HEADER CELL INVASION 04-AUG-14 4R1B TITLE CRYSTAL STRUCTURE OF 3D7 STRAIN PLASMODIUM FALCIPARUM AMA1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: APICAL MEMBRANE ANTIGEN 1, AMA1; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 104-438; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PLASMODIUM FALCIPARUM 3D7; SOURCE 3 ORGANISM_TAXID: 36329; SOURCE 4 STRAIN: ISOLATE 3D7; SOURCE 5 GENE: AMA1, PF11_0344; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21 DE3 KEYWDS PAN FOLD, ERYTHROCYTE INVASION BY MEROZOITES, RON2, MOVING JUNCTION KEYWDS 2 COMPLEX, CELL INVASION EXPDTA X-RAY DIFFRACTION AUTHOR S.S.LIM,R.S.NORTON,S.MCGOWAN REVDAT 2 20-SEP-23 4R1B 1 REMARK REVDAT 1 14-JAN-15 4R1B 0 JRNL AUTH S.S.LIM,W.YANG,B.KRISHNARJUNA,K.KANNAN SIVARAMAN, JRNL AUTH 2 I.R.CHANDRASHEKARAN,I.KASS,C.A.MACRAILD,S.M.DEVINE, JRNL AUTH 3 C.O.DEBONO,R.F.ANDERS,M.J.SCANLON,P.J.SCAMMELLS,R.S.NORTON, JRNL AUTH 4 S.MCGOWAN JRNL TITL STRUCTURE AND DYNAMICS OF APICAL MEMBRANE ANTIGEN 1 FROM JRNL TITL 2 PLASMODIUM FALCIPARUM FVO. JRNL REF BIOCHEMISTRY V. 53 7310 2014 JRNL REFN ISSN 0006-2960 JRNL PMID 25360546 JRNL DOI 10.1021/BI5012089 REMARK 2 REMARK 2 RESOLUTION. 1.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.8.4_1496) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 37.45 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 40228 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.183 REMARK 3 R VALUE (WORKING SET) : 0.182 REMARK 3 FREE R VALUE : 0.209 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.010 REMARK 3 FREE R VALUE TEST SET COUNT : 2016 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 37.4540 - 3.8549 1.00 2829 137 0.1650 0.1706 REMARK 3 2 3.8549 - 3.0602 1.00 2763 131 0.1575 0.1928 REMARK 3 3 3.0602 - 2.6735 1.00 2730 138 0.1734 0.2157 REMARK 3 4 2.6735 - 2.4291 1.00 2775 135 0.1743 0.2137 REMARK 3 5 2.4291 - 2.2550 1.00 2710 143 0.1656 0.1969 REMARK 3 6 2.2550 - 2.1221 1.00 2724 167 0.1642 0.1771 REMARK 3 7 2.1221 - 2.0158 1.00 2706 153 0.1698 0.2039 REMARK 3 8 2.0158 - 1.9281 1.00 2706 157 0.1785 0.2166 REMARK 3 9 1.9281 - 1.8539 1.00 2716 137 0.2104 0.2359 REMARK 3 10 1.8539 - 1.7899 1.00 2710 146 0.2108 0.2667 REMARK 3 11 1.7899 - 1.7339 1.00 2706 154 0.2245 0.2271 REMARK 3 12 1.7339 - 1.6844 1.00 2696 114 0.2518 0.2951 REMARK 3 13 1.6844 - 1.6400 1.00 2726 162 0.2741 0.2917 REMARK 3 14 1.6400 - 1.6000 1.00 2715 142 0.2921 0.2813 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.170 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 21.220 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 2244 REMARK 3 ANGLE : 0.986 3043 REMARK 3 CHIRALITY : 0.042 331 REMARK 3 PLANARITY : 0.005 398 REMARK 3 DIHEDRAL : 12.503 797 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ALL REMARK 3 ORIGIN FOR THE GROUP (A): -26.3118 11.5211 104.7439 REMARK 3 T TENSOR REMARK 3 T11: 0.2142 T22: 0.0986 REMARK 3 T33: 0.0985 T12: -0.0007 REMARK 3 T13: 0.0647 T23: -0.0016 REMARK 3 L TENSOR REMARK 3 L11: 1.8294 L22: 3.0142 REMARK 3 L33: 1.7969 L12: 0.2393 REMARK 3 L13: -0.2561 L23: 0.0406 REMARK 3 S TENSOR REMARK 3 S11: 0.0193 S12: 0.2427 S13: 0.0284 REMARK 3 S21: -0.6846 S22: 0.0157 S23: -0.2869 REMARK 3 S31: -0.0883 S32: 0.0670 S33: -0.0032 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4R1B COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 11-AUG-14. REMARK 100 THE DEPOSITION ID IS D_1000086774. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 30-NOV-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : AUSTRALIAN SYNCHROTRON REMARK 200 BEAMLINE : MX2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9537 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL SILICON 111 REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 40241 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.600 REMARK 200 RESOLUTION RANGE LOW (A) : 41.070 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 8.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASES REMARK 200 STARTING MODEL: PDB ID: 1Z40 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 38.61 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.00 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 12-15% (V/V) POLYETHYLENE GLYCOL 3350, REMARK 280 0.02 M MES AND 10 MM MANGANESE CHLORIDE. CRYSTALS WERE REMARK 280 DEHYDRATED OVERNIGHT IN RESERVOIR SOLUTION WITH INCREASED (35%) REMARK 280 (V/V) POLYETHYLENE GLYCOL 3350 BEFORE CRYO-STABILISATION IN 38% REMARK 280 (V/V) POLYETHYLENE GLYCOL 3350, 0.088 M MES (PH 6.0) AND 44 MM REMARK 280 MANGANESE CHLORIDE FOR 6-8 H PRIOR TO DATA COLLECTION. MILLIQ REMARK 280 WATER WAS ADDED TO THE STABILISATION SOLUTION, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 37.46000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 25.70800 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 37.46000 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 25.70800 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ASN A 104 REMARK 465 TYR A 105 REMARK 465 MET A 106 REMARK 465 GLY A 107 REMARK 465 GLU A 159 REMARK 465 ASN A 160 REMARK 465 GLY A 172 REMARK 465 ASN A 173 REMARK 465 GLN A 174 REMARK 465 TYR A 175 REMARK 465 LEU A 176 REMARK 465 LYS A 177 REMARK 465 ASP A 178 REMARK 465 GLY A 179 REMARK 465 GLY A 259 REMARK 465 PRO A 260 REMARK 465 ARG A 261 REMARK 465 TYR A 262 REMARK 465 CYS A 263 REMARK 465 ASN A 264 REMARK 465 LYS A 265 REMARK 465 ASP A 266 REMARK 465 GLU A 267 REMARK 465 SER A 268 REMARK 465 LYS A 269 REMARK 465 ARG A 270 REMARK 465 ASN A 271 REMARK 465 SER A 272 REMARK 465 GLN A 352 REMARK 465 TYR A 353 REMARK 465 GLU A 354 REMARK 465 GLN A 355 REMARK 465 HIS A 356 REMARK 465 LYS A 370 REMARK 465 ASN A 371 REMARK 465 ALA A 372 REMARK 465 SER A 373 REMARK 465 MET A 374 REMARK 465 ILE A 375 REMARK 465 LYS A 376 REMARK 465 SER A 377 REMARK 465 ALA A 378 REMARK 465 PHE A 379 REMARK 465 LEU A 380 REMARK 465 PRO A 381 REMARK 465 THR A 382 REMARK 465 GLY A 383 REMARK 465 ALA A 384 REMARK 465 PHE A 385 REMARK 465 LYS A 386 REMARK 465 ALA A 387 REMARK 465 ASP A 388 REMARK 465 ARG A 389 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 112 CG CD OE1 OE2 REMARK 470 ASN A 162 CG OD1 ND2 REMARK 470 THR A 163 OG1 CG2 REMARK 470 GLU A 187 CG CD OE1 OE2 REMARK 470 ASP A 196 CG OD1 OD2 REMARK 470 LYS A 203 CG CD CE NZ REMARK 470 ASP A 204 CG OD1 OD2 REMARK 470 LYS A 206 CE NZ REMARK 470 TYR A 207 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 LYS A 230 CG CD CE NZ REMARK 470 LYS A 243 CE NZ REMARK 470 MET A 273 CG SD CE REMARK 470 CYS A 275 SG REMARK 470 LYS A 300 CG CD CE NZ REMARK 470 GLN A 349 CG CD OE1 NE2 REMARK 470 LYS A 351 CG CD CE NZ REMARK 470 ASP A 359 CG OD1 OD2 REMARK 470 TYR A 360 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 GLU A 361 CG CD OE1 OE2 REMARK 470 LYS A 362 CG CD CE NZ REMARK 470 TYR A 390 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 LYS A 395 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O GLU A 133 O HOH A 795 1.99 REMARK 500 O HOH A 628 O HOH A 667 2.13 REMARK 500 O HOH A 625 O HOH A 752 2.13 REMARK 500 O HOH A 766 O HOH A 775 2.14 REMARK 500 O HOH A 673 O HOH A 678 2.16 REMARK 500 O HOH A 664 O HOH A 665 2.16 REMARK 500 O HOH A 682 O HOH A 745 2.17 REMARK 500 O HOH A 725 O HOH A 756 2.18 REMARK 500 O HOH A 579 O HOH A 793 2.19 REMARK 500 NE2 GLN A 141 O HOH A 718 2.19 REMARK 500 O HOH A 566 O HOH A 687 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 687 O HOH A 687 2658 1.92 REMARK 500 O PRO A 350 O HOH A 661 4558 2.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 131 57.88 -140.06 REMARK 500 ARG A 304 -71.24 -137.52 REMARK 500 LYS A 368 -31.05 -132.39 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4R19 RELATED DB: PDB REMARK 900 RELATED ID: 4R1A RELATED DB: PDB REMARK 900 RELATED ID: 4R1C RELATED DB: PDB DBREF 4R1B A 104 438 UNP Q7KQK5 Q7KQK5_PLAF7 104 438 SEQRES 1 A 335 ASN TYR MET GLY ASN PRO TRP THR GLU TYR MET ALA LYS SEQRES 2 A 335 TYR ASP ILE GLU GLU VAL HIS GLY SER GLY ILE ARG VAL SEQRES 3 A 335 ASP LEU GLY GLU ASP ALA GLU VAL ALA GLY THR GLN TYR SEQRES 4 A 335 ARG LEU PRO SER GLY LYS CYS PRO VAL PHE GLY LYS GLY SEQRES 5 A 335 ILE ILE ILE GLU ASN SER ASN THR THR PHE LEU THR PRO SEQRES 6 A 335 VAL ALA THR GLY ASN GLN TYR LEU LYS ASP GLY GLY PHE SEQRES 7 A 335 ALA PHE PRO PRO THR GLU PRO LEU MET SER PRO MET THR SEQRES 8 A 335 LEU ASP GLU MET ARG HIS PHE TYR LYS ASP ASN LYS TYR SEQRES 9 A 335 VAL LYS ASN LEU ASP GLU LEU THR LEU CYS SER ARG HIS SEQRES 10 A 335 ALA GLY ASN MET ILE PRO ASP ASN ASP LYS ASN SER ASN SEQRES 11 A 335 TYR LYS TYR PRO ALA VAL TYR ASP ASP LYS ASP LYS LYS SEQRES 12 A 335 CYS HIS ILE LEU TYR ILE ALA ALA GLN GLU ASN ASN GLY SEQRES 13 A 335 PRO ARG TYR CYS ASN LYS ASP GLU SER LYS ARG ASN SER SEQRES 14 A 335 MET PHE CYS PHE ARG PRO ALA LYS ASP ILE SER PHE GLN SEQRES 15 A 335 ASN TYR THR TYR LEU SER LYS ASN VAL VAL ASP ASN TRP SEQRES 16 A 335 GLU LYS VAL CYS PRO ARG LYS ASN LEU GLN ASN ALA LYS SEQRES 17 A 335 PHE GLY LEU TRP VAL ASP GLY ASN CYS GLU ASP ILE PRO SEQRES 18 A 335 HIS VAL ASN GLU PHE PRO ALA ILE ASP LEU PHE GLU CYS SEQRES 19 A 335 ASN LYS LEU VAL PHE GLU LEU SER ALA SER ASP GLN PRO SEQRES 20 A 335 LYS GLN TYR GLU GLN HIS LEU THR ASP TYR GLU LYS ILE SEQRES 21 A 335 LYS GLU GLY PHE LYS ASN LYS ASN ALA SER MET ILE LYS SEQRES 22 A 335 SER ALA PHE LEU PRO THR GLY ALA PHE LYS ALA ASP ARG SEQRES 23 A 335 TYR LYS SER HIS GLY LYS GLY TYR ASN TRP GLY ASN TYR SEQRES 24 A 335 ASN THR GLU THR GLN LYS CYS GLU ILE PHE ASN VAL LYS SEQRES 25 A 335 PRO THR CYS LEU ILE ASN ASN SER SER TYR ILE ALA THR SEQRES 26 A 335 THR ALA LEU SER HIS PRO ILE GLU VAL GLU FORMUL 2 HOH *296(H2 O) HELIX 1 1 TRP A 110 ALA A 115 1 6 HELIX 2 2 ASP A 118 HIS A 123 1 6 HELIX 3 3 LEU A 195 TYR A 202 1 8 HELIX 4 4 ASP A 212 GLY A 222 1 11 HELIX 5 5 ASP A 281 GLN A 285 5 5 HELIX 6 6 ASN A 297 CYS A 302 1 6 HELIX 7 7 ASP A 333 SER A 345 1 13 HELIX 8 8 THR A 358 GLU A 365 1 8 SHEET 1 A 2 GLU A 133 VAL A 137 0 SHEET 2 A 2 THR A 140 LEU A 144 -1 O THR A 140 N VAL A 137 SHEET 1 B 5 VAL A 151 PHE A 152 0 SHEET 2 B 5 TYR A 287 LEU A 290 -1 O TYR A 289 N VAL A 151 SHEET 3 B 5 ALA A 238 ASP A 241 -1 N ALA A 238 O LEU A 290 SHEET 4 B 5 LYS A 246 ILE A 249 -1 O HIS A 248 N VAL A 239 SHEET 5 B 5 MET A 193 THR A 194 -1 N MET A 193 O CYS A 247 SHEET 1 C 2 GLY A 155 ILE A 157 0 SHEET 2 C 2 ARG A 277 ALA A 279 -1 O ARG A 277 N ILE A 157 SHEET 1 D 6 ASN A 327 PRO A 330 0 SHEET 2 D 6 LYS A 408 PHE A 412 -1 O CYS A 409 N PHE A 329 SHEET 3 D 6 TRP A 399 ASN A 403 -1 N ASN A 401 O GLU A 410 SHEET 4 D 6 TYR A 425 THR A 429 -1 O ILE A 426 N TYR A 402 SHEET 5 D 6 ASN A 306 GLN A 308 -1 N LEU A 307 O ALA A 427 SHEET 6 D 6 VAL A 437 GLU A 438 1 O GLU A 438 N GLN A 308 SHEET 1 E 3 ASN A 319 ASP A 322 0 SHEET 2 E 3 LYS A 311 VAL A 316 -1 N VAL A 316 O ASN A 319 SHEET 3 E 3 CYS A 418 ILE A 420 -1 O ILE A 420 N LYS A 311 SSBOND 1 CYS A 149 CYS A 302 1555 1555 2.03 SSBOND 2 CYS A 217 CYS A 247 1555 1555 2.04 SSBOND 3 CYS A 320 CYS A 418 1555 1555 2.04 SSBOND 4 CYS A 337 CYS A 409 1555 1555 2.07 CISPEP 1 GLU A 187 PRO A 188 0 -1.02 CISPEP 2 SER A 191 PRO A 192 0 -3.54 CRYST1 74.920 51.416 87.567 90.00 114.30 90.00 C 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013348 0.000000 0.006027 0.00000 SCALE2 0.000000 0.019449 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012530 0.00000