HEADER UNKNOWN FUNCTION 12-AUG-14 4R2L TITLE CRYSTAL STRUCTURE OF YNAF (UNIVERSAL STRESS PROTEIN F) FROM SALMONELLA TITLE 2 TYPHIMURIUM COMPND MOL_ID: 1; COMPND 2 MOLECULE: UNIVERSAL STRESS PROTEIN F; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SALMONELLA ENTERICA SUBSP. ENTERICA SEROVAR SOURCE 3 TYPHIMURIUM STR. LT2; SOURCE 4 ORGANISM_TAXID: 99287; SOURCE 5 STRAIN: LT2; SOURCE 6 GENE: STM1652, USPF, YNAF USPF STM1652; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)PLYSS; SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: PRSET C KEYWDS UNIVERSAL STRESS PROTEIN, HUP DOMAIN, STRESS TOLERANCE, ATP BINDING, KEYWDS 2 CHLORIDE BINDING, UNKNOWN FUNCTION EXPDTA X-RAY DIFFRACTION AUTHOR M.BANGERA,M.R.N.MURTHY REVDAT 3 08-NOV-23 4R2L 1 REMARK REVDAT 2 24-AUG-22 4R2L 1 JRNL REMARK SEQADV LINK REVDAT 1 04-FEB-15 4R2L 0 JRNL AUTH M.BANGERA,R.PANIGRAHI,S.R.SAGURTHI,H.S.SAVITHRI,M.R.MURTHY JRNL TITL STRUCTURAL AND FUNCTIONAL ANALYSIS OF TWO UNIVERSAL STRESS JRNL TITL 2 PROTEINS YDAA AND YNAF FROM SALMONELLA TYPHIMURIUM: POSSIBLE JRNL TITL 3 ROLES IN MICROBIAL STRESS TOLERANCE. JRNL REF J.STRUCT.BIOL. V. 189 238 2015 JRNL REFN ESSN 1095-8657 JRNL PMID 25600413 JRNL DOI 10.1016/J.JSB.2015.01.003 REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0049 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 33.19 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 26406 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.191 REMARK 3 R VALUE (WORKING SET) : 0.189 REMARK 3 FREE R VALUE : 0.235 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1397 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.80 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.85 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1897 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.60 REMARK 3 BIN R VALUE (WORKING SET) : 0.2640 REMARK 3 BIN FREE R VALUE SET COUNT : 106 REMARK 3 BIN FREE R VALUE : 0.3090 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2065 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 78 REMARK 3 SOLVENT ATOMS : 200 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 21.90 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 36.98 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.43000 REMARK 3 B22 (A**2) : -0.43000 REMARK 3 B33 (A**2) : 0.86000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.130 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.129 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.099 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 5.265 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.960 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.941 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2215 ; 0.016 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 2145 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3038 ; 1.915 ; 2.020 REMARK 3 BOND ANGLES OTHERS (DEGREES): 4944 ; 0.927 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 289 ; 5.908 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 75 ;29.760 ;24.667 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 362 ;12.619 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 10 ;14.733 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 376 ; 0.101 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2409 ; 0.008 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 423 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1124 ; 1.366 ; 1.553 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1123 ; 1.366 ; 1.553 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1402 ; 2.263 ; 2.317 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 1403 ; 2.263 ; 2.316 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1091 ; 1.730 ; 1.742 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 1091 ; 1.729 ; 1.742 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 1629 ; 2.649 ; 2.554 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 2588 ; 6.834 ;14.285 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 2589 ; 6.833 ;14.294 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 3 A 144 REMARK 3 ORIGIN FOR THE GROUP (A): 19.0780 -39.3320 -6.8260 REMARK 3 T TENSOR REMARK 3 T11: 0.0427 T22: 0.1802 REMARK 3 T33: 0.1902 T12: 0.0555 REMARK 3 T13: -0.0043 T23: -0.0055 REMARK 3 L TENSOR REMARK 3 L11: 6.5505 L22: 3.2828 REMARK 3 L33: 2.3355 L12: -2.2419 REMARK 3 L13: 0.8269 L23: 0.4177 REMARK 3 S TENSOR REMARK 3 S11: 0.0346 S12: -0.2284 S13: 0.3432 REMARK 3 S21: -0.2337 S22: -0.1135 S23: 0.3752 REMARK 3 S31: -0.0825 S32: -0.3717 S33: 0.0789 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 2 B 144 REMARK 3 ORIGIN FOR THE GROUP (A): 38.4990 -58.8000 -11.5150 REMARK 3 T TENSOR REMARK 3 T11: 0.0732 T22: 0.0121 REMARK 3 T33: 0.0596 T12: 0.0132 REMARK 3 T13: -0.0018 T23: 0.0149 REMARK 3 L TENSOR REMARK 3 L11: 3.6036 L22: 5.2995 REMARK 3 L33: 2.8784 L12: -0.1810 REMARK 3 L13: -0.7787 L23: -0.0204 REMARK 3 S TENSOR REMARK 3 S11: 0.1620 S12: 0.0590 S13: -0.2725 REMARK 3 S21: -0.1590 S22: -0.0988 S23: -0.2799 REMARK 3 S31: 0.3074 S32: -0.0518 S33: -0.0632 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 4R2L COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 27-AUG-14. REMARK 100 THE DEPOSITION ID IS D_1000086819. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 23-NOV-11 REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : BM14 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.953720 REMARK 200 MONOCHROMATOR : SI(111) MONOCHROMATOR REMARK 200 OPTICS : BENT COLLIMATING MIRROR AND REMARK 200 TOROID REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 27850 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 33.190 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 10.20 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.07500 REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.90 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 9.50 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.67500 REMARK 200 FOR SHELL : 3.400 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ID 3FH0 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 40.80 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.08 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 30% PEG 4000, 100MM TRIS-HCL PH 8.5, REMARK 280 200MM MAGNESIUM CHLORIDE, 100MM GUANIDINE HYDROCHLORIDE, UNDER REMARK 280 OIL, MICROBATCH, TEMPERATURE 298.0K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 16.35500 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 66.38000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 66.38000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 24.53250 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 66.38000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 66.38000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 8.17750 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 66.38000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 66.38000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 24.53250 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 66.38000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 66.38000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 8.17750 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 16.35500 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 14700 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 22010 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -130.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 -16.35500 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH B 342 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 415 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -13 REMARK 465 ARG A -12 REMARK 465 GLY A -11 REMARK 465 SER A -10 REMARK 465 HIS A -9 REMARK 465 HIS A -8 REMARK 465 HIS A -7 REMARK 465 HIS A -6 REMARK 465 HIS A -5 REMARK 465 HIS A -4 REMARK 465 GLY A -3 REMARK 465 MET A -2 REMARK 465 ALA A -1 REMARK 465 SER A 0 REMARK 465 MET A 1 REMARK 465 TYR A 54 REMARK 465 MET B -13 REMARK 465 ARG B -12 REMARK 465 GLY B -11 REMARK 465 SER B -10 REMARK 465 HIS B -9 REMARK 465 HIS B -8 REMARK 465 HIS B -7 REMARK 465 HIS B -6 REMARK 465 HIS B -5 REMARK 465 HIS B -4 REMARK 465 GLY B -3 REMARK 465 MET B -2 REMARK 465 ALA B -1 REMARK 465 SER B 0 REMARK 465 MET B 1 REMARK 465 LEU B 52 REMARK 465 ALA B 53 REMARK 465 TYR B 54 REMARK 465 SER B 55 REMARK 465 ALA B 56 REMARK 465 GLU B 57 REMARK 465 LEU B 58 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASN A 2 CG OD1 ND2 REMARK 470 SER A 14 OG REMARK 470 GLN A 18 CG CD OE1 NE2 REMARK 470 VAL A 20 CG1 CG2 REMARK 470 LYS A 29 CG CD CE NZ REMARK 470 ASP A 32 CG OD1 OD2 REMARK 470 LYS A 34 CG CD CE NZ REMARK 470 SER A 55 OG REMARK 470 LEU A 58 CG CD1 CD2 REMARK 470 LYS A 65 NZ REMARK 470 ARG A 85 CZ NH1 NH2 REMARK 470 LYS A 104 CE NZ REMARK 470 LYS A 105 CD CE NZ REMARK 470 ASP A 119 CG OD1 OD2 REMARK 470 LYS B 29 CD CE NZ REMARK 470 LYS B 34 CD CE NZ REMARK 470 ASP B 62 CG OD1 OD2 REMARK 470 LYS B 65 CE NZ REMARK 470 LYS B 69 CG CD CE NZ REMARK 470 LYS B 77 CE NZ REMARK 470 ARG B 85 CZ NH1 NH2 REMARK 470 LYS B 104 NZ REMARK 470 LYS B 105 CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 31 35.21 -153.47 REMARK 500 ASP B 31 26.97 -141.20 REMARK 500 HIS B 116 164.11 177.35 REMARK 500 ASP B 119 -169.16 -160.68 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 201 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ATP A 202 O1B REMARK 620 2 ATP A 202 O3G 88.3 REMARK 620 3 ATP A 202 O2A 88.5 88.8 REMARK 620 4 HOH A 301 O 83.9 171.9 92.9 REMARK 620 5 HOH A 304 O 168.5 103.1 90.5 84.7 REMARK 620 6 HOH A 306 O 88.0 91.4 176.5 86.4 92.8 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 201 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ATP B 202 O1B REMARK 620 2 ATP B 202 O2A 91.8 REMARK 620 3 ATP B 202 O2G 81.8 88.5 REMARK 620 4 HOH B 301 O 89.6 93.7 171.2 REMARK 620 5 HOH B 303 O 89.5 178.6 91.2 86.8 REMARK 620 6 HOH B 306 O 177.6 90.6 98.2 90.3 88.1 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ATP A 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 204 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 205 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 206 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG B 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ATP B 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 203 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4R2J RELATED DB: PDB REMARK 900 RELATED ID: 4R2K RELATED DB: PDB REMARK 900 RELATED ID: 4R2M RELATED DB: PDB DBREF 4R2L A 1 144 UNP P67091 USPF_SALTY 1 144 DBREF 4R2L B 1 144 UNP P67091 USPF_SALTY 1 144 SEQADV 4R2L MET A -13 UNP P67091 EXPRESSION TAG SEQADV 4R2L ARG A -12 UNP P67091 EXPRESSION TAG SEQADV 4R2L GLY A -11 UNP P67091 EXPRESSION TAG SEQADV 4R2L SER A -10 UNP P67091 EXPRESSION TAG SEQADV 4R2L HIS A -9 UNP P67091 EXPRESSION TAG SEQADV 4R2L HIS A -8 UNP P67091 EXPRESSION TAG SEQADV 4R2L HIS A -7 UNP P67091 EXPRESSION TAG SEQADV 4R2L HIS A -6 UNP P67091 EXPRESSION TAG SEQADV 4R2L HIS A -5 UNP P67091 EXPRESSION TAG SEQADV 4R2L HIS A -4 UNP P67091 EXPRESSION TAG SEQADV 4R2L GLY A -3 UNP P67091 EXPRESSION TAG SEQADV 4R2L MET A -2 UNP P67091 EXPRESSION TAG SEQADV 4R2L ALA A -1 UNP P67091 EXPRESSION TAG SEQADV 4R2L SER A 0 UNP P67091 EXPRESSION TAG SEQADV 4R2L MET B -13 UNP P67091 EXPRESSION TAG SEQADV 4R2L ARG B -12 UNP P67091 EXPRESSION TAG SEQADV 4R2L GLY B -11 UNP P67091 EXPRESSION TAG SEQADV 4R2L SER B -10 UNP P67091 EXPRESSION TAG SEQADV 4R2L HIS B -9 UNP P67091 EXPRESSION TAG SEQADV 4R2L HIS B -8 UNP P67091 EXPRESSION TAG SEQADV 4R2L HIS B -7 UNP P67091 EXPRESSION TAG SEQADV 4R2L HIS B -6 UNP P67091 EXPRESSION TAG SEQADV 4R2L HIS B -5 UNP P67091 EXPRESSION TAG SEQADV 4R2L HIS B -4 UNP P67091 EXPRESSION TAG SEQADV 4R2L GLY B -3 UNP P67091 EXPRESSION TAG SEQADV 4R2L MET B -2 UNP P67091 EXPRESSION TAG SEQADV 4R2L ALA B -1 UNP P67091 EXPRESSION TAG SEQADV 4R2L SER B 0 UNP P67091 EXPRESSION TAG SEQRES 1 A 158 MET ARG GLY SER HIS HIS HIS HIS HIS HIS GLY MET ALA SEQRES 2 A 158 SER MET ASN ARG THR ILE LEU VAL PRO ILE ASP ILE SER SEQRES 3 A 158 ASP SER GLU LEU THR GLN ARG VAL ILE SER HIS VAL GLU SEQRES 4 A 158 ALA GLU ALA LYS ILE ASP ASP ALA LYS VAL HIS PHE LEU SEQRES 5 A 158 THR VAL ILE PRO SER LEU PRO TYR TYR ALA SER LEU GLY SEQRES 6 A 158 LEU ALA TYR SER ALA GLU LEU PRO ALA MET ASP ASP LEU SEQRES 7 A 158 LYS ALA GLU ALA LYS SER GLN LEU GLU ALA ILE ILE LYS SEQRES 8 A 158 LYS PHE ASN LEU PRO ALA ASP ARG VAL GLN ALA HIS VAL SEQRES 9 A 158 ALA GLU GLY SER PRO LYS ASP LYS ILE LEU GLU MET ALA SEQRES 10 A 158 LYS LYS LEU PRO ALA ASP MET VAL ILE ILE ALA SER HIS SEQRES 11 A 158 ARG PRO ASP ILE THR THR TYR LEU LEU GLY SER ASN ALA SEQRES 12 A 158 ALA ALA VAL VAL ARG HIS ALA GLU CYS SER VAL LEU VAL SEQRES 13 A 158 VAL ARG SEQRES 1 B 158 MET ARG GLY SER HIS HIS HIS HIS HIS HIS GLY MET ALA SEQRES 2 B 158 SER MET ASN ARG THR ILE LEU VAL PRO ILE ASP ILE SER SEQRES 3 B 158 ASP SER GLU LEU THR GLN ARG VAL ILE SER HIS VAL GLU SEQRES 4 B 158 ALA GLU ALA LYS ILE ASP ASP ALA LYS VAL HIS PHE LEU SEQRES 5 B 158 THR VAL ILE PRO SER LEU PRO TYR TYR ALA SER LEU GLY SEQRES 6 B 158 LEU ALA TYR SER ALA GLU LEU PRO ALA MET ASP ASP LEU SEQRES 7 B 158 LYS ALA GLU ALA LYS SER GLN LEU GLU ALA ILE ILE LYS SEQRES 8 B 158 LYS PHE ASN LEU PRO ALA ASP ARG VAL GLN ALA HIS VAL SEQRES 9 B 158 ALA GLU GLY SER PRO LYS ASP LYS ILE LEU GLU MET ALA SEQRES 10 B 158 LYS LYS LEU PRO ALA ASP MET VAL ILE ILE ALA SER HIS SEQRES 11 B 158 ARG PRO ASP ILE THR THR TYR LEU LEU GLY SER ASN ALA SEQRES 12 B 158 ALA ALA VAL VAL ARG HIS ALA GLU CYS SER VAL LEU VAL SEQRES 13 B 158 VAL ARG HET MG A 201 1 HET ATP A 202 31 HET CL A 203 1 HET CL A 204 1 HET EDO A 205 4 HET EDO A 206 4 HET MG B 201 1 HET ATP B 202 31 HET EDO B 203 4 HETNAM MG MAGNESIUM ION HETNAM ATP ADENOSINE-5'-TRIPHOSPHATE HETNAM CL CHLORIDE ION HETNAM EDO 1,2-ETHANEDIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 3 MG 2(MG 2+) FORMUL 4 ATP 2(C10 H16 N5 O13 P3) FORMUL 5 CL 2(CL 1-) FORMUL 7 EDO 3(C2 H6 O2) FORMUL 12 HOH *200(H2 O) HELIX 1 1 ASP A 13 ARG A 19 1 7 HELIX 2 2 VAL A 20 ASP A 31 1 12 HELIX 3 3 LEU A 44 LEU A 50 1 7 HELIX 4 4 ALA A 60 LYS A 77 1 18 HELIX 5 5 PRO A 82 ASP A 84 5 3 HELIX 6 6 SER A 94 LEU A 106 1 13 HELIX 7 7 GLY A 126 ALA A 136 1 11 HELIX 8 8 ASP B 13 VAL B 20 1 8 HELIX 9 9 VAL B 20 ASP B 32 1 13 HELIX 10 10 LEU B 44 GLY B 51 1 8 HELIX 11 11 ALA B 60 LYS B 77 1 18 HELIX 12 12 PRO B 82 ASP B 84 5 3 HELIX 13 13 SER B 94 LEU B 106 1 13 HELIX 14 14 GLY B 126 ALA B 136 1 11 SHEET 1 A10 VAL A 86 GLU A 92 0 SHEET 2 A10 LYS A 34 ILE A 41 1 N PHE A 37 O GLN A 87 SHEET 3 A10 THR A 4 PRO A 8 1 N ILE A 5 O HIS A 36 SHEET 4 A10 MET A 110 ALA A 114 1 O ILE A 112 N LEU A 6 SHEET 5 A10 SER A 139 VAL A 143 1 O VAL A 143 N ILE A 113 SHEET 6 A10 SER B 139 VAL B 143 -1 O VAL B 140 N VAL A 142 SHEET 7 A10 MET B 110 ALA B 114 1 N ILE B 113 O VAL B 143 SHEET 8 A10 THR B 4 PRO B 8 1 N LEU B 6 O MET B 110 SHEET 9 A10 LYS B 34 ILE B 41 1 O HIS B 36 N ILE B 5 SHEET 10 A10 VAL B 86 GLU B 92 1 O GLN B 87 N PHE B 37 SHEET 1 B 2 LEU A 52 ALA A 53 0 SHEET 2 B 2 ALA A 56 GLU A 57 1 O ALA A 56 N ALA A 53 LINK MG MG A 201 O1B ATP A 202 1555 1555 2.08 LINK MG MG A 201 O3G ATP A 202 1555 1555 2.10 LINK MG MG A 201 O2A ATP A 202 1555 1555 2.17 LINK MG MG A 201 O HOH A 301 1555 1555 2.02 LINK MG MG A 201 O HOH A 304 1555 1555 1.94 LINK MG MG A 201 O HOH A 306 1555 1555 2.08 LINK MG MG B 201 O1B ATP B 202 1555 1555 1.99 LINK MG MG B 201 O2A ATP B 202 1555 1555 1.99 LINK MG MG B 201 O2G ATP B 202 1555 1555 2.14 LINK MG MG B 201 O HOH B 301 1555 1555 2.11 LINK MG MG B 201 O HOH B 303 1555 1555 2.26 LINK MG MG B 201 O HOH B 306 1555 1555 2.09 CISPEP 1 LEU A 106 PRO A 107 0 -9.23 CISPEP 2 LEU B 106 PRO B 107 0 -15.71 SITE 1 AC1 4 ATP A 202 HOH A 301 HOH A 304 HOH A 306 SITE 1 AC2 25 PRO A 8 ILE A 9 ASP A 10 LEU A 16 SITE 2 AC2 25 LEU A 38 VAL A 40 TYR A 46 PRO A 95 SITE 3 AC2 25 LYS A 96 ILE A 113 ALA A 114 HIS A 116 SITE 4 AC2 25 ARG A 117 GLY A 126 SER A 127 ASN A 128 SITE 5 AC2 25 ALA A 129 MG A 201 EDO A 206 HOH A 301 SITE 6 AC2 25 HOH A 304 HOH A 305 HOH A 306 HOH A 324 SITE 7 AC2 25 HOH A 374 SITE 1 AC3 3 ARG A 134 LEU B 124 HIS B 135 SITE 1 AC4 4 LEU A 124 HIS A 135 HOH A 338 ARG B 134 SITE 1 AC5 8 LEU A 100 ALA A 103 LYS A 104 ALA A 136 SITE 2 AC5 8 GLU A 137 CYS A 138 HOH A 323 HOH A 326 SITE 1 AC6 6 LYS A 96 ILE A 120 TYR A 123 ATP A 202 SITE 2 AC6 6 HOH A 311 HOH A 314 SITE 1 AC7 4 ATP B 202 HOH B 301 HOH B 303 HOH B 306 SITE 1 AC8 24 PRO B 8 ILE B 9 LEU B 16 LEU B 38 SITE 2 AC8 24 VAL B 40 TYR B 46 PRO B 95 LYS B 96 SITE 3 AC8 24 ILE B 113 ALA B 114 HIS B 116 ARG B 117 SITE 4 AC8 24 GLY B 126 SER B 127 ASN B 128 ALA B 129 SITE 5 AC8 24 MG B 201 HOH B 301 HOH B 303 HOH B 304 SITE 6 AC8 24 HOH B 306 HOH B 314 HOH B 335 HOH B 353 SITE 1 AC9 9 ARG A 134 HOH A 307 ALA B 130 ALA B 131 SITE 2 AC9 9 ARG B 134 HOH B 322 HOH B 339 HOH B 342 SITE 3 AC9 9 HOH B 409 CRYST1 132.760 132.760 32.710 90.00 90.00 90.00 P 43 21 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007532 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007532 0.000000 0.00000 SCALE3 0.000000 0.000000 0.030572 0.00000