N 308 RAP C8 C N N 309 RAP O3 O N N 310 RAP C9 C N N 311 RAP O4 O N N 312 RAP C10 C N R 313 RAP O5 O N N 314 RAP O6 O N N 315 RAP C11 C N R 316 RAP C12 C N N 317 RAP C13 C N N 318 RAP C14 C N S 319 RAP C15 C N N 320 RAP C16 C N S 321 RAP O7 O N N 322 RAP C17 C N N 323 RAP C18 C N N 324 RAP C19 C N N 325 RAP C20 C N N 326 RAP C21 C N N 327 RAP C22 C N N 328 RAP C23 C N S 329 RAP C24 C N N 330 RAP C25 C N R 331 RAP C26 C N N 332 RAP O8 O N N 333 RAP C27 C N R 334 RAP O9 O N N 335 RAP C28 C N R 336 RAP O10 O N N 337 RAP C29 C N N 338 RAP C30 C N N 339 RAP C31 C N R 340 RAP C32 C N N 341 RAP O11 O N N 342 RAP C33 C N N 343 RAP C34 C N S 344 RAP C35 C N R 345 RAP C36 C N N 346 RAP C37 C N S 347 RAP C38 C N N 348 RAP C39 C N R 349 RAP O12 O N N 350 RAP C40 C N R 351 RAP O13 O N N 352 RAP C41 C N N 353 RAP C42 C N N 354 RAP C43 C N N 355 RAP C44 C N N 356 RAP C45 C N N 357 RAP C46 C N N 358 RAP C47 C N N 359 RAP C48 C N N 360 RAP C49 C N N 361 RAP C50 C N N 362 RAP C51 C N N 363 RAP C52 C N N 364 RAP H2 H N N 365 RAP H31A H N N 366 RAP H32 H N N 367 RAP H41 H N N 368 RAP H42 H N N 369 RAP H51 H N N 370 RAP H52 H N N 371 RAP H61 H N N 372 RAP H62 H N N 373 RAP HO6 H N N 374 RAP H11 H N N 375 RAP H121 H N N 376 RAP H122 H N N 377 RAP H131 H N N 378 RAP H132 H N N 379 RAP H14 H N N 380 RAP H151 H N N 381 RAP H152 H N N 382 RAP H16 H N N 383 RAP H18 H N N 384 RAP H19 H N N 385 RAP H20 H N N 386 RAP H21 H N N 387 RAP H22 H N N 388 RAP H23 H N N 389 RAP H241 H N N 390 RAP H242 H N N 391 RAP H25 H N N 392 RAP H27 H N N 393 RAP H28 H N N 394 RAP HO1 H N N 395 RAP H30 H N N 396 RAP H31 H N N 397 RAP H331 H N N 398 RAP H332 H N N 399 RAP H34 H N N 400 RAP H35 H N N 401 RAP H361 H N N 402 RAP H362 H N N 403 RAP H37 H N N 404 RAP H381 H N N 405 RAP H382 H N N 406 RAP H39 H N N 407 RAP H40 H N N 408 RAP HO3 H N N 409 RAP H411 H N N 410 RAP H412 H N N 411 RAP H421 H N N 412 RAP H422 H N N 413 RAP H431 H N N 414 RAP H432 H N N 415 RAP H433 H N N 416 RAP H441 H N N 417 RAP H442 H N N 418 RAP H443 H N N 419 RAP H451 H N N 420 RAP H452 H N N 421 RAP H453 H N N 422 RAP H461 H N N 423 RAP H462 H N N 424 RAP H463 H N N 425 RAP H471 H N N 426 RAP H472 H N N 427 RAP H473 H N N 428 RAP H481 H N N 429 RAP H482 H N N 430 RAP H483 H N N 431 RAP H491 H N N 432 RAP H492 H N N 433 RAP H493 H N N 434 RAP H501 H N N 435 RAP H502 H N N 436 RAP H503 H N N 437 RAP H511 H N N 438 RAP H512 H N N 439 RAP H513 H N N 440 RAP H521 H N N 441 RAP H522 H N N 442 RAP H523 H N N 443 SER N N N N 444 SER CA C N S 445 SER C C N N 446 SER O O N N 447 SER CB C N N 448 SER OG O N N 449 SER OXT O N N 450 SER H H N N 451 SER H2 H N N 452 SER HA H N N 453 SER HB2 H N N 454 SER HB3 H N N 455 SER HG H N N 456 SER HXT H N N 457 THR N N N N 458 THR CA C N S 459 THR C C N N 460 THR O O N N 461 THR CB C N R 462 THR OG1 O N N 463 THR CG2 C N N 464 THR OXT O N N 465 THR H H N N 466 THR H2 H N N 467 THR HA H N N 468 THR HB H N N 469 THR HG1 H N N 470 THR HG21 H N N 471 THR HG22 H N N 472 THR HG23 H N N 473 THR HXT H N N 474 TRP N N N N 475 TRP CA C N S 476 TRP C C N N 477 TRP O O N N 478 TRP CB C N N 479 TRP CG C Y N 480 TRP CD1 C Y N 481 TRP CD2 C Y N 482 TRP NE1 N Y N 483 TRP CE2 C Y N 484 TRP CE3 C Y N 485 TRP CZ2 C Y N 486 TRP CZ3 C Y N 487 TRP CH2 C Y N 488 TRP OXT O N N 489 TRP H H N N 490 TRP H2 H N N 491 TRP HA H N N 492 TRP HB2 H N N 493 TRP HB3 H N N 494 TRP HD1 H N N 495 TRP HE1 H N N 496 TRP HE3 H N N 497 TRP HZ2 H N N 498 TRP HZ3 H N N 499 TRP HH2 H N N 500 TRP HXT H N N 501 TYR N N N N 502 TYR CA C N S 503 TYR C C N N 504 TYR O O N N 505 TYR CB C N N 506 TYR CG C Y N 507 TYR CD1 C Y N 508 TYR CD2 C Y N 509 TYR CE1 C Y N 510 TYR CE2 C Y N 511 TYR CZ C Y N 512 TYR OH O N N 513 TYR OXT O N N 514 TYR H H N N 515 TYR H2 H N N 516 TYR HA H N N 517 TYR HB2 H N N 518 TYR HB3 H N N 519 TYR HD1 H N N 520 TYR HD2 H N N 521 TYR HE1 H N N 522 TYR HE2 H N N 523 TYR HH H N N 524 TYR HXT H N N 525 VAL N N N N 526 VAL CA C N S 527 VAL C C N N 528 VAL O O N N 529 VAL CB C N N 530 VAL CG1 C N N 531 VAL CG2 C N N 532 VAL OXT O N N 533 VAL H H N N 534 VAL H2 H N N 535 VAL HA H N N 536 VAL HB H N N 537 VAL HG11 H N N 538 VAL HG12 H N N 539 VAL HG13 H N N 540 VAL HG21 H N N 541 VAL HG22 H N N 542 VAL HG23 H N N 543 VAL HXT H N N 544 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 HOH O H1 sing N N 150 HOH O H2 sing N N 151 ILE N CA sing N N 152 ILE N H sing N N 153 ILE N H2 sing N N 154 ILE CA C sing N N 155 ILE CA CB sing N N 156 ILE CA HA sing N N 157 ILE C O doub N N 158 ILE C OXT sing N N 159 ILE CB CG1 sing N N 160 ILE CB CG2 sing N N 161 ILE CB HB sing N N 162 ILE CG1 CD1 sing N N 163 ILE CG1 HG12 sing N N 164 ILE CG1 HG13 sing N N 165 ILE CG2 HG21 sing N N 166 ILE CG2 HG22 sing N N 167 ILE CG2 HG23 sing N N 168 ILE CD1 HD11 sing N N 169 ILE CD1 HD12 sing N N 170 ILE CD1 HD13 sing N N 171 ILE OXT HXT sing N N 172 IMD N1 C2 sing Y N 173 IMD N1 C5 sing Y N 174 IMD N1 HN1 sing N N 175 IMD C2 N3 doub Y N 176 IMD C2 H2 sing N N 177 IMD N3 C4 sing Y N 178 IMD N3 HN3 sing N N 179 IMD C4 C5 doub Y N 180 IMD C4 H4 sing N N 181 IMD C5 H5 sing N N 182 LEU N CA sing N N 183 LEU N H sing N N 184 LEU N H2 sing N N 185 LEU CA C sing N N 186 LEU CA CB sing N N 187 LEU CA HA sing N N 188 LEU C O doub N N 189 LEU C OXT sing N N 190 LEU CB CG sing N N 191 LEU CB HB2 sing N N 192 LEU CB HB3 sing N N 193 LEU CG CD1 sing N N 194 LEU CG CD2 sing N N 195 LEU CG HG sing N N 196 LEU CD1 HD11 sing N N 197 LEU CD1 HD12 sing N N 198 LEU CD1 HD13 sing N N 199 LEU CD2 HD21 sing N N 200 LEU CD2 HD22 sing N N 201 LEU CD2 HD23 sing N N 202 LEU OXT HXT sing N N 203 LYS N CA sing N N 204 LYS N H sing N N 205 LYS N H2 sing N N 206 LYS CA C sing N N 207 LYS CA CB sing N N 208 LYS CA HA sing N N 209 LYS C O doub N N 210 LYS C OXT sing N N 211 LYS CB CG sing N N 212 LYS CB HB2 sing N N 213 LYS CB HB3 sing N N 214 LYS CG CD sing N N 215 LYS CG HG2 sing N N 216 LYS CG HG3 sing N N 217 LYS CD CE sing N N 218 LYS CD HD2 sing N N 219 LYS CD HD3 sing N N 220 LYS CE NZ sing N N 221 LYS CE HE2 sing N N 222 LYS CE HE3 sing N N 223 LYS NZ HZ1 sing N N 224 LYS NZ HZ2 sing N N 225 LYS NZ HZ3 sing N N 226 LYS OXT HXT sing N N 227 MET N CA sing N N 228 MET N H sing N N 229 MET N H2 sing N N 230 MET CA C sing N N 231 MET CA CB sing N N 232 MET CA HA sing N N 233 MET C O doub N N 234 MET C OXT sing N N 235 MET CB CG sing N N 236 MET CB HB2 sing N N 237 MET CB HB3 sing N N 238 MET CG SD sing N N 239 MET CG HG2 sing N N 240 MET CG HG3 sing N N 241 MET SD CE sing N N 242 MET CE HE1 sing N N 243 MET CE HE2 sing N N 244 MET CE HE3 sing N N 245 MET OXT HXT sing N N 246 PHE N CA sing N N 247 PHE N H sing N N 248 PHE N H2 sing N N 249 PHE CA C sing N N 250 PHE CA CB sing N N 251 PHE CA HA sing N N 252 PHE C O doub N N 253 PHE C OXT sing N N 254 PHE CB CG sing N N 255 PHE CB HB2 sing N N 256 PHE CB HB3 sing N N 257 PHE CG CD1 doub Y N 258 PHE CG CD2 sing Y N 259 PHE CD1 CE1 sing Y N 260 PHE CD1 HD1 sing N N 261 PHE CD2 CE2 doub Y N 262 PHE CD2 HD2 sing N N 263 PHE CE1 CZ doub Y N 264 PHE CE1 HE1 sing N N 265 PHE CE2 CZ sing Y N 266 PHE CE2 HE2 sing N N 267 PHE CZ HZ sing N N 268 PHE OXT HXT sing N N 269 PRO N CA sing N N 270 PRO N CD sing N N 271 PRO N H sing N N 272 PRO CA C sing N N 273 PRO CA CB sing N N 274 PRO CA HA sing N N 275 PRO C O doub N N 276 PRO C OXT sing N N 277 PRO CB CG sing N N 278 PRO CB HB2 sing N N 279 PRO CB HB3 sing N N 280 PRO CG CD sing N N 281 PRO CG HG2 sing N N 282 PRO CG HG3 sing N N 283 PRO CD HD2 sing N N 284 PRO CD HD3 sing N N 285 PRO OXT HXT sing N N 286 RAP C1 O1 sing N N 287 RAP C1 O2 doub N N 288 RAP C1 C2 sing N N 289 RAP O1 C34 sing N N 290 RAP C2 C3 sing N N 291 RAP C2 N7 sing N N 292 RAP C2 H2 sing N N 293 RAP C3 C4 sing N N 294 RAP C3 H31A sing N N 295 RAP C3 H32 sing N N 296 RAP C4 C5 sing N N 297 RAP C4 H41 sing N N 298 RAP C4 H42 sing N N 299 RAP C5 C6 sing N N 300 RAP C5 H51 sing N N 301 RAP C5 H52 sing N N 302 RAP C6 N7 sing N N 303 RAP C6 H61 sing N N 304 RAP C6 H62 sing N N 305 RAP N7 C8 sing N N 306 RAP C8 O3 doub N N 307 RAP C8 C9 sing N N 308 RAP C9 O4 doub N N 309 RAP C9 C10 sing N N 310 RAP C10 O5 sing N N 311 RAP C10 O6 sing N N 312 RAP C10 C11 sing N N 313 RAP O5 C14 sing N N 314 RAP O6 HO6 sing N N 315 RAP C11 C12 sing N N 316 RAP C11 C43 sing N N 317 RAP C11 H11 sing N N 318 RAP C12 C13 sing N N 319 RAP C12 H121 sing N N 320 RAP C12 H122 sing N N 321 RAP C13 C14 sing N N 322 RAP C13 H131 sing N N 323 RAP C13 H132 sing N N 324 RAP C14 C15 sing N N 325 RAP C14 H14 sing N N 326 RAP C15 C16 sing N N 327 RAP C15 H151 sing N N 328 RAP C15 H152 sing N N 329 RAP C16 O7 sing N N 330 RAP C16 C17 sing N N 331 RAP C16 H16 sing N N 332 RAP O7 C50 sing N N 333 RAP C17 C18 doub N E 334 RAP C17 C44 sing N N 335 RAP C18 C19 sing N N 336 RAP C18 H18 sing N N 337 RAP C19 C20 doub N E 338 RAP C19 H19 sing N N 339 RAP C20 C21 sing N N 340 RAP C20 H20 sing N N 341 RAP C21 C22 doub N E 342 RAP C21 H21 sing N N 343 RAP C22 C23 sing N N 344 RAP C22 H22 sing N N 345 RAP C23 C24 sing N N 346 RAP C23 C45 sing N N 347 RAP C23 H23 sing N N 348 RAP C24 C25 sing N N 349 RAP C24 H241 sing N N 350 RAP C24 H242 sing N N 351 RAP C25 C26 sing N N 352 RAP C25 C46 sing N N 353 RAP C25 H25 sing N N 354 RAP C26 O8 doub N N 355 RAP C26 C27 sing N N 356 RAP C27 O9 sing N N 357 RAP C27 C28 sing N N 358 RAP C27 H27 sing N N 359 RAP O9 C51 sing N N 360 RAP C28 O10 sing N N 361 RAP C28 C29 sing N N 362 RAP C28 H28 sing N N 363 RAP O10 HO1 sing N N 364 RAP C29 C30 doub N E 365 RAP C29 C47 sing N N 366 RAP C30 C31 sing N N 367 RAP C30 H30 sing N N 368 RAP C31 C32 sing N N 369 RAP C31 C48 sing N N 370 RAP C31 H31 sing N N 371 RAP C32 O11 doub N N 372 RAP C32 C33 sing N N 373 RAP C33 C34 sing N N 374 RAP C33 H331 sing N N 375 RAP C33 H332 sing N N 376 RAP C34 C35 sing N N 377 RAP C34 H34 sing N N 378 RAP C35 C36 sing N N 379 RAP C35 C49 sing N N 380 RAP C35 H35 sing N N 381 RAP C36 C37 sing N N 382 RAP C36 H361 sing N N 383 RAP C36 H362 sing N N 384 RAP C37 C38 sing N N 385 RAP C37 C42 sing N N 386 RAP C37 H37 sing N N 387 RAP C38 C39 sing N N 388 RAP C38 H381 sing N N 389 RAP C38 H382 sing N N 390 RAP C39 O12 sing N N 391 RAP C39 C40 sing N N 392 RAP C39 H39 sing N N 393 RAP O12 C52 sing N N 394 RAP C40 O13 sing N N 395 RAP C40 C41 sing N N 396 RAP C40 H40 sing N N 397 RAP O13 HO3 sing N N 398 RAP C41 C42 sing N N 399 RAP C41 H411 sing N N 400 RAP C41 H412 sing N N 401 RAP C42 H421 sing N N 402 RAP C42 H422 sing N N 403 RAP C43 H431 sing N N 404 RAP C43 H432 sing N N 405 RAP C43 H433 sing N N 406 RAP C44 H441 sing N N 407 RAP C44 H442 sing N N 408 RAP C44 H443 sing N N 409 RAP C45 H451 sing N N 410 RAP C45 H452 sing N N 411 RAP C45 H453 sing N N 412 RAP C46 H461 sing N N 413 RAP C46 H462 sing N N 414 RAP C46 H463 sing N N 415 RAP C47 H471 sing N N 416 RAP C47 H472 sing N N 417 RAP C47 H473 sing N N 418 RAP C48 H481 sing N N 419 RAP C48 H482 sing N N 420 RAP C48 H483 sing N N 421 RAP C49 H491 sing N N 422 RAP C49 H492 sing N N 423 RAP C49 H493 sing N N 424 RAP C50 H501 sing N N 425 RAP C50 H502 sing N N 426 RAP C50 H503 sing N N 427 RAP C51 H511 sing N N 428 RAP C51 H512 sing N N 429 RAP C51 H513 sing N N 430 RAP C52 H521 sing N N 431 RAP C52 H522 sing N N 432 RAP C52 H523 sing N N 433 SER N CA sing N N 434 SER N H sing N N 435 SER N H2 sing N N 436 SER CA C sing N N 437 SER CA CB sing N N 438 SER CA HA sing N N 439 SER C O doub N N 440 SER C OXT sing N N 441 SER CB OG sing N N 442 SER CB HB2 sing N N 443 SER CB HB3 sing N N 444 SER OG HG sing N N 445 SER OXT HXT sing N N 446 THR N CA sing N N 447 THR N H sing N N 448 THR N H2 sing N N 449 THR CA C sing N N 450 THR CA CB sing N N 451 THR CA HA sing N N 452 THR C O doub N N 453 THR C OXT sing N N 454 THR CB OG1 sing N N 455 THR CB CG2 sing N N 456 THR CB HB sing N N 457 THR OG1 HG1 sing N N 458 THR CG2 HG21 sing N N 459 THR CG2 HG22 sing N N 460 THR CG2 HG23 sing N N 461 THR OXT HXT sing N N 462 TRP N CA sing N N 463 TRP N H sing N N 464 TRP N H2 sing N N 465 TRP CA C sing N N 466 TRP CA CB sing N N 467 TRP CA HA sing N N 468 TRP C O doub N N 469 TRP C OXT sing N N 470 TRP CB CG sing N N 471 TRP CB HB2 sing N N 472 TRP CB HB3 sing N N 473 TRP CG CD1 doub Y N 474 TRP CG CD2 sing Y N 475 TRP CD1 NE1 sing Y N 476 TRP CD1 HD1 sing N N 477 TRP CD2 CE2 doub Y N 478 TRP CD2 CE3 sing Y N 479 TRP NE1 CE2 sing Y N 480 TRP NE1 HE1 sing N N 481 TRP CE2 CZ2 sing Y N 482 TRP CE3 CZ3 doub Y N 483 TRP CE3 HE3 sing N N 484 TRP CZ2 CH2 doub Y N 485 TRP CZ2 HZ2 sing N N 486 TRP CZ3 CH2 sing Y N 487 TRP CZ3 HZ3 sing N N 488 TRP CH2 HH2 sing N N 489 TRP OXT HXT sing N N 490 TYR N CA sing N N 491 TYR N H sing N N 492 TYR N H2 sing N N 493 TYR CA C sing N N 494 TYR CA CB sing N N 495 TYR CA HA sing N N 496 TYR C O doub N N 497 TYR C OXT sing N N 498 TYR CB CG sing N N 499 TYR CB HB2 sing N N 500 TYR CB HB3 sing N N 501 TYR CG CD1 doub Y N 502 TYR CG CD2 sing Y N 503 TYR CD1 CE1 sing Y N 504 TYR CD1 HD1 sing N N 505 TYR CD2 CE2 doub Y N 506 TYR CD2 HD2 sing N N 507 TYR CE1 CZ doub Y N 508 TYR CE1 HE1 sing N N 509 TYR CE2 CZ sing Y N 510 TYR CE2 HE2 sing N N 511 TYR CZ OH sing N N 512 TYR OH HH sing N N 513 TYR OXT HXT sing N N 514 VAL N CA sing N N 515 VAL N H sing N N 516 VAL N H2 sing N N 517 VAL CA C sing N N 518 VAL CA CB sing N N 519 VAL CA HA sing N N 520 VAL C O doub N N 521 VAL C OXT sing N N 522 VAL CB CG1 sing N N 523 VAL CB CG2 sing N N 524 VAL CB HB sing N N 525 VAL CG1 HG11 sing N N 526 VAL CG1 HG12 sing N N 527 VAL CG1 HG13 sing N N 528 VAL CG2 HG21 sing N N 529 VAL CG2 HG22 sing N N 530 VAL CG2 HG23 sing N N 531 VAL OXT HXT sing N N 532 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 IMIDAZOLE IMD 3 'RAPAMYCIN IMMUNOSUPPRESSANT DRUG' RAP 4 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 2VN1 _pdbx_initial_refinement_model.details ? #