data_4R7R # _entry.id 4R7R # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.281 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 4R7R RCSB RCSB087005 WWPDB D_1000087005 # _pdbx_database_related.db_name TargetTrack _pdbx_database_related.db_id CSGID-IDP04091 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4R7R _pdbx_database_status.recvd_initial_deposition_date 2014-08-28 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Kim, Y.' 1 'Zhou, M.' 2 'Shatsman, S.' 3 'Anderson, W.F.' 4 'Joachimiak, A.' 5 'Center for Structural Genomics of Infectious Diseases (CSGID)' 6 # _citation.id primary _citation.title 'Crystal Structure of Putative Lipoprotein from Clostridium perfringens' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Kim, Y.' 1 primary 'Zhou, M.' 2 primary 'Shatsman, S.' 3 primary 'Anderson, W.F.' 4 primary 'Joachimiak, A.' 5 # _cell.entry_id 4R7R _cell.length_a 58.743 _cell.length_b 58.743 _cell.length_c 85.984 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4R7R _symmetry.space_group_name_H-M 'P 32 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Putative lipoprotein' 15117.034 1 ? 'N-terminal deletion (1-30)' d30 ? 2 non-polymer syn GLYCEROL 92.094 1 ? ? ? ? 3 water nat water 18.015 33 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;SNAKPSLNYHTKNLSELVSKNNIKIRLLD(MSE)NIYSEVIVDNEDVRIIDDLLKSLKDSNFINEEALPNKPLYKIFIDL NSEKYVIDIYGDDLITLYPWDSDVRKDYLSLKDIPNSFKLEPFCQYVFNKKQ ; _entity_poly.pdbx_seq_one_letter_code_can ;SNAKPSLNYHTKNLSELVSKNNIKIRLLDMNIYSEVIVDNEDVRIIDDLLKSLKDSNFINEEALPNKPLYKIFIDLNSEK YVIDIYGDDLITLYPWDSDVRKDYLSLKDIPNSFKLEPFCQYVFNKKQ ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier CSGID-IDP04091 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 ASN n 1 3 ALA n 1 4 LYS n 1 5 PRO n 1 6 SER n 1 7 LEU n 1 8 ASN n 1 9 TYR n 1 10 HIS n 1 11 THR n 1 12 LYS n 1 13 ASN n 1 14 LEU n 1 15 SER n 1 16 GLU n 1 17 LEU n 1 18 VAL n 1 19 SER n 1 20 LYS n 1 21 ASN n 1 22 ASN n 1 23 ILE n 1 24 LYS n 1 25 ILE n 1 26 ARG n 1 27 LEU n 1 28 LEU n 1 29 ASP n 1 30 MSE n 1 31 ASN n 1 32 ILE n 1 33 TYR n 1 34 SER n 1 35 GLU n 1 36 VAL n 1 37 ILE n 1 38 VAL n 1 39 ASP n 1 40 ASN n 1 41 GLU n 1 42 ASP n 1 43 VAL n 1 44 ARG n 1 45 ILE n 1 46 ILE n 1 47 ASP n 1 48 ASP n 1 49 LEU n 1 50 LEU n 1 51 LYS n 1 52 SER n 1 53 LEU n 1 54 LYS n 1 55 ASP n 1 56 SER n 1 57 ASN n 1 58 PHE n 1 59 ILE n 1 60 ASN n 1 61 GLU n 1 62 GLU n 1 63 ALA n 1 64 LEU n 1 65 PRO n 1 66 ASN n 1 67 LYS n 1 68 PRO n 1 69 LEU n 1 70 TYR n 1 71 LYS n 1 72 ILE n 1 73 PHE n 1 74 ILE n 1 75 ASP n 1 76 LEU n 1 77 ASN n 1 78 SER n 1 79 GLU n 1 80 LYS n 1 81 TYR n 1 82 VAL n 1 83 ILE n 1 84 ASP n 1 85 ILE n 1 86 TYR n 1 87 GLY n 1 88 ASP n 1 89 ASP n 1 90 LEU n 1 91 ILE n 1 92 THR n 1 93 LEU n 1 94 TYR n 1 95 PRO n 1 96 TRP n 1 97 ASP n 1 98 SER n 1 99 ASP n 1 100 VAL n 1 101 ARG n 1 102 LYS n 1 103 ASP n 1 104 TYR n 1 105 LEU n 1 106 SER n 1 107 LEU n 1 108 LYS n 1 109 ASP n 1 110 ILE n 1 111 PRO n 1 112 ASN n 1 113 SER n 1 114 PHE n 1 115 LYS n 1 116 LEU n 1 117 GLU n 1 118 PRO n 1 119 PHE n 1 120 CYS n 1 121 GLN n 1 122 TYR n 1 123 VAL n 1 124 PHE n 1 125 ASN n 1 126 LYS n 1 127 LYS n 1 128 GLN n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene CPF_1278 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 'ATCC 13124' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Clostridium perfringens ATCC 13124' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 195103 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3) gold' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pMCSG53 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q0TRL6_CLOP1 _struct_ref.pdbx_db_accession Q0TRL6 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;KPSLNYHTKNLSELVSKNNIKIRLLDMNIYSEVIVDNEDVRIIDDLLKSLKDSNFINEEALPNKPLYKIFIDLNSEKYVI DIYGDDLITLYPWDSDVRKDYLSLKDIPNSFKLEPFCQYVFNKKQ ; _struct_ref.pdbx_align_begin 31 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 4R7R _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 4 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 128 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q0TRL6 _struct_ref_seq.db_align_beg 31 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 155 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 125 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4R7R SER A 1 ? UNP Q0TRL6 ? ? 'EXPRESSION TAG' -2 1 1 4R7R ASN A 2 ? UNP Q0TRL6 ? ? 'EXPRESSION TAG' -1 2 1 4R7R ALA A 3 ? UNP Q0TRL6 ? ? 'EXPRESSION TAG' 0 3 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 4R7R _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.83 _exptl_crystal.density_percent_sol 56.58 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp 289 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 8.5 _exptl_crystal_grow.pdbx_details '0.2 M lithium sulfate, 0.1 M Tris pH 8.5, VAPOR DIFFUSION, SITTING DROP, temperature 289K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.details mirrors _diffrn_detector.type 'ADSC QUANTUM 210r' _diffrn_detector.pdbx_collection_date 2012-11-28 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'double crystal monochromator' _diffrn_radiation.pdbx_diffrn_protocol SAD _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97929 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 19-BM' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 19-BM _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.97929 # _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.limit_k_max ? _reflns.d_resolution_high 2.449 _reflns.observed_criterion_F_min ? _reflns.pdbx_netI_over_sigmaI 13.9 _reflns.observed_criterion_F_max ? _reflns.pdbx_Rmerge_I_obs ? _reflns.limit_l_max ? _reflns.limit_k_min ? _reflns.entry_id 4R7R _reflns.B_iso_Wilson_estimate 32.89 _reflns.percent_possible_obs 99.9 _reflns.pdbx_Rsym_value 0.116 _reflns.observed_criterion_sigma_I 0.0 _reflns.observed_criterion_sigma_F 0.0 _reflns.limit_l_min ? _reflns.limit_h_min ? _reflns.R_free_details ? _reflns.number_all 6691 _reflns.d_resolution_low 50 _reflns.pdbx_redundancy 7.7 _reflns.number_obs 6691 _reflns.limit_h_max ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.45 _reflns_shell.d_res_low 2.49 _reflns_shell.percent_possible_all 99.0 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value 0.659 _reflns_shell.meanI_over_sigI_obs 2.2 _reflns_shell.pdbx_redundancy 5.5 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 310 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.number_possible ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.meanI_over_sigI_all ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.ls_percent_reflns_R_free 5.12 _refine.overall_SU_B ? _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_R_Free_selection_details random _refine.overall_FOM_free_R_set ? _refine.pdbx_data_cutoff_low_absF ? _refine.entry_id 4R7R _refine.aniso_B[2][3] ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_ML 0.23 _refine.aniso_B[1][3] ? _refine.pdbx_stereochemistry_target_values ML _refine.aniso_B[3][3] ? _refine.solvent_model_param_ksol ? _refine.ls_number_restraints ? _refine.aniso_B[1][1] ? _refine.pdbx_overall_ESU_R ? _refine.ls_R_factor_obs 0.188 _refine.occupancy_min ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_starting_model ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.pdbx_isotropic_thermal_model mixed _refine.pdbx_method_to_determine_struct SAD _refine.occupancy_max ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.correlation_coeff_Fo_to_Fc ? _refine.ls_number_reflns_R_free 314 _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_ls_sigma_F 0.0 _refine.ls_percent_reflns_obs 92.08 _refine.ls_R_factor_R_work 0.185 _refine.overall_SU_R_free ? _refine.ls_d_res_high 2.449 _refine.pdbx_overall_ESU_R_Free ? _refine.B_iso_min ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.B_iso_mean 41.9 _refine.pdbx_stereochem_target_val_spec_case ? _refine.ls_R_factor_all 0.188 _refine.aniso_B[2][2] ? _refine.B_iso_max ? _refine.pdbx_ls_sigma_I ? _refine.ls_d_res_low 32.837 _refine.pdbx_overall_phase_error 24.32 _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.aniso_B[1][2] ? _refine.ls_R_factor_R_free 0.238 _refine.ls_R_factor_R_free_error ? _refine.ls_number_reflns_obs 6137 _refine.overall_FOM_work_R_set ? _refine.ls_number_parameters ? _refine.details ? _refine.ls_number_reflns_all 6137 _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.solvent_model_param_bsol ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1013 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 6 _refine_hist.number_atoms_solvent 33 _refine_hist.number_atoms_total 1052 _refine_hist.d_res_high 2.449 _refine_hist.d_res_low 32.837 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id f_bond_d 0.009 ? ? 1038 ? 'X-RAY DIFFRACTION' f_angle_d 1.101 ? ? 1404 ? 'X-RAY DIFFRACTION' f_dihedral_angle_d 13.415 ? ? 396 ? 'X-RAY DIFFRACTION' f_chiral_restr 0.040 ? ? 159 ? 'X-RAY DIFFRACTION' f_plane_restr 0.004 ? ? 177 ? 'X-RAY DIFFRACTION' # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.redundancy_reflns_obs 'X-RAY DIFFRACTION' . 2.4494 3.0856 2610 0.2138 84.00 0.2788 . . 139 . . 2749 . 'X-RAY DIFFRACTION' . 3.0856 32.8397 3213 0.1749 100.00 0.2239 . . 175 . . 3388 . # _struct.entry_id 4R7R _struct.title 'Crystal Structure of Putative Lipoprotein from Clostridium perfringens' _struct.pdbx_descriptor 'Putative lipoprotein' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4R7R _struct_keywords.pdbx_keywords 'LIPID BINDING PROTEIN' _struct_keywords.text ;Structural Genomics, NIAID, National Institute of Allergy and Infectious Diseases, Center for Structural Genomics of Infectious Diseases, CSGID, alpha-beta-fold, LIPID BINDING PROTEIN ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASN A 8 ? VAL A 18 ? ASN A 5 VAL A 15 1 ? 11 HELX_P HELX_P2 2 ARG A 44 ? LEU A 53 ? ARG A 41 LEU A 50 1 ? 10 HELX_P HELX_P3 3 LYS A 54 ? SER A 56 ? LYS A 51 SER A 53 5 ? 3 HELX_P HELX_P4 4 PRO A 111 ? PHE A 114 ? PRO A 108 PHE A 111 5 ? 4 HELX_P HELX_P5 5 LYS A 115 ? LYS A 126 ? LYS A 112 LYS A 123 1 ? 12 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale1 covale ? ? A ASP 29 C ? ? ? 1_555 A MSE 30 N ? ? A ASP 26 A MSE 27 1_555 ? ? ? ? ? ? ? 1.331 ? covale2 covale ? ? A MSE 30 C ? ? ? 1_555 A ASN 31 N ? ? A MSE 27 A ASN 28 1_555 ? ? ? ? ? ? ? 1.327 ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 7 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel A 6 7 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 GLU A 35 ? ILE A 37 ? GLU A 32 ILE A 34 A 2 LYS A 24 ? ASP A 29 ? LYS A 21 ASP A 26 A 3 TYR A 70 ? ASP A 75 ? TYR A 67 ASP A 72 A 4 LYS A 80 ? ILE A 85 ? LYS A 77 ILE A 82 A 5 LEU A 90 ? PRO A 95 ? LEU A 87 PRO A 92 A 6 ASP A 103 ? SER A 106 ? ASP A 100 SER A 103 A 7 PHE A 58 ? ILE A 59 ? PHE A 55 ILE A 56 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O VAL A 36 ? O VAL A 33 N LEU A 27 ? N LEU A 24 A 2 3 N ARG A 26 ? N ARG A 23 O PHE A 73 ? O PHE A 70 A 3 4 N TYR A 70 ? N TYR A 67 O ILE A 85 ? O ILE A 82 A 4 5 N VAL A 82 ? N VAL A 79 O TYR A 94 ? O TYR A 91 A 5 6 N LEU A 93 ? N LEU A 90 O ASP A 103 ? O ASP A 100 A 6 7 O TYR A 104 ? O TYR A 101 N ILE A 59 ? N ILE A 56 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id ? _struct_site.pdbx_auth_comp_id ? _struct_site.pdbx_auth_seq_id ? _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 2 _struct_site.details 'BINDING SITE FOR RESIDUE GOL A 201' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 2 ASN A 8 ? ASN A 5 . ? 1_555 ? 2 AC1 2 LEU A 50 ? LEU A 47 . ? 1_555 ? # _database_PDB_matrix.entry_id 4R7R _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 4R7R _atom_sites.fract_transf_matrix[1][1] 0.017023 _atom_sites.fract_transf_matrix[1][2] 0.009828 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.019657 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.011630 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 -2 ? ? ? A . n A 1 2 ASN 2 -1 ? ? ? A . n A 1 3 ALA 3 0 0 ALA ALA A . n A 1 4 LYS 4 1 1 LYS LYS A . n A 1 5 PRO 5 2 2 PRO PRO A . n A 1 6 SER 6 3 3 SER SER A . n A 1 7 LEU 7 4 4 LEU LEU A . n A 1 8 ASN 8 5 5 ASN ASN A . n A 1 9 TYR 9 6 6 TYR TYR A . n A 1 10 HIS 10 7 7 HIS HIS A . n A 1 11 THR 11 8 8 THR THR A . n A 1 12 LYS 12 9 9 LYS LYS A . n A 1 13 ASN 13 10 10 ASN ASN A . n A 1 14 LEU 14 11 11 LEU LEU A . n A 1 15 SER 15 12 12 SER SER A . n A 1 16 GLU 16 13 13 GLU GLU A . n A 1 17 LEU 17 14 14 LEU LEU A . n A 1 18 VAL 18 15 15 VAL VAL A . n A 1 19 SER 19 16 16 SER SER A . n A 1 20 LYS 20 17 ? ? ? A . n A 1 21 ASN 21 18 ? ? ? A . n A 1 22 ASN 22 19 19 ASN ASN A . n A 1 23 ILE 23 20 20 ILE ILE A . n A 1 24 LYS 24 21 21 LYS LYS A . n A 1 25 ILE 25 22 22 ILE ILE A . n A 1 26 ARG 26 23 23 ARG ARG A . n A 1 27 LEU 27 24 24 LEU LEU A . n A 1 28 LEU 28 25 25 LEU LEU A . n A 1 29 ASP 29 26 26 ASP ASP A . n A 1 30 MSE 30 27 27 MSE MSE A . n A 1 31 ASN 31 28 28 ASN ASN A . n A 1 32 ILE 32 29 29 ILE ILE A . n A 1 33 TYR 33 30 30 TYR TYR A . n A 1 34 SER 34 31 31 SER SER A . n A 1 35 GLU 35 32 32 GLU GLU A . n A 1 36 VAL 36 33 33 VAL VAL A . n A 1 37 ILE 37 34 34 ILE ILE A . n A 1 38 VAL 38 35 35 VAL VAL A . n A 1 39 ASP 39 36 36 ASP ASP A . n A 1 40 ASN 40 37 37 ASN ASN A . n A 1 41 GLU 41 38 38 GLU GLU A . n A 1 42 ASP 42 39 39 ASP ASP A . n A 1 43 VAL 43 40 40 VAL VAL A . n A 1 44 ARG 44 41 41 ARG ARG A . n A 1 45 ILE 45 42 42 ILE ILE A . n A 1 46 ILE 46 43 43 ILE ILE A . n A 1 47 ASP 47 44 44 ASP ASP A . n A 1 48 ASP 48 45 45 ASP ASP A . n A 1 49 LEU 49 46 46 LEU LEU A . n A 1 50 LEU 50 47 47 LEU LEU A . n A 1 51 LYS 51 48 48 LYS LYS A . n A 1 52 SER 52 49 49 SER SER A . n A 1 53 LEU 53 50 50 LEU LEU A . n A 1 54 LYS 54 51 51 LYS LYS A . n A 1 55 ASP 55 52 52 ASP ASP A . n A 1 56 SER 56 53 53 SER SER A . n A 1 57 ASN 57 54 54 ASN ASN A . n A 1 58 PHE 58 55 55 PHE PHE A . n A 1 59 ILE 59 56 56 ILE ILE A . n A 1 60 ASN 60 57 57 ASN ASN A . n A 1 61 GLU 61 58 58 GLU GLU A . n A 1 62 GLU 62 59 59 GLU GLU A . n A 1 63 ALA 63 60 60 ALA ALA A . n A 1 64 LEU 64 61 61 LEU LEU A . n A 1 65 PRO 65 62 62 PRO PRO A . n A 1 66 ASN 66 63 63 ASN ASN A . n A 1 67 LYS 67 64 64 LYS LYS A . n A 1 68 PRO 68 65 65 PRO PRO A . n A 1 69 LEU 69 66 66 LEU LEU A . n A 1 70 TYR 70 67 67 TYR TYR A . n A 1 71 LYS 71 68 68 LYS LYS A . n A 1 72 ILE 72 69 69 ILE ILE A . n A 1 73 PHE 73 70 70 PHE PHE A . n A 1 74 ILE 74 71 71 ILE ILE A . n A 1 75 ASP 75 72 72 ASP ASP A . n A 1 76 LEU 76 73 73 LEU LEU A . n A 1 77 ASN 77 74 74 ASN ASN A . n A 1 78 SER 78 75 75 SER SER A . n A 1 79 GLU 79 76 76 GLU GLU A . n A 1 80 LYS 80 77 77 LYS LYS A . n A 1 81 TYR 81 78 78 TYR TYR A . n A 1 82 VAL 82 79 79 VAL VAL A . n A 1 83 ILE 83 80 80 ILE ILE A . n A 1 84 ASP 84 81 81 ASP ASP A . n A 1 85 ILE 85 82 82 ILE ILE A . n A 1 86 TYR 86 83 83 TYR TYR A . n A 1 87 GLY 87 84 84 GLY GLY A . n A 1 88 ASP 88 85 85 ASP ASP A . n A 1 89 ASP 89 86 86 ASP ASP A . n A 1 90 LEU 90 87 87 LEU LEU A . n A 1 91 ILE 91 88 88 ILE ILE A . n A 1 92 THR 92 89 89 THR THR A . n A 1 93 LEU 93 90 90 LEU LEU A . n A 1 94 TYR 94 91 91 TYR TYR A . n A 1 95 PRO 95 92 92 PRO PRO A . n A 1 96 TRP 96 93 93 TRP TRP A . n A 1 97 ASP 97 94 94 ASP ASP A . n A 1 98 SER 98 95 95 SER SER A . n A 1 99 ASP 99 96 96 ASP ASP A . n A 1 100 VAL 100 97 97 VAL VAL A . n A 1 101 ARG 101 98 98 ARG ARG A . n A 1 102 LYS 102 99 99 LYS LYS A . n A 1 103 ASP 103 100 100 ASP ASP A . n A 1 104 TYR 104 101 101 TYR TYR A . n A 1 105 LEU 105 102 102 LEU LEU A . n A 1 106 SER 106 103 103 SER SER A . n A 1 107 LEU 107 104 104 LEU LEU A . n A 1 108 LYS 108 105 105 LYS LYS A . n A 1 109 ASP 109 106 106 ASP ASP A . n A 1 110 ILE 110 107 107 ILE ILE A . n A 1 111 PRO 111 108 108 PRO PRO A . n A 1 112 ASN 112 109 109 ASN ASN A . n A 1 113 SER 113 110 110 SER SER A . n A 1 114 PHE 114 111 111 PHE PHE A . n A 1 115 LYS 115 112 112 LYS LYS A . n A 1 116 LEU 116 113 113 LEU LEU A . n A 1 117 GLU 117 114 114 GLU GLU A . n A 1 118 PRO 118 115 115 PRO PRO A . n A 1 119 PHE 119 116 116 PHE PHE A . n A 1 120 CYS 120 117 117 CYS CYS A . n A 1 121 GLN 121 118 118 GLN GLN A . n A 1 122 TYR 122 119 119 TYR TYR A . n A 1 123 VAL 123 120 120 VAL VAL A . n A 1 124 PHE 124 121 121 PHE PHE A . n A 1 125 ASN 125 122 122 ASN ASN A . n A 1 126 LYS 126 123 123 LYS LYS A . n A 1 127 LYS 127 124 ? ? ? A . n A 1 128 GLN 128 125 ? ? ? A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name 'NIAID, National Institute of Allergy and Infectious Diseases' _pdbx_SG_project.full_name_of_center 'Center for Structural Genomics of Infectious Diseases' _pdbx_SG_project.initial_of_center CSGID # _pdbx_struct_mod_residue.id 1 _pdbx_struct_mod_residue.label_asym_id A _pdbx_struct_mod_residue.label_comp_id MSE _pdbx_struct_mod_residue.label_seq_id 30 _pdbx_struct_mod_residue.auth_asym_id A _pdbx_struct_mod_residue.auth_comp_id MSE _pdbx_struct_mod_residue.auth_seq_id 27 _pdbx_struct_mod_residue.PDB_ins_code ? _pdbx_struct_mod_residue.parent_comp_id MET _pdbx_struct_mod_residue.details SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _pdbx_audit_revision_history.ordinal 1 _pdbx_audit_revision_history.data_content_type 'Structure model' _pdbx_audit_revision_history.major_revision 1 _pdbx_audit_revision_history.minor_revision 0 _pdbx_audit_revision_history.revision_date 2014-09-10 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] 'X-RAY DIFFRACTION' 1 ? refined 37.5448 -21.4806 -27.6700 0.3621 0.8995 0.4732 0.0424 0.1584 -0.1087 6.7645 6.9411 8.2634 -0.2954 -7.3784 -0.9025 -0.5097 2.3429 -0.8271 -1.1798 0.1599 -0.3015 1.1029 0.1040 0.1948 'X-RAY DIFFRACTION' 2 ? refined 29.7047 -10.3197 -25.9502 0.4007 0.4487 0.3145 0.0337 0.0374 0.0766 8.9657 5.3356 5.4394 -3.8865 -2.4789 5.1426 0.4113 0.9498 1.1471 -0.8013 0.3765 -0.7758 -0.9945 0.8556 -0.4595 'X-RAY DIFFRACTION' 3 ? refined 15.8155 -11.6959 -12.6158 0.2821 0.4229 0.3264 0.1033 0.0032 -0.0476 5.7965 7.0098 4.9816 0.2096 0.4017 0.3136 -0.0917 -0.4556 0.0255 -0.0481 0.3814 0.2678 -0.4893 -0.5701 -0.1762 'X-RAY DIFFRACTION' 4 ? refined 17.8346 -3.1000 -9.3184 0.4006 0.4026 0.3745 0.0117 0.1183 -0.0206 4.0175 4.0911 5.7665 -2.7854 2.5106 -4.7541 -0.1022 0.1378 1.0308 0.5526 -0.4165 -0.6011 -0.4171 -1.0859 0.2943 'X-RAY DIFFRACTION' 5 ? refined 33.6702 -8.6590 -15.0055 0.3377 0.3070 0.2425 -0.0227 0.0416 0.0596 9.1097 7.9469 4.0146 -7.2582 -1.5972 1.3546 0.0483 -0.1942 1.5059 -0.2220 -0.0617 -1.0704 -0.5399 0.6067 -0.1812 'X-RAY DIFFRACTION' 6 ? refined 26.1511 -25.7857 -15.4326 0.5233 0.2689 0.3308 -0.0562 -0.0148 -0.1769 6.9495 1.9719 5.1602 2.8287 -5.6825 -2.9395 -1.0500 1.0424 -1.6464 -1.1320 0.0397 -0.5448 1.5088 -0.3122 0.2347 'X-RAY DIFFRACTION' 7 ? refined 18.9879 -9.7579 -19.3726 0.3748 0.2390 0.3384 0.0346 0.1009 -0.0371 5.7964 6.0862 7.9064 0.6781 -0.4050 -2.0377 0.1028 0.3549 0.3822 -0.7491 0.1894 -0.3689 -0.6001 -0.5994 -0.2256 'X-RAY DIFFRACTION' 8 ? refined 26.9429 -17.4498 -16.4591 0.2050 0.1813 0.2301 0.0473 -0.0341 -0.0071 2.3715 2.1315 4.7791 1.6486 -0.9395 1.3291 0.1246 0.0923 -0.0387 0.1105 0.0419 -0.0735 0.3020 0.2893 -0.1009 'X-RAY DIFFRACTION' 9 ? refined 21.4711 -10.4393 -3.7494 0.2568 0.3361 0.2137 0.0005 0.0238 -0.0264 5.5698 3.6826 4.6286 0.2794 0.1528 -0.7424 -0.0892 -0.0269 -0.1321 0.6062 0.0111 0.4819 0.2740 -1.0332 0.1244 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 'X-RAY DIFFRACTION' 1 1 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid 0 through 5 ) ; 'X-RAY DIFFRACTION' 2 2 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid 6 through 15 ) ; 'X-RAY DIFFRACTION' 3 3 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid 16 through 31 ) ; 'X-RAY DIFFRACTION' 4 4 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid 32 through 39 ) ; 'X-RAY DIFFRACTION' 5 5 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid 40 through 54 ) ; 'X-RAY DIFFRACTION' 6 6 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid 55 through 66 ) ; 'X-RAY DIFFRACTION' 7 7 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid 67 through 76 ) ; 'X-RAY DIFFRACTION' 8 8 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid 77 through 112 ) ; 'X-RAY DIFFRACTION' 9 9 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid 113 through 123 ) ; # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal SBC-Collect 'data collection' . ? 1 HKL-3000 'data collection' . ? 2 HKL-3000 phasing . ? 3 PHENIX 'model building' . ? 4 PHENIX refinement '(phenix.refine: dev_1745)' ? 5 HKL-3000 'data reduction' . ? 6 HKL-3000 'data scaling' . ? 7 PHENIX phasing . ? 8 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A SER -2 ? A SER 1 2 1 Y 1 A ASN -1 ? A ASN 2 3 1 Y 1 A LYS 17 ? A LYS 20 4 1 Y 1 A ASN 18 ? A ASN 21 5 1 Y 1 A LYS 124 ? A LYS 127 6 1 Y 1 A GLN 125 ? A GLN 128 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 GLYCEROL GOL 3 water HOH # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GOL 1 201 130 GOL GOL A . C 3 HOH 1 301 1 HOH HOH A . C 3 HOH 2 302 2 HOH HOH A . C 3 HOH 3 303 3 HOH HOH A . C 3 HOH 4 304 4 HOH HOH A . C 3 HOH 5 305 5 HOH HOH A . C 3 HOH 6 306 6 HOH HOH A . C 3 HOH 7 307 7 HOH HOH A . C 3 HOH 8 308 8 HOH HOH A . C 3 HOH 9 309 9 HOH HOH A . C 3 HOH 10 310 10 HOH HOH A . C 3 HOH 11 311 11 HOH HOH A . C 3 HOH 12 312 12 HOH HOH A . C 3 HOH 13 313 13 HOH HOH A . C 3 HOH 14 314 14 HOH HOH A . C 3 HOH 15 315 15 HOH HOH A . C 3 HOH 16 316 16 HOH HOH A . C 3 HOH 17 317 17 HOH HOH A . C 3 HOH 18 318 18 HOH HOH A . C 3 HOH 19 319 19 HOH HOH A . C 3 HOH 20 320 20 HOH HOH A . C 3 HOH 21 321 21 HOH HOH A . C 3 HOH 22 322 22 HOH HOH A . C 3 HOH 23 323 23 HOH HOH A . C 3 HOH 24 324 24 HOH HOH A . C 3 HOH 25 325 25 HOH HOH A . C 3 HOH 26 326 26 HOH HOH A . C 3 HOH 27 327 27 HOH HOH A . C 3 HOH 28 328 28 HOH HOH A . C 3 HOH 29 329 29 HOH HOH A . C 3 HOH 30 330 30 HOH HOH A . C 3 HOH 31 331 31 HOH HOH A . C 3 HOH 32 332 32 HOH HOH A . C 3 HOH 33 333 33 HOH HOH A . #