data_4R2P # _entry.id 4R2P # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.379 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4R2P pdb_00004r2p 10.2210/pdb4r2p/pdb NDB NA3133 ? ? RCSB RCSB086823 ? ? WWPDB D_1000086823 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 4R2A . unspecified PDB 4R2C . unspecified PDB 4R2D . unspecified PDB 4R2E . unspecified PDB 4R2Q . unspecified PDB 4R2R . unspecified PDB 4R2S . unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4R2P _pdbx_database_status.recvd_initial_deposition_date 2014-08-12 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Hashimoto, H.' 1 'Olanrewaju, Y.O.' 2 'Zheng, Y.' 3 'Wilson, G.G.' 4 'Zhang, X.' 5 'Cheng, X.' 6 # _citation.id primary _citation.title 'Wilms tumor protein recognizes 5-carboxylcytosine within a specific DNA sequence.' _citation.journal_abbrev 'Genes Dev.' _citation.journal_volume 28 _citation.page_first 2304 _citation.page_last 2313 _citation.year 2014 _citation.journal_id_ASTM GEDEEP _citation.country US _citation.journal_id_ISSN 0890-9369 _citation.journal_id_CSD 2056 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 25258363 _citation.pdbx_database_id_DOI 10.1101/gad.250746.114 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Hashimoto, H.' 1 ? primary 'Olanrewaju, Y.O.' 2 ? primary 'Zheng, Y.' 3 ? primary 'Wilson, G.G.' 4 ? primary 'Zhang, X.' 5 ? primary 'Cheng, X.' 6 ? # _cell.entry_id 4R2P _cell.length_a 66.852 _cell.length_b 78.591 _cell.length_c 35.718 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4R2P _symmetry.space_group_name_H-M 'P 21 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Wilms tumor protein, isoform 4/CRA_a' 11282.882 1 ? ? 'Zinc Finger 2-4' ? 2 polymer syn ;DNA (5'-D(*AP*GP*CP*GP*TP*GP*GP*GP*(5HC)P*GP*T)-3') ; 3460.259 1 ? ? ? ? 3 polymer syn ;DNA (5'-D(*TP*AP*(5HC)P*GP*CP*CP*CP*AP*CP*GP*C)-3') ; 3309.177 1 ? ? ? ? 4 non-polymer syn 'ZINC ION' 65.409 3 ? ? ? ? 5 non-polymer syn 1,2-ETHANEDIOL 62.068 2 ? ? ? ? 6 water nat water 18.015 143 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name WT33 # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;GPLGSEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFAR SDELVRHHNMHQR ; ;GPLGSEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFAR SDELVRHHNMHQR ; A ? 2 polydeoxyribonucleotide no yes '(DA)(DG)(DC)(DG)(DT)(DG)(DG)(DG)(5HC)(DG)(DT)' AGCGTGGGXGT B ? 3 polydeoxyribonucleotide no yes '(DT)(DA)(5HC)(DG)(DC)(DC)(DC)(DA)(DC)(DG)(DC)' TAXGCCCACGC C ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 PRO n 1 3 LEU n 1 4 GLY n 1 5 SER n 1 6 GLU n 1 7 LYS n 1 8 PRO n 1 9 TYR n 1 10 GLN n 1 11 CYS n 1 12 ASP n 1 13 PHE n 1 14 LYS n 1 15 ASP n 1 16 CYS n 1 17 GLU n 1 18 ARG n 1 19 ARG n 1 20 PHE n 1 21 SER n 1 22 ARG n 1 23 SER n 1 24 ASP n 1 25 GLN n 1 26 LEU n 1 27 LYS n 1 28 ARG n 1 29 HIS n 1 30 GLN n 1 31 ARG n 1 32 ARG n 1 33 HIS n 1 34 THR n 1 35 GLY n 1 36 VAL n 1 37 LYS n 1 38 PRO n 1 39 PHE n 1 40 GLN n 1 41 CYS n 1 42 LYS n 1 43 THR n 1 44 CYS n 1 45 GLN n 1 46 ARG n 1 47 LYS n 1 48 PHE n 1 49 SER n 1 50 ARG n 1 51 SER n 1 52 ASP n 1 53 HIS n 1 54 LEU n 1 55 LYS n 1 56 THR n 1 57 HIS n 1 58 THR n 1 59 ARG n 1 60 THR n 1 61 HIS n 1 62 THR n 1 63 GLY n 1 64 GLU n 1 65 LYS n 1 66 PRO n 1 67 PHE n 1 68 SER n 1 69 CYS n 1 70 ARG n 1 71 TRP n 1 72 PRO n 1 73 SER n 1 74 CYS n 1 75 GLN n 1 76 LYS n 1 77 LYS n 1 78 PHE n 1 79 ALA n 1 80 ARG n 1 81 SER n 1 82 ASP n 1 83 GLU n 1 84 LEU n 1 85 VAL n 1 86 ARG n 1 87 HIS n 1 88 HIS n 1 89 ASN n 1 90 MET n 1 91 HIS n 1 92 GLN n 1 93 ARG n 2 1 DA n 2 2 DG n 2 3 DC n 2 4 DG n 2 5 DT n 2 6 DG n 2 7 DG n 2 8 DG n 2 9 5HC n 2 10 DG n 2 11 DT n 3 1 DT n 3 2 DA n 3 3 5HC n 3 4 DG n 3 5 DC n 3 6 DC n 3 7 DC n 3 8 DA n 3 9 DC n 3 10 DG n 3 11 DC n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene WT1 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3) codon plus' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name 'pGEX6p-1, pXC1295' _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _pdbx_entity_src_syn.entity_id _pdbx_entity_src_syn.pdbx_src_id _pdbx_entity_src_syn.pdbx_alt_source_flag _pdbx_entity_src_syn.pdbx_beg_seq_num _pdbx_entity_src_syn.pdbx_end_seq_num _pdbx_entity_src_syn.organism_scientific _pdbx_entity_src_syn.organism_common_name _pdbx_entity_src_syn.ncbi_taxonomy_id _pdbx_entity_src_syn.details 2 1 sample ? ? 'synthetic construct' ? 32630 'chemical synthesis' 3 1 sample ? ? 'synthetic construct' ? 32630 'chemical synthesis' # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP WT1_HUMAN P19544 1 ;EKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELV RHHNMHQR ; 350 ? 2 PDB 4R2P 4R2P 2 ? ? ? 3 PDB 4R2P 4R2P 3 ? ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 4R2P A 6 ? 93 ? P19544 350 ? 437 ? 350 437 2 2 4R2P B 1 ? 11 ? 4R2P 1 ? 11 ? 1 11 3 3 4R2P C 1 ? 11 ? 4R2P 51 ? 61 ? 51 61 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4R2P GLY A 1 ? UNP P19544 ? ? 'expression tag' 345 1 1 4R2P PRO A 2 ? UNP P19544 ? ? 'expression tag' 346 2 1 4R2P LEU A 3 ? UNP P19544 ? ? 'expression tag' 347 3 1 4R2P GLY A 4 ? UNP P19544 ? ? 'expression tag' 348 4 1 4R2P SER A 5 ? UNP P19544 ? ? 'expression tag' 349 5 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 5HC 'DNA linking' n ;2'-deoxy-5-(hydroxymethyl)cytidine 5'-(dihydrogen phosphate) ; ? 'C10 H16 N3 O8 P' 337.223 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 EDO non-polymer . 1,2-ETHANEDIOL 'ETHYLENE GLYCOL' 'C2 H6 O2' 62.068 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 ZN non-polymer . 'ZINC ION' ? 'Zn 2' 65.409 # _exptl.entry_id 4R2P _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.60 _exptl_crystal.density_percent_sol 52.67 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp 289 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.pdbx_details '20% (w/v) PEG 10000, 0.1 M Hepes-NaOH pH 7.5, VAPOR DIFFUSION, SITTING DROP, temperature 289K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.details ? _diffrn_detector.type 'MARMOSAIC 225 mm CCD' _diffrn_detector.pdbx_collection_date 2013-10-12 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Si (111)' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.0000 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 22-BM' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 22-BM _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.0000 # _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.limit_k_max ? _reflns.d_resolution_high 1.788 _reflns.observed_criterion_F_min ? _reflns.pdbx_netI_over_sigmaI 27.3 _reflns.observed_criterion_F_max ? _reflns.pdbx_Rmerge_I_obs 0.067 _reflns.limit_l_max ? _reflns.limit_k_min ? _reflns.entry_id 4R2P _reflns.B_iso_Wilson_estimate 22.43 _reflns.percent_possible_obs 99.0 _reflns.pdbx_Rsym_value ? _reflns.observed_criterion_sigma_I -3 _reflns.observed_criterion_sigma_F 0 _reflns.limit_l_min ? _reflns.limit_h_min ? _reflns.R_free_details ? _reflns.number_all ? _reflns.d_resolution_low 29.242 _reflns.pdbx_redundancy 8.5 _reflns.number_obs 18227 _reflns.limit_h_max ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 1.79 _reflns_shell.d_res_low 1.85 _reflns_shell.percent_possible_all 92.9 _reflns_shell.Rmerge_I_obs 0.428 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 3.8 _reflns_shell.pdbx_redundancy 6.4 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 1669 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.number_possible ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.meanI_over_sigI_all ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.ls_percent_reflns_R_free 5.01 _refine.overall_SU_B ? _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_R_Free_selection_details RANDOM _refine.overall_FOM_free_R_set ? _refine.pdbx_data_cutoff_low_absF ? _refine.entry_id 4R2P _refine.aniso_B[2][3] ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_ML 0.21 _refine.aniso_B[1][3] ? _refine.pdbx_stereochemistry_target_values ML _refine.aniso_B[3][3] ? _refine.solvent_model_param_ksol ? _refine.ls_number_restraints ? _refine.aniso_B[1][1] ? _refine.pdbx_overall_ESU_R ? _refine.ls_R_factor_obs 0.1804 _refine.occupancy_min ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_starting_model 'PDB ENTRY 4R2E' _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.occupancy_max ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.correlation_coeff_Fo_to_Fc ? _refine.ls_number_reflns_R_free 912 _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_ls_sigma_F 1.35 _refine.ls_percent_reflns_obs 98.84 _refine.ls_R_factor_R_work 0.1788 _refine.overall_SU_R_free ? _refine.ls_d_res_high 1.788 _refine.pdbx_overall_ESU_R_Free ? _refine.B_iso_min ? _refine.pdbx_ls_cross_valid_method ? _refine.B_iso_mean ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.ls_R_factor_all 0.1804 _refine.aniso_B[2][2] ? _refine.B_iso_max ? _refine.pdbx_ls_sigma_I ? _refine.ls_d_res_low 29.242 _refine.pdbx_overall_phase_error 21.99 _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.aniso_B[1][2] ? _refine.ls_R_factor_R_free 0.2097 _refine.ls_R_factor_R_free_error ? _refine.ls_number_reflns_obs 18216 _refine.overall_FOM_work_R_set ? _refine.ls_number_parameters ? _refine.details ? _refine.ls_number_reflns_all 18216 _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.solvent_model_param_bsol ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 753 _refine_hist.pdbx_number_atoms_nucleic_acid 449 _refine_hist.pdbx_number_atoms_ligand 11 _refine_hist.number_atoms_solvent 143 _refine_hist.number_atoms_total 1356 _refine_hist.d_res_high 1.788 _refine_hist.d_res_low 29.242 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id f_bond_d 0.011 ? ? 1430 ? 'X-RAY DIFFRACTION' f_angle_d 1.472 ? ? 2023 ? 'X-RAY DIFFRACTION' f_dihedral_angle_d 22.467 ? ? 581 ? 'X-RAY DIFFRACTION' f_chiral_restr 0.062 ? ? 206 ? 'X-RAY DIFFRACTION' f_plane_restr 0.008 ? ? 166 ? 'X-RAY DIFFRACTION' # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.redundancy_reflns_obs 'X-RAY DIFFRACTION' . 1.7884 1.8826 2303 0.2297 94.00 0.3014 . . 121 . . 1443 . 'X-RAY DIFFRACTION' . 1.8826 2.0006 2416 0.1986 99.00 0.2358 . . 127 . . 2543 . 'X-RAY DIFFRACTION' . 2.0006 2.1550 2458 0.1928 100.00 0.2553 . . 130 . . 2588 . 'X-RAY DIFFRACTION' . 2.1550 2.3718 2492 0.1922 100.00 0.2285 . . 131 . . 2623 . 'X-RAY DIFFRACTION' . 2.3718 2.7148 2496 0.1928 100.00 0.2230 . . 131 . . 2627 . 'X-RAY DIFFRACTION' . 2.7148 3.4195 2495 0.1872 100.00 0.2168 . . 133 . . 2628 . 'X-RAY DIFFRACTION' . 3.4195 29.2455 2644 0.1514 100.00 0.1639 . . 139 . . 2783 . # _struct.entry_id 4R2P _struct.title 'Wilms Tumor Protein (WT1) zinc fingers in complex with hydroxymethylated DNA' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4R2P _struct_keywords.pdbx_keywords 'DNA Binding Protein/DNA' _struct_keywords.text 'Zinc finger, Transcription, DNA Binding Protein-DNA complex' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 4 ? F N N 4 ? G N N 5 ? H N N 5 ? I N N 6 ? J N N 6 ? K N N 6 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ARG A 22 ? GLY A 35 ? ARG A 366 GLY A 379 1 ? 14 HELX_P HELX_P2 2 ARG A 50 ? GLY A 63 ? ARG A 394 GLY A 407 1 ? 14 HELX_P HELX_P3 3 ARG A 80 ? ARG A 93 ? ARG A 424 ARG A 437 1 ? 14 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? B DG 8 "O3'" ? ? ? 1_555 B 5HC 9 P ? ? B DG 8 B 5HC 9 1_555 ? ? ? ? ? ? ? 1.610 ? ? covale2 covale both ? B 5HC 9 "O3'" ? ? ? 1_555 B DG 10 P ? ? B 5HC 9 B DG 10 1_555 ? ? ? ? ? ? ? 1.609 ? ? covale3 covale both ? C DA 2 "O3'" A ? ? 1_555 C 5HC 3 P A ? C DA 52 C 5HC 53 1_555 ? ? ? ? ? ? ? 1.603 ? ? covale4 covale both ? C DA 2 "O3'" B ? ? 1_555 C 5HC 3 P B ? C DA 52 C 5HC 53 1_555 ? ? ? ? ? ? ? 1.605 ? ? covale5 covale both ? C 5HC 3 "O3'" A ? ? 1_555 C DG 4 P A ? C 5HC 53 C DG 54 1_555 ? ? ? ? ? ? ? 1.614 ? ? covale6 covale both ? C 5HC 3 "O3'" B ? ? 1_555 C DG 4 P B ? C 5HC 53 C DG 54 1_555 ? ? ? ? ? ? ? 1.610 ? ? metalc1 metalc ? ? A CYS 11 SG ? ? ? 1_555 D ZN . ZN ? ? A CYS 355 A ZN 501 1_555 ? ? ? ? ? ? ? 2.309 ? ? metalc2 metalc ? ? A CYS 16 SG ? ? ? 1_555 D ZN . ZN ? ? A CYS 360 A ZN 501 1_555 ? ? ? ? ? ? ? 2.248 ? ? metalc3 metalc ? ? A HIS 29 NE2 ? ? ? 1_555 D ZN . ZN ? ? A HIS 373 A ZN 501 1_555 ? ? ? ? ? ? ? 2.065 ? ? metalc4 metalc ? ? A HIS 33 NE2 ? ? ? 1_555 D ZN . ZN ? ? A HIS 377 A ZN 501 1_555 ? ? ? ? ? ? ? 2.032 ? ? metalc5 metalc ? ? A CYS 41 SG ? ? ? 1_555 E ZN . ZN ? ? A CYS 385 A ZN 502 1_555 ? ? ? ? ? ? ? 2.174 ? ? metalc6 metalc ? ? A CYS 44 SG ? ? ? 1_555 E ZN . ZN ? ? A CYS 388 A ZN 502 1_555 ? ? ? ? ? ? ? 2.285 ? ? metalc7 metalc ? ? A HIS 57 NE2 ? ? ? 1_555 E ZN . ZN ? ? A HIS 401 A ZN 502 1_555 ? ? ? ? ? ? ? 2.096 ? ? metalc8 metalc ? ? A HIS 61 NE2 ? ? ? 1_555 E ZN . ZN ? ? A HIS 405 A ZN 502 1_555 ? ? ? ? ? ? ? 2.040 ? ? metalc9 metalc ? ? A CYS 69 SG ? ? ? 1_555 F ZN . ZN ? ? A CYS 413 A ZN 503 1_555 ? ? ? ? ? ? ? 2.246 ? ? metalc10 metalc ? ? A CYS 74 SG ? ? ? 1_555 F ZN . ZN ? ? A CYS 418 A ZN 503 1_555 ? ? ? ? ? ? ? 2.346 ? ? metalc11 metalc ? ? A HIS 87 NE2 ? ? ? 1_555 F ZN . ZN ? ? A HIS 431 A ZN 503 1_555 ? ? ? ? ? ? ? 2.005 ? ? metalc12 metalc ? ? A HIS 91 NE2 ? ? ? 1_555 F ZN . ZN ? ? A HIS 435 A ZN 503 1_555 ? ? ? ? ? ? ? 2.001 ? ? hydrog1 hydrog ? ? B DG 2 N1 ? ? ? 1_555 C DC 11 N3 ? ? B DG 2 C DC 61 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? B DG 2 N2 ? ? ? 1_555 C DC 11 O2 ? ? B DG 2 C DC 61 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? B DG 2 O6 ? ? ? 1_555 C DC 11 N4 ? ? B DG 2 C DC 61 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? B DC 3 N3 ? ? ? 1_555 C DG 10 N1 ? ? B DC 3 C DG 60 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? B DC 3 N4 ? ? ? 1_555 C DG 10 O6 ? ? B DC 3 C DG 60 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? B DC 3 O2 ? ? ? 1_555 C DG 10 N2 ? ? B DC 3 C DG 60 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? B DG 4 N1 ? ? ? 1_555 C DC 9 N3 ? ? B DG 4 C DC 59 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? B DG 4 N2 ? ? ? 1_555 C DC 9 O2 ? ? B DG 4 C DC 59 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? B DG 4 O6 ? ? ? 1_555 C DC 9 N4 ? ? B DG 4 C DC 59 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? B DT 5 N3 ? ? ? 1_555 C DA 8 N1 A ? B DT 5 C DA 58 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? B DT 5 O4 ? ? ? 1_555 C DA 8 N6 A ? B DT 5 C DA 58 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? B DG 6 N1 ? ? ? 1_555 C DC 7 N3 A ? B DG 6 C DC 57 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? B DG 6 N2 ? ? ? 1_555 C DC 7 O2 A ? B DG 6 C DC 57 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? B DG 6 O6 ? ? ? 1_555 C DC 7 N4 A ? B DG 6 C DC 57 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? B DG 7 N1 ? ? ? 1_555 C DC 6 N3 ? ? B DG 7 C DC 56 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? B DG 7 N2 ? ? ? 1_555 C DC 6 O2 ? ? B DG 7 C DC 56 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? B DG 7 O6 ? ? ? 1_555 C DC 6 N4 ? ? B DG 7 C DC 56 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? B DG 8 N1 ? ? ? 1_555 C DC 5 N3 A ? B DG 8 C DC 55 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? B DG 8 N2 ? ? ? 1_555 C DC 5 O2 A ? B DG 8 C DC 55 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? B DG 8 O6 ? ? ? 1_555 C DC 5 N4 A ? B DG 8 C DC 55 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? B DT 11 N3 ? ? ? 1_555 C DA 2 N1 A ? B DT 11 C DA 52 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? B DT 11 O4 ? ? ? 1_555 C DA 2 N6 A ? B DT 11 C DA 52 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? hydrog ? ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 2 ? B ? 2 ? C ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel B 1 2 ? anti-parallel C 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 TYR A 9 ? GLN A 10 ? TYR A 353 GLN A 354 A 2 ARG A 19 ? PHE A 20 ? ARG A 363 PHE A 364 B 1 PHE A 39 ? GLN A 40 ? PHE A 383 GLN A 384 B 2 LYS A 47 ? PHE A 48 ? LYS A 391 PHE A 392 C 1 PHE A 67 ? SER A 68 ? PHE A 411 SER A 412 C 2 LYS A 77 ? PHE A 78 ? LYS A 421 PHE A 422 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N TYR A 9 ? N TYR A 353 O PHE A 20 ? O PHE A 364 B 1 2 N PHE A 39 ? N PHE A 383 O PHE A 48 ? O PHE A 392 C 1 2 N PHE A 67 ? N PHE A 411 O PHE A 78 ? O PHE A 422 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A ZN 501 ? 4 'BINDING SITE FOR RESIDUE ZN A 501' AC2 Software A ZN 502 ? 4 'BINDING SITE FOR RESIDUE ZN A 502' AC3 Software A ZN 503 ? 4 'BINDING SITE FOR RESIDUE ZN A 503' AC4 Software A EDO 504 ? 6 'BINDING SITE FOR RESIDUE EDO A 504' AC5 Software C EDO 101 ? 6 'BINDING SITE FOR RESIDUE EDO C 101' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 4 CYS A 11 ? CYS A 355 . ? 1_555 ? 2 AC1 4 CYS A 16 ? CYS A 360 . ? 1_555 ? 3 AC1 4 HIS A 29 ? HIS A 373 . ? 1_555 ? 4 AC1 4 HIS A 33 ? HIS A 377 . ? 1_555 ? 5 AC2 4 CYS A 41 ? CYS A 385 . ? 1_555 ? 6 AC2 4 CYS A 44 ? CYS A 388 . ? 1_555 ? 7 AC2 4 HIS A 57 ? HIS A 401 . ? 1_555 ? 8 AC2 4 HIS A 61 ? HIS A 405 . ? 1_555 ? 9 AC3 4 CYS A 69 ? CYS A 413 . ? 1_555 ? 10 AC3 4 CYS A 74 ? CYS A 418 . ? 1_555 ? 11 AC3 4 HIS A 87 ? HIS A 431 . ? 1_555 ? 12 AC3 4 HIS A 91 ? HIS A 435 . ? 1_555 ? 13 AC4 6 TYR A 9 ? TYR A 353 . ? 1_555 ? 14 AC4 6 ARG A 22 ? ARG A 366 . ? 1_555 ? 15 AC4 6 SER A 23 ? SER A 367 . ? 1_555 ? 16 AC4 6 HOH J . ? HOH B 142 . ? 1_556 ? 17 AC4 6 DC C 11 ? DC C 61 . ? 1_556 ? 18 AC4 6 HOH K . ? HOH C 216 . ? 1_555 ? 19 AC5 6 ARG A 22 ? ARG A 366 . ? 1_555 ? 20 AC5 6 ASP A 24 ? ASP A 368 . ? 1_555 ? 21 AC5 6 ARG A 28 ? ARG A 372 . ? 1_555 ? 22 AC5 6 5HC B 9 ? 5HC B 9 . ? 1_555 ? 23 AC5 6 5HC C 3 ? 5HC C 53 . ? 1_555 ? 24 AC5 6 DG C 4 ? DG C 54 . ? 1_555 ? # _database_PDB_matrix.entry_id 4R2P _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 4R2P _atom_sites.fract_transf_matrix[1][1] 0.014958 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.012724 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.027997 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S ZN # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 345 ? ? ? A . n A 1 2 PRO 2 346 ? ? ? A . n A 1 3 LEU 3 347 ? ? ? A . n A 1 4 GLY 4 348 ? ? ? A . n A 1 5 SER 5 349 349 SER SER A . n A 1 6 GLU 6 350 350 GLU GLU A . n A 1 7 LYS 7 351 351 LYS LYS A . n A 1 8 PRO 8 352 352 PRO PRO A . n A 1 9 TYR 9 353 353 TYR TYR A . n A 1 10 GLN 10 354 354 GLN GLN A . n A 1 11 CYS 11 355 355 CYS CYS A . n A 1 12 ASP 12 356 356 ASP ASP A . n A 1 13 PHE 13 357 357 PHE PHE A . n A 1 14 LYS 14 358 358 LYS LYS A . n A 1 15 ASP 15 359 359 ASP ASP A . n A 1 16 CYS 16 360 360 CYS CYS A . n A 1 17 GLU 17 361 361 GLU GLU A . n A 1 18 ARG 18 362 362 ARG ARG A . n A 1 19 ARG 19 363 363 ARG ARG A . n A 1 20 PHE 20 364 364 PHE PHE A . n A 1 21 SER 21 365 365 SER SER A . n A 1 22 ARG 22 366 366 ARG ARG A . n A 1 23 SER 23 367 367 SER SER A . n A 1 24 ASP 24 368 368 ASP ASP A . n A 1 25 GLN 25 369 369 GLN GLN A . n A 1 26 LEU 26 370 370 LEU LEU A . n A 1 27 LYS 27 371 371 LYS LYS A . n A 1 28 ARG 28 372 372 ARG ARG A . n A 1 29 HIS 29 373 373 HIS HIS A . n A 1 30 GLN 30 374 374 GLN GLN A . n A 1 31 ARG 31 375 375 ARG ARG A . n A 1 32 ARG 32 376 376 ARG ARG A . n A 1 33 HIS 33 377 377 HIS HIS A . n A 1 34 THR 34 378 378 THR THR A . n A 1 35 GLY 35 379 379 GLY GLY A . n A 1 36 VAL 36 380 380 VAL VAL A . n A 1 37 LYS 37 381 381 LYS LYS A . n A 1 38 PRO 38 382 382 PRO PRO A . n A 1 39 PHE 39 383 383 PHE PHE A . n A 1 40 GLN 40 384 384 GLN GLN A . n A 1 41 CYS 41 385 385 CYS CYS A . n A 1 42 LYS 42 386 386 LYS LYS A . n A 1 43 THR 43 387 387 THR THR A . n A 1 44 CYS 44 388 388 CYS CYS A . n A 1 45 GLN 45 389 389 GLN GLN A . n A 1 46 ARG 46 390 390 ARG ARG A . n A 1 47 LYS 47 391 391 LYS LYS A . n A 1 48 PHE 48 392 392 PHE PHE A . n A 1 49 SER 49 393 393 SER SER A . n A 1 50 ARG 50 394 394 ARG ARG A . n A 1 51 SER 51 395 395 SER SER A . n A 1 52 ASP 52 396 396 ASP ASP A . n A 1 53 HIS 53 397 397 HIS HIS A . n A 1 54 LEU 54 398 398 LEU LEU A . n A 1 55 LYS 55 399 399 LYS LYS A . n A 1 56 THR 56 400 400 THR THR A . n A 1 57 HIS 57 401 401 HIS HIS A . n A 1 58 THR 58 402 402 THR THR A . n A 1 59 ARG 59 403 403 ARG ARG A . n A 1 60 THR 60 404 404 THR THR A . n A 1 61 HIS 61 405 405 HIS HIS A . n A 1 62 THR 62 406 406 THR THR A . n A 1 63 GLY 63 407 407 GLY GLY A . n A 1 64 GLU 64 408 408 GLU GLU A . n A 1 65 LYS 65 409 409 LYS LYS A . n A 1 66 PRO 66 410 410 PRO PRO A . n A 1 67 PHE 67 411 411 PHE PHE A . n A 1 68 SER 68 412 412 SER SER A . n A 1 69 CYS 69 413 413 CYS CYS A . n A 1 70 ARG 70 414 414 ARG ARG A . n A 1 71 TRP 71 415 415 TRP TRP A . n A 1 72 PRO 72 416 416 PRO PRO A . n A 1 73 SER 73 417 417 SER SER A . n A 1 74 CYS 74 418 418 CYS CYS A . n A 1 75 GLN 75 419 419 GLN GLN A . n A 1 76 LYS 76 420 420 LYS LYS A . n A 1 77 LYS 77 421 421 LYS LYS A . n A 1 78 PHE 78 422 422 PHE PHE A . n A 1 79 ALA 79 423 423 ALA ALA A . n A 1 80 ARG 80 424 424 ARG ARG A . n A 1 81 SER 81 425 425 SER SER A . n A 1 82 ASP 82 426 426 ASP ASP A . n A 1 83 GLU 83 427 427 GLU GLU A . n A 1 84 LEU 84 428 428 LEU LEU A . n A 1 85 VAL 85 429 429 VAL VAL A . n A 1 86 ARG 86 430 430 ARG ARG A . n A 1 87 HIS 87 431 431 HIS HIS A . n A 1 88 HIS 88 432 432 HIS HIS A . n A 1 89 ASN 89 433 433 ASN ASN A . n A 1 90 MET 90 434 434 MET MET A . n A 1 91 HIS 91 435 435 HIS HIS A . n A 1 92 GLN 92 436 436 GLN GLN A . n A 1 93 ARG 93 437 437 ARG ARG A . n B 2 1 DA 1 1 1 DA DA B . n B 2 2 DG 2 2 2 DG DG B . n B 2 3 DC 3 3 3 DC DC B . n B 2 4 DG 4 4 4 DG DG B . n B 2 5 DT 5 5 5 DT DT B . n B 2 6 DG 6 6 6 DG DG B . n B 2 7 DG 7 7 7 DG DG B . n B 2 8 DG 8 8 8 DG DG B . n B 2 9 5HC 9 9 9 5HC 5HC B . n B 2 10 DG 10 10 10 DG DG B . n B 2 11 DT 11 11 11 DT DT B . n C 3 1 DT 1 51 51 DT DT C . n C 3 2 DA 2 52 52 DA DA C . n C 3 3 5HC 3 53 53 5HC 5HC C . n C 3 4 DG 4 54 54 DG DG C . n C 3 5 DC 5 55 55 DC DC C . n C 3 6 DC 6 56 56 DC DC C . n C 3 7 DC 7 57 57 DC DC C . n C 3 8 DA 8 58 58 DA DA C . n C 3 9 DC 9 59 59 DC DC C . n C 3 10 DG 10 60 60 DG DG C . n C 3 11 DC 11 61 61 DC DC C . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 ZN 1 501 202 ZN ZN A . E 4 ZN 1 502 203 ZN ZN A . F 4 ZN 1 503 204 ZN ZN A . G 5 EDO 1 504 3 EDO EDO A . H 5 EDO 1 101 1 EDO EDO C . I 6 HOH 1 601 1 HOH HOH A . I 6 HOH 2 602 4 HOH HOH A . I 6 HOH 3 603 5 HOH HOH A . I 6 HOH 4 604 6 HOH HOH A . I 6 HOH 5 605 7 HOH HOH A . I 6 HOH 6 606 8 HOH HOH A . I 6 HOH 7 607 9 HOH HOH A . I 6 HOH 8 608 10 HOH HOH A . I 6 HOH 9 609 15 HOH HOH A . I 6 HOH 10 610 17 HOH HOH A . I 6 HOH 11 611 18 HOH HOH A . I 6 HOH 12 612 19 HOH HOH A . I 6 HOH 13 613 21 HOH HOH A . I 6 HOH 14 614 23 HOH HOH A . I 6 HOH 15 615 25 HOH HOH A . I 6 HOH 16 616 26 HOH HOH A . I 6 HOH 17 617 27 HOH HOH A . I 6 HOH 18 618 29 HOH HOH A . I 6 HOH 19 619 30 HOH HOH A . I 6 HOH 20 620 32 HOH HOH A . I 6 HOH 21 621 33 HOH HOH A . I 6 HOH 22 622 34 HOH HOH A . I 6 HOH 23 623 36 HOH HOH A . I 6 HOH 24 624 38 HOH HOH A . I 6 HOH 25 625 39 HOH HOH A . I 6 HOH 26 626 40 HOH HOH A . I 6 HOH 27 627 41 HOH HOH A . I 6 HOH 28 628 43 HOH HOH A . I 6 HOH 29 629 45 HOH HOH A . I 6 HOH 30 630 47 HOH HOH A . I 6 HOH 31 631 49 HOH HOH A . I 6 HOH 32 632 50 HOH HOH A . I 6 HOH 33 633 51 HOH HOH A . I 6 HOH 34 634 54 HOH HOH A . I 6 HOH 35 635 55 HOH HOH A . I 6 HOH 36 636 56 HOH HOH A . I 6 HOH 37 637 58 HOH HOH A . I 6 HOH 38 638 60 HOH HOH A . I 6 HOH 39 639 75 HOH HOH A . I 6 HOH 40 640 76 HOH HOH A . I 6 HOH 41 641 77 HOH HOH A . I 6 HOH 42 642 78 HOH HOH A . I 6 HOH 43 643 79 HOH HOH A . I 6 HOH 44 644 80 HOH HOH A . I 6 HOH 45 645 81 HOH HOH A . I 6 HOH 46 646 82 HOH HOH A . I 6 HOH 47 647 83 HOH HOH A . I 6 HOH 48 648 86 HOH HOH A . I 6 HOH 49 649 91 HOH HOH A . I 6 HOH 50 650 102 HOH HOH A . I 6 HOH 51 651 105 HOH HOH A . I 6 HOH 52 652 106 HOH HOH A . I 6 HOH 53 653 107 HOH HOH A . I 6 HOH 54 654 108 HOH HOH A . I 6 HOH 55 655 109 HOH HOH A . I 6 HOH 56 656 110 HOH HOH A . I 6 HOH 57 657 111 HOH HOH A . I 6 HOH 58 658 112 HOH HOH A . I 6 HOH 59 659 113 HOH HOH A . I 6 HOH 60 660 125 HOH HOH A . I 6 HOH 61 661 127 HOH HOH A . I 6 HOH 62 662 129 HOH HOH A . I 6 HOH 63 663 130 HOH HOH A . I 6 HOH 64 664 131 HOH HOH A . I 6 HOH 65 665 132 HOH HOH A . I 6 HOH 66 666 133 HOH HOH A . I 6 HOH 67 667 136 HOH HOH A . I 6 HOH 68 668 137 HOH HOH A . I 6 HOH 69 669 138 HOH HOH A . I 6 HOH 70 670 140 HOH HOH A . I 6 HOH 71 671 145 HOH HOH A . I 6 HOH 72 672 146 HOH HOH A . I 6 HOH 73 673 14 HOH HOH A . J 6 HOH 1 101 2 HOH HOH B . J 6 HOH 2 102 3 HOH HOH B . J 6 HOH 3 103 11 HOH HOH B . J 6 HOH 4 104 12 HOH HOH B . J 6 HOH 5 105 13 HOH HOH B . J 6 HOH 6 106 20 HOH HOH B . J 6 HOH 7 107 22 HOH HOH B . J 6 HOH 8 108 24 HOH HOH B . J 6 HOH 9 109 28 HOH HOH B . J 6 HOH 10 110 35 HOH HOH B . J 6 HOH 11 111 37 HOH HOH B . J 6 HOH 12 112 42 HOH HOH B . J 6 HOH 13 113 44 HOH HOH B . J 6 HOH 14 114 46 HOH HOH B . J 6 HOH 15 115 52 HOH HOH B . J 6 HOH 16 116 53 HOH HOH B . J 6 HOH 17 117 57 HOH HOH B . J 6 HOH 18 118 59 HOH HOH B . J 6 HOH 19 119 64 HOH HOH B . J 6 HOH 20 120 65 HOH HOH B . J 6 HOH 21 121 66 HOH HOH B . J 6 HOH 22 122 69 HOH HOH B . J 6 HOH 23 123 71 HOH HOH B . J 6 HOH 24 124 74 HOH HOH B . J 6 HOH 25 125 93 HOH HOH B . J 6 HOH 26 126 94 HOH HOH B . J 6 HOH 27 127 95 HOH HOH B . J 6 HOH 28 128 96 HOH HOH B . J 6 HOH 29 129 97 HOH HOH B . J 6 HOH 30 130 98 HOH HOH B . J 6 HOH 31 131 100 HOH HOH B . J 6 HOH 32 132 119 HOH HOH B . J 6 HOH 33 133 121 HOH HOH B . J 6 HOH 34 134 122 HOH HOH B . J 6 HOH 35 135 123 HOH HOH B . J 6 HOH 36 136 128 HOH HOH B . J 6 HOH 37 137 134 HOH HOH B . J 6 HOH 38 138 135 HOH HOH B . J 6 HOH 39 139 143 HOH HOH B . J 6 HOH 40 140 68 HOH HOH B . J 6 HOH 41 141 70 HOH HOH B . J 6 HOH 42 142 73 HOH HOH B . K 6 HOH 1 201 16 HOH HOH C . K 6 HOH 2 202 31 HOH HOH C . K 6 HOH 3 203 48 HOH HOH C . K 6 HOH 4 204 61 HOH HOH C . K 6 HOH 5 205 62 HOH HOH C . K 6 HOH 6 206 63 HOH HOH C . K 6 HOH 7 207 67 HOH HOH C . K 6 HOH 8 208 72 HOH HOH C . K 6 HOH 9 209 84 HOH HOH C . K 6 HOH 10 210 85 HOH HOH C . K 6 HOH 11 211 87 HOH HOH C . K 6 HOH 12 212 88 HOH HOH C . K 6 HOH 13 213 89 HOH HOH C . K 6 HOH 14 214 90 HOH HOH C . K 6 HOH 15 215 92 HOH HOH C . K 6 HOH 16 216 99 HOH HOH C . K 6 HOH 17 217 101 HOH HOH C . K 6 HOH 18 218 104 HOH HOH C . K 6 HOH 19 219 115 HOH HOH C . K 6 HOH 20 220 116 HOH HOH C . K 6 HOH 21 221 117 HOH HOH C . K 6 HOH 22 222 118 HOH HOH C . K 6 HOH 23 223 120 HOH HOH C . K 6 HOH 24 224 124 HOH HOH C . K 6 HOH 25 225 126 HOH HOH C . K 6 HOH 26 226 139 HOH HOH C . K 6 HOH 27 227 141 HOH HOH C . K 6 HOH 28 228 142 HOH HOH C . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 B 5HC 9 B 5HC 9 ? DC ? 2 C 5HC 3 C 5HC 53 ? DC ? # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 4350 ? 1 MORE -10 ? 1 'SSA (A^2)' 8700 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 SG ? A CYS 11 ? A CYS 355 ? 1_555 ZN ? D ZN . ? A ZN 501 ? 1_555 SG ? A CYS 16 ? A CYS 360 ? 1_555 117.6 ? 2 SG ? A CYS 11 ? A CYS 355 ? 1_555 ZN ? D ZN . ? A ZN 501 ? 1_555 NE2 ? A HIS 29 ? A HIS 373 ? 1_555 110.8 ? 3 SG ? A CYS 16 ? A CYS 360 ? 1_555 ZN ? D ZN . ? A ZN 501 ? 1_555 NE2 ? A HIS 29 ? A HIS 373 ? 1_555 105.0 ? 4 SG ? A CYS 11 ? A CYS 355 ? 1_555 ZN ? D ZN . ? A ZN 501 ? 1_555 NE2 ? A HIS 33 ? A HIS 377 ? 1_555 109.7 ? 5 SG ? A CYS 16 ? A CYS 360 ? 1_555 ZN ? D ZN . ? A ZN 501 ? 1_555 NE2 ? A HIS 33 ? A HIS 377 ? 1_555 109.7 ? 6 NE2 ? A HIS 29 ? A HIS 373 ? 1_555 ZN ? D ZN . ? A ZN 501 ? 1_555 NE2 ? A HIS 33 ? A HIS 377 ? 1_555 103.0 ? 7 SG ? A CYS 41 ? A CYS 385 ? 1_555 ZN ? E ZN . ? A ZN 502 ? 1_555 SG ? A CYS 44 ? A CYS 388 ? 1_555 114.0 ? 8 SG ? A CYS 41 ? A CYS 385 ? 1_555 ZN ? E ZN . ? A ZN 502 ? 1_555 NE2 ? A HIS 57 ? A HIS 401 ? 1_555 113.8 ? 9 SG ? A CYS 44 ? A CYS 388 ? 1_555 ZN ? E ZN . ? A ZN 502 ? 1_555 NE2 ? A HIS 57 ? A HIS 401 ? 1_555 104.1 ? 10 SG ? A CYS 41 ? A CYS 385 ? 1_555 ZN ? E ZN . ? A ZN 502 ? 1_555 NE2 ? A HIS 61 ? A HIS 405 ? 1_555 106.0 ? 11 SG ? A CYS 44 ? A CYS 388 ? 1_555 ZN ? E ZN . ? A ZN 502 ? 1_555 NE2 ? A HIS 61 ? A HIS 405 ? 1_555 114.1 ? 12 NE2 ? A HIS 57 ? A HIS 401 ? 1_555 ZN ? E ZN . ? A ZN 502 ? 1_555 NE2 ? A HIS 61 ? A HIS 405 ? 1_555 104.6 ? 13 SG ? A CYS 69 ? A CYS 413 ? 1_555 ZN ? F ZN . ? A ZN 503 ? 1_555 SG ? A CYS 74 ? A CYS 418 ? 1_555 116.7 ? 14 SG ? A CYS 69 ? A CYS 413 ? 1_555 ZN ? F ZN . ? A ZN 503 ? 1_555 NE2 ? A HIS 87 ? A HIS 431 ? 1_555 104.4 ? 15 SG ? A CYS 74 ? A CYS 418 ? 1_555 ZN ? F ZN . ? A ZN 503 ? 1_555 NE2 ? A HIS 87 ? A HIS 431 ? 1_555 115.0 ? 16 SG ? A CYS 69 ? A CYS 413 ? 1_555 ZN ? F ZN . ? A ZN 503 ? 1_555 NE2 ? A HIS 91 ? A HIS 435 ? 1_555 107.0 ? 17 SG ? A CYS 74 ? A CYS 418 ? 1_555 ZN ? F ZN . ? A ZN 503 ? 1_555 NE2 ? A HIS 91 ? A HIS 435 ? 1_555 116.2 ? 18 NE2 ? A HIS 87 ? A HIS 431 ? 1_555 ZN ? F ZN . ? A ZN 503 ? 1_555 NE2 ? A HIS 91 ? A HIS 435 ? 1_555 94.9 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2014-10-08 2 'Structure model' 1 1 2014-11-19 3 'Structure model' 1 2 2023-09-20 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' 5 3 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' chem_comp_atom 2 3 'Structure model' chem_comp_bond 3 3 'Structure model' database_2 4 3 'Structure model' pdbx_initial_refinement_model 5 3 'Structure model' pdbx_struct_conn_angle 6 3 'Structure model' struct_conn 7 3 'Structure model' struct_ref_seq_dif 8 3 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 4 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 5 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 6 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 7 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 8 3 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_seq_id' 9 3 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_asym_id' 10 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 11 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 12 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 13 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 14 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 15 3 'Structure model' '_pdbx_struct_conn_angle.value' 16 3 'Structure model' '_struct_conn.pdbx_dist_value' 17 3 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 18 3 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 19 3 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 20 3 'Structure model' '_struct_conn.ptnr1_label_atom_id' 21 3 'Structure model' '_struct_conn.ptnr1_label_comp_id' 22 3 'Structure model' '_struct_conn.ptnr1_label_seq_id' 23 3 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 24 3 'Structure model' '_struct_conn.ptnr2_label_asym_id' 25 3 'Structure model' '_struct_ref_seq_dif.details' 26 3 'Structure model' '_struct_site.pdbx_auth_asym_id' 27 3 'Structure model' '_struct_site.pdbx_auth_comp_id' 28 3 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal HKL-2000 'data collection' . ? 1 PHENIX 'model building' . ? 2 PHENIX refinement '(phenix.refine: 1.9_1692)' ? 3 HKL-2000 'data reduction' . ? 4 HKL-2000 'data scaling' . ? 5 PHENIX phasing . ? 6 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O4'" B DC 3 ? ? "C1'" B DC 3 ? ? N1 B DC 3 ? ? 111.28 108.30 2.98 0.30 N 2 1 "O4'" B DT 5 ? ? "C1'" B DT 5 ? ? N1 B DT 5 ? ? 110.58 108.30 2.28 0.30 N 3 1 "O4'" C DG 54 ? B "C1'" C DG 54 ? B N9 C DG 54 ? B 111.89 108.30 3.59 0.30 N 4 1 "O3'" C DG 54 ? B P C DC 55 ? B OP2 C DC 55 ? B 119.00 110.50 8.50 1.10 Y # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A SER 349 ? OG ? A SER 5 OG 2 1 Y 1 A GLN 354 ? CG ? A GLN 10 CG 3 1 Y 1 A GLN 354 ? CD ? A GLN 10 CD 4 1 Y 1 A GLN 354 ? OE1 ? A GLN 10 OE1 5 1 Y 1 A GLN 354 ? NE2 ? A GLN 10 NE2 6 1 Y 1 A SER 412 ? OG ? A SER 68 OG 7 1 Y 1 A ARG 437 ? CG ? A ARG 93 CG 8 1 Y 1 A ARG 437 ? CD ? A ARG 93 CD 9 1 Y 1 A ARG 437 ? NE ? A ARG 93 NE 10 1 Y 1 A ARG 437 ? CZ ? A ARG 93 CZ 11 1 Y 1 A ARG 437 ? NH1 ? A ARG 93 NH1 12 1 Y 1 A ARG 437 ? NH2 ? A ARG 93 NH2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 345 ? A GLY 1 2 1 Y 1 A PRO 346 ? A PRO 2 3 1 Y 1 A LEU 347 ? A LEU 3 4 1 Y 1 A GLY 348 ? A GLY 4 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 5HC P P N N 1 5HC OP1 O N N 2 5HC OP2 O N N 3 5HC "O5'" O N N 4 5HC "C5'" C N N 5 5HC "C4'" C N R 6 5HC "O4'" O N N 7 5HC "C3'" C N S 8 5HC "O3'" O N N 9 5HC "C2'" C N N 10 5HC "C1'" C N R 11 5HC N1 N N N 12 5HC C2 C N N 13 5HC O2 O N N 14 5HC N3 N N N 15 5HC C4 C N N 16 5HC N4 N N N 17 5HC C5 C N N 18 5HC C5M C N N 19 5HC O5 O N N 20 5HC C6 C N N 21 5HC OP3 O N N 22 5HC HOP2 H N N 23 5HC "H5'" H N N 24 5HC "H5''" H N N 25 5HC H4 H N N 26 5HC "H3'" H N N 27 5HC "HO3'" H N N 28 5HC "H2'" H N N 29 5HC "H2''" H N N 30 5HC "H1'" H N N 31 5HC HN41 H N N 32 5HC HN42 H N N 33 5HC H5M2 H N N 34 5HC H5M1 H N N 35 5HC HO5 H N N 36 5HC H6 H N N 37 5HC HOP3 H N N 38 ALA N N N N 39 ALA CA C N S 40 ALA C C N N 41 ALA O O N N 42 ALA CB C N N 43 ALA OXT O N N 44 ALA H H N N 45 ALA H2 H N N 46 ALA HA H N N 47 ALA HB1 H N N 48 ALA HB2 H N N 49 ALA HB3 H N N 50 ALA HXT H N N 51 ARG N N N N 52 ARG CA C N S 53 ARG C C N N 54 ARG O O N N 55 ARG CB C N N 56 ARG CG C N N 57 ARG CD C N N 58 ARG NE N N N 59 ARG CZ C N N 60 ARG NH1 N N N 61 ARG NH2 N N N 62 ARG OXT O N N 63 ARG H H N N 64 ARG H2 H N N 65 ARG HA H N N 66 ARG HB2 H N N 67 ARG HB3 H N N 68 ARG HG2 H N N 69 ARG HG3 H N N 70 ARG HD2 H N N 71 ARG HD3 H N N 72 ARG HE H N N 73 ARG HH11 H N N 74 ARG HH12 H N N 75 ARG HH21 H N N 76 ARG HH22 H N N 77 ARG HXT H N N 78 ASN N N N N 79 ASN CA C N S 80 ASN C C N N 81 ASN O O N N 82 ASN CB C N N 83 ASN CG C N N 84 ASN OD1 O N N 85 ASN ND2 N N N 86 ASN OXT O N N 87 ASN H H N N 88 ASN H2 H N N 89 ASN HA H N N 90 ASN HB2 H N N 91 ASN HB3 H N N 92 ASN HD21 H N N 93 ASN HD22 H N N 94 ASN HXT H N N 95 ASP N N N N 96 ASP CA C N S 97 ASP C C N N 98 ASP O O N N 99 ASP CB C N N 100 ASP CG C N N 101 ASP OD1 O N N 102 ASP OD2 O N N 103 ASP OXT O N N 104 ASP H H N N 105 ASP H2 H N N 106 ASP HA H N N 107 ASP HB2 H N N 108 ASP HB3 H N N 109 ASP HD2 H N N 110 ASP HXT H N N 111 CYS N N N N 112 CYS CA C N R 113 CYS C C N N 114 CYS O O N N 115 CYS CB C N N 116 CYS SG S N N 117 CYS OXT O N N 118 CYS H H N N 119 CYS H2 H N N 120 CYS HA H N N 121 CYS HB2 H N N 122 CYS HB3 H N N 123 CYS HG H N N 124 CYS HXT H N N 125 DA OP3 O N N 126 DA P P N N 127 DA OP1 O N N 128 DA OP2 O N N 129 DA "O5'" O N N 130 DA "C5'" C N N 131 DA "C4'" C N R 132 DA "O4'" O N N 133 DA "C3'" C N S 134 DA "O3'" O N N 135 DA "C2'" C N N 136 DA "C1'" C N R 137 DA N9 N Y N 138 DA C8 C Y N 139 DA N7 N Y N 140 DA C5 C Y N 141 DA C6 C Y N 142 DA N6 N N N 143 DA N1 N Y N 144 DA C2 C Y N 145 DA N3 N Y N 146 DA C4 C Y N 147 DA HOP3 H N N 148 DA HOP2 H N N 149 DA "H5'" H N N 150 DA "H5''" H N N 151 DA "H4'" H N N 152 DA "H3'" H N N 153 DA "HO3'" H N N 154 DA "H2'" H N N 155 DA "H2''" H N N 156 DA "H1'" H N N 157 DA H8 H N N 158 DA H61 H N N 159 DA H62 H N N 160 DA H2 H N N 161 DC OP3 O N N 162 DC P P N N 163 DC OP1 O N N 164 DC OP2 O N N 165 DC "O5'" O N N 166 DC "C5'" C N N 167 DC "C4'" C N R 168 DC "O4'" O N N 169 DC "C3'" C N S 170 DC "O3'" O N N 171 DC "C2'" C N N 172 DC "C1'" C N R 173 DC N1 N N N 174 DC C2 C N N 175 DC O2 O N N 176 DC N3 N N N 177 DC C4 C N N 178 DC N4 N N N 179 DC C5 C N N 180 DC C6 C N N 181 DC HOP3 H N N 182 DC HOP2 H N N 183 DC "H5'" H N N 184 DC "H5''" H N N 185 DC "H4'" H N N 186 DC "H3'" H N N 187 DC "HO3'" H N N 188 DC "H2'" H N N 189 DC "H2''" H N N 190 DC "H1'" H N N 191 DC H41 H N N 192 DC H42 H N N 193 DC H5 H N N 194 DC H6 H N N 195 DG OP3 O N N 196 DG P P N N 197 DG OP1 O N N 198 DG OP2 O N N 199 DG "O5'" O N N 200 DG "C5'" C N N 201 DG "C4'" C N R 202 DG "O4'" O N N 203 DG "C3'" C N S 204 DG "O3'" O N N 205 DG "C2'" C N N 206 DG "C1'" C N R 207 DG N9 N Y N 208 DG C8 C Y N 209 DG N7 N Y N 210 DG C5 C Y N 211 DG C6 C N N 212 DG O6 O N N 213 DG N1 N N N 214 DG C2 C N N 215 DG N2 N N N 216 DG N3 N N N 217 DG C4 C Y N 218 DG HOP3 H N N 219 DG HOP2 H N N 220 DG "H5'" H N N 221 DG "H5''" H N N 222 DG "H4'" H N N 223 DG "H3'" H N N 224 DG "HO3'" H N N 225 DG "H2'" H N N 226 DG "H2''" H N N 227 DG "H1'" H N N 228 DG H8 H N N 229 DG H1 H N N 230 DG H21 H N N 231 DG H22 H N N 232 DT OP3 O N N 233 DT P P N N 234 DT OP1 O N N 235 DT OP2 O N N 236 DT "O5'" O N N 237 DT "C5'" C N N 238 DT "C4'" C N R 239 DT "O4'" O N N 240 DT "C3'" C N S 241 DT "O3'" O N N 242 DT "C2'" C N N 243 DT "C1'" C N R 244 DT N1 N N N 245 DT C2 C N N 246 DT O2 O N N 247 DT N3 N N N 248 DT C4 C N N 249 DT O4 O N N 250 DT C5 C N N 251 DT C7 C N N 252 DT C6 C N N 253 DT HOP3 H N N 254 DT HOP2 H N N 255 DT "H5'" H N N 256 DT "H5''" H N N 257 DT "H4'" H N N 258 DT "H3'" H N N 259 DT "HO3'" H N N 260 DT "H2'" H N N 261 DT "H2''" H N N 262 DT "H1'" H N N 263 DT H3 H N N 264 DT H71 H N N 265 DT H72 H N N 266 DT H73 H N N 267 DT H6 H N N 268 EDO C1 C N N 269 EDO O1 O N N 270 EDO C2 C N N 271 EDO O2 O N N 272 EDO H11 H N N 273 EDO H12 H N N 274 EDO HO1 H N N 275 EDO H21 H N N 276 EDO H22 H N N 277 EDO HO2 H N N 278 GLN N N N N 279 GLN CA C N S 280 GLN C C N N 281 GLN O O N N 282 GLN CB C N N 283 GLN CG C N N 284 GLN CD C N N 285 GLN OE1 O N N 286 GLN NE2 N N N 287 GLN OXT O N N 288 GLN H H N N 289 GLN H2 H N N 290 GLN HA H N N 291 GLN HB2 H N N 292 GLN HB3 H N N 293 GLN HG2 H N N 294 GLN HG3 H N N 295 GLN HE21 H N N 296 GLN HE22 H N N 297 GLN HXT H N N 298 GLU N N N N 299 GLU CA C N S 300 GLU C C N N 301 GLU O O N N 302 GLU CB C N N 303 GLU CG C N N 304 GLU CD C N N 305 GLU OE1 O N N 306 GLU OE2 O N N 307 GLU OXT O N N 308 GLU H H N N 309 GLU H2 H N N 310 GLU HA H N N 311 GLU HB2 H N N 312 GLU HB3 H N N 313 GLU HG2 H N N 314 GLU HG3 H N N 315 GLU HE2 H N N 316 GLU HXT H N N 317 GLY N N N N 318 GLY CA C N N 319 GLY C C N N 320 GLY O O N N 321 GLY OXT O N N 322 GLY H H N N 323 GLY H2 H N N 324 GLY HA2 H N N 325 GLY HA3 H N N 326 GLY HXT H N N 327 HIS N N N N 328 HIS CA C N S 329 HIS C C N N 330 HIS O O N N 331 HIS CB C N N 332 HIS CG C Y N 333 HIS ND1 N Y N 334 HIS CD2 C Y N 335 HIS CE1 C Y N 336 HIS NE2 N Y N 337 HIS OXT O N N 338 HIS H H N N 339 HIS H2 H N N 340 HIS HA H N N 341 HIS HB2 H N N 342 HIS HB3 H N N 343 HIS HD1 H N N 344 HIS HD2 H N N 345 HIS HE1 H N N 346 HIS HE2 H N N 347 HIS HXT H N N 348 HOH O O N N 349 HOH H1 H N N 350 HOH H2 H N N 351 LEU N N N N 352 LEU CA C N S 353 LEU C C N N 354 LEU O O N N 355 LEU CB C N N 356 LEU CG C N N 357 LEU CD1 C N N 358 LEU CD2 C N N 359 LEU OXT O N N 360 LEU H H N N 361 LEU H2 H N N 362 LEU HA H N N 363 LEU HB2 H N N 364 LEU HB3 H N N 365 LEU HG H N N 366 LEU HD11 H N N 367 LEU HD12 H N N 368 LEU HD13 H N N 369 LEU HD21 H N N 370 LEU HD22 H N N 371 LEU HD23 H N N 372 LEU HXT H N N 373 LYS N N N N 374 LYS CA C N S 375 LYS C C N N 376 LYS O O N N 377 LYS CB C N N 378 LYS CG C N N 379 LYS CD C N N 380 LYS CE C N N 381 LYS NZ N N N 382 LYS OXT O N N 383 LYS H H N N 384 LYS H2 H N N 385 LYS HA H N N 386 LYS HB2 H N N 387 LYS HB3 H N N 388 LYS HG2 H N N 389 LYS HG3 H N N 390 LYS HD2 H N N 391 LYS HD3 H N N 392 LYS HE2 H N N 393 LYS HE3 H N N 394 LYS HZ1 H N N 395 LYS HZ2 H N N 396 LYS HZ3 H N N 397 LYS HXT H N N 398 MET N N N N 399 MET CA C N S 400 MET C C N N 401 MET O O N N 402 MET CB C N N 403 MET CG C N N 404 MET SD S N N 405 MET CE C N N 406 MET OXT O N N 407 MET H H N N 408 MET H2 H N N 409 MET HA H N N 410 MET HB2 H N N 411 MET HB3 H N N 412 MET HG2 H N N 413 MET HG3 H N N 414 MET HE1 H N N 415 MET HE2 H N N 416 MET HE3 H N N 417 MET HXT H N N 418 PHE N N N N 419 PHE CA C N S 420 PHE C C N N 421 PHE O O N N 422 PHE CB C N N 423 PHE CG C Y N 424 PHE CD1 C Y N 425 PHE CD2 C Y N 426 PHE CE1 C Y N 427 PHE CE2 C Y N 428 PHE CZ C Y N 429 PHE OXT O N N 430 PHE H H N N 431 PHE H2 H N N 432 PHE HA H N N 433 PHE HB2 H N N 434 PHE HB3 H N N 435 PHE HD1 H N N 436 PHE HD2 H N N 437 PHE HE1 H N N 438 PHE HE2 H N N 439 PHE HZ H N N 440 PHE HXT H N N 441 PRO N N N N 442 PRO CA C N S 443 PRO C C N N 444 PRO O O N N 445 PRO CB C N N 446 PRO CG C N N 447 PRO CD C N N 448 PRO OXT O N N 449 PRO H H N N 450 PRO HA H N N 451 PRO HB2 H N N 452 PRO HB3 H N N 453 PRO HG2 H N N 454 PRO HG3 H N N 455 PRO HD2 H N N 456 PRO HD3 H N N 457 PRO HXT H N N 458 SER N N N N 459 SER CA C N S 460 SER C C N N 461 SER O O N N 462 SER CB C N N 463 SER OG O N N 464 SER OXT O N N 465 SER H H N N 466 SER H2 H N N 467 SER HA H N N 468 SER HB2 H N N 469 SER HB3 H N N 470 SER HG H N N 471 SER HXT H N N 472 THR N N N N 473 THR CA C N S 474 THR C C N N 475 THR O O N N 476 THR CB C N R 477 THR OG1 O N N 478 THR CG2 C N N 479 THR OXT O N N 480 THR H H N N 481 THR H2 H N N 482 THR HA H N N 483 THR HB H N N 484 THR HG1 H N N 485 THR HG21 H N N 486 THR HG22 H N N 487 THR HG23 H N N 488 THR HXT H N N 489 TRP N N N N 490 TRP CA C N S 491 TRP C C N N 492 TRP O O N N 493 TRP CB C N N 494 TRP CG C Y N 495 TRP CD1 C Y N 496 TRP CD2 C Y N 497 TRP NE1 N Y N 498 TRP CE2 C Y N 499 TRP CE3 C Y N 500 TRP CZ2 C Y N 501 TRP CZ3 C Y N 502 TRP CH2 C Y N 503 TRP OXT O N N 504 TRP H H N N 505 TRP H2 H N N 506 TRP HA H N N 507 TRP HB2 H N N 508 TRP HB3 H N N 509 TRP HD1 H N N 510 TRP HE1 H N N 511 TRP HE3 H N N 512 TRP HZ2 H N N 513 TRP HZ3 H N N 514 TRP HH2 H N N 515 TRP HXT H N N 516 TYR N N N N 517 TYR CA C N S 518 TYR C C N N 519 TYR O O N N 520 TYR CB C N N 521 TYR CG C Y N 522 TYR CD1 C Y N 523 TYR CD2 C Y N 524 TYR CE1 C Y N 525 TYR CE2 C Y N 526 TYR CZ C Y N 527 TYR OH O N N 528 TYR OXT O N N 529 TYR H H N N 530 TYR H2 H N N 531 TYR HA H N N 532 TYR HB2 H N N 533 TYR HB3 H N N 534 TYR HD1 H N N 535 TYR HD2 H N N 536 TYR HE1 H N N 537 TYR HE2 H N N 538 TYR HH H N N 539 TYR HXT H N N 540 VAL N N N N 541 VAL CA C N S 542 VAL C C N N 543 VAL O O N N 544 VAL CB C N N 545 VAL CG1 C N N 546 VAL CG2 C N N 547 VAL OXT O N N 548 VAL H H N N 549 VAL H2 H N N 550 VAL HA H N N 551 VAL HB H N N 552 VAL HG11 H N N 553 VAL HG12 H N N 554 VAL HG13 H N N 555 VAL HG21 H N N 556 VAL HG22 H N N 557 VAL HG23 H N N 558 VAL HXT H N N 559 ZN ZN ZN N N 560 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 5HC "O4'" "C4'" sing N N 1 5HC "O4'" "C1'" sing N N 2 5HC "C4'" "C5'" sing N N 3 5HC "C4'" "C3'" sing N N 4 5HC O2 C2 doub N N 5 5HC "C1'" N1 sing N N 6 5HC "C1'" "C2'" sing N N 7 5HC "C5'" "O5'" sing N N 8 5HC C2 N1 sing N N 9 5HC C2 N3 sing N N 10 5HC N1 C6 sing N N 11 5HC N3 C4 doub N N 12 5HC "O5'" P sing N N 13 5HC "C2'" "C3'" sing N N 14 5HC C6 C5 doub N N 15 5HC "C3'" "O3'" sing N N 16 5HC P OP1 doub N N 17 5HC P OP2 sing N N 18 5HC C4 C5 sing N N 19 5HC C4 N4 sing N N 20 5HC C5 C5M sing N N 21 5HC C5M O5 sing N N 22 5HC P OP3 sing N N 23 5HC OP2 HOP2 sing N N 24 5HC "C5'" "H5'" sing N N 25 5HC "C5'" "H5''" sing N N 26 5HC "C4'" H4 sing N N 27 5HC "C3'" "H3'" sing N N 28 5HC "O3'" "HO3'" sing N N 29 5HC "C2'" "H2'" sing N N 30 5HC "C2'" "H2''" sing N N 31 5HC "C1'" "H1'" sing N N 32 5HC N4 HN41 sing N N 33 5HC N4 HN42 sing N N 34 5HC C5M H5M2 sing N N 35 5HC C5M H5M1 sing N N 36 5HC O5 HO5 sing N N 37 5HC C6 H6 sing N N 38 5HC OP3 HOP3 sing N N 39 ALA N CA sing N N 40 ALA N H sing N N 41 ALA N H2 sing N N 42 ALA CA C sing N N 43 ALA CA CB sing N N 44 ALA CA HA sing N N 45 ALA C O doub N N 46 ALA C OXT sing N N 47 ALA CB HB1 sing N N 48 ALA CB HB2 sing N N 49 ALA CB HB3 sing N N 50 ALA OXT HXT sing N N 51 ARG N CA sing N N 52 ARG N H sing N N 53 ARG N H2 sing N N 54 ARG CA C sing N N 55 ARG CA CB sing N N 56 ARG CA HA sing N N 57 ARG C O doub N N 58 ARG C OXT sing N N 59 ARG CB CG sing N N 60 ARG CB HB2 sing N N 61 ARG CB HB3 sing N N 62 ARG CG CD sing N N 63 ARG CG HG2 sing N N 64 ARG CG HG3 sing N N 65 ARG CD NE sing N N 66 ARG CD HD2 sing N N 67 ARG CD HD3 sing N N 68 ARG NE CZ sing N N 69 ARG NE HE sing N N 70 ARG CZ NH1 sing N N 71 ARG CZ NH2 doub N N 72 ARG NH1 HH11 sing N N 73 ARG NH1 HH12 sing N N 74 ARG NH2 HH21 sing N N 75 ARG NH2 HH22 sing N N 76 ARG OXT HXT sing N N 77 ASN N CA sing N N 78 ASN N H sing N N 79 ASN N H2 sing N N 80 ASN CA C sing N N 81 ASN CA CB sing N N 82 ASN CA HA sing N N 83 ASN C O doub N N 84 ASN C OXT sing N N 85 ASN CB CG sing N N 86 ASN CB HB2 sing N N 87 ASN CB HB3 sing N N 88 ASN CG OD1 doub N N 89 ASN CG ND2 sing N N 90 ASN ND2 HD21 sing N N 91 ASN ND2 HD22 sing N N 92 ASN OXT HXT sing N N 93 ASP N CA sing N N 94 ASP N H sing N N 95 ASP N H2 sing N N 96 ASP CA C sing N N 97 ASP CA CB sing N N 98 ASP CA HA sing N N 99 ASP C O doub N N 100 ASP C OXT sing N N 101 ASP CB CG sing N N 102 ASP CB HB2 sing N N 103 ASP CB HB3 sing N N 104 ASP CG OD1 doub N N 105 ASP CG OD2 sing N N 106 ASP OD2 HD2 sing N N 107 ASP OXT HXT sing N N 108 CYS N CA sing N N 109 CYS N H sing N N 110 CYS N H2 sing N N 111 CYS CA C sing N N 112 CYS CA CB sing N N 113 CYS CA HA sing N N 114 CYS C O doub N N 115 CYS C OXT sing N N 116 CYS CB SG sing N N 117 CYS CB HB2 sing N N 118 CYS CB HB3 sing N N 119 CYS SG HG sing N N 120 CYS OXT HXT sing N N 121 DA OP3 P sing N N 122 DA OP3 HOP3 sing N N 123 DA P OP1 doub N N 124 DA P OP2 sing N N 125 DA P "O5'" sing N N 126 DA OP2 HOP2 sing N N 127 DA "O5'" "C5'" sing N N 128 DA "C5'" "C4'" sing N N 129 DA "C5'" "H5'" sing N N 130 DA "C5'" "H5''" sing N N 131 DA "C4'" "O4'" sing N N 132 DA "C4'" "C3'" sing N N 133 DA "C4'" "H4'" sing N N 134 DA "O4'" "C1'" sing N N 135 DA "C3'" "O3'" sing N N 136 DA "C3'" "C2'" sing N N 137 DA "C3'" "H3'" sing N N 138 DA "O3'" "HO3'" sing N N 139 DA "C2'" "C1'" sing N N 140 DA "C2'" "H2'" sing N N 141 DA "C2'" "H2''" sing N N 142 DA "C1'" N9 sing N N 143 DA "C1'" "H1'" sing N N 144 DA N9 C8 sing Y N 145 DA N9 C4 sing Y N 146 DA C8 N7 doub Y N 147 DA C8 H8 sing N N 148 DA N7 C5 sing Y N 149 DA C5 C6 sing Y N 150 DA C5 C4 doub Y N 151 DA C6 N6 sing N N 152 DA C6 N1 doub Y N 153 DA N6 H61 sing N N 154 DA N6 H62 sing N N 155 DA N1 C2 sing Y N 156 DA C2 N3 doub Y N 157 DA C2 H2 sing N N 158 DA N3 C4 sing Y N 159 DC OP3 P sing N N 160 DC OP3 HOP3 sing N N 161 DC P OP1 doub N N 162 DC P OP2 sing N N 163 DC P "O5'" sing N N 164 DC OP2 HOP2 sing N N 165 DC "O5'" "C5'" sing N N 166 DC "C5'" "C4'" sing N N 167 DC "C5'" "H5'" sing N N 168 DC "C5'" "H5''" sing N N 169 DC "C4'" "O4'" sing N N 170 DC "C4'" "C3'" sing N N 171 DC "C4'" "H4'" sing N N 172 DC "O4'" "C1'" sing N N 173 DC "C3'" "O3'" sing N N 174 DC "C3'" "C2'" sing N N 175 DC "C3'" "H3'" sing N N 176 DC "O3'" "HO3'" sing N N 177 DC "C2'" "C1'" sing N N 178 DC "C2'" "H2'" sing N N 179 DC "C2'" "H2''" sing N N 180 DC "C1'" N1 sing N N 181 DC "C1'" "H1'" sing N N 182 DC N1 C2 sing N N 183 DC N1 C6 sing N N 184 DC C2 O2 doub N N 185 DC C2 N3 sing N N 186 DC N3 C4 doub N N 187 DC C4 N4 sing N N 188 DC C4 C5 sing N N 189 DC N4 H41 sing N N 190 DC N4 H42 sing N N 191 DC C5 C6 doub N N 192 DC C5 H5 sing N N 193 DC C6 H6 sing N N 194 DG OP3 P sing N N 195 DG OP3 HOP3 sing N N 196 DG P OP1 doub N N 197 DG P OP2 sing N N 198 DG P "O5'" sing N N 199 DG OP2 HOP2 sing N N 200 DG "O5'" "C5'" sing N N 201 DG "C5'" "C4'" sing N N 202 DG "C5'" "H5'" sing N N 203 DG "C5'" "H5''" sing N N 204 DG "C4'" "O4'" sing N N 205 DG "C4'" "C3'" sing N N 206 DG "C4'" "H4'" sing N N 207 DG "O4'" "C1'" sing N N 208 DG "C3'" "O3'" sing N N 209 DG "C3'" "C2'" sing N N 210 DG "C3'" "H3'" sing N N 211 DG "O3'" "HO3'" sing N N 212 DG "C2'" "C1'" sing N N 213 DG "C2'" "H2'" sing N N 214 DG "C2'" "H2''" sing N N 215 DG "C1'" N9 sing N N 216 DG "C1'" "H1'" sing N N 217 DG N9 C8 sing Y N 218 DG N9 C4 sing Y N 219 DG C8 N7 doub Y N 220 DG C8 H8 sing N N 221 DG N7 C5 sing Y N 222 DG C5 C6 sing N N 223 DG C5 C4 doub Y N 224 DG C6 O6 doub N N 225 DG C6 N1 sing N N 226 DG N1 C2 sing N N 227 DG N1 H1 sing N N 228 DG C2 N2 sing N N 229 DG C2 N3 doub N N 230 DG N2 H21 sing N N 231 DG N2 H22 sing N N 232 DG N3 C4 sing N N 233 DT OP3 P sing N N 234 DT OP3 HOP3 sing N N 235 DT P OP1 doub N N 236 DT P OP2 sing N N 237 DT P "O5'" sing N N 238 DT OP2 HOP2 sing N N 239 DT "O5'" "C5'" sing N N 240 DT "C5'" "C4'" sing N N 241 DT "C5'" "H5'" sing N N 242 DT "C5'" "H5''" sing N N 243 DT "C4'" "O4'" sing N N 244 DT "C4'" "C3'" sing N N 245 DT "C4'" "H4'" sing N N 246 DT "O4'" "C1'" sing N N 247 DT "C3'" "O3'" sing N N 248 DT "C3'" "C2'" sing N N 249 DT "C3'" "H3'" sing N N 250 DT "O3'" "HO3'" sing N N 251 DT "C2'" "C1'" sing N N 252 DT "C2'" "H2'" sing N N 253 DT "C2'" "H2''" sing N N 254 DT "C1'" N1 sing N N 255 DT "C1'" "H1'" sing N N 256 DT N1 C2 sing N N 257 DT N1 C6 sing N N 258 DT C2 O2 doub N N 259 DT C2 N3 sing N N 260 DT N3 C4 sing N N 261 DT N3 H3 sing N N 262 DT C4 O4 doub N N 263 DT C4 C5 sing N N 264 DT C5 C7 sing N N 265 DT C5 C6 doub N N 266 DT C7 H71 sing N N 267 DT C7 H72 sing N N 268 DT C7 H73 sing N N 269 DT C6 H6 sing N N 270 EDO C1 O1 sing N N 271 EDO C1 C2 sing N N 272 EDO C1 H11 sing N N 273 EDO C1 H12 sing N N 274 EDO O1 HO1 sing N N 275 EDO C2 O2 sing N N 276 EDO C2 H21 sing N N 277 EDO C2 H22 sing N N 278 EDO O2 HO2 sing N N 279 GLN N CA sing N N 280 GLN N H sing N N 281 GLN N H2 sing N N 282 GLN CA C sing N N 283 GLN CA CB sing N N 284 GLN CA HA sing N N 285 GLN C O doub N N 286 GLN C OXT sing N N 287 GLN CB CG sing N N 288 GLN CB HB2 sing N N 289 GLN CB HB3 sing N N 290 GLN CG CD sing N N 291 GLN CG HG2 sing N N 292 GLN CG HG3 sing N N 293 GLN CD OE1 doub N N 294 GLN CD NE2 sing N N 295 GLN NE2 HE21 sing N N 296 GLN NE2 HE22 sing N N 297 GLN OXT HXT sing N N 298 GLU N CA sing N N 299 GLU N H sing N N 300 GLU N H2 sing N N 301 GLU CA C sing N N 302 GLU CA CB sing N N 303 GLU CA HA sing N N 304 GLU C O doub N N 305 GLU C OXT sing N N 306 GLU CB CG sing N N 307 GLU CB HB2 sing N N 308 GLU CB HB3 sing N N 309 GLU CG CD sing N N 310 GLU CG HG2 sing N N 311 GLU CG HG3 sing N N 312 GLU CD OE1 doub N N 313 GLU CD OE2 sing N N 314 GLU OE2 HE2 sing N N 315 GLU OXT HXT sing N N 316 GLY N CA sing N N 317 GLY N H sing N N 318 GLY N H2 sing N N 319 GLY CA C sing N N 320 GLY CA HA2 sing N N 321 GLY CA HA3 sing N N 322 GLY C O doub N N 323 GLY C OXT sing N N 324 GLY OXT HXT sing N N 325 HIS N CA sing N N 326 HIS N H sing N N 327 HIS N H2 sing N N 328 HIS CA C sing N N 329 HIS CA CB sing N N 330 HIS CA HA sing N N 331 HIS C O doub N N 332 HIS C OXT sing N N 333 HIS CB CG sing N N 334 HIS CB HB2 sing N N 335 HIS CB HB3 sing N N 336 HIS CG ND1 sing Y N 337 HIS CG CD2 doub Y N 338 HIS ND1 CE1 doub Y N 339 HIS ND1 HD1 sing N N 340 HIS CD2 NE2 sing Y N 341 HIS CD2 HD2 sing N N 342 HIS CE1 NE2 sing Y N 343 HIS CE1 HE1 sing N N 344 HIS NE2 HE2 sing N N 345 HIS OXT HXT sing N N 346 HOH O H1 sing N N 347 HOH O H2 sing N N 348 LEU N CA sing N N 349 LEU N H sing N N 350 LEU N H2 sing N N 351 LEU CA C sing N N 352 LEU CA CB sing N N 353 LEU CA HA sing N N 354 LEU C O doub N N 355 LEU C OXT sing N N 356 LEU CB CG sing N N 357 LEU CB HB2 sing N N 358 LEU CB HB3 sing N N 359 LEU CG CD1 sing N N 360 LEU CG CD2 sing N N 361 LEU CG HG sing N N 362 LEU CD1 HD11 sing N N 363 LEU CD1 HD12 sing N N 364 LEU CD1 HD13 sing N N 365 LEU CD2 HD21 sing N N 366 LEU CD2 HD22 sing N N 367 LEU CD2 HD23 sing N N 368 LEU OXT HXT sing N N 369 LYS N CA sing N N 370 LYS N H sing N N 371 LYS N H2 sing N N 372 LYS CA C sing N N 373 LYS CA CB sing N N 374 LYS CA HA sing N N 375 LYS C O doub N N 376 LYS C OXT sing N N 377 LYS CB CG sing N N 378 LYS CB HB2 sing N N 379 LYS CB HB3 sing N N 380 LYS CG CD sing N N 381 LYS CG HG2 sing N N 382 LYS CG HG3 sing N N 383 LYS CD CE sing N N 384 LYS CD HD2 sing N N 385 LYS CD HD3 sing N N 386 LYS CE NZ sing N N 387 LYS CE HE2 sing N N 388 LYS CE HE3 sing N N 389 LYS NZ HZ1 sing N N 390 LYS NZ HZ2 sing N N 391 LYS NZ HZ3 sing N N 392 LYS OXT HXT sing N N 393 MET N CA sing N N 394 MET N H sing N N 395 MET N H2 sing N N 396 MET CA C sing N N 397 MET CA CB sing N N 398 MET CA HA sing N N 399 MET C O doub N N 400 MET C OXT sing N N 401 MET CB CG sing N N 402 MET CB HB2 sing N N 403 MET CB HB3 sing N N 404 MET CG SD sing N N 405 MET CG HG2 sing N N 406 MET CG HG3 sing N N 407 MET SD CE sing N N 408 MET CE HE1 sing N N 409 MET CE HE2 sing N N 410 MET CE HE3 sing N N 411 MET OXT HXT sing N N 412 PHE N CA sing N N 413 PHE N H sing N N 414 PHE N H2 sing N N 415 PHE CA C sing N N 416 PHE CA CB sing N N 417 PHE CA HA sing N N 418 PHE C O doub N N 419 PHE C OXT sing N N 420 PHE CB CG sing N N 421 PHE CB HB2 sing N N 422 PHE CB HB3 sing N N 423 PHE CG CD1 doub Y N 424 PHE CG CD2 sing Y N 425 PHE CD1 CE1 sing Y N 426 PHE CD1 HD1 sing N N 427 PHE CD2 CE2 doub Y N 428 PHE CD2 HD2 sing N N 429 PHE CE1 CZ doub Y N 430 PHE CE1 HE1 sing N N 431 PHE CE2 CZ sing Y N 432 PHE CE2 HE2 sing N N 433 PHE CZ HZ sing N N 434 PHE OXT HXT sing N N 435 PRO N CA sing N N 436 PRO N CD sing N N 437 PRO N H sing N N 438 PRO CA C sing N N 439 PRO CA CB sing N N 440 PRO CA HA sing N N 441 PRO C O doub N N 442 PRO C OXT sing N N 443 PRO CB CG sing N N 444 PRO CB HB2 sing N N 445 PRO CB HB3 sing N N 446 PRO CG CD sing N N 447 PRO CG HG2 sing N N 448 PRO CG HG3 sing N N 449 PRO CD HD2 sing N N 450 PRO CD HD3 sing N N 451 PRO OXT HXT sing N N 452 SER N CA sing N N 453 SER N H sing N N 454 SER N H2 sing N N 455 SER CA C sing N N 456 SER CA CB sing N N 457 SER CA HA sing N N 458 SER C O doub N N 459 SER C OXT sing N N 460 SER CB OG sing N N 461 SER CB HB2 sing N N 462 SER CB HB3 sing N N 463 SER OG HG sing N N 464 SER OXT HXT sing N N 465 THR N CA sing N N 466 THR N H sing N N 467 THR N H2 sing N N 468 THR CA C sing N N 469 THR CA CB sing N N 470 THR CA HA sing N N 471 THR C O doub N N 472 THR C OXT sing N N 473 THR CB OG1 sing N N 474 THR CB CG2 sing N N 475 THR CB HB sing N N 476 THR OG1 HG1 sing N N 477 THR CG2 HG21 sing N N 478 THR CG2 HG22 sing N N 479 THR CG2 HG23 sing N N 480 THR OXT HXT sing N N 481 TRP N CA sing N N 482 TRP N H sing N N 483 TRP N H2 sing N N 484 TRP CA C sing N N 485 TRP CA CB sing N N 486 TRP CA HA sing N N 487 TRP C O doub N N 488 TRP C OXT sing N N 489 TRP CB CG sing N N 490 TRP CB HB2 sing N N 491 TRP CB HB3 sing N N 492 TRP CG CD1 doub Y N 493 TRP CG CD2 sing Y N 494 TRP CD1 NE1 sing Y N 495 TRP CD1 HD1 sing N N 496 TRP CD2 CE2 doub Y N 497 TRP CD2 CE3 sing Y N 498 TRP NE1 CE2 sing Y N 499 TRP NE1 HE1 sing N N 500 TRP CE2 CZ2 sing Y N 501 TRP CE3 CZ3 doub Y N 502 TRP CE3 HE3 sing N N 503 TRP CZ2 CH2 doub Y N 504 TRP CZ2 HZ2 sing N N 505 TRP CZ3 CH2 sing Y N 506 TRP CZ3 HZ3 sing N N 507 TRP CH2 HH2 sing N N 508 TRP OXT HXT sing N N 509 TYR N CA sing N N 510 TYR N H sing N N 511 TYR N H2 sing N N 512 TYR CA C sing N N 513 TYR CA CB sing N N 514 TYR CA HA sing N N 515 TYR C O doub N N 516 TYR C OXT sing N N 517 TYR CB CG sing N N 518 TYR CB HB2 sing N N 519 TYR CB HB3 sing N N 520 TYR CG CD1 doub Y N 521 TYR CG CD2 sing Y N 522 TYR CD1 CE1 sing Y N 523 TYR CD1 HD1 sing N N 524 TYR CD2 CE2 doub Y N 525 TYR CD2 HD2 sing N N 526 TYR CE1 CZ doub Y N 527 TYR CE1 HE1 sing N N 528 TYR CE2 CZ sing Y N 529 TYR CE2 HE2 sing N N 530 TYR CZ OH sing N N 531 TYR OH HH sing N N 532 TYR OXT HXT sing N N 533 VAL N CA sing N N 534 VAL N H sing N N 535 VAL N H2 sing N N 536 VAL CA C sing N N 537 VAL CA CB sing N N 538 VAL CA HA sing N N 539 VAL C O doub N N 540 VAL C OXT sing N N 541 VAL CB CG1 sing N N 542 VAL CB CG2 sing N N 543 VAL CB HB sing N N 544 VAL CG1 HG11 sing N N 545 VAL CG1 HG12 sing N N 546 VAL CG1 HG13 sing N N 547 VAL CG2 HG21 sing N N 548 VAL CG2 HG22 sing N N 549 VAL CG2 HG23 sing N N 550 VAL OXT HXT sing N N 551 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 4R2P 'double helix' 4R2P 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 B DG 2 1_555 C DC 11 1_555 -0.192 -0.103 0.004 2.034 -3.084 0.020 1 B_DG2:DC61_C B 2 ? C 61 ? 19 1 1 B DC 3 1_555 C DG 10 1_555 0.257 -0.107 -0.502 12.359 -10.923 0.385 2 B_DC3:DG60_C B 3 ? C 60 ? 19 1 1 B DG 4 1_555 C DC 9 1_555 -0.239 -0.200 -0.169 -6.731 -6.369 -1.076 3 B_DG4:DC59_C B 4 ? C 59 ? 19 1 1 B DT 5 1_555 C DA 8 1_555 -0.092 -0.185 -0.007 6.454 -3.794 -0.288 4 B_DT5:DA58_C B 5 ? C 58 ? 20 1 1 B DG 6 1_555 C DC 7 1_555 -0.112 -0.110 0.235 -2.531 -13.798 1.128 5 B_DG6:DC57_C B 6 ? C 57 ? 19 1 1 B DG 7 1_555 C DC 6 1_555 -0.287 -0.224 0.035 -9.851 -14.300 -1.884 6 B_DG7:DC56_C B 7 ? C 56 ? 19 1 1 B DG 8 1_555 C DC 5 1_555 -0.026 -0.234 -0.130 -0.411 -15.340 -0.920 7 B_DG8:DC55_C B 8 ? C 55 ? 19 1 1 B DT 11 1_555 C DA 2 1_555 -0.074 -0.245 -0.185 13.615 -13.268 5.315 8 B_DT11:DA52_C B 11 ? C 52 ? 20 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 B DG 2 1_555 C DC 11 1_555 B DC 3 1_555 C DG 10 1_555 0.242 -0.231 3.039 5.104 2.659 26.550 -1.117 0.684 2.995 5.705 -10.951 27.155 1 BB_DG2DC3:DG60DC61_CC B 2 ? C 61 ? B 3 ? C 60 ? 1 B DC 3 1_555 C DG 10 1_555 B DG 4 1_555 C DC 9 1_555 -1.004 -0.223 3.697 -8.335 10.457 36.906 -1.782 0.342 3.639 15.892 12.667 39.174 2 BB_DC3DG4:DC59DG60_CC B 3 ? C 60 ? B 4 ? C 59 ? 1 B DG 4 1_555 C DC 9 1_555 B DT 5 1_555 C DA 8 1_555 0.349 -0.408 3.098 -1.696 5.906 28.072 -2.059 -1.060 2.927 11.993 3.445 28.724 3 BB_DG4DT5:DA58DC59_CC B 4 ? C 59 ? B 5 ? C 58 ? 1 B DT 5 1_555 C DA 8 1_555 B DG 6 1_555 C DC 7 1_555 -1.041 -0.427 3.538 -6.469 -3.129 33.667 -0.176 0.633 3.692 -5.327 11.013 34.404 4 BB_DT5DG6:DC57DA58_CC B 5 ? C 58 ? B 6 ? C 57 ? 1 B DG 6 1_555 C DC 7 1_555 B DG 7 1_555 C DC 6 1_555 -0.370 -1.199 3.469 1.231 3.165 35.978 -2.400 0.777 3.341 5.109 -1.987 36.133 5 BB_DG6DG7:DC56DC57_CC B 6 ? C 57 ? B 7 ? C 56 ? 1 B DG 7 1_555 C DC 6 1_555 B DG 8 1_555 C DC 5 1_555 0.043 -0.205 3.213 1.345 9.269 35.083 -1.597 0.115 3.061 15.047 -2.183 36.274 6 BB_DG7DG8:DC55DC56_CC B 7 ? C 56 ? B 8 ? C 55 ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 4 'ZINC ION' ZN 5 1,2-ETHANEDIOL EDO 6 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 4R2E _pdbx_initial_refinement_model.details 'PDB ENTRY 4R2E' #