HEADER IMMUNE SYSTEM 22-JUL-14 4QXU TITLE NOVEL INHIBITION MECHANISM OF MEMBRANE METALLOPROTEASE BY AN EXOSITE- TITLE 2 SWIVELING CONFORMATIONAL ANTIBODY COMPND MOL_ID: 1; COMPND 2 MOLECULE: ANTI_MT1-MMP LIGHT CHAIN; COMPND 3 CHAIN: L; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: ANTI_MT1-MMP HEAVY CHAIN; COMPND 7 CHAIN: H; COMPND 8 ENGINEERED: YES; COMPND 9 MOL_ID: 3; COMPND 10 MOLECULE: MATRIX METALLOPROTEINASE-14; COMPND 11 CHAIN: K; COMPND 12 FRAGMENT: PEPTIDE (UNP RESIDUES 218-228); COMPND 13 SYNONYM: MMP-14, MMP-X1, MEMBRANE-TYPE MATRIX METALLOPROTEINASE 1, COMPND 14 MT-MMP 1, MTMMP1, MEMBRANE-TYPE-1 MATRIX METALLOPROTEINASE, MT1-MMP, COMPND 15 MT1MMP; COMPND 16 EC: 3.4.24.80; COMPND 17 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 MOL_ID: 2; SOURCE 8 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 9 ORGANISM_COMMON: MOUSE; SOURCE 10 ORGANISM_TAXID: 10090; SOURCE 11 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 12 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 13 MOL_ID: 3; SOURCE 14 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 15 ORGANISM_COMMON: HUMAN; SOURCE 16 ORGANISM_TAXID: 9606; SOURCE 17 GENE: MMP14; SOURCE 18 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 19 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS STRUCTURAL GENOMICS, PSI-2, PROTEIN STRUCTURE INITIATIVE, ISRAEL KEYWDS 2 STRUCTURAL PROTEOMICS CENTER, ISPC, IGG FOLD, IMMUNE SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR Y.UDI,M.GROSSMAN,I.SOLOMONOV,O.DYM,H.ROZENBERG,V.MORENO,P.CUINIASSE, AUTHOR 2 V.DIVE,A.G.ARROYO,I.SAGI,ISRAEL STRUCTURAL PROTEOMICS CENTER (ISPC) REVDAT 4 20-SEP-23 4QXU 1 REMARK SSBOND REVDAT 3 28-JAN-15 4QXU 1 JRNL REVDAT 2 31-DEC-14 4QXU 1 JRNL REVDAT 1 17-DEC-14 4QXU 0 JRNL AUTH Y.UDI,M.GROSSMAN,I.SOLOMONOV,O.DYM,H.ROZENBERG,V.MORENO, JRNL AUTH 2 P.CUNIASSE,V.DIVE,A.G.ARROYO,I.SAGI JRNL TITL INHIBITION MECHANISM OF MEMBRANE METALLOPROTEASE BY AN JRNL TITL 2 EXOSITE-SWIVELING CONFORMATIONAL ANTIBODY. JRNL REF STRUCTURE V. 23 104 2015 JRNL REFN ISSN 0969-2126 JRNL PMID 25482542 JRNL DOI 10.1016/J.STR.2014.10.012 REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.7.0029 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.26 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 89.4 REMARK 3 NUMBER OF REFLECTIONS : 22973 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.246 REMARK 3 R VALUE (WORKING SET) : 0.243 REMARK 3 FREE R VALUE : 0.293 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1229 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.30 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.36 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1472 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 78.04 REMARK 3 BIN R VALUE (WORKING SET) : 0.3760 REMARK 3 BIN FREE R VALUE SET COUNT : 77 REMARK 3 BIN FREE R VALUE : 0.4390 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3419 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 10 REMARK 3 SOLVENT ATOMS : 15 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 33.42 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.12000 REMARK 3 B22 (A**2) : 0.63000 REMARK 3 B33 (A**2) : -0.75000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.365 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.277 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.194 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 8.130 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.913 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.887 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3544 ; 0.014 ; 0.020 REMARK 3 BOND LENGTHS OTHERS (A): 3192 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4837 ; 1.783 ; 1.950 REMARK 3 BOND ANGLES OTHERS (DEGREES): 7373 ; 0.920 ; 3.002 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 457 ; 7.786 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 140 ;34.857 ;24.000 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 546 ;17.638 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 16 ;21.231 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 544 ; 0.110 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4043 ; 0.008 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 805 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 4QXU COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 04-AUG-14. REMARK 100 THE DEPOSITION ID IS D_1000086649. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 18-MAR-14 REMARK 200 TEMPERATURE (KELVIN) : 298 REMARK 200 PH : 6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID29 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97624 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 24287 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 90.0 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.42 REMARK 200 COMPLETENESS FOR SHELL (%) : 78.9 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 4OUU REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 58.10 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.94 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M (NH4)2SO4, 0.01M MGCL2 0.05M MES, REMARK 280 16% PEG 8000, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 298K, REMARK 280 PH 6 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 39.78000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 46.80000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 39.78000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 46.80000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 39.78000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 39.78000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5510 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19550 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -66.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: L, H, K REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA H 221 REMARK 465 ALA H 222 REMARK 465 ALA H 223 REMARK 465 LEU H 224 REMARK 465 GLU H 225 REMARK 465 HIS H 226 REMARK 465 HIS H 227 REMARK 465 HIS H 228 REMARK 465 HIS H 229 REMARK 465 HIS H 230 REMARK 465 HIS H 231 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG L 24 CD NE CZ NH1 NH2 REMARK 470 LYS L 50 CG CD CE NZ REMARK 470 ARG L 59 CZ NH1 NH2 REMARK 470 LYS L 108 NZ REMARK 470 LYS L 112 CE NZ REMARK 470 LYS L 147 CD CE NZ REMARK 470 LYS L 174 CG CD CE NZ REMARK 470 LYS H 3 CD CE NZ REMARK 470 MET H 93 CE REMARK 470 GLN H 136 CD OE1 NE2 REMARK 470 SER H 177 OG REMARK 470 ASP H 178 CG OD1 OD2 REMARK 470 LYS H 214 NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 CYS H 145 CA - CB - SG ANGL. DEV. = 9.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 VAL L 56 -50.62 76.21 REMARK 500 SER L 57 18.98 -148.62 REMARK 500 ALA L 135 85.87 -152.34 REMARK 500 LYS L 204 -37.58 -33.81 REMARK 500 LEU H 18 128.48 -173.23 REMARK 500 ALA H 92 161.66 177.20 REMARK 500 ASN H 138 94.60 107.97 REMARK 500 ASN H 160 52.43 37.15 REMARK 500 SER H 166 -73.08 -40.89 REMARK 500 ALA H 206 -37.46 -38.74 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 H 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 H 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR CHAIN K OF MATRIX REMARK 800 METALLOPROTEINASE-14 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4OUU RELATED DB: PDB REMARK 900 RELATED ID: 4P3D RELATED DB: PDB REMARK 900 RELATED ID: 4P3C RELATED DB: PDB DBREF 4QXU K 218 228 UNP P50281 MMP14_HUMAN 218 228 DBREF 4QXU L 1 219 PDB 4QXU 4QXU 1 219 DBREF 4QXU H 1 231 PDB 4QXU 4QXU 1 231 SEQRES 1 L 219 ASP VAL LEU MET THR GLN THR PRO LEU SER LEU PRO VAL SEQRES 2 L 219 GLY LEU GLY ASP GLN ALA SER ILE SER CYS ARG SER SER SEQRES 3 L 219 GLN SER ILE VAL HIS SER ASN GLY ASN THR TYR LEU GLU SEQRES 4 L 219 TRP TYR LEU GLN LYS PRO GLY GLN SER PRO LYS LEU LEU SEQRES 5 L 219 ILE TYR LYS VAL SER ASN ARG PHE SER GLY VAL PRO ASP SEQRES 6 L 219 ARG PHE SER GLY SER GLY SER GLY THR ASP PHE THR LEU SEQRES 7 L 219 LYS ILE SER ARG VAL GLU ALA GLU ASP LEU GLY VAL TYR SEQRES 8 L 219 TYR CYS PHE GLN GLY SER HIS ALA PRO TYR THR PHE GLY SEQRES 9 L 219 GLY GLY THR LYS LEU GLU ILE LYS ARG ALA ASP ALA ALA SEQRES 10 L 219 PRO THR VAL SER ILE PHE PRO PRO SER SER GLU GLN LEU SEQRES 11 L 219 THR SER GLY GLY ALA SER VAL VAL CYS PHE LEU ASN ASN SEQRES 12 L 219 PHE TYR PRO LYS ASP ILE ASN VAL LYS TRP LYS ILE ASP SEQRES 13 L 219 GLY SER GLU ARG GLN ASN GLY VAL LEU ASN SER TRP THR SEQRES 14 L 219 ASP GLN ASP SER LYS ASP SER THR TYR SER MET SER SER SEQRES 15 L 219 THR LEU THR LEU THR LYS ASP GLU TYR GLU ARG HIS ASN SEQRES 16 L 219 SER TYR THR CYS GLU ALA THR HIS LYS THR SER THR SER SEQRES 17 L 219 PRO ILE VAL LYS SER PHE ASN ARG ASN GLU CYS SEQRES 1 H 231 GLU VAL LYS LEU VAL GLU SER GLY GLY GLY LEU VAL LYS SEQRES 2 H 231 PRO GLY GLY SER LEU LYS LEU SER CYS ALA ALA SER GLY SEQRES 3 H 231 PHE ILE PHE SER ASN TYR ALA MET SER TRP VAL ARG GLN SEQRES 4 H 231 THR PRO GLU LYS ARG LEU GLU TRP VAL ALA THR ILE SER SEQRES 5 H 231 GLY GLY GLY ARG ASN ILE TYR SER LEU ASP SER VAL LYS SEQRES 6 H 231 GLY ARG PHE THR PHE PHE ARG ASP ASN ALA ARG ASN THR SEQRES 7 H 231 LEU TYR LEU GLN MET SER SER LEU ARG SER GLU ASP THR SEQRES 8 H 231 ALA MET TYR PHE CYS SER ARG GLU ASN TYR GLY SER SER SEQRES 9 H 231 PHE THR TYR TRP GLY GLN GLY THR LEU VAL THR VAL SER SEQRES 10 H 231 SER ALA LYS THR THR PRO PRO SER VAL TYR PRO LEU ALA SEQRES 11 H 231 PRO GLY SER ALA ALA GLN THR ASN SER MET VAL THR LEU SEQRES 12 H 231 GLY CYS LEU VAL LYS GLY TYR PHE PRO GLU PRO VAL THR SEQRES 13 H 231 VAL THR TRP ASN SER GLY SER LEU SER SER GLY VAL HIS SEQRES 14 H 231 THR PHE PRO ALA VAL LEU GLN SER ASP LEU TYR THR LEU SEQRES 15 H 231 SER SER SER VAL THR VAL PRO SER SER THR TRP PRO SER SEQRES 16 H 231 GLU THR VAL THR CYS ASN VAL ALA HIS PRO ALA SER SER SEQRES 17 H 231 THR LYS VAL ASP LYS LYS ILE VAL PRO ARG ASP CYS ALA SEQRES 18 H 231 ALA ALA LEU GLU HIS HIS HIS HIS HIS HIS SEQRES 1 K 11 ALA GLU PRO TRP THR VAL ARG ASN GLU ASP LEU HET SO4 H 301 5 HET SO4 H 302 5 HETNAM SO4 SULFATE ION FORMUL 4 SO4 2(O4 S 2-) FORMUL 6 HOH *15(H2 O) HELIX 1 1 GLU L 84 LEU L 88 5 5 HELIX 2 2 SER L 126 SER L 132 1 7 HELIX 3 3 LYS L 188 GLU L 192 1 5 HELIX 4 4 ASN L 217 CYS L 219 5 3 HELIX 5 5 ILE H 28 TYR H 32 5 5 HELIX 6 6 ASP H 62 LYS H 65 5 4 HELIX 7 7 ASN H 74 ARG H 76 5 3 HELIX 8 8 ARG H 87 THR H 91 5 5 HELIX 9 9 SER H 161 SER H 163 5 3 HELIX 10 10 PRO H 205 SER H 208 5 4 SHEET 1 A 4 MET L 4 THR L 7 0 SHEET 2 A 4 ALA L 19 SER L 25 -1 O ARG L 24 N THR L 5 SHEET 3 A 4 ASP L 75 ILE L 80 -1 O PHE L 76 N CYS L 23 SHEET 4 A 4 PHE L 67 SER L 72 -1 N SER L 68 O LYS L 79 SHEET 1 B 6 SER L 10 VAL L 13 0 SHEET 2 B 6 THR L 107 ILE L 111 1 O GLU L 110 N LEU L 11 SHEET 3 B 6 GLY L 89 GLN L 95 -1 N GLY L 89 O LEU L 109 SHEET 4 B 6 LEU L 38 GLN L 43 -1 N TYR L 41 O TYR L 92 SHEET 5 B 6 LYS L 50 TYR L 54 -1 O ILE L 53 N TRP L 40 SHEET 6 B 6 ASN L 58 ARG L 59 -1 O ASN L 58 N TYR L 54 SHEET 1 C 4 SER L 10 VAL L 13 0 SHEET 2 C 4 THR L 107 ILE L 111 1 O GLU L 110 N LEU L 11 SHEET 3 C 4 GLY L 89 GLN L 95 -1 N GLY L 89 O LEU L 109 SHEET 4 C 4 THR L 102 PHE L 103 -1 O THR L 102 N GLN L 95 SHEET 1 D 4 THR L 119 PHE L 123 0 SHEET 2 D 4 GLY L 134 PHE L 144 -1 O ASN L 142 N THR L 119 SHEET 3 D 4 TYR L 178 THR L 187 -1 O LEU L 184 N VAL L 137 SHEET 4 D 4 VAL L 164 TRP L 168 -1 N LEU L 165 O THR L 183 SHEET 1 E 4 SER L 158 ARG L 160 0 SHEET 2 E 4 ASN L 150 ILE L 155 -1 N ILE L 155 O SER L 158 SHEET 3 E 4 SER L 196 THR L 202 -1 O GLU L 200 N LYS L 152 SHEET 4 E 4 ILE L 210 ASN L 215 -1 O LYS L 212 N CYS L 199 SHEET 1 F 4 LYS H 3 SER H 7 0 SHEET 2 F 4 LEU H 18 SER H 25 -1 O SER H 25 N LYS H 3 SHEET 3 F 4 THR H 78 MET H 83 -1 O MET H 83 N LEU H 18 SHEET 4 F 4 PHE H 68 ASP H 73 -1 N THR H 69 O GLN H 82 SHEET 1 G 6 LEU H 11 VAL H 12 0 SHEET 2 G 6 THR H 112 VAL H 116 1 O THR H 115 N VAL H 12 SHEET 3 G 6 ALA H 92 ASN H 100 -1 N TYR H 94 O THR H 112 SHEET 4 G 6 MET H 34 GLN H 39 -1 N VAL H 37 O PHE H 95 SHEET 5 G 6 LEU H 45 ILE H 51 -1 O GLU H 46 N ARG H 38 SHEET 6 G 6 ILE H 58 SER H 60 -1 O TYR H 59 N THR H 50 SHEET 1 H 4 LEU H 11 VAL H 12 0 SHEET 2 H 4 THR H 112 VAL H 116 1 O THR H 115 N VAL H 12 SHEET 3 H 4 ALA H 92 ASN H 100 -1 N TYR H 94 O THR H 112 SHEET 4 H 4 SER H 103 TRP H 108 -1 O THR H 106 N ARG H 98 SHEET 1 I 4 SER H 125 LEU H 129 0 SHEET 2 I 4 MET H 140 TYR H 150 -1 O GLY H 144 N LEU H 129 SHEET 3 I 4 LEU H 179 PRO H 189 -1 O VAL H 188 N VAL H 141 SHEET 4 I 4 VAL H 168 THR H 170 -1 N HIS H 169 O SER H 185 SHEET 1 J 4 SER H 125 LEU H 129 0 SHEET 2 J 4 MET H 140 TYR H 150 -1 O GLY H 144 N LEU H 129 SHEET 3 J 4 LEU H 179 PRO H 189 -1 O VAL H 188 N VAL H 141 SHEET 4 J 4 VAL H 174 GLN H 176 -1 N GLN H 176 O LEU H 179 SHEET 1 K 3 THR H 156 TRP H 159 0 SHEET 2 K 3 THR H 199 HIS H 204 -1 O ASN H 201 N THR H 158 SHEET 3 K 3 THR H 209 LYS H 214 -1 O VAL H 211 N VAL H 202 SSBOND 1 CYS L 23 CYS L 93 1555 1555 2.07 SSBOND 2 CYS L 139 CYS L 199 1555 1555 2.03 SSBOND 3 CYS H 22 CYS H 96 1555 1555 2.07 SSBOND 4 CYS H 145 CYS H 200 1555 1555 2.06 CISPEP 1 THR L 7 PRO L 8 0 -4.22 CISPEP 2 ALA L 99 PRO L 100 0 6.20 CISPEP 3 TYR L 145 PRO L 146 0 1.07 CISPEP 4 THR H 137 ASN H 138 0 7.36 CISPEP 5 PHE H 151 PRO H 152 0 -15.21 CISPEP 6 GLU H 153 PRO H 154 0 -1.12 CISPEP 7 TRP H 193 PRO H 194 0 14.65 SITE 1 AC1 4 SER H 52 GLY H 54 GLY H 55 ARG H 56 SITE 1 AC2 5 TYR H 127 LYS H 148 GLN L 129 SER L 132 SITE 2 AC2 5 GLY L 134 SITE 1 AC3 21 ASN H 31 ALA H 33 THR H 50 SER H 52 SITE 2 AC3 21 GLY H 53 ASN H 57 TYR H 59 GLU H 99 SITE 3 AC3 21 ASN H 100 TYR H 101 GLY H 102 SER H 103 SITE 4 AC3 21 SER H 104 HIS L 31 ASN L 35 TYR L 37 SITE 5 AC3 21 LYS L 55 GLY L 96 TYR L 101 ASP L 148 SITE 6 AC3 21 LYS L 204 CRYST1 79.560 79.560 93.600 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012569 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012569 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010684 0.00000