HEADER HYDROLASE/HYDROLASE INHIBITOR 22-AUG-14 4R5V TITLE STRUCTURE OF THE M1 ALANYLAMINOPEPTIDASE FROM MALARIA COMPLEXED WITH A TITLE 2 HYDROXAMIC ACID-BASED INHIBITOR COMPND MOL_ID: 1; COMPND 2 MOLECULE: M1 FAMILY AMINOPEPTIDASE; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 195-1084; COMPND 5 SYNONYM: PFA-M1; COMPND 6 EC: 3.4.11.-; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PLASMODIUM FALCIPARUM FCB1/COLUMBIA; SOURCE 3 ORGANISM_TAXID: 186763; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PTRCHIS-2B KEYWDS PROTEASE, HYDROLASE-HYDROLASE INHIBITOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR N.DRINKWATER,S.MCGOWAN REVDAT 3 20-SEP-23 4R5V 1 REMARK SEQADV LINK REVDAT 2 26-NOV-14 4R5V 1 JRNL REVDAT 1 29-OCT-14 4R5V 0 JRNL AUTH S.N.MISTRY,N.DRINKWATER,C.RUGGERI,K.K.SIVARAMAN, JRNL AUTH 2 S.LOGANATHAN,S.FLETCHER,M.DRAG,A.PAIARDINI,V.M.AVERY, JRNL AUTH 3 P.J.SCAMMELLS,S.MCGOWAN JRNL TITL TWO-PRONGED ATTACK: DUAL INHIBITION OF PLASMODIUM FALCIPARUM JRNL TITL 2 M1 AND M17 METALLOAMINOPEPTIDASES BY A NOVEL SERIES OF JRNL TITL 3 HYDROXAMIC ACID-BASED INHIBITORS. JRNL REF J.MED.CHEM. V. 57 9168 2014 JRNL REFN ISSN 0022-2623 JRNL PMID 25299353 JRNL DOI 10.1021/JM501323A REMARK 2 REMARK 2 RESOLUTION. 2.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.8.4_1496 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : MLHL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.51 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.910 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 3 NUMBER OF REFLECTIONS : 57571 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.183 REMARK 3 R VALUE (WORKING SET) : 0.181 REMARK 3 FREE R VALUE : 0.222 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.060 REMARK 3 FREE R VALUE TEST SET COUNT : 2915 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 30.5159 - 5.7812 1.00 2781 167 0.1633 0.1820 REMARK 3 2 5.7812 - 4.5938 1.00 2701 150 0.1467 0.1835 REMARK 3 3 4.5938 - 4.0146 1.00 2675 127 0.1411 0.1948 REMARK 3 4 4.0146 - 3.6482 1.00 2637 147 0.1531 0.1863 REMARK 3 5 3.6482 - 3.3870 1.00 2640 124 0.1598 0.1844 REMARK 3 6 3.3870 - 3.1876 1.00 2622 143 0.1705 0.2160 REMARK 3 7 3.1876 - 3.0281 1.00 2604 128 0.1891 0.2035 REMARK 3 8 3.0281 - 2.8964 1.00 2593 139 0.1851 0.2786 REMARK 3 9 2.8964 - 2.7849 0.99 2602 146 0.1982 0.2623 REMARK 3 10 2.7849 - 2.6889 0.99 2584 139 0.1989 0.2531 REMARK 3 11 2.6889 - 2.6049 0.99 2585 129 0.1967 0.2312 REMARK 3 12 2.6049 - 2.5305 0.99 2598 146 0.2058 0.2238 REMARK 3 13 2.5305 - 2.4639 0.99 2559 144 0.2066 0.2624 REMARK 3 14 2.4639 - 2.4038 0.99 2573 119 0.2145 0.2843 REMARK 3 15 2.4038 - 2.3492 1.00 2572 133 0.2193 0.2355 REMARK 3 16 2.3492 - 2.2992 0.99 2580 141 0.2170 0.2877 REMARK 3 17 2.2992 - 2.2532 0.98 2540 138 0.2272 0.2732 REMARK 3 18 2.2532 - 2.2107 1.00 2607 116 0.2306 0.2838 REMARK 3 19 2.2107 - 2.1712 0.98 2525 144 0.2297 0.3201 REMARK 3 20 2.1712 - 2.1344 0.99 2547 148 0.2427 0.2742 REMARK 3 21 2.1344 - 2.1000 0.99 2531 147 0.2518 0.2681 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.240 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 20.780 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 25.66 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 31.91 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.003 7493 REMARK 3 ANGLE : 0.737 10162 REMARK 3 CHIRALITY : 0.031 1123 REMARK 3 PLANARITY : 0.003 1299 REMARK 3 DIHEDRAL : 13.681 2818 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ALL REMARK 3 ORIGIN FOR THE GROUP (A): 17.6033 3.8310 10.2029 REMARK 3 T TENSOR REMARK 3 T11: 0.1475 T22: 0.1711 REMARK 3 T33: 0.1446 T12: 0.0023 REMARK 3 T13: 0.0159 T23: 0.0166 REMARK 3 L TENSOR REMARK 3 L11: 0.5201 L22: 1.3881 REMARK 3 L33: 0.9325 L12: -0.2313 REMARK 3 L13: 0.0469 L23: 0.4024 REMARK 3 S TENSOR REMARK 3 S11: -0.0895 S12: -0.0477 S13: 0.0471 REMARK 3 S21: 0.0402 S22: 0.0339 S23: 0.0290 REMARK 3 S31: -0.1256 S32: -0.0127 S33: 0.0538 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4R5V COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 03-SEP-14. REMARK 100 THE DEPOSITION ID IS D_1000086937. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 13-MAR-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : AUSTRALIAN SYNCHROTRON REMARK 200 BEAMLINE : MX1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9537 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL SILICON 111 REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.2.4, SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 57652 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.100 REMARK 200 RESOLUTION RANGE LOW (A) : 46.590 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 200 DATA REDUNDANCY : 11.20 REMARK 200 R MERGE (I) : 0.20100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.16 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.9 REMARK 200 DATA REDUNDANCY IN SHELL : 11.40 REMARK 200 R MERGE FOR SHELL (I) : 0.01300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 3EBG REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.47 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.34 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 22% (V/V) PEG 8000, 10* (V/V) REMARK 280 GLYCEROL, 0.1 M TRIS PH 8.5, 0.2 M MGCL2, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 37.61100 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 59.34900 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 54.79650 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 59.34900 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 37.61100 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 54.79650 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: BIOLOGICAL UNIT IS THE SAME AS ASYM. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 HIS A 190 REMARK 465 HIS A 191 REMARK 465 HIS A 192 REMARK 465 HIS A 193 REMARK 465 HIS A 194 REMARK 465 HIS A 195 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 202 CD CE NZ REMARK 470 LYS A 205 CG CD CE NZ REMARK 470 ASP A 222 CG OD1 OD2 REMARK 470 ARG A 228 CD NE CZ NH1 NH2 REMARK 470 LYS A 252 CD CE NZ REMARK 470 GLU A 267 CG CD OE1 OE2 REMARK 470 LYS A 287 CE NZ REMARK 470 GLU A 299 CD OE1 OE2 REMARK 470 GLU A 348 CG CD OE1 OE2 REMARK 470 LYS A 480 CD CE NZ REMARK 470 GLU A 572 CG CD OE1 OE2 REMARK 470 GLU A 597 CG CD OE1 OE2 REMARK 470 LYS A 608 CG CD CE NZ REMARK 470 GLU A 663 CG CD OE1 OE2 REMARK 470 LYS A 682 CG CD CE NZ REMARK 470 GLU A 683 CG CD OE1 OE2 REMARK 470 GLU A 699 CD OE1 OE2 REMARK 470 HIS A 815 CG ND1 CD2 CE1 NE2 REMARK 470 GLU A 884 CG CD OE1 OE2 REMARK 470 LYS A 973 CG CD CE NZ REMARK 470 GLU A 977 CD OE1 OE2 REMARK 470 LYS A 980 CD CE NZ REMARK 470 LYS A1019 CD CE NZ REMARK 470 LYS A1084 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD1 ASN A 835 O HOH A 1759 1.60 REMARK 500 ND2 ASN A 573 OE1 GLU A 1076 1.98 REMARK 500 OE2 GLU A 265 O HOH A 1769 2.08 REMARK 500 O HOH A 1740 O HOH A 1741 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 255 139.91 -174.54 REMARK 500 GLU A 274 -39.55 -135.10 REMARK 500 LYS A 311 -107.11 57.00 REMARK 500 ASP A 331 75.36 -69.53 REMARK 500 VAL A 459 -157.39 -126.95 REMARK 500 LYS A 465 93.60 -37.72 REMARK 500 LEU A 475 -35.51 -137.51 REMARK 500 SER A 549 -69.43 -96.40 REMARK 500 ASN A 700 -4.65 -145.16 REMARK 500 PHE A 736 74.66 53.89 REMARK 500 ASP A 974 33.96 -99.44 REMARK 500 VAL A 986 -57.86 -124.79 REMARK 500 LYS A 988 -129.21 56.39 REMARK 500 HIS A1011 31.77 -91.25 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A1101 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 496 NE2 REMARK 620 2 HIS A 500 NE2 98.6 REMARK 620 3 GLU A 519 OE1 105.0 108.6 REMARK 620 4 R5V A1102 O 108.3 145.0 86.0 REMARK 620 5 R5V A1102 OAL 99.5 83.8 150.1 70.2 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 1101 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE R5V A 1102 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 1103 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 1104 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 1105 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3EBG RELATED DB: PDB REMARK 900 UNLIGANDED FORM OF ENZYME REMARK 900 RELATED ID: 4R5T RELATED DB: PDB REMARK 900 RELATED ID: 4R5X RELATED DB: PDB REMARK 900 RELATED ID: 4R6T RELATED DB: PDB REMARK 900 RELATED ID: 4R76 RELATED DB: PDB REMARK 900 RELATED ID: 4R7M RELATED DB: PDB DBREF 4R5V A 196 1084 UNP O96935 AMP1_PLAFQ 196 1084 SEQADV 4R5V HIS A 190 UNP O96935 EXPRESSION TAG SEQADV 4R5V HIS A 191 UNP O96935 EXPRESSION TAG SEQADV 4R5V HIS A 192 UNP O96935 EXPRESSION TAG SEQADV 4R5V HIS A 193 UNP O96935 EXPRESSION TAG SEQADV 4R5V HIS A 194 UNP O96935 EXPRESSION TAG SEQADV 4R5V HIS A 195 UNP O96935 EXPRESSION TAG SEQADV 4R5V GLN A 213 UNP O96935 ASN 213 ENGINEERED MUTATION SEQADV 4R5V GLN A 223 UNP O96935 ASN 223 ENGINEERED MUTATION SEQADV 4R5V PRO A 378 UNP O96935 HIS 378 ENGINEERED MUTATION SEQADV 4R5V GLN A 501 UNP O96935 ASN 501 ENGINEERED MUTATION SEQADV 4R5V GLN A 745 UNP O96935 ASN 745 ENGINEERED MUTATION SEQADV 4R5V GLN A 795 UNP O96935 ASN 795 ENGINEERED MUTATION SEQADV 4R5V GLN A 1069 UNP O96935 ASN 1069 ENGINEERED MUTATION SEQRES 1 A 895 HIS HIS HIS HIS HIS HIS PRO LYS ILE HIS TYR ARG LYS SEQRES 2 A 895 ASP TYR LYS PRO SER GLY PHE ILE ILE ASN GLN VAL THR SEQRES 3 A 895 LEU ASN ILE ASN ILE HIS ASP GLN GLU THR ILE VAL ARG SEQRES 4 A 895 SER VAL LEU ASP MET ASP ILE SER LYS HIS ASN VAL GLY SEQRES 5 A 895 GLU ASP LEU VAL PHE ASP GLY VAL GLY LEU LYS ILE ASN SEQRES 6 A 895 GLU ILE SER ILE ASN ASN LYS LYS LEU VAL GLU GLY GLU SEQRES 7 A 895 GLU TYR THR TYR ASP ASN GLU PHE LEU THR ILE PHE SER SEQRES 8 A 895 LYS PHE VAL PRO LYS SER LYS PHE ALA PHE SER SER GLU SEQRES 9 A 895 VAL ILE ILE HIS PRO GLU THR ASN TYR ALA LEU THR GLY SEQRES 10 A 895 LEU TYR LYS SER LYS ASN ILE ILE VAL SER GLN CYS GLU SEQRES 11 A 895 ALA THR GLY PHE ARG ARG ILE THR PHE PHE ILE ASP ARG SEQRES 12 A 895 PRO ASP MET MET ALA LYS TYR ASP VAL THR VAL THR ALA SEQRES 13 A 895 ASP LYS GLU LYS TYR PRO VAL LEU LEU SER ASN GLY ASP SEQRES 14 A 895 LYS VAL ASN GLU PHE GLU ILE PRO GLY GLY ARG HIS GLY SEQRES 15 A 895 ALA ARG PHE ASN ASP PRO PRO LEU LYS PRO CYS TYR LEU SEQRES 16 A 895 PHE ALA VAL VAL ALA GLY ASP LEU LYS HIS LEU SER ALA SEQRES 17 A 895 THR TYR ILE THR LYS TYR THR LYS LYS LYS VAL GLU LEU SEQRES 18 A 895 TYR VAL PHE SER GLU GLU LYS TYR VAL SER LYS LEU GLN SEQRES 19 A 895 TRP ALA LEU GLU CYS LEU LYS LYS SER MET ALA PHE ASP SEQRES 20 A 895 GLU ASP TYR PHE GLY LEU GLU TYR ASP LEU SER ARG LEU SEQRES 21 A 895 ASN LEU VAL ALA VAL SER ASP PHE ASN VAL GLY ALA MET SEQRES 22 A 895 GLU ASN LYS GLY LEU ASN ILE PHE ASN ALA ASN SER LEU SEQRES 23 A 895 LEU ALA SER LYS LYS ASN SER ILE ASP PHE SER TYR ALA SEQRES 24 A 895 ARG ILE LEU THR VAL VAL GLY HIS GLU TYR PHE HIS GLN SEQRES 25 A 895 TYR THR GLY ASN ARG VAL THR LEU ARG ASP TRP PHE GLN SEQRES 26 A 895 LEU THR LEU LYS GLU GLY LEU THR VAL HIS ARG GLU ASN SEQRES 27 A 895 LEU PHE SER GLU GLU MET THR LYS THR VAL THR THR ARG SEQRES 28 A 895 LEU SER HIS VAL ASP LEU LEU ARG SER VAL GLN PHE LEU SEQRES 29 A 895 GLU ASP SER SER PRO LEU SER HIS PRO ILE ARG PRO GLU SEQRES 30 A 895 SER TYR VAL SER MET GLU ASN PHE TYR THR THR THR VAL SEQRES 31 A 895 TYR ASP LYS GLY SER GLU VAL MET ARG MET TYR LEU THR SEQRES 32 A 895 ILE LEU GLY GLU GLU TYR TYR LYS LYS GLY PHE ASP ILE SEQRES 33 A 895 TYR ILE LYS LYS ASN ASP GLY ASN THR ALA THR CYS GLU SEQRES 34 A 895 ASP PHE ASN TYR ALA MET GLU GLN ALA TYR LYS MET LYS SEQRES 35 A 895 LYS ALA ASP ASN SER ALA ASN LEU ASN GLN TYR LEU LEU SEQRES 36 A 895 TRP PHE SER GLN SER GLY THR PRO HIS VAL SER PHE LYS SEQRES 37 A 895 TYR ASN TYR ASP ALA GLU LYS LYS GLN TYR SER ILE HIS SEQRES 38 A 895 VAL ASN GLN TYR THR LYS PRO ASP GLU ASN GLN LYS GLU SEQRES 39 A 895 LYS LYS PRO LEU PHE ILE PRO ILE SER VAL GLY LEU ILE SEQRES 40 A 895 ASN PRO GLU ASN GLY LYS GLU MET ILE SER GLN THR THR SEQRES 41 A 895 LEU GLU LEU THR LYS GLU SER ASP THR PHE VAL PHE ASN SEQRES 42 A 895 ASN ILE ALA VAL LYS PRO ILE PRO SER LEU PHE ARG GLY SEQRES 43 A 895 PHE SER ALA PRO VAL TYR ILE GLU ASP GLN LEU THR ASP SEQRES 44 A 895 GLU GLU ARG ILE LEU LEU LEU LYS TYR ASP SER ASP ALA SEQRES 45 A 895 PHE VAL ARG TYR ASN SER CYS THR ASN ILE TYR MET LYS SEQRES 46 A 895 GLN ILE LEU MET ASN TYR ASN GLU PHE LEU LYS ALA LYS SEQRES 47 A 895 ASN GLU LYS LEU GLU SER PHE GLN LEU THR PRO VAL ASN SEQRES 48 A 895 ALA GLN PHE ILE ASP ALA ILE LYS TYR LEU LEU GLU ASP SEQRES 49 A 895 PRO HIS ALA ASP ALA GLY PHE LYS SER TYR ILE VAL SER SEQRES 50 A 895 LEU PRO GLN ASP ARG TYR ILE ILE ASN PHE VAL SER ASN SEQRES 51 A 895 LEU ASP THR ASP VAL LEU ALA ASP THR LYS GLU TYR ILE SEQRES 52 A 895 TYR LYS GLN ILE GLY ASP LYS LEU ASN ASP VAL TYR TYR SEQRES 53 A 895 LYS MET PHE LYS SER LEU GLU ALA LYS ALA ASP ASP LEU SEQRES 54 A 895 THR TYR PHE ASN ASP GLU SER HIS VAL ASP PHE ASP GLN SEQRES 55 A 895 MET ASN MET ARG THR LEU ARG ASN THR LEU LEU SER LEU SEQRES 56 A 895 LEU SER LYS ALA GLN TYR PRO ASN ILE LEU ASN GLU ILE SEQRES 57 A 895 ILE GLU HIS SER LYS SER PRO TYR PRO SER ASN TRP LEU SEQRES 58 A 895 THR SER LEU SER VAL SER ALA TYR PHE ASP LYS TYR PHE SEQRES 59 A 895 GLU LEU TYR ASP LYS THR TYR LYS LEU SER LYS ASP ASP SEQRES 60 A 895 GLU LEU LEU LEU GLN GLU TRP LEU LYS THR VAL SER ARG SEQRES 61 A 895 SER ASP ARG LYS ASP ILE TYR GLU ILE LEU LYS LYS LEU SEQRES 62 A 895 GLU ASN GLU VAL LEU LYS ASP SER LYS ASN PRO ASN ASP SEQRES 63 A 895 ILE ARG ALA VAL TYR LEU PRO PHE THR ASN ASN LEU ARG SEQRES 64 A 895 ARG PHE HIS ASP ILE SER GLY LYS GLY TYR LYS LEU ILE SEQRES 65 A 895 ALA GLU VAL ILE THR LYS THR ASP LYS PHE ASN PRO MET SEQRES 66 A 895 VAL ALA THR GLN LEU CYS GLU PRO PHE LYS LEU TRP ASN SEQRES 67 A 895 LYS LEU ASP THR LYS ARG GLN GLU LEU MET LEU ASN GLU SEQRES 68 A 895 MET ASN THR MET LEU GLN GLU PRO GLN ILE SER ASN ASN SEQRES 69 A 895 LEU LYS GLU TYR LEU LEU ARG LEU THR ASN LYS HET ZN A1101 1 HET R5V A1102 23 HET GOL A1103 6 HET GOL A1104 6 HET GOL A1105 6 HETNAM ZN ZINC ION HETNAM R5V N-{(1R)-2-(HYDROXYAMINO)-2-OXO-1-[4-(1H-PYRAZOL-1-YL) HETNAM 2 R5V PHENYL]ETHYL}-2,2-DIMETHYLPROPANAMIDE HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 ZN ZN 2+ FORMUL 3 R5V C16 H20 N4 O3 FORMUL 4 GOL 3(C3 H8 O3) FORMUL 7 HOH *569(H2 O) HELIX 1 1 LYS A 202 TYR A 204 5 3 HELIX 2 2 SER A 280 VAL A 283 5 4 HELIX 3 3 HIS A 297 ASN A 301 5 5 HELIX 4 4 GLY A 322 ILE A 326 5 5 HELIX 5 5 PRO A 381 PHE A 385 5 5 HELIX 6 6 LYS A 417 LYS A 421 5 5 HELIX 7 7 LEU A 422 TYR A 439 1 18 HELIX 8 8 ASN A 473 LEU A 475 5 3 HELIX 9 9 ASP A 484 ASN A 505 1 22 HELIX 10 10 ASP A 511 PHE A 513 5 3 HELIX 11 11 GLN A 514 LYS A 535 1 22 HELIX 12 12 VAL A 537 SER A 556 1 20 HELIX 13 13 SER A 570 PHE A 574 5 5 HELIX 14 14 THR A 576 ASN A 610 1 35 HELIX 15 15 THR A 616 ALA A 633 1 18 HELIX 16 16 ASN A 640 TYR A 642 5 3 HELIX 17 17 LEU A 643 GLN A 648 1 6 HELIX 18 18 THR A 747 ASP A 758 1 12 HELIX 19 19 ASP A 760 GLU A 789 1 30 HELIX 20 20 ASN A 800 GLU A 812 1 13 HELIX 21 21 ASP A 817 VAL A 825 1 9 HELIX 22 22 GLN A 829 ILE A 834 1 6 HELIX 23 23 ASN A 835 VAL A 837 5 3 HELIX 24 24 ASP A 841 LEU A 871 1 31 HELIX 25 25 LEU A 871 ASP A 876 1 6 HELIX 26 26 ASP A 888 ALA A 908 1 21 HELIX 27 27 ASN A 912 SER A 921 1 10 HELIX 28 28 TYR A 925 SER A 936 1 12 HELIX 29 29 ALA A 937 PHE A 939 5 3 HELIX 30 30 LYS A 941 LYS A 954 1 14 HELIX 31 31 ASP A 956 SER A 970 1 15 HELIX 32 32 ASP A 974 VAL A 986 1 13 HELIX 33 33 ASN A 992 LEU A 1001 1 10 HELIX 34 34 PRO A 1002 ASN A 1006 5 5 HELIX 35 35 GLY A 1015 LYS A 1030 1 16 HELIX 36 36 ASN A 1032 LEU A 1039 1 8 HELIX 37 37 CYS A 1040 LEU A 1049 5 10 HELIX 38 38 ASP A 1050 GLN A 1066 1 17 HELIX 39 39 SER A 1071 THR A 1082 1 12 SHEET 1 A 2 HIS A 199 TYR A 200 0 SHEET 2 A 2 SER A 567 TYR A 568 -1 O TYR A 568 N HIS A 199 SHEET 1 B 8 LYS A 261 LYS A 262 0 SHEET 2 B 8 LYS A 252 ILE A 258 -1 N ILE A 258 O LYS A 261 SHEET 3 B 8 PHE A 288 ILE A 296 -1 O GLU A 293 N ASN A 254 SHEET 4 B 8 THR A 225 ILE A 235 -1 N LEU A 231 O PHE A 290 SHEET 5 B 8 PHE A 209 ILE A 220 -1 N ASN A 219 O ILE A 226 SHEET 6 B 8 ALA A 337 ASP A 346 1 O THR A 342 N ILE A 218 SHEET 7 B 8 ARG A 369 LYS A 380 -1 O PHE A 374 N VAL A 341 SHEET 8 B 8 ASP A 358 ILE A 365 -1 N ILE A 365 O ARG A 369 SHEET 1 C 3 LEU A 244 ASP A 247 0 SHEET 2 C 3 PHE A 275 ILE A 278 -1 O LEU A 276 N PHE A 246 SHEET 3 C 3 TYR A 269 TYR A 271 -1 N THR A 270 O THR A 277 SHEET 1 D 4 GLY A 306 SER A 310 0 SHEET 2 D 4 ILE A 313 GLN A 317 -1 O ILE A 313 N SER A 310 SHEET 3 D 4 VAL A 387 GLY A 390 -1 O ALA A 389 N ILE A 314 SHEET 4 D 4 VAL A 352 SER A 355 -1 N LEU A 354 O VAL A 388 SHEET 1 E 5 LEU A 392 ILE A 400 0 SHEET 2 E 5 LYS A 407 GLU A 415 -1 O VAL A 408 N TYR A 399 SHEET 3 E 5 ARG A 448 VAL A 454 1 O LEU A 451 N PHE A 413 SHEET 4 E 5 LEU A 467 ASN A 471 1 O PHE A 470 N VAL A 452 SHEET 5 E 5 ALA A 461 MET A 462 -1 N MET A 462 O ILE A 469 SHEET 1 F 2 VAL A 507 LEU A 509 0 SHEET 2 F 2 ASN A 613 ALA A 615 1 O ALA A 615 N THR A 508 SHEET 1 G 4 SER A 716 PHE A 721 0 SHEET 2 G 4 GLN A 666 TYR A 674 -1 N TYR A 667 O PHE A 721 SHEET 3 G 4 HIS A 653 ASP A 661 -1 N HIS A 653 O TYR A 674 SHEET 4 G 4 TYR A 741 GLU A 743 1 O TYR A 741 N VAL A 654 SHEET 1 H 3 THR A 708 LEU A 712 0 SHEET 2 H 3 ILE A 689 ILE A 696 -1 N ILE A 691 O LEU A 710 SHEET 3 H 3 ILE A 729 LEU A 732 -1 O SER A 731 N GLY A 694 LINK NE2 HIS A 496 ZN ZN A1101 1555 1555 2.09 LINK NE2 HIS A 500 ZN ZN A1101 1555 1555 2.06 LINK OE1 GLU A 519 ZN ZN A1101 1555 1555 2.06 LINK ZN ZN A1101 O R5V A1102 1555 1555 2.10 LINK ZN ZN A1101 OAL R5V A1102 1555 1555 2.58 CISPEP 1 GLU A 319 ALA A 320 0 2.52 SITE 1 AC1 4 HIS A 496 HIS A 500 GLU A 519 R5V A1102 SITE 1 AC2 16 VAL A 459 GLY A 460 ALA A 461 MET A 462 SITE 2 AC2 16 GLU A 463 ARG A 489 HIS A 496 GLU A 497 SITE 3 AC2 16 HIS A 500 GLU A 519 GLU A 572 TYR A 575 SITE 4 AC2 16 TYR A 580 ZN A1101 GOL A1105 HOH A1358 SITE 1 AC3 8 VAL A 459 GLY A 460 ASN A 471 ASN A 473 SITE 2 AC3 8 SER A 474 ARG A 489 ARG A 997 HOH A1215 SITE 1 AC4 5 ASN A 573 TYR A 575 THR A 576 THR A1037 SITE 2 AC4 5 HOH A1298 SITE 1 AC5 8 TYR A 575 THR A 576 THR A 577 TYR A 580 SITE 2 AC5 8 ASP A 581 R5V A1102 HOH A1449 HOH A1699 CRYST1 75.222 109.593 118.698 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013294 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009125 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008425 0.00000