HEADER UNKNOWN FUNCTION 12-AUG-14 4R2M TITLE CRYSTAL STRUCTURE OF R134D MUTANT OF YNAF (UNIVERSAL STRESS PROTEIN F) TITLE 2 FROM SALMONELLA TYPHIMURIUM COMPND MOL_ID: 1; COMPND 2 MOLECULE: UNIVERSAL STRESS PROTEIN F; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES; COMPND 5 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SALMONELLA ENTERICA SUBSP. ENTERICA SEROVAR SOURCE 3 TYPHIMURIUM STR. LT2; SOURCE 4 ORGANISM_TAXID: 99287; SOURCE 5 STRAIN: LT2; SOURCE 6 GENE: STM1652, USPF, YNAF USPF STM1652; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)PLYSS; SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: PRSET C KEYWDS UNIVERSAL STRESS PROTEIN, HUP DOMAIN, STRESS TOLERANCE, ATP BINDING, KEYWDS 2 CHLORIDE BINDING, UNKNOWN FUNCTION EXPDTA X-RAY DIFFRACTION AUTHOR M.BANGERA,M.R.N.MURTHY REVDAT 3 08-NOV-23 4R2M 1 REMARK REVDAT 2 24-AUG-22 4R2M 1 JRNL REMARK SEQADV LINK REVDAT 1 04-FEB-15 4R2M 0 JRNL AUTH M.BANGERA,R.PANIGRAHI,S.R.SAGURTHI,H.S.SAVITHRI,M.R.MURTHY JRNL TITL STRUCTURAL AND FUNCTIONAL ANALYSIS OF TWO UNIVERSAL STRESS JRNL TITL 2 PROTEINS YDAA AND YNAF FROM SALMONELLA TYPHIMURIUM: POSSIBLE JRNL TITL 3 ROLES IN MICROBIAL STRESS TOLERANCE. JRNL REF J.STRUCT.BIOL. V. 189 238 2015 JRNL REFN ESSN 1095-8657 JRNL PMID 25600413 JRNL DOI 10.1016/J.JSB.2015.01.003 REMARK 2 REMARK 2 RESOLUTION. 2.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0049 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 41.48 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 14470 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.197 REMARK 3 R VALUE (WORKING SET) : 0.195 REMARK 3 FREE R VALUE : 0.234 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 765 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.20 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.26 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1043 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.2260 REMARK 3 BIN FREE R VALUE SET COUNT : 53 REMARK 3 BIN FREE R VALUE : 0.2780 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2074 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 64 REMARK 3 SOLVENT ATOMS : 80 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 32.00 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 41.25 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.29000 REMARK 3 B22 (A**2) : -0.29000 REMARK 3 B33 (A**2) : 0.59000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.288 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.209 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.158 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 11.425 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.950 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.927 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2257 ; 0.011 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 2125 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3111 ; 1.814 ; 2.049 REMARK 3 BOND ANGLES OTHERS (DEGREES): 4888 ; 0.806 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 285 ; 6.245 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 69 ;33.333 ;24.783 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 344 ;13.272 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 7 ; 8.720 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 381 ; 0.079 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2426 ; 0.006 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 433 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1134 ; 1.412 ; 2.341 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1134 ; 1.411 ; 2.341 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1415 ; 2.276 ; 3.509 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 1416 ; 2.276 ; 3.508 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1121 ; 1.701 ; 2.526 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 1122 ; 1.701 ; 2.525 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 1695 ; 2.617 ; 3.740 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 2526 ; 5.629 ;20.006 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 2499 ; 5.555 ;19.805 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 2 A 144 REMARK 3 ORIGIN FOR THE GROUP (A): -26.9270 -7.4180 3.2110 REMARK 3 T TENSOR REMARK 3 T11: 0.0716 T22: 0.0088 REMARK 3 T33: 0.0908 T12: -0.0055 REMARK 3 T13: -0.0058 T23: 0.0037 REMARK 3 L TENSOR REMARK 3 L11: 4.2341 L22: 4.6464 REMARK 3 L33: 3.0189 L12: 0.0883 REMARK 3 L13: 0.7064 L23: 0.2598 REMARK 3 S TENSOR REMARK 3 S11: 0.0167 S12: 0.0621 S13: 0.4498 REMARK 3 S21: -0.0231 S22: -0.0158 S23: -0.2516 REMARK 3 S31: -0.1855 S32: 0.1576 S33: -0.0009 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 3 B 144 REMARK 3 ORIGIN FOR THE GROUP (A): -47.0860 -27.2990 -1.8030 REMARK 3 T TENSOR REMARK 3 T11: 0.0231 T22: 0.0751 REMARK 3 T33: 0.1400 T12: 0.0019 REMARK 3 T13: -0.0013 T23: 0.0050 REMARK 3 L TENSOR REMARK 3 L11: 4.7462 L22: 4.9678 REMARK 3 L33: 1.6903 L12: 1.0478 REMARK 3 L13: 0.1733 L23: 0.3816 REMARK 3 S TENSOR REMARK 3 S11: 0.0263 S12: -0.0944 S13: -0.0621 REMARK 3 S21: 0.0308 S22: -0.0158 S23: 0.6349 REMARK 3 S31: 0.0399 S32: -0.2097 S33: -0.0105 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 4R2M COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 27-AUG-14. REMARK 100 THE DEPOSITION ID IS D_1000086820. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 20-FEB-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : BM14 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.978565 REMARK 200 MONOCHROMATOR : SI(111) MONOCHROMATOR REMARK 200 OPTICS : BENT COLLIMATING MIRROR AND REMARK 200 TOROID REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 15273 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.200 REMARK 200 RESOLUTION RANGE LOW (A) : 41.480 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 9.700 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.12000 REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.32 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 9.90 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.67600 REMARK 200 FOR SHELL : 3.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ID 4R2L REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 40.04 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.05 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 30% PEG 4000, 100MM TRIS-HCL PH 8.5, REMARK 280 200MM MAGNESIUM CHLORIDE, 5MM ADENOSINE 5'-(BETA,GAMMA-IMIDO) REMARK 280 TRIPHOSPHATE, UNDER OIL, MICROBATCH, TEMPERATURE 298.0K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 16.50000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 65.59000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 65.59000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 24.75000 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 65.59000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 65.59000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 8.25000 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 65.59000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 65.59000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 24.75000 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 65.59000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 65.59000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 8.25000 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 16.50000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 12760 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 22510 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -84.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -13 REMARK 465 ARG A -12 REMARK 465 GLY A -11 REMARK 465 SER A -10 REMARK 465 HIS A -9 REMARK 465 HIS A -8 REMARK 465 HIS A -7 REMARK 465 HIS A -6 REMARK 465 HIS A -5 REMARK 465 HIS A -4 REMARK 465 GLY A -3 REMARK 465 MET A -2 REMARK 465 ALA A -1 REMARK 465 SER A 0 REMARK 465 MET A 1 REMARK 465 TYR A 54 REMARK 465 MET B -13 REMARK 465 ARG B -12 REMARK 465 GLY B -11 REMARK 465 SER B -10 REMARK 465 HIS B -9 REMARK 465 HIS B -8 REMARK 465 HIS B -7 REMARK 465 HIS B -6 REMARK 465 HIS B -5 REMARK 465 HIS B -4 REMARK 465 GLY B -3 REMARK 465 MET B -2 REMARK 465 ALA B -1 REMARK 465 SER B 0 REMARK 465 MET B 1 REMARK 465 ASN B 2 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASN A 2 CG OD1 ND2 REMARK 470 GLU A 15 CG CD OE1 OE2 REMARK 470 LYS A 29 CG CD CE NZ REMARK 470 ASP A 31 CG OD1 OD2 REMARK 470 LEU A 44 CG CD1 CD2 REMARK 470 LEU A 52 CG CD1 CD2 REMARK 470 SER A 55 OG REMARK 470 GLU A 57 CG CD OE1 OE2 REMARK 470 LEU A 58 CG CD1 CD2 REMARK 470 ASP A 62 CG OD1 OD2 REMARK 470 ASP A 63 CG OD1 OD2 REMARK 470 GLU A 73 CD OE1 OE2 REMARK 470 ARG A 85 CZ NH1 NH2 REMARK 470 LYS A 104 CD CE NZ REMARK 470 LYS A 105 CD CE NZ REMARK 470 ARG A 144 O REMARK 470 SER B 14 OG REMARK 470 GLU B 15 CG CD OE1 OE2 REMARK 470 GLN B 18 CG CD OE1 NE2 REMARK 470 ARG B 19 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 29 CG CD CE NZ REMARK 470 ILE B 30 CG1 CG2 CD1 REMARK 470 ASP B 32 CG OD1 OD2 REMARK 470 LYS B 34 CG CD CE NZ REMARK 470 LEU B 44 CG CD1 CD2 REMARK 470 ARG B 85 CZ NH1 NH2 REMARK 470 LYS B 104 CD CE NZ REMARK 470 LYS B 105 NZ REMARK 470 GLU B 137 CD OE1 OE2 REMARK 470 ARG B 144 O REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O SER A 55 O SER A 55 8555 2.03 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 31 -2.69 83.47 REMARK 500 ALA A 56 -105.59 -145.34 REMARK 500 HIS A 116 144.80 176.64 REMARK 500 THR A 122 42.43 -98.51 REMARK 500 TYR A 123 161.73 -46.56 REMARK 500 LEU A 124 -77.41 -110.96 REMARK 500 ASP B 13 68.75 -118.03 REMARK 500 ASP B 32 49.98 -99.45 REMARK 500 ALA B 56 -86.18 -141.67 REMARK 500 HIS B 116 150.36 176.33 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 201 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ANP A 202 O1A REMARK 620 2 ANP A 202 O1A 94.6 REMARK 620 3 ANP A 202 O1B 6.0 99.1 REMARK 620 4 HOH A 301 O 93.1 99.3 88.4 REMARK 620 5 HOH A 302 O 92.0 88.3 96.1 170.4 REMARK 620 6 HOH A 304 O 88.8 173.0 84.7 86.5 85.4 REMARK 620 7 HOH A 306 O 173.5 88.6 167.6 80.7 93.8 88.7 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 201 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ANP B 202 O1A REMARK 620 2 ANP B 202 O1B 11.1 REMARK 620 3 ANP B 202 O1A 85.3 96.1 REMARK 620 4 HOH B 301 O 91.9 90.2 85.1 REMARK 620 5 HOH B 302 O 97.2 86.3 175.0 90.5 REMARK 620 6 HOH B 304 O 90.7 91.9 97.2 176.7 87.1 REMARK 620 7 HOH B 322 O 172.4 170.3 92.4 95.2 85.6 82.4 REMARK 620 N 1 2 3 4 5 6 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ANP A 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG B 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ANP B 202 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4R2J RELATED DB: PDB REMARK 900 RELATED ID: 4R2K RELATED DB: PDB REMARK 900 RELATED ID: 4R2L RELATED DB: PDB DBREF 4R2M A 1 144 UNP P67091 USPF_SALTY 1 144 DBREF 4R2M B 1 144 UNP P67091 USPF_SALTY 1 144 SEQADV 4R2M MET A -13 UNP P67091 EXPRESSION TAG SEQADV 4R2M ARG A -12 UNP P67091 EXPRESSION TAG SEQADV 4R2M GLY A -11 UNP P67091 EXPRESSION TAG SEQADV 4R2M SER A -10 UNP P67091 EXPRESSION TAG SEQADV 4R2M HIS A -9 UNP P67091 EXPRESSION TAG SEQADV 4R2M HIS A -8 UNP P67091 EXPRESSION TAG SEQADV 4R2M HIS A -7 UNP P67091 EXPRESSION TAG SEQADV 4R2M HIS A -6 UNP P67091 EXPRESSION TAG SEQADV 4R2M HIS A -5 UNP P67091 EXPRESSION TAG SEQADV 4R2M HIS A -4 UNP P67091 EXPRESSION TAG SEQADV 4R2M GLY A -3 UNP P67091 EXPRESSION TAG SEQADV 4R2M MET A -2 UNP P67091 EXPRESSION TAG SEQADV 4R2M ALA A -1 UNP P67091 EXPRESSION TAG SEQADV 4R2M SER A 0 UNP P67091 EXPRESSION TAG SEQADV 4R2M ASP A 134 UNP P67091 ARG 134 ENGINEERED MUTATION SEQADV 4R2M MET B -13 UNP P67091 EXPRESSION TAG SEQADV 4R2M ARG B -12 UNP P67091 EXPRESSION TAG SEQADV 4R2M GLY B -11 UNP P67091 EXPRESSION TAG SEQADV 4R2M SER B -10 UNP P67091 EXPRESSION TAG SEQADV 4R2M HIS B -9 UNP P67091 EXPRESSION TAG SEQADV 4R2M HIS B -8 UNP P67091 EXPRESSION TAG SEQADV 4R2M HIS B -7 UNP P67091 EXPRESSION TAG SEQADV 4R2M HIS B -6 UNP P67091 EXPRESSION TAG SEQADV 4R2M HIS B -5 UNP P67091 EXPRESSION TAG SEQADV 4R2M HIS B -4 UNP P67091 EXPRESSION TAG SEQADV 4R2M GLY B -3 UNP P67091 EXPRESSION TAG SEQADV 4R2M MET B -2 UNP P67091 EXPRESSION TAG SEQADV 4R2M ALA B -1 UNP P67091 EXPRESSION TAG SEQADV 4R2M SER B 0 UNP P67091 EXPRESSION TAG SEQADV 4R2M ASP B 134 UNP P67091 ARG 134 ENGINEERED MUTATION SEQRES 1 A 158 MET ARG GLY SER HIS HIS HIS HIS HIS HIS GLY MET ALA SEQRES 2 A 158 SER MET ASN ARG THR ILE LEU VAL PRO ILE ASP ILE SER SEQRES 3 A 158 ASP SER GLU LEU THR GLN ARG VAL ILE SER HIS VAL GLU SEQRES 4 A 158 ALA GLU ALA LYS ILE ASP ASP ALA LYS VAL HIS PHE LEU SEQRES 5 A 158 THR VAL ILE PRO SER LEU PRO TYR TYR ALA SER LEU GLY SEQRES 6 A 158 LEU ALA TYR SER ALA GLU LEU PRO ALA MET ASP ASP LEU SEQRES 7 A 158 LYS ALA GLU ALA LYS SER GLN LEU GLU ALA ILE ILE LYS SEQRES 8 A 158 LYS PHE ASN LEU PRO ALA ASP ARG VAL GLN ALA HIS VAL SEQRES 9 A 158 ALA GLU GLY SER PRO LYS ASP LYS ILE LEU GLU MET ALA SEQRES 10 A 158 LYS LYS LEU PRO ALA ASP MET VAL ILE ILE ALA SER HIS SEQRES 11 A 158 ARG PRO ASP ILE THR THR TYR LEU LEU GLY SER ASN ALA SEQRES 12 A 158 ALA ALA VAL VAL ASP HIS ALA GLU CYS SER VAL LEU VAL SEQRES 13 A 158 VAL ARG SEQRES 1 B 158 MET ARG GLY SER HIS HIS HIS HIS HIS HIS GLY MET ALA SEQRES 2 B 158 SER MET ASN ARG THR ILE LEU VAL PRO ILE ASP ILE SER SEQRES 3 B 158 ASP SER GLU LEU THR GLN ARG VAL ILE SER HIS VAL GLU SEQRES 4 B 158 ALA GLU ALA LYS ILE ASP ASP ALA LYS VAL HIS PHE LEU SEQRES 5 B 158 THR VAL ILE PRO SER LEU PRO TYR TYR ALA SER LEU GLY SEQRES 6 B 158 LEU ALA TYR SER ALA GLU LEU PRO ALA MET ASP ASP LEU SEQRES 7 B 158 LYS ALA GLU ALA LYS SER GLN LEU GLU ALA ILE ILE LYS SEQRES 8 B 158 LYS PHE ASN LEU PRO ALA ASP ARG VAL GLN ALA HIS VAL SEQRES 9 B 158 ALA GLU GLY SER PRO LYS ASP LYS ILE LEU GLU MET ALA SEQRES 10 B 158 LYS LYS LEU PRO ALA ASP MET VAL ILE ILE ALA SER HIS SEQRES 11 B 158 ARG PRO ASP ILE THR THR TYR LEU LEU GLY SER ASN ALA SEQRES 12 B 158 ALA ALA VAL VAL ASP HIS ALA GLU CYS SER VAL LEU VAL SEQRES 13 B 158 VAL ARG HET MG A 201 1 HET ANP A 202 62 HET MG B 201 1 HET ANP B 202 62 HETNAM MG MAGNESIUM ION HETNAM ANP PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER FORMUL 3 MG 2(MG 2+) FORMUL 4 ANP 2(C10 H17 N6 O12 P3) FORMUL 7 HOH *80(H2 O) HELIX 1 1 SER A 14 ILE A 30 1 17 HELIX 2 2 LEU A 44 LEU A 50 1 7 HELIX 3 3 ALA A 60 LYS A 77 1 18 HELIX 4 4 PRO A 82 ASP A 84 5 3 HELIX 5 5 SER A 94 LEU A 106 1 13 HELIX 6 6 GLY A 126 ALA A 136 1 11 HELIX 7 7 THR B 17 ASP B 31 1 15 HELIX 8 8 LEU B 44 LEU B 50 1 7 HELIX 9 9 ALA B 60 LYS B 77 1 18 HELIX 10 10 PRO B 82 ASP B 84 5 3 HELIX 11 11 SER B 94 LEU B 106 1 13 HELIX 12 12 GLY B 126 ALA B 136 1 11 SHEET 1 A10 VAL A 86 GLY A 93 0 SHEET 2 A10 LYS A 34 PRO A 42 1 N PHE A 37 O GLN A 87 SHEET 3 A10 THR A 4 PRO A 8 1 N ILE A 5 O HIS A 36 SHEET 4 A10 MET A 110 ALA A 114 1 O MET A 110 N LEU A 6 SHEET 5 A10 SER A 139 VAL A 143 1 O LEU A 141 N VAL A 111 SHEET 6 A10 SER B 139 VAL B 143 -1 O VAL B 142 N VAL A 140 SHEET 7 A10 MET B 110 ALA B 114 1 N ILE B 113 O LEU B 141 SHEET 8 A10 THR B 4 PRO B 8 1 N LEU B 6 O MET B 110 SHEET 9 A10 LYS B 34 PRO B 42 1 O HIS B 36 N ILE B 5 SHEET 10 A10 VAL B 86 GLY B 93 1 O ALA B 91 N ILE B 41 LINK MG MG A 201 O1AAANP A 202 1555 1555 1.91 LINK MG MG A 201 O1ABANP A 202 1555 1555 1.96 LINK MG MG A 201 O1BBANP A 202 1555 1555 2.02 LINK MG MG A 201 O HOH A 301 1555 1555 2.08 LINK MG MG A 201 O HOH A 302 1555 1555 2.08 LINK MG MG A 201 O HOH A 304 1555 1555 2.12 LINK MG MG A 201 O HOH A 306 1555 1555 1.99 LINK MG MG B 201 O1AAANP B 202 1555 1555 1.84 LINK MG MG B 201 O1BBANP B 202 1555 1555 1.93 LINK MG MG B 201 O1ABANP B 202 1555 1555 1.96 LINK MG MG B 201 O HOH B 301 1555 1555 2.13 LINK MG MG B 201 O HOH B 302 1555 1555 2.18 LINK MG MG B 201 O HOH B 304 1555 1555 2.04 LINK MG MG B 201 O HOH B 322 1555 1555 2.09 CISPEP 1 LEU A 106 PRO A 107 0 -8.75 CISPEP 2 LEU B 106 PRO B 107 0 -7.56 SITE 1 AC1 6 ARG A 117 ANP A 202 HOH A 301 HOH A 302 SITE 2 AC1 6 HOH A 304 HOH A 306 SITE 1 AC2 29 PRO A 8 ILE A 9 ASP A 10 LEU A 16 SITE 2 AC2 29 LEU A 38 VAL A 40 TYR A 46 SER A 94 SITE 3 AC2 29 PRO A 95 LYS A 96 ASP A 97 ILE A 113 SITE 4 AC2 29 ALA A 114 HIS A 116 ARG A 117 TYR A 123 SITE 5 AC2 29 GLY A 126 SER A 127 ASN A 128 ALA A 129 SITE 6 AC2 29 MG A 201 HOH A 301 HOH A 302 HOH A 303 SITE 7 AC2 29 HOH A 304 HOH A 306 HOH A 307 HOH A 323 SITE 8 AC2 29 HOH A 324 SITE 1 AC3 5 ANP B 202 HOH B 301 HOH B 302 HOH B 304 SITE 2 AC3 5 HOH B 322 SITE 1 AC4 27 PRO B 8 ILE B 9 ASP B 10 LEU B 38 SITE 2 AC4 27 VAL B 40 TYR B 46 PRO B 95 LYS B 96 SITE 3 AC4 27 ASP B 97 ILE B 113 ALA B 114 HIS B 116 SITE 4 AC4 27 ARG B 117 GLY B 126 SER B 127 ASN B 128 SITE 5 AC4 27 ALA B 129 MG B 201 HOH B 301 HOH B 302 SITE 6 AC4 27 HOH B 303 HOH B 304 HOH B 308 HOH B 310 SITE 7 AC4 27 HOH B 312 HOH B 322 HOH B 325 CRYST1 131.180 131.180 33.000 90.00 90.00 90.00 P 43 21 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007623 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007623 0.000000 0.00000 SCALE3 0.000000 0.000000 0.030303 0.00000