HEADER TRANSFERASE/TRANSFERASE INHIBITOR 08-AUG-14 4R23 TITLE STRUCTURE OF A PUTATIVE PEPTIDOGLYCAN GLYCOSYLTRANSFERASE FROM TITLE 2 ATOPOBIUM PARVULUM IN COMPLEX WITH DICLOXACILLIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: PEPTIDOGLYCAN GLYCOSYLTRANSFERASE; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: RESIDUES 505-954; COMPND 5 EC: 2.4.1.129; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ATOPOBIUM PARVULUM DSM 20469; SOURCE 3 ORGANISM_TAXID: 521095; SOURCE 4 STRAIN: ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546; SOURCE 5 GENE: APAR_1344; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3) MAGIC; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PMCSG68 KEYWDS STRUCTURAL GENOMICS, PSI-BIOLOGY, MIDWEST CENTER FOR STRUCTURAL KEYWDS 2 GENOMICS, MCSG, PENICILLIN-BINDING PROTEIN, TRANSFERASE, KEYWDS 3 TRANSFERASE-TRANSFERASE INHIBITOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR E.V.FILIPPOVA,G.MINASOV,O.KIRYUKHINA,S.CLANCY,A.JOACHIMIAK, AUTHOR 2 W.F.ANDERSON,MIDWEST CENTER FOR STRUCTURAL GENOMICS (MCSG) REVDAT 4 06-DEC-23 4R23 1 REMARK REVDAT 3 20-SEP-23 4R23 1 COMPND REMARK SEQADV HETNAM REVDAT 3 2 1 LINK REVDAT 2 22-NOV-17 4R23 1 REMARK REVDAT 1 17-SEP-14 4R23 0 JRNL AUTH E.V.FILIPPOVA,G.MINASOV,O.KIRYUKHINA,S.CLANCY,A.JOACHIMIAK, JRNL AUTH 2 W.F.ANDERSON JRNL TITL STRUCTURE OF A PUTATIVE PEPTIDOGLYCAN GLYCOSYLTRANSFERASE JRNL TITL 2 FROM ATOPOBIUM PARVULUM IN COMPLEX WITH DICLOXACILLIN JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.84 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0069 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.84 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.2 REMARK 3 NUMBER OF REFLECTIONS : 85416 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.157 REMARK 3 R VALUE (WORKING SET) : 0.155 REMARK 3 FREE R VALUE : 0.192 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 4501 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.84 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.89 REMARK 3 REFLECTION IN BIN (WORKING SET) : 5489 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 85.76 REMARK 3 BIN R VALUE (WORKING SET) : 0.2740 REMARK 3 BIN FREE R VALUE SET COUNT : 313 REMARK 3 BIN FREE R VALUE : 0.2800 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5950 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 105 REMARK 3 SOLVENT ATOMS : 426 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 40.70 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 41.52 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.29000 REMARK 3 B22 (A**2) : 0.40000 REMARK 3 B33 (A**2) : -0.05000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.27000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.097 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.100 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.082 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 5.784 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.974 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.961 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 6158 ; 0.014 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 5748 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 8380 ; 1.744 ; 1.981 REMARK 3 BOND ANGLES OTHERS (DEGREES): 13213 ; 0.802 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 821 ; 6.417 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 221 ;34.134 ;24.977 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 817 ;13.128 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 22 ;14.769 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 997 ; 0.096 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 7097 ; 0.008 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 1309 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 3305 ; 1.959 ; 2.715 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 3304 ; 1.959 ; 2.714 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 4119 ; 2.866 ; 4.052 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 4120 ; 2.866 ; 4.053 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2853 ; 3.184 ; 3.215 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 2853 ; 3.184 ; 3.215 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 4262 ; 4.694 ; 4.661 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 7065 ; 7.864 ;24.314 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 6898 ; 7.791 ;23.821 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 12 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 522 A 580 REMARK 3 ORIGIN FOR THE GROUP (A): -0.5418 -0.9816 -47.6297 REMARK 3 T TENSOR REMARK 3 T11: 0.1131 T22: 0.0757 REMARK 3 T33: 0.2201 T12: 0.0406 REMARK 3 T13: 0.0481 T23: -0.0070 REMARK 3 L TENSOR REMARK 3 L11: 1.4617 L22: 4.2052 REMARK 3 L33: 0.7235 L12: 0.7430 REMARK 3 L13: 0.4071 L23: 0.0405 REMARK 3 S TENSOR REMARK 3 S11: -0.0746 S12: -0.0397 S13: -0.1237 REMARK 3 S21: -0.4412 S22: 0.0408 S23: -0.7233 REMARK 3 S31: 0.1609 S32: 0.1699 S33: 0.0338 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 581 A 603 REMARK 3 ORIGIN FOR THE GROUP (A): 8.0693 -6.0800 -61.3784 REMARK 3 T TENSOR REMARK 3 T11: 0.3032 T22: 0.1402 REMARK 3 T33: 0.2932 T12: 0.0138 REMARK 3 T13: 0.1724 T23: -0.0192 REMARK 3 L TENSOR REMARK 3 L11: 5.6662 L22: 7.1044 REMARK 3 L33: 1.6238 L12: -6.1019 REMARK 3 L13: -2.5766 L23: 3.2546 REMARK 3 S TENSOR REMARK 3 S11: 0.5622 S12: 0.3035 S13: 0.1830 REMARK 3 S21: -0.6574 S22: -0.2537 S23: -0.4066 REMARK 3 S31: -0.3562 S32: -0.0370 S33: -0.3085 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 605 A 667 REMARK 3 ORIGIN FOR THE GROUP (A): -9.4480 9.8955 -42.4339 REMARK 3 T TENSOR REMARK 3 T11: 0.0487 T22: 0.0717 REMARK 3 T33: 0.0928 T12: 0.0126 REMARK 3 T13: -0.0255 T23: -0.0283 REMARK 3 L TENSOR REMARK 3 L11: 1.3322 L22: 2.6235 REMARK 3 L33: 1.1910 L12: -0.2693 REMARK 3 L13: -0.2370 L23: -0.6861 REMARK 3 S TENSOR REMARK 3 S11: -0.0836 S12: -0.1511 S13: -0.0364 REMARK 3 S21: 0.0762 S22: 0.0886 S23: -0.3743 REMARK 3 S31: 0.1225 S32: 0.1479 S33: -0.0050 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 668 A 865 REMARK 3 ORIGIN FOR THE GROUP (A): -27.1370 22.4115 -52.0645 REMARK 3 T TENSOR REMARK 3 T11: 0.0691 T22: 0.0504 REMARK 3 T33: 0.0205 T12: -0.0181 REMARK 3 T13: 0.0145 T23: 0.0037 REMARK 3 L TENSOR REMARK 3 L11: 0.7108 L22: 1.9424 REMARK 3 L33: 0.4908 L12: -0.5583 REMARK 3 L13: 0.1820 L23: -0.2065 REMARK 3 S TENSOR REMARK 3 S11: 0.0337 S12: -0.0261 S13: -0.0346 REMARK 3 S21: -0.0968 S22: 0.0343 S23: 0.0542 REMARK 3 S31: -0.0107 S32: -0.0113 S33: -0.0680 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 866 A 901 REMARK 3 ORIGIN FOR THE GROUP (A): -25.7773 25.9181 -37.5618 REMARK 3 T TENSOR REMARK 3 T11: 0.1066 T22: 0.0903 REMARK 3 T33: 0.0195 T12: 0.0104 REMARK 3 T13: -0.0029 T23: -0.0165 REMARK 3 L TENSOR REMARK 3 L11: 1.8160 L22: 3.4096 REMARK 3 L33: 2.5880 L12: -0.1392 REMARK 3 L13: -0.7686 L23: -0.1227 REMARK 3 S TENSOR REMARK 3 S11: -0.0734 S12: -0.2496 S13: 0.0484 REMARK 3 S21: 0.2383 S22: 0.1531 S23: 0.0208 REMARK 3 S31: -0.0557 S32: -0.1000 S33: -0.0797 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 902 A 950 REMARK 3 ORIGIN FOR THE GROUP (A): -18.0130 21.8688 -37.7622 REMARK 3 T TENSOR REMARK 3 T11: 0.1086 T22: 0.0981 REMARK 3 T33: 0.0718 T12: 0.0077 REMARK 3 T13: -0.0097 T23: -0.0305 REMARK 3 L TENSOR REMARK 3 L11: 1.0460 L22: 2.0089 REMARK 3 L33: 1.1976 L12: 0.0800 REMARK 3 L13: 0.2380 L23: 0.0985 REMARK 3 S TENSOR REMARK 3 S11: -0.0547 S12: -0.1865 S13: 0.0811 REMARK 3 S21: 0.2903 S22: 0.0990 S23: -0.2340 REMARK 3 S31: 0.0340 S32: 0.0197 S33: -0.0442 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 523 B 576 REMARK 3 ORIGIN FOR THE GROUP (A): -7.1640 49.2527 -9.9203 REMARK 3 T TENSOR REMARK 3 T11: 0.1326 T22: 0.0876 REMARK 3 T33: 0.4226 T12: -0.0554 REMARK 3 T13: 0.0703 T23: -0.0377 REMARK 3 L TENSOR REMARK 3 L11: 0.4217 L22: 3.6880 REMARK 3 L33: 0.4520 L12: -0.0423 REMARK 3 L13: 0.0755 L23: -1.2079 REMARK 3 S TENSOR REMARK 3 S11: -0.0317 S12: 0.1052 S13: 0.0659 REMARK 3 S21: 0.3250 S22: -0.1130 S23: -0.7683 REMARK 3 S31: -0.1728 S32: 0.0829 S33: 0.1447 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 577 B 603 REMARK 3 ORIGIN FOR THE GROUP (A): -1.2253 53.0093 2.9120 REMARK 3 T TENSOR REMARK 3 T11: 0.3578 T22: 0.2055 REMARK 3 T33: 0.3681 T12: 0.0594 REMARK 3 T13: -0.1141 T23: -0.0219 REMARK 3 L TENSOR REMARK 3 L11: 8.2710 L22: 6.8156 REMARK 3 L33: 1.2205 L12: 7.4834 REMARK 3 L13: 2.2377 L23: 2.1841 REMARK 3 S TENSOR REMARK 3 S11: 0.4340 S12: -0.2614 S13: -0.2290 REMARK 3 S21: 0.4892 S22: -0.1755 S23: -0.2873 REMARK 3 S31: 0.4392 S32: 0.2276 S33: -0.2585 REMARK 3 REMARK 3 TLS GROUP : 9 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 606 B 655 REMARK 3 ORIGIN FOR THE GROUP (A): -16.1211 35.8553 -14.2910 REMARK 3 T TENSOR REMARK 3 T11: 0.0897 T22: 0.0606 REMARK 3 T33: 0.1368 T12: -0.0030 REMARK 3 T13: 0.0777 T23: -0.0261 REMARK 3 L TENSOR REMARK 3 L11: 1.4518 L22: 3.2459 REMARK 3 L33: 1.3650 L12: 0.2256 REMARK 3 L13: 0.1198 L23: -1.0152 REMARK 3 S TENSOR REMARK 3 S11: -0.0392 S12: 0.1281 S13: 0.0395 REMARK 3 S21: -0.1638 S22: 0.1241 S23: -0.4542 REMARK 3 S31: -0.1313 S32: 0.0952 S33: -0.0850 REMARK 3 REMARK 3 TLS GROUP : 10 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 656 B 884 REMARK 3 ORIGIN FOR THE GROUP (A): -33.3200 25.6558 -6.1749 REMARK 3 T TENSOR REMARK 3 T11: 0.0483 T22: 0.0438 REMARK 3 T33: 0.0269 T12: 0.0205 REMARK 3 T13: -0.0046 T23: 0.0114 REMARK 3 L TENSOR REMARK 3 L11: 0.7703 L22: 2.5674 REMARK 3 L33: 0.6411 L12: 0.3788 REMARK 3 L13: -0.2867 L23: -0.1510 REMARK 3 S TENSOR REMARK 3 S11: 0.0447 S12: 0.0325 S13: 0.1063 REMARK 3 S21: 0.0256 S22: 0.0316 S23: 0.1391 REMARK 3 S31: -0.0003 S32: -0.0366 S33: -0.0764 REMARK 3 REMARK 3 TLS GROUP : 11 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 885 B 923 REMARK 3 ORIGIN FOR THE GROUP (A): -29.3068 25.9692 -16.1463 REMARK 3 T TENSOR REMARK 3 T11: 0.1029 T22: 0.0735 REMARK 3 T33: 0.0212 T12: -0.0020 REMARK 3 T13: 0.0182 T23: 0.0138 REMARK 3 L TENSOR REMARK 3 L11: 2.6465 L22: 4.4132 REMARK 3 L33: 1.4856 L12: -0.6885 REMARK 3 L13: 0.3821 L23: 0.0374 REMARK 3 S TENSOR REMARK 3 S11: 0.0292 S12: 0.1212 S13: 0.1099 REMARK 3 S21: -0.3671 S22: 0.0694 S23: 0.0311 REMARK 3 S31: -0.0168 S32: -0.0507 S33: -0.0986 REMARK 3 REMARK 3 TLS GROUP : 12 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 924 B 950 REMARK 3 ORIGIN FOR THE GROUP (A): -23.8880 27.7633 -22.7061 REMARK 3 T TENSOR REMARK 3 T11: 0.2678 T22: 0.1115 REMARK 3 T33: 0.0736 T12: -0.0209 REMARK 3 T13: 0.1079 T23: -0.0234 REMARK 3 L TENSOR REMARK 3 L11: 8.6679 L22: 2.0782 REMARK 3 L33: 1.0913 L12: -1.0462 REMARK 3 L13: 1.6116 L23: -0.2955 REMARK 3 S TENSOR REMARK 3 S11: -0.0556 S12: 0.5156 S13: 0.0054 REMARK 3 S21: -0.6280 S22: 0.1331 S23: -0.2966 REMARK 3 S31: -0.1704 S32: -0.0149 S33: -0.0775 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 4R23 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 20-AUG-14. REMARK 100 THE DEPOSITION ID IS D_1000086801. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 09-DEC-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 21-ID-F REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97872 REMARK 200 MONOCHROMATOR : C(111) REMARK 200 OPTICS : BERYLLIUM LENSES REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 91253 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.840 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 3.800 REMARK 200 R MERGE (I) : 0.08000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 22.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.84 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.87 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.8 REMARK 200 DATA REDUNDANCY IN SHELL : 3.70 REMARK 200 R MERGE FOR SHELL (I) : 0.64000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 4QJG REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.50 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.65 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M TRI-SODIUM CITRATE, 0.1 M TRIS, REMARK 280 15% PEG400, PH 8.5, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE REMARK 280 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 34.94100 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MSE A 473 REMARK 465 HIS A 474 REMARK 465 HIS A 475 REMARK 465 HIS A 476 REMARK 465 HIS A 477 REMARK 465 HIS A 478 REMARK 465 HIS A 479 REMARK 465 SER A 480 REMARK 465 SER A 481 REMARK 465 GLY A 482 REMARK 465 VAL A 483 REMARK 465 ASP A 484 REMARK 465 LEU A 485 REMARK 465 TRP A 486 REMARK 465 SER A 487 REMARK 465 HIS A 488 REMARK 465 PRO A 489 REMARK 465 GLN A 490 REMARK 465 PHE A 491 REMARK 465 GLU A 492 REMARK 465 LYS A 493 REMARK 465 GLY A 494 REMARK 465 THR A 495 REMARK 465 GLU A 496 REMARK 465 ASN A 497 REMARK 465 LEU A 498 REMARK 465 TYR A 499 REMARK 465 PHE A 500 REMARK 465 GLN A 501 REMARK 465 SER A 502 REMARK 465 ASN A 503 REMARK 465 ALA A 504 REMARK 465 ILE A 505 REMARK 465 ASP A 506 REMARK 465 ALA A 507 REMARK 465 PRO A 508 REMARK 465 ARG A 509 REMARK 465 LEU A 510 REMARK 465 GLN A 511 REMARK 465 ALA A 512 REMARK 465 LEU A 513 REMARK 465 PRO A 514 REMARK 465 THR A 515 REMARK 465 ASN A 516 REMARK 465 ASN A 517 REMARK 465 HIS A 518 REMARK 465 THR A 519 REMARK 465 ILE A 520 REMARK 465 ALA A 521 REMARK 465 ALA A 588 REMARK 465 ASP A 589 REMARK 465 HIS A 590 REMARK 465 SER A 591 REMARK 465 ASP A 592 REMARK 465 TRP A 593 REMARK 465 ASN A 604 REMARK 465 ILE A 661 REMARK 465 GLU A 662 REMARK 465 SER A 663 REMARK 465 GLY A 664 REMARK 465 THR A 665 REMARK 465 GLY A 666 REMARK 465 GLY A 951 REMARK 465 ALA A 952 REMARK 465 ALA A 953 REMARK 465 SER A 954 REMARK 465 MSE B 473 REMARK 465 HIS B 474 REMARK 465 HIS B 475 REMARK 465 HIS B 476 REMARK 465 HIS B 477 REMARK 465 HIS B 478 REMARK 465 HIS B 479 REMARK 465 SER B 480 REMARK 465 SER B 481 REMARK 465 GLY B 482 REMARK 465 VAL B 483 REMARK 465 ASP B 484 REMARK 465 LEU B 485 REMARK 465 TRP B 486 REMARK 465 SER B 487 REMARK 465 HIS B 488 REMARK 465 PRO B 489 REMARK 465 GLN B 490 REMARK 465 PHE B 491 REMARK 465 GLU B 492 REMARK 465 LYS B 493 REMARK 465 GLY B 494 REMARK 465 THR B 495 REMARK 465 GLU B 496 REMARK 465 ASN B 497 REMARK 465 LEU B 498 REMARK 465 TYR B 499 REMARK 465 PHE B 500 REMARK 465 GLN B 501 REMARK 465 SER B 502 REMARK 465 ASN B 503 REMARK 465 ALA B 504 REMARK 465 ILE B 505 REMARK 465 ASP B 506 REMARK 465 ALA B 507 REMARK 465 PRO B 508 REMARK 465 ARG B 509 REMARK 465 LEU B 510 REMARK 465 GLN B 511 REMARK 465 ALA B 512 REMARK 465 LEU B 513 REMARK 465 PRO B 514 REMARK 465 THR B 515 REMARK 465 ASN B 516 REMARK 465 ASN B 517 REMARK 465 HIS B 518 REMARK 465 THR B 519 REMARK 465 ILE B 520 REMARK 465 ALA B 521 REMARK 465 LYS B 522 REMARK 465 GLY B 586 REMARK 465 HIS B 587 REMARK 465 ALA B 588 REMARK 465 ASP B 589 REMARK 465 HIS B 590 REMARK 465 SER B 591 REMARK 465 ASP B 592 REMARK 465 TRP B 593 REMARK 465 ASN B 604 REMARK 465 THR B 605 REMARK 465 ILE B 660 REMARK 465 ILE B 661 REMARK 465 GLU B 662 REMARK 465 SER B 663 REMARK 465 GLY B 664 REMARK 465 THR B 665 REMARK 465 GLY B 666 REMARK 465 GLY B 951 REMARK 465 ALA B 952 REMARK 465 ALA B 953 REMARK 465 SER B 954 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O ILE A 603 OG1 THR A 605 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 651 -163.33 -117.24 REMARK 500 THR A 659 -159.43 -133.17 REMARK 500 ASP A 770 22.18 -145.68 REMARK 500 SER A 874 19.26 -145.57 REMARK 500 VAL A 896 -160.31 -129.93 REMARK 500 ASN A 925 57.44 30.38 REMARK 500 ASP B 547 -36.92 -32.90 REMARK 500 SER B 651 -168.32 -121.17 REMARK 500 ASP B 770 22.04 -145.68 REMARK 500 VAL B 896 -167.85 -121.66 REMARK 500 ASN B 925 63.99 -104.84 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 P4G A 1002 REMARK 610 P4G A 1003 REMARK 610 P4G A 1004 REMARK 610 P4G B 1002 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE DXU A 1001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE P4G A 1002 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE P4G A 1003 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE P4G A 1004 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 1006 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE DXU B 1001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE P4G B 1002 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 1004 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: MCSG-APC110119 RELATED DB: TARGETTRACK REMARK 900 RELATED ID: 4JBF RELATED DB: PDB REMARK 900 RELATED ID: 4N1X RELATED DB: PDB REMARK 900 RELATED ID: 4R0Q RELATED DB: PDB REMARK 900 RELATED ID: 4R1G RELATED DB: PDB DBREF 4R23 A 505 954 UNP C8W8H7 C8W8H7_ATOPD 505 954 DBREF 4R23 B 505 954 UNP C8W8H7 C8W8H7_ATOPD 505 954 SEQADV 4R23 MSE A 473 UNP C8W8H7 EXPRESSION TAG SEQADV 4R23 HIS A 474 UNP C8W8H7 EXPRESSION TAG SEQADV 4R23 HIS A 475 UNP C8W8H7 EXPRESSION TAG SEQADV 4R23 HIS A 476 UNP C8W8H7 EXPRESSION TAG SEQADV 4R23 HIS A 477 UNP C8W8H7 EXPRESSION TAG SEQADV 4R23 HIS A 478 UNP C8W8H7 EXPRESSION TAG SEQADV 4R23 HIS A 479 UNP C8W8H7 EXPRESSION TAG SEQADV 4R23 SER A 480 UNP C8W8H7 EXPRESSION TAG SEQADV 4R23 SER A 481 UNP C8W8H7 EXPRESSION TAG SEQADV 4R23 GLY A 482 UNP C8W8H7 EXPRESSION TAG SEQADV 4R23 VAL A 483 UNP C8W8H7 EXPRESSION TAG SEQADV 4R23 ASP A 484 UNP C8W8H7 EXPRESSION TAG SEQADV 4R23 LEU A 485 UNP C8W8H7 EXPRESSION TAG SEQADV 4R23 TRP A 486 UNP C8W8H7 EXPRESSION TAG SEQADV 4R23 SER A 487 UNP C8W8H7 EXPRESSION TAG SEQADV 4R23 HIS A 488 UNP C8W8H7 EXPRESSION TAG SEQADV 4R23 PRO A 489 UNP C8W8H7 EXPRESSION TAG SEQADV 4R23 GLN A 490 UNP C8W8H7 EXPRESSION TAG SEQADV 4R23 PHE A 491 UNP C8W8H7 EXPRESSION TAG SEQADV 4R23 GLU A 492 UNP C8W8H7 EXPRESSION TAG SEQADV 4R23 LYS A 493 UNP C8W8H7 EXPRESSION TAG SEQADV 4R23 GLY A 494 UNP C8W8H7 EXPRESSION TAG SEQADV 4R23 THR A 495 UNP C8W8H7 EXPRESSION TAG SEQADV 4R23 GLU A 496 UNP C8W8H7 EXPRESSION TAG SEQADV 4R23 ASN A 497 UNP C8W8H7 EXPRESSION TAG SEQADV 4R23 LEU A 498 UNP C8W8H7 EXPRESSION TAG SEQADV 4R23 TYR A 499 UNP C8W8H7 EXPRESSION TAG SEQADV 4R23 PHE A 500 UNP C8W8H7 EXPRESSION TAG SEQADV 4R23 GLN A 501 UNP C8W8H7 EXPRESSION TAG SEQADV 4R23 SER A 502 UNP C8W8H7 EXPRESSION TAG SEQADV 4R23 ASN A 503 UNP C8W8H7 EXPRESSION TAG SEQADV 4R23 ALA A 504 UNP C8W8H7 EXPRESSION TAG SEQADV 4R23 MSE B 473 UNP C8W8H7 EXPRESSION TAG SEQADV 4R23 HIS B 474 UNP C8W8H7 EXPRESSION TAG SEQADV 4R23 HIS B 475 UNP C8W8H7 EXPRESSION TAG SEQADV 4R23 HIS B 476 UNP C8W8H7 EXPRESSION TAG SEQADV 4R23 HIS B 477 UNP C8W8H7 EXPRESSION TAG SEQADV 4R23 HIS B 478 UNP C8W8H7 EXPRESSION TAG SEQADV 4R23 HIS B 479 UNP C8W8H7 EXPRESSION TAG SEQADV 4R23 SER B 480 UNP C8W8H7 EXPRESSION TAG SEQADV 4R23 SER B 481 UNP C8W8H7 EXPRESSION TAG SEQADV 4R23 GLY B 482 UNP C8W8H7 EXPRESSION TAG SEQADV 4R23 VAL B 483 UNP C8W8H7 EXPRESSION TAG SEQADV 4R23 ASP B 484 UNP C8W8H7 EXPRESSION TAG SEQADV 4R23 LEU B 485 UNP C8W8H7 EXPRESSION TAG SEQADV 4R23 TRP B 486 UNP C8W8H7 EXPRESSION TAG SEQADV 4R23 SER B 487 UNP C8W8H7 EXPRESSION TAG SEQADV 4R23 HIS B 488 UNP C8W8H7 EXPRESSION TAG SEQADV 4R23 PRO B 489 UNP C8W8H7 EXPRESSION TAG SEQADV 4R23 GLN B 490 UNP C8W8H7 EXPRESSION TAG SEQADV 4R23 PHE B 491 UNP C8W8H7 EXPRESSION TAG SEQADV 4R23 GLU B 492 UNP C8W8H7 EXPRESSION TAG SEQADV 4R23 LYS B 493 UNP C8W8H7 EXPRESSION TAG SEQADV 4R23 GLY B 494 UNP C8W8H7 EXPRESSION TAG SEQADV 4R23 THR B 495 UNP C8W8H7 EXPRESSION TAG SEQADV 4R23 GLU B 496 UNP C8W8H7 EXPRESSION TAG SEQADV 4R23 ASN B 497 UNP C8W8H7 EXPRESSION TAG SEQADV 4R23 LEU B 498 UNP C8W8H7 EXPRESSION TAG SEQADV 4R23 TYR B 499 UNP C8W8H7 EXPRESSION TAG SEQADV 4R23 PHE B 500 UNP C8W8H7 EXPRESSION TAG SEQADV 4R23 GLN B 501 UNP C8W8H7 EXPRESSION TAG SEQADV 4R23 SER B 502 UNP C8W8H7 EXPRESSION TAG SEQADV 4R23 ASN B 503 UNP C8W8H7 EXPRESSION TAG SEQADV 4R23 ALA B 504 UNP C8W8H7 EXPRESSION TAG SEQRES 1 A 482 MSE HIS HIS HIS HIS HIS HIS SER SER GLY VAL ASP LEU SEQRES 2 A 482 TRP SER HIS PRO GLN PHE GLU LYS GLY THR GLU ASN LEU SEQRES 3 A 482 TYR PHE GLN SER ASN ALA ILE ASP ALA PRO ARG LEU GLN SEQRES 4 A 482 ALA LEU PRO THR ASN ASN HIS THR ILE ALA LYS SER ALA SEQRES 5 A 482 TYR VAL GLN ARG GLY ALA ILE ILE THR SER ASP GLY VAL SEQRES 6 A 482 THR LEU ALA GLU SER VAL LYS GLN ASP ASP GLY THR TYR SEQRES 7 A 482 VAL ARG ASN TYR PRO HIS ASP GLY MSE ALA SER HIS THR SEQRES 8 A 482 VAL GLY TYR ILE SER THR GLN TYR GLY THR ALA GLY ILE SEQRES 9 A 482 GLU SER SER MSE ASN GLU THR LEU THR GLY HIS ALA ASP SEQRES 10 A 482 HIS SER ASP TRP ARG SER ALA LEU TYR SER MSE ALA GLY SEQRES 11 A 482 ILE ASN THR THR GLY SER SER VAL VAL LEU THR ILE ASN SEQRES 12 A 482 SER GLN MSE GLN ALA VAL ALA GLU ALA ALA LEU GLN GLY SEQRES 13 A 482 TYR SER GLY SER ILE VAL VAL MSE ASP PRO SER THR GLY SEQRES 14 A 482 ALA VAL LEU ALA LYS ALA SER SER PRO SER TYR THR HIS SEQRES 15 A 482 ALA GLU LEU GLY THR ILE ILE GLU SER GLY THR GLY SER SEQRES 16 A 482 GLN LEU VAL ASP ARG THR THR GLN ALA LEU TYR SER PRO SEQRES 17 A 482 GLY SER SER PHE LYS THR VAL THR LEU ALA ALA GLY ILE SEQRES 18 A 482 ASP THR HIS LYS THR THR LEU ASP THR THR TYR SER ALA SEQRES 19 A 482 PRO GLY THR MSE GLU ILE GLY GLY GLY THR ILE HIS ASN SEQRES 20 A 482 TYR ALA ASN GLU ASP MSE GLY THR ILE PRO LEU ARG GLU SEQRES 21 A 482 ALA PHE ALA ARG SER SER ASN THR ALA LEU ALA GLN LEU SEQRES 22 A 482 GLY VAL ALA LEU GLY ALA ASP ASN LEU VAL SER TYR ALA SEQRES 23 A 482 ARG ALA PHE GLY TYR GLY THR ALA LEU GLY GLN ASP PHE SEQRES 24 A 482 SER THR THR PRO SER LEU MSE PRO ASN PRO ALA GLU MSE SEQRES 25 A 482 THR THR TRP GLU LEU ALA TRP ALA SER CYS GLY LEU PRO SEQRES 26 A 482 VAL GLY GLU HIS ALA SER PRO ALA GLY PRO GLN THR THR SEQRES 27 A 482 VAL MSE GLN ASN ALA VAL ILE ALA ALA ALA ILE ALA ASN SEQRES 28 A 482 GLY GLY VAL VAL MSE ASN PRO TYR ILE VAL ASP ARG VAL SEQRES 29 A 482 LEU SER PRO GLU GLY ALA VAL VAL SER THR THR SER PRO SEQRES 30 A 482 LYS SER LEU GLY GLN ALA VAL SER ALA ASP THR ALA ALA SEQRES 31 A 482 GLN VAL ARG GLU ALA MSE LEU GLY VAL VAL GLU SER GLY SEQRES 32 A 482 THR GLY MSE GLY ALA ARG VAL PRO GLY VAL LYS ILE ALA SEQRES 33 A 482 GLY LYS THR GLY THR ALA ASP VAL GLU ASN GLY ASN PHE SEQRES 34 A 482 ASN SER PHE PHE ILE GLY PHE ALA PRO TYR ASP HIS PRO SEQRES 35 A 482 THR LEU VAL VAL SER VAL VAL ILE GLU GLY ASN GLY GLU SEQRES 36 A 482 ASN VAL LEU GLY TYR GLY ALA GLN VAL GLY GLY ARG VAL SEQRES 37 A 482 LEU ALA GLN CYS LEU ASN ILE GLN ALA LEU GLY ALA ALA SEQRES 38 A 482 SER SEQRES 1 B 482 MSE HIS HIS HIS HIS HIS HIS SER SER GLY VAL ASP LEU SEQRES 2 B 482 TRP SER HIS PRO GLN PHE GLU LYS GLY THR GLU ASN LEU SEQRES 3 B 482 TYR PHE GLN SER ASN ALA ILE ASP ALA PRO ARG LEU GLN SEQRES 4 B 482 ALA LEU PRO THR ASN ASN HIS THR ILE ALA LYS SER ALA SEQRES 5 B 482 TYR VAL GLN ARG GLY ALA ILE ILE THR SER ASP GLY VAL SEQRES 6 B 482 THR LEU ALA GLU SER VAL LYS GLN ASP ASP GLY THR TYR SEQRES 7 B 482 VAL ARG ASN TYR PRO HIS ASP GLY MSE ALA SER HIS THR SEQRES 8 B 482 VAL GLY TYR ILE SER THR GLN TYR GLY THR ALA GLY ILE SEQRES 9 B 482 GLU SER SER MSE ASN GLU THR LEU THR GLY HIS ALA ASP SEQRES 10 B 482 HIS SER ASP TRP ARG SER ALA LEU TYR SER MSE ALA GLY SEQRES 11 B 482 ILE ASN THR THR GLY SER SER VAL VAL LEU THR ILE ASN SEQRES 12 B 482 SER GLN MSE GLN ALA VAL ALA GLU ALA ALA LEU GLN GLY SEQRES 13 B 482 TYR SER GLY SER ILE VAL VAL MSE ASP PRO SER THR GLY SEQRES 14 B 482 ALA VAL LEU ALA LYS ALA SER SER PRO SER TYR THR HIS SEQRES 15 B 482 ALA GLU LEU GLY THR ILE ILE GLU SER GLY THR GLY SER SEQRES 16 B 482 GLN LEU VAL ASP ARG THR THR GLN ALA LEU TYR SER PRO SEQRES 17 B 482 GLY SER SER PHE LYS THR VAL THR LEU ALA ALA GLY ILE SEQRES 18 B 482 ASP THR HIS LYS THR THR LEU ASP THR THR TYR SER ALA SEQRES 19 B 482 PRO GLY THR MSE GLU ILE GLY GLY GLY THR ILE HIS ASN SEQRES 20 B 482 TYR ALA ASN GLU ASP MSE GLY THR ILE PRO LEU ARG GLU SEQRES 21 B 482 ALA PHE ALA ARG SER SER ASN THR ALA LEU ALA GLN LEU SEQRES 22 B 482 GLY VAL ALA LEU GLY ALA ASP ASN LEU VAL SER TYR ALA SEQRES 23 B 482 ARG ALA PHE GLY TYR GLY THR ALA LEU GLY GLN ASP PHE SEQRES 24 B 482 SER THR THR PRO SER LEU MSE PRO ASN PRO ALA GLU MSE SEQRES 25 B 482 THR THR TRP GLU LEU ALA TRP ALA SER CYS GLY LEU PRO SEQRES 26 B 482 VAL GLY GLU HIS ALA SER PRO ALA GLY PRO GLN THR THR SEQRES 27 B 482 VAL MSE GLN ASN ALA VAL ILE ALA ALA ALA ILE ALA ASN SEQRES 28 B 482 GLY GLY VAL VAL MSE ASN PRO TYR ILE VAL ASP ARG VAL SEQRES 29 B 482 LEU SER PRO GLU GLY ALA VAL VAL SER THR THR SER PRO SEQRES 30 B 482 LYS SER LEU GLY GLN ALA VAL SER ALA ASP THR ALA ALA SEQRES 31 B 482 GLN VAL ARG GLU ALA MSE LEU GLY VAL VAL GLU SER GLY SEQRES 32 B 482 THR GLY MSE GLY ALA ARG VAL PRO GLY VAL LYS ILE ALA SEQRES 33 B 482 GLY LYS THR GLY THR ALA ASP VAL GLU ASN GLY ASN PHE SEQRES 34 B 482 ASN SER PHE PHE ILE GLY PHE ALA PRO TYR ASP HIS PRO SEQRES 35 B 482 THR LEU VAL VAL SER VAL VAL ILE GLU GLY ASN GLY GLU SEQRES 36 B 482 ASN VAL LEU GLY TYR GLY ALA GLN VAL GLY GLY ARG VAL SEQRES 37 B 482 LEU ALA GLN CYS LEU ASN ILE GLN ALA LEU GLY ALA ALA SEQRES 38 B 482 SER MODRES 4R23 MSE A 559 MET SELENOMETHIONINE MODRES 4R23 MSE A 580 MET SELENOMETHIONINE MODRES 4R23 MSE A 600 MET SELENOMETHIONINE MODRES 4R23 MSE A 618 MET SELENOMETHIONINE MODRES 4R23 MSE A 636 MET SELENOMETHIONINE MODRES 4R23 MSE A 710 MET SELENOMETHIONINE MODRES 4R23 MSE A 725 MET SELENOMETHIONINE MODRES 4R23 MSE A 778 MET SELENOMETHIONINE MODRES 4R23 MSE A 784 MET SELENOMETHIONINE MODRES 4R23 MSE A 812 MET SELENOMETHIONINE MODRES 4R23 MSE A 828 MET SELENOMETHIONINE MODRES 4R23 MSE A 868 MET SELENOMETHIONINE MODRES 4R23 MSE A 878 MET SELENOMETHIONINE MODRES 4R23 MSE B 559 MET SELENOMETHIONINE MODRES 4R23 MSE B 580 MET SELENOMETHIONINE MODRES 4R23 MSE B 600 MET SELENOMETHIONINE MODRES 4R23 MSE B 618 MET SELENOMETHIONINE MODRES 4R23 MSE B 636 MET SELENOMETHIONINE MODRES 4R23 MSE B 710 MET SELENOMETHIONINE MODRES 4R23 MSE B 725 MET SELENOMETHIONINE MODRES 4R23 MSE B 778 MET SELENOMETHIONINE MODRES 4R23 MSE B 784 MET SELENOMETHIONINE MODRES 4R23 MSE B 812 MET SELENOMETHIONINE MODRES 4R23 MSE B 828 MET SELENOMETHIONINE MODRES 4R23 MSE B 868 MET SELENOMETHIONINE MODRES 4R23 MSE B 878 MET SELENOMETHIONINE HET MSE A 559 8 HET MSE A 580 8 HET MSE A 600 8 HET MSE A 618 8 HET MSE A 636 8 HET MSE A 710 8 HET MSE A 725 8 HET MSE A 778 8 HET MSE A 784 8 HET MSE A 812 8 HET MSE A 828 8 HET MSE A 868 8 HET MSE A 878 8 HET MSE B 559 8 HET MSE B 580 8 HET MSE B 600 8 HET MSE B 618 8 HET MSE B 636 8 HET MSE B 710 8 HET MSE B 725 8 HET MSE B 778 8 HET MSE B 784 8 HET MSE B 812 8 HET MSE B 828 8 HET MSE B 868 8 HET MSE B 878 8 HET DXU A1001 30 HET P4G A1002 7 HET P4G A1003 7 HET P4G A1004 7 HET EDO A1005 4 HET EDO A1006 4 HET EDO A1007 4 HET DXU B1001 30 HET P4G B1002 4 HET EDO B1003 4 HET EDO B1004 4 HETNAM MSE SELENOMETHIONINE HETNAM DXU (3R,4R,5R)-3-(2,6-DICHLOROPHENYL)-N-{(1R)-1-[(2R,4S)-4- HETNAM 2 DXU (DIHYDROXYMETHYL)-5,5-DIMETHYL-1,3-THIAZOLIDIN-2-YL]- HETNAM 3 DXU 2-OXOETHYL} -5-METHYL-1,2-OXAZOLIDINE-4-CARBOXAMIDE HETNAM P4G 1-ETHOXY-2-(2-ETHOXYETHOXY)ETHANE HETNAM EDO 1,2-ETHANEDIOL HETSYN DXU DICLOXACILLIN - OPEN FORM HETSYN EDO ETHYLENE GLYCOL FORMUL 1 MSE 26(C5 H11 N O2 SE) FORMUL 3 DXU 2(C19 H25 CL2 N3 O5 S) FORMUL 4 P4G 4(C8 H18 O3) FORMUL 7 EDO 5(C2 H6 O2) FORMUL 14 HOH *426(H2 O) HELIX 1 1 LYS A 522 VAL A 526 5 5 HELIX 2 2 ALA A 560 GLY A 565 1 6 HELIX 3 3 GLY A 575 MSE A 580 1 6 HELIX 4 4 MSE A 580 GLY A 586 1 7 HELIX 5 5 LEU A 597 ALA A 601 5 5 HELIX 6 6 ASN A 615 GLN A 627 1 13 HELIX 7 7 HIS A 654 THR A 659 5 6 HELIX 8 8 PRO A 680 SER A 683 5 4 HELIX 9 9 PHE A 684 THR A 695 1 12 HELIX 10 10 TYR A 720 GLU A 723 5 4 HELIX 11 11 LEU A 730 ARG A 736 1 7 HELIX 12 12 SER A 738 GLY A 750 1 13 HELIX 13 13 GLY A 750 PHE A 761 1 12 HELIX 14 14 ASN A 780 MSE A 784 5 5 HELIX 15 15 THR A 785 CYS A 794 1 10 HELIX 16 16 THR A 810 ASN A 823 1 14 HELIX 17 17 SER A 857 GLY A 875 1 19 HELIX 18 18 GLY A 877 ARG A 881 5 5 HELIX 19 19 GLU A 897 GLY A 899 5 3 HELIX 20 20 GLY A 931 LEU A 950 1 20 HELIX 21 21 ALA B 560 GLY B 565 1 6 HELIX 22 22 GLY B 575 MSE B 580 1 6 HELIX 23 23 MSE B 580 THR B 585 1 6 HELIX 24 24 LEU B 597 ALA B 601 5 5 HELIX 25 25 ASN B 615 GLN B 627 1 13 HELIX 26 26 THR B 653 THR B 659 5 7 HELIX 27 27 PRO B 680 SER B 683 5 4 HELIX 28 28 PHE B 684 THR B 695 1 12 HELIX 29 29 TYR B 720 GLU B 723 5 4 HELIX 30 30 LEU B 730 ARG B 736 1 7 HELIX 31 31 SER B 738 GLY B 750 1 13 HELIX 32 32 GLY B 750 PHE B 761 1 12 HELIX 33 33 ASN B 780 MSE B 784 5 5 HELIX 34 34 THR B 785 SER B 793 1 9 HELIX 35 35 THR B 810 ASN B 823 1 14 HELIX 36 36 SER B 857 GLY B 875 1 19 HELIX 37 37 GLY B 877 ARG B 881 5 5 HELIX 38 38 GLU B 897 GLY B 899 5 3 HELIX 39 39 GLY B 931 ALA B 949 1 19 SHEET 1 A 6 TYR A 550 ASN A 553 0 SHEET 2 A 6 THR A 538 LYS A 544 -1 N GLU A 541 O ASN A 553 SHEET 3 A 6 ILE A 531 ILE A 532 -1 N ILE A 531 O LEU A 539 SHEET 4 A 6 SER A 609 LEU A 612 1 O LEU A 612 N ILE A 532 SHEET 5 A 6 VAL A 833 LEU A 837 -1 O ARG A 835 N VAL A 611 SHEET 6 A 6 VAL A 843 THR A 846 -1 O VAL A 844 N VAL A 836 SHEET 1 B 2 TYR A 566 SER A 568 0 SHEET 2 B 2 GLY A 572 ALA A 574 -1 O GLY A 572 N SER A 568 SHEET 1 C 5 VAL A 643 SER A 649 0 SHEET 2 C 5 SER A 630 MSE A 636 -1 N ILE A 633 O ALA A 647 SHEET 3 C 5 LEU A 916 GLU A 923 -1 O GLU A 923 N SER A 630 SHEET 4 C 5 PHE A 901 ALA A 909 -1 N SER A 903 O ILE A 922 SHEET 5 C 5 ALA A 888 ASP A 895 -1 N GLY A 892 O PHE A 904 SHEET 1 D 2 THR A 703 SER A 705 0 SHEET 2 D 2 THR A 727 PRO A 729 -1 O ILE A 728 N TYR A 704 SHEET 1 E 2 THR A 709 ILE A 712 0 SHEET 2 E 2 GLY A 715 HIS A 718 -1 O GLY A 715 N ILE A 712 SHEET 1 F 2 VAL A 826 MSE A 828 0 SHEET 2 F 2 SER A 851 GLN A 854 -1 O GLY A 853 N VAL A 827 SHEET 1 G 6 TYR B 550 ASN B 553 0 SHEET 2 G 6 THR B 538 LYS B 544 -1 N GLU B 541 O ASN B 553 SHEET 3 G 6 ILE B 531 ILE B 532 -1 N ILE B 531 O LEU B 539 SHEET 4 G 6 SER B 609 LEU B 612 1 O LEU B 612 N ILE B 532 SHEET 5 G 6 VAL B 833 LEU B 837 -1 O ARG B 835 N VAL B 611 SHEET 6 G 6 VAL B 843 THR B 846 -1 O VAL B 844 N VAL B 836 SHEET 1 H 2 TYR B 566 SER B 568 0 SHEET 2 H 2 GLY B 572 ALA B 574 -1 O GLY B 572 N SER B 568 SHEET 1 I 5 VAL B 643 SER B 649 0 SHEET 2 I 5 SER B 630 MSE B 636 -1 N VAL B 635 O ALA B 645 SHEET 3 I 5 LEU B 916 GLU B 923 -1 O GLU B 923 N SER B 630 SHEET 4 I 5 PHE B 901 ALA B 909 -1 N SER B 903 O ILE B 922 SHEET 5 I 5 ALA B 888 ASP B 895 -1 N GLY B 892 O PHE B 904 SHEET 1 J 2 THR B 703 SER B 705 0 SHEET 2 J 2 THR B 727 PRO B 729 -1 O ILE B 728 N TYR B 704 SHEET 1 K 2 THR B 709 ILE B 712 0 SHEET 2 K 2 GLY B 715 HIS B 718 -1 O GLY B 715 N ILE B 712 SHEET 1 L 2 VAL B 826 MSE B 828 0 SHEET 2 L 2 SER B 851 GLN B 854 -1 O GLY B 853 N VAL B 827 LINK C GLY A 558 N MSE A 559 1555 1555 1.34 LINK C MSE A 559 N ALA A 560 1555 1555 1.33 LINK C SER A 579 N MSE A 580 1555 1555 1.34 LINK C MSE A 580 N ASN A 581 1555 1555 1.32 LINK C SER A 599 N MSE A 600 1555 1555 1.33 LINK C MSE A 600 N ALA A 601 1555 1555 1.33 LINK C GLN A 617 N MSE A 618 1555 1555 1.33 LINK C MSE A 618 N GLN A 619 1555 1555 1.34 LINK C VAL A 635 N MSE A 636 1555 1555 1.33 LINK C MSE A 636 N ASP A 637 1555 1555 1.32 LINK OG SER A 682 C1 DXU A1001 1555 1555 1.41 LINK C THR A 709 N MSE A 710 1555 1555 1.32 LINK C MSE A 710 N GLU A 711 1555 1555 1.31 LINK C ASP A 724 N MSE A 725 1555 1555 1.34 LINK C MSE A 725 N GLY A 726 1555 1555 1.33 LINK C LEU A 777 N MSE A 778 1555 1555 1.34 LINK C MSE A 778 N PRO A 779 1555 1555 1.35 LINK C GLU A 783 N MSE A 784 1555 1555 1.34 LINK C MSE A 784 N THR A 785 1555 1555 1.33 LINK C VAL A 811 N MSE A 812 1555 1555 1.34 LINK C MSE A 812 N GLN A 813 1555 1555 1.34 LINK C VAL A 827 N MSE A 828 1555 1555 1.33 LINK C MSE A 828 N ASN A 829 1555 1555 1.32 LINK C ALA A 867 N MSE A 868 1555 1555 1.34 LINK C MSE A 868 N LEU A 869 1555 1555 1.33 LINK C GLY A 877 N MSE A 878 1555 1555 1.33 LINK C MSE A 878 N GLY A 879 1555 1555 1.33 LINK C GLY B 558 N MSE B 559 1555 1555 1.33 LINK C MSE B 559 N ALA B 560 1555 1555 1.32 LINK C SER B 579 N MSE B 580 1555 1555 1.34 LINK C MSE B 580 N ASN B 581 1555 1555 1.31 LINK C SER B 599 N MSE B 600 1555 1555 1.33 LINK C MSE B 600 N ALA B 601 1555 1555 1.33 LINK C GLN B 617 N MSE B 618 1555 1555 1.34 LINK C MSE B 618 N GLN B 619 1555 1555 1.34 LINK C VAL B 635 N MSE B 636 1555 1555 1.33 LINK C MSE B 636 N ASP B 637 1555 1555 1.32 LINK OG SER B 682 C1 DXU B1001 1555 1555 1.40 LINK C THR B 709 N MSE B 710 1555 1555 1.33 LINK C MSE B 710 N GLU B 711 1555 1555 1.32 LINK C ASP B 724 N MSE B 725 1555 1555 1.32 LINK C MSE B 725 N GLY B 726 1555 1555 1.33 LINK C LEU B 777 N MSE B 778 1555 1555 1.33 LINK C MSE B 778 N PRO B 779 1555 1555 1.35 LINK C GLU B 783 N MSE B 784 1555 1555 1.33 LINK C MSE B 784 N THR B 785 1555 1555 1.32 LINK C VAL B 811 N MSE B 812 1555 1555 1.33 LINK C MSE B 812 N GLN B 813 1555 1555 1.33 LINK C VAL B 827 N MSE B 828 1555 1555 1.34 LINK C MSE B 828 N ASN B 829 1555 1555 1.34 LINK C ALA B 867 N MSE B 868 1555 1555 1.35 LINK C MSE B 868 N LEU B 869 1555 1555 1.33 LINK C GLY B 877 N MSE B 878 1555 1555 1.33 LINK C MSE B 878 N GLY B 879 1555 1555 1.33 CISPEP 1 SER A 649 PRO A 650 0 2.47 CISPEP 2 GLY A 806 PRO A 807 0 4.59 CISPEP 3 ALA A 909 PRO A 910 0 -14.07 CISPEP 4 SER B 649 PRO B 650 0 2.12 CISPEP 5 GLY B 806 PRO B 807 0 0.78 CISPEP 6 ALA B 909 PRO B 910 0 -15.48 SITE 1 AC1 16 GLY A 681 SER A 682 HIS A 718 TYR A 720 SITE 2 AC1 16 SER A 737 ASN A 739 TRP A 791 CYS A 794 SITE 3 AC1 16 LEU A 796 LYS A 890 THR A 891 GLY A 892 SITE 4 AC1 16 THR A 893 ALA A 894 ASP A 895 HOH A1172 SITE 1 AC2 5 THR A 699 ASP A 701 THR A 702 HOH A1144 SITE 2 AC2 5 HOH A1266 SITE 1 AC3 5 SER A 579 GLY A 768 GLN A 769 PHE A 771 SITE 2 AC3 5 HOH A1307 SITE 1 AC4 6 GLN A 627 GLY A 628 TYR A 629 SER A 630 SITE 2 AC4 6 SER A 649 HOH A1206 SITE 1 AC5 1 GLN A 943 SITE 1 AC6 14 GLY B 681 SER B 682 HIS B 718 TYR B 720 SITE 2 AC6 14 SER B 737 ASN B 739 TRP B 791 CYS B 794 SITE 3 AC6 14 THR B 876 THR B 891 GLY B 892 THR B 893 SITE 4 AC6 14 ASP B 895 HOH B1139 SITE 1 AC7 2 GLY B 768 GLN B 769 SITE 1 AC8 3 SER B 756 ALA B 855 HOH B1234 CRYST1 67.611 69.882 114.251 90.00 96.87 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014790 0.000000 0.001782 0.00000 SCALE2 0.000000 0.014310 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008816 0.00000 MTRIX1 1 1.000000 0.000000 0.000000 0.00000 1 MTRIX2 1 0.000000 1.000000 0.000000 0.00000 1 MTRIX3 1 0.000000 0.000000 1.000000 0.00000 1 MTRIX1 2 0.999938 0.001857 0.011000 6.80260 1 MTRIX2 2 0.001726 -0.999928 0.011912 48.33960 1 MTRIX3 2 0.011021 -0.011892 -0.999869 -56.08216 1