HEADER DNA 26-AUG-14 4R6M TITLE CRYSTAL STRUCTURE OF DNA DUPLEX CONTAINING TWO CONSECUTIVE MERCURY- TITLE 2 MEDIATED BASE PAIRS COMPND MOL_ID: 1; COMPND 2 MOLECULE: DNA (5'-D(P*GP*GP*AP*CP*TP*TP*CP*GP*CP*G)-3'); COMPND 3 CHAIN: A, C, E; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: DNA (5'-D(P*CP*GP*CP*GP*TP*TP*GP*TP*CP*C)-3'); COMPND 7 CHAIN: B, D, F; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES; SOURCE 3 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 4 ORGANISM_TAXID: 32630; SOURCE 5 MOL_ID: 2; SOURCE 6 SYNTHETIC: YES; SOURCE 7 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 8 ORGANISM_TAXID: 32630 KEYWDS B DOUBLE HELIX, METALLO DNA DUPLEX, DNA EXPDTA X-RAY DIFFRACTION AUTHOR C.Y.XU,F.YU,L.H.WANG,Y.ZHAO,T.LIN,C.H.FAN,J.H.HE REVDAT 2 20-MAR-24 4R6M 1 REMARK LINK REVDAT 1 02-SEP-15 4R6M 0 JRNL AUTH C.Y.XU,F.YU,L.H.WANG,Y.ZHAO,T.LIN,C.H.FAN,J.H.HE JRNL TITL CRYSTAL STRUCTURE OF DNA DUPLEX CONTAINING TWO CONSECUTIVE JRNL TITL 2 MERCURY-MEDIATED BASE PAIRS JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.36 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.8.4_1496) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.36 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 26.66 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.960 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.6 REMARK 3 NUMBER OF REFLECTIONS : 16263 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.217 REMARK 3 R VALUE (WORKING SET) : 0.216 REMARK 3 FREE R VALUE : 0.241 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.640 REMARK 3 FREE R VALUE TEST SET COUNT : 754 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 26.6600 - 4.0273 0.98 3139 142 0.1791 0.1883 REMARK 3 2 4.0273 - 3.1983 1.00 3150 154 0.2165 0.2465 REMARK 3 3 3.1983 - 2.7945 1.00 3202 158 0.2549 0.3225 REMARK 3 4 2.7945 - 2.5392 1.00 3176 130 0.2957 0.3227 REMARK 3 5 2.5392 - 2.3574 0.91 2842 170 0.3446 0.3848 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.360 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 33.540 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 76.86 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.004 1362 REMARK 3 ANGLE : 0.585 2088 REMARK 3 CHIRALITY : 0.024 240 REMARK 3 PLANARITY : 0.002 60 REMARK 3 DIHEDRAL : 33.411 582 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: THE ENTRY CONTAINS FRIEDEL PAIRS IN REMARK 3 F_PLUS/MINUS COLUMNS REMARK 4 REMARK 4 4R6M COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 04-SEP-14. REMARK 100 THE DEPOSITION ID IS D_1000086964. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 13-JAN-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.75 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL17U REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.00928 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 16444 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.357 REMARK 200 RESOLUTION RANGE LOW (A) : 36.010 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.6 REMARK 200 DATA REDUNDANCY : 10.10 REMARK 200 R MERGE (I) : 0.08400 REMARK 200 R SYM (I) : 0.09300 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SHELXS REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: THE ENTRY CONTAINS FRIEDEL PAIRS IN F_PLUS/MINUS COLUMNS REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 56.98 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.86 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.08 M POTASSIUM CHLORIDE, 0.02 M REMARK 280 MAGNESIUM CHLORIDE, 0.012 M SPERMINE TETRAHYDROCHLORIDE, 40% 2- REMARK 280 METHYL-2,4-PENTANEDIOL, 0.04 M SODIUM CACODYLATE TRIHYDRATE, PH REMARK 280 6.75, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: H 3 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 X+2/3,Y+1/3,Z+1/3 REMARK 290 5555 -Y+2/3,X-Y+1/3,Z+1/3 REMARK 290 6555 -X+Y+2/3,-X+1/3,Z+1/3 REMARK 290 7555 X+1/3,Y+2/3,Z+2/3 REMARK 290 8555 -Y+1/3,X-Y+2/3,Z+2/3 REMARK 290 9555 -X+Y+1/3,-X+2/3,Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 35.39250 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 20.43387 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 36.01233 REMARK 290 SMTRY1 5 -0.500000 -0.866025 0.000000 35.39250 REMARK 290 SMTRY2 5 0.866025 -0.500000 0.000000 20.43387 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 36.01233 REMARK 290 SMTRY1 6 -0.500000 0.866025 0.000000 35.39250 REMARK 290 SMTRY2 6 -0.866025 -0.500000 0.000000 20.43387 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 36.01233 REMARK 290 SMTRY1 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 40.86774 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 72.02467 REMARK 290 SMTRY1 8 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 8 0.866025 -0.500000 0.000000 40.86774 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 72.02467 REMARK 290 SMTRY1 9 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 -0.500000 0.000000 40.86774 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 72.02467 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1190 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 3980 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -65.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1300 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 3880 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -65.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1200 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 4010 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -69.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: E, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 DC B 1 P OP1 OP2 REMARK 480 DG C 1 P OP1 OP2 O5' REMARK 480 DC D 1 P OP1 OP2 O5' C5' REMARK 480 DG E 1 P OP1 OP2 REMARK 480 DC F 1 P OP1 OP2 O5' REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH F 202 O HOH F 203 1.99 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 DA E 3 O4' - C1' - N9 ANGL. DEV. = 2.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HG B 101 HG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 DT A 5 N3 REMARK 620 2 DT A 5 O2 52.4 REMARK 620 3 DT B 6 N3 171.6 119.5 REMARK 620 4 DT B 6 O2 126.9 84.9 49.4 REMARK 620 5 DG B 7 O6 99.4 77.5 75.2 100.0 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HG B 102 HG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 DT A 6 N3 REMARK 620 2 DT A 6 O4 52.5 REMARK 620 3 DG B 4 O6 95.6 61.8 REMARK 620 4 DT B 5 N3 171.8 119.4 77.9 REMARK 620 5 DT B 5 O2 134.6 159.9 98.2 52.3 REMARK 620 6 DT B 6 O2 95.5 115.4 161.9 89.6 84.0 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HG D 102 HG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 DT C 5 N3 REMARK 620 2 DT C 5 O2 47.1 REMARK 620 3 DT C 5 O4 47.0 94.1 REMARK 620 4 DT D 6 N3 158.9 113.0 151.7 REMARK 620 5 DT D 6 O4 148.3 134.1 117.7 47.6 REMARK 620 6 DT D 6 O2 116.3 81.8 137.9 45.3 92.9 REMARK 620 7 DG D 7 O6 97.5 74.9 116.2 80.4 62.0 103.1 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HG D 101 HG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 DT C 6 N3 REMARK 620 2 DT C 6 O4 58.1 REMARK 620 3 DG D 4 O6 105.2 73.8 REMARK 620 4 DT D 5 N3 162.4 137.6 77.7 REMARK 620 5 DT D 5 O4 151.0 93.9 70.3 46.5 REMARK 620 6 DT D 6 O2 86.8 125.3 160.8 86.5 106.4 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HG E 101 HG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 DT E 5 N3 REMARK 620 2 DT E 5 O4 48.9 REMARK 620 3 HOH E 201 O 91.1 52.5 REMARK 620 4 DT F 6 O2 134.5 162.0 133.5 REMARK 620 5 DT F 6 N3 163.0 123.8 75.3 58.2 REMARK 620 6 HOH F 201 O 83.5 50.6 76.2 111.8 102.7 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HG F 101 HG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 DT E 6 N3 REMARK 620 2 DT E 6 O4 50.4 REMARK 620 3 DG F 4 O6 98.1 67.4 REMARK 620 4 DT F 5 N3 175.5 127.3 83.6 REMARK 620 5 DT F 5 O2 131.6 166.8 100.0 51.8 REMARK 620 6 HOH F 201 O 99.9 50.4 60.9 77.2 128.1 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HG B 101 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HG B 102 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HG D 101 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HG D 102 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HG E 101 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HG F 101 DBREF 4R6M A 1 10 PDB 4R6M 4R6M 1 10 DBREF 4R6M C 1 10 PDB 4R6M 4R6M 1 10 DBREF 4R6M E 1 10 PDB 4R6M 4R6M 1 10 DBREF 4R6M B 1 10 PDB 4R6M 4R6M 1 10 DBREF 4R6M D 1 10 PDB 4R6M 4R6M 1 10 DBREF 4R6M F 1 10 PDB 4R6M 4R6M 1 10 SEQRES 1 A 10 DG DG DA DC DT DT DC DG DC DG SEQRES 1 B 10 DC DG DC DG DT DT DG DT DC DC SEQRES 1 C 10 DG DG DA DC DT DT DC DG DC DG SEQRES 1 D 10 DC DG DC DG DT DT DG DT DC DC SEQRES 1 E 10 DG DG DA DC DT DT DC DG DC DG SEQRES 1 F 10 DC DG DC DG DT DT DG DT DC DC HET HG B 101 1 HET HG B 102 1 HET HG D 101 1 HET HG D 102 1 HET HG E 101 1 HET HG F 101 1 HETNAM HG MERCURY (II) ION FORMUL 7 HG 6(HG 2+) FORMUL 13 HOH *12(H2 O) LINK N3 DT A 5 HG HG B 101 1555 1555 2.20 LINK O2 DT A 5 HG HG B 101 1555 1555 2.78 LINK N3 DT A 6 HG HG B 102 1555 1555 2.15 LINK O4 DT A 6 HG HG B 102 1555 1555 2.83 LINK O6 DG B 4 HG HG B 102 1555 1555 3.13 LINK N3 DT B 5 HG HG B 102 1555 1555 2.29 LINK O2 DT B 5 HG HG B 102 1555 1555 2.75 LINK N3 DT B 6 HG HG B 101 1555 1555 2.21 LINK O2 DT B 6 HG HG B 101 1555 1555 2.96 LINK O2 DT B 6 HG HG B 102 1555 1555 2.90 LINK O6 DG B 7 HG HG B 101 1555 1555 3.06 LINK N3 DT C 5 HG HG D 102 1555 1555 2.16 LINK O2 DT C 5 HG HG D 102 1555 1555 3.09 LINK O4 DT C 5 HG HG D 102 1555 1555 3.12 LINK N3 DT C 6 HG HG D 101 1555 1555 2.16 LINK O4 DT C 6 HG HG D 101 1555 1555 2.50 LINK O6 DG D 4 HG HG D 101 1555 1555 3.20 LINK N3 DT D 5 HG HG D 101 1555 1555 2.36 LINK O4 DT D 5 HG HG D 101 1555 1555 3.14 LINK O2 DT D 6 HG HG D 101 1555 1555 2.82 LINK N3 DT D 6 HG HG D 102 1555 1555 2.19 LINK O4 DT D 6 HG HG D 102 1555 1555 3.09 LINK O2 DT D 6 HG HG D 102 1555 1555 3.18 LINK O6 DG D 7 HG HG D 102 1555 1555 3.12 LINK N3 DT E 5 HG HG E 101 1555 1555 2.31 LINK O4 DT E 5 HG HG E 101 1555 1555 3.00 LINK N3 DT E 6 HG HG F 101 1555 1555 2.31 LINK O4 DT E 6 HG HG F 101 1555 1555 2.91 LINK HG HG E 101 O HOH E 201 1555 1555 2.29 LINK HG HG E 101 O2 DT F 6 1555 1555 2.30 LINK HG HG E 101 N3 DT F 6 1555 1555 2.36 LINK HG HG E 101 O HOH F 201 1555 1555 3.13 LINK O6 DG F 4 HG HG F 101 1555 1555 3.08 LINK N3 DT F 5 HG HG F 101 1555 1555 2.28 LINK O2 DT F 5 HG HG F 101 1555 1555 2.80 LINK HG HG F 101 O HOH F 201 1555 1555 2.36 SITE 1 AC1 5 DT A 5 DT B 5 DT B 6 DG B 7 SITE 2 AC1 5 HG B 102 SITE 1 AC2 5 DT A 6 DG B 4 DT B 5 DT B 6 SITE 2 AC2 5 HG B 101 SITE 1 AC3 6 DT C 6 DC C 7 DG D 4 DT D 5 SITE 2 AC3 6 DT D 6 HG D 102 SITE 1 AC4 6 DC C 4 DT C 5 DT D 5 DT D 6 SITE 2 AC4 6 DG D 7 HG D 101 SITE 1 AC5 5 DT E 5 HOH E 201 DT F 6 DG F 7 SITE 2 AC5 5 HG F 101 SITE 1 AC6 6 DT E 6 HG E 101 DG F 4 DT F 5 SITE 2 AC6 6 DT F 6 HOH F 201 CRYST1 70.785 70.785 108.037 90.00 90.00 120.00 H 3 27 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014127 0.008156 0.000000 0.00000 SCALE2 0.000000 0.016313 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009256 0.00000