HEADER OXIDOREDUCTASE 29-AUG-14 4R82 TITLE STREPTOMYCES GLOBISPORUS C-1027 NADH:FAD OXIDOREDUCTASE SGCE6 IN TITLE 2 COMPLEX WITH NAD AND FAD FRAGMENTS COMPND MOL_ID: 1; COMPND 2 MOLECULE: OXIDOREDUCTASE; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STREPTOMYCES GLOBISPORUS; SOURCE 3 ORGANISM_TAXID: 1908; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)MAGIC; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PMCSG73 KEYWDS STRUCTURAL GENOMICS, PSI-BIOLOGY, PROTEIN STRUCTURE INITIATIVE, KEYWDS 2 MIDWEST CENTER FOR STRUCTURAL GENOMICS, MCSG, ENZYME DISCOVERY FOR KEYWDS 3 NATURAL PRODUCT BIOSYNTHESIS, NATPRO, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR K.TAN,L.BIGELOW,S.CLANCY,G.BABNIGG,C.A.BINGMAN,R.YENNAMALLI, AUTHOR 2 J.R.LOHMAN,M.MA,B.SHEN,G.N.PHILLIPS JR.,A.JOACHIMIAK,MIDWEST CENTER AUTHOR 3 FOR STRUCTURAL GENOMICS (MCSG),ENZYME DISCOVERY FOR NATURAL PRODUCT AUTHOR 4 BIOSYNTHESIS (NATPRO) REVDAT 3 20-NOV-24 4R82 1 REMARK SEQADV LINK REVDAT 2 02-NOV-16 4R82 1 AUTHOR JRNL REMARK TITLE REVDAT 1 01-OCT-14 4R82 0 JRNL AUTH C.Y.CHANG,J.R.LOHMAN,H.CAO,K.TAN,J.D.RUDOLF,M.MA,W.XU, JRNL AUTH 2 C.A.BINGMAN,R.M.YENNAMALLI,L.BIGELOW,G.BABNIGG,X.YAN, JRNL AUTH 3 A.JOACHIMIAK,G.N.PHILLIPS,B.SHEN JRNL TITL CRYSTAL STRUCTURES OF SGCE6 AND SGCC, THE TWO-COMPONENT JRNL TITL 2 MONOOXYGENASE THAT CATALYZES HYDROXYLATION OF A CARRIER JRNL TITL 3 PROTEIN-TETHERED SUBSTRATE DURING THE BIOSYNTHESIS OF THE JRNL TITL 4 ENEDIYNE ANTITUMOR ANTIBIOTIC C-1027 IN STREPTOMYCES JRNL TITL 5 GLOBISPORUS. JRNL REF BIOCHEMISTRY V. 55 5142 2016 JRNL REFN ISSN 0006-2960 JRNL PMID 27560143 JRNL DOI 10.1021/ACS.BIOCHEM.6B00713 REMARK 2 REMARK 2 RESOLUTION. 1.66 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.8.2_1309) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.66 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 34.93 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 3 NUMBER OF REFLECTIONS : 43034 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.164 REMARK 3 R VALUE (WORKING SET) : 0.163 REMARK 3 FREE R VALUE : 0.188 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.040 REMARK 3 FREE R VALUE TEST SET COUNT : 2168 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 34.9355 - 4.0887 0.98 2773 149 0.1579 0.1511 REMARK 3 2 4.0887 - 3.2461 0.99 2715 153 0.1455 0.1802 REMARK 3 3 3.2461 - 2.8359 1.00 2758 132 0.1593 0.2084 REMARK 3 4 2.8359 - 2.5767 1.00 2769 136 0.1697 0.1854 REMARK 3 5 2.5767 - 2.3921 1.00 2758 127 0.1640 0.2178 REMARK 3 6 2.3921 - 2.2511 1.00 2711 161 0.1589 0.2013 REMARK 3 7 2.2511 - 2.1384 1.00 2721 153 0.1604 0.1807 REMARK 3 8 2.1384 - 2.0453 1.00 2720 150 0.1585 0.1760 REMARK 3 9 2.0453 - 1.9666 1.00 2713 167 0.1637 0.1721 REMARK 3 10 1.9666 - 1.8987 1.00 2703 138 0.1651 0.2078 REMARK 3 11 1.8987 - 1.8393 1.00 2750 129 0.1756 0.1912 REMARK 3 12 1.8393 - 1.7868 1.00 2732 147 0.1779 0.2313 REMARK 3 13 1.7868 - 1.7397 1.00 2712 148 0.1831 0.2123 REMARK 3 14 1.7397 - 1.6973 0.99 2678 159 0.1958 0.2234 REMARK 3 15 1.6973 - 1.6587 0.96 2653 119 0.2445 0.2687 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.160 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 17.900 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 17.80 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 2752 REMARK 3 ANGLE : 1.158 3772 REMARK 3 CHIRALITY : 0.078 422 REMARK 3 PLANARITY : 0.005 475 REMARK 3 DIHEDRAL : 12.838 944 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 8 THROUGH 96 ) REMARK 3 ORIGIN FOR THE GROUP (A): 12.1960 0.7508 10.6163 REMARK 3 T TENSOR REMARK 3 T11: 0.1041 T22: 0.0814 REMARK 3 T33: 0.1171 T12: -0.0019 REMARK 3 T13: -0.0123 T23: -0.0067 REMARK 3 L TENSOR REMARK 3 L11: 1.0957 L22: 0.6480 REMARK 3 L33: 1.5651 L12: -0.1263 REMARK 3 L13: -0.3538 L23: 0.1632 REMARK 3 S TENSOR REMARK 3 S11: 0.0082 S12: 0.0090 S13: -0.0457 REMARK 3 S21: -0.0487 S22: -0.0360 S23: 0.0473 REMARK 3 S31: -0.0252 S32: -0.1581 S33: 0.0139 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 97 THROUGH 177 ) REMARK 3 ORIGIN FOR THE GROUP (A): 19.1309 2.2911 5.2865 REMARK 3 T TENSOR REMARK 3 T11: 0.1104 T22: 0.0898 REMARK 3 T33: 0.1065 T12: -0.0033 REMARK 3 T13: -0.0377 T23: -0.0114 REMARK 3 L TENSOR REMARK 3 L11: 1.2897 L22: 1.7449 REMARK 3 L33: 1.4116 L12: 0.0551 REMARK 3 L13: -0.6060 L23: -0.2411 REMARK 3 S TENSOR REMARK 3 S11: 0.0022 S12: 0.0760 S13: -0.0272 REMARK 3 S21: -0.1676 S22: 0.0066 S23: 0.0292 REMARK 3 S31: 0.0126 S32: -0.0846 S33: 0.0230 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 9 THROUGH 67 ) REMARK 3 ORIGIN FOR THE GROUP (A): 23.4669 2.6135 21.0954 REMARK 3 T TENSOR REMARK 3 T11: 0.1071 T22: 0.0999 REMARK 3 T33: 0.1165 T12: 0.0038 REMARK 3 T13: -0.0229 T23: -0.0054 REMARK 3 L TENSOR REMARK 3 L11: 1.6970 L22: 0.9096 REMARK 3 L33: 1.7856 L12: -0.0228 REMARK 3 L13: -0.8026 L23: 0.0861 REMARK 3 S TENSOR REMARK 3 S11: 0.0061 S12: -0.0914 S13: -0.0924 REMARK 3 S21: 0.0492 S22: 0.0421 S23: -0.0619 REMARK 3 S31: 0.0153 S32: 0.1890 S33: -0.0512 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 68 THROUGH 83 ) REMARK 3 ORIGIN FOR THE GROUP (A): 18.7988 -0.6926 34.1689 REMARK 3 T TENSOR REMARK 3 T11: 0.2372 T22: 0.1989 REMARK 3 T33: 0.1370 T12: -0.0107 REMARK 3 T13: -0.0277 T23: 0.0254 REMARK 3 L TENSOR REMARK 3 L11: 3.0434 L22: 5.1498 REMARK 3 L33: 2.2528 L12: -2.0660 REMARK 3 L13: -0.8881 L23: -1.2701 REMARK 3 S TENSOR REMARK 3 S11: -0.1829 S12: -0.5165 S13: -0.2692 REMARK 3 S21: 0.2285 S22: 0.3532 S23: 0.1280 REMARK 3 S31: 0.3136 S32: -0.0977 S33: -0.1138 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 84 THROUGH 134 ) REMARK 3 ORIGIN FOR THE GROUP (A): 17.5080 11.4120 34.6799 REMARK 3 T TENSOR REMARK 3 T11: 0.1706 T22: 0.1676 REMARK 3 T33: 0.0944 T12: 0.0122 REMARK 3 T13: 0.0030 T23: -0.0264 REMARK 3 L TENSOR REMARK 3 L11: 2.3629 L22: 3.9653 REMARK 3 L33: 3.0713 L12: 0.4240 REMARK 3 L13: 0.2327 L23: 0.1511 REMARK 3 S TENSOR REMARK 3 S11: 0.0683 S12: -0.4036 S13: 0.0935 REMARK 3 S21: 0.4420 S22: 0.0325 S23: -0.1114 REMARK 3 S31: -0.0892 S32: 0.0745 S33: -0.0520 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 135 THROUGH 177 ) REMARK 3 ORIGIN FOR THE GROUP (A): 15.5198 7.8780 22.2622 REMARK 3 T TENSOR REMARK 3 T11: 0.0963 T22: 0.1224 REMARK 3 T33: 0.0313 T12: -0.0029 REMARK 3 T13: -0.0277 T23: -0.0187 REMARK 3 L TENSOR REMARK 3 L11: 2.8035 L22: 1.8743 REMARK 3 L33: 1.0830 L12: -0.5278 REMARK 3 L13: -0.4597 L23: 0.0128 REMARK 3 S TENSOR REMARK 3 S11: 0.0141 S12: -0.0214 S13: 0.0949 REMARK 3 S21: -0.0018 S22: 0.0123 S23: 0.0928 REMARK 3 S31: -0.0731 S32: -0.0811 S33: -0.0338 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4R82 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 04-SEP-14. REMARK 100 THE DEPOSITION ID IS D_1000087016. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-AUG-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97935 REMARK 200 MONOCHROMATOR : SI 111 CRYSTAL REMARK 200 OPTICS : MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 43097 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.660 REMARK 200 RESOLUTION RANGE LOW (A) : 35.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -5.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 200 DATA REDUNDANCY : 3.700 REMARK 200 R MERGE (I) : 0.09000 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 22.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.66 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.69 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.3 REMARK 200 DATA REDUNDANCY IN SHELL : 2.90 REMARK 200 R MERGE FOR SHELL (I) : 0.52100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SHELXD, MLPHARE, HKL-3000, DM REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.90 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.32 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2M CALCIUM ACETATE, 0.1M MES:NACL, REMARK 280 20% (W/V) PEG8000, PH 6.0, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 31.41500 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 9830 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 14740 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -91.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A -2 REMARK 465 ASN A -1 REMARK 465 ALA A 0 REMARK 465 MSE A 1 REMARK 465 SER A 2 REMARK 465 PRO A 3 REMARK 465 ILE A 4 REMARK 465 ILE A 5 REMARK 465 ALA A 6 REMARK 465 PRO A 7 REMARK 465 ARG A 100 REMARK 465 PRO A 101 REMARK 465 PRO A 102 REMARK 465 GLY A 103 REMARK 465 GLU A 178 REMARK 465 GLY A 179 REMARK 465 ARG A 180 REMARK 465 ALA A 181 REMARK 465 ALA A 182 REMARK 465 SER B -2 REMARK 465 ASN B -1 REMARK 465 ALA B 0 REMARK 465 MSE B 1 REMARK 465 SER B 2 REMARK 465 PRO B 3 REMARK 465 ILE B 4 REMARK 465 ILE B 5 REMARK 465 ALA B 6 REMARK 465 PRO B 7 REMARK 465 PRO B 8 REMARK 465 ARG B 100 REMARK 465 PRO B 101 REMARK 465 PRO B 102 REMARK 465 GLY B 103 REMARK 465 GLU B 178 REMARK 465 GLY B 179 REMARK 465 ARG B 180 REMARK 465 ALA B 181 REMARK 465 ALA B 182 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 15 CE NZ REMARK 470 GLU A 40 CG CD OE1 OE2 REMARK 470 ARG A 42 CZ NH1 NH2 REMARK 470 GLN A 71 CG CD OE1 NE2 REMARK 470 LYS A 90 CD CE NZ REMARK 470 VAL A 104 CG1 CG2 REMARK 470 ASP A 177 CG OD1 OD2 REMARK 470 LYS B 15 NZ REMARK 470 GLU B 40 CG CD OE1 OE2 REMARK 470 GLN B 71 CG CD OE1 NE2 REMARK 470 GLU B 89 CG CD OE1 OE2 REMARK 470 LYS B 90 NZ REMARK 470 HIS B 98 CG ND1 CD2 CE1 NE2 REMARK 470 SER B 99 OG REMARK 470 VAL B 104 CG1 CG2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O GLU B 40 NH1 ARG B 72 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 NAD A 201 REMARK 610 NAD A 202 REMARK 610 FAD A 209 REMARK 610 NAD B 201 REMARK 610 NAD B 202 REMARK 610 FAD B 207 REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 203 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 16 OD2 REMARK 620 2 HOH A 350 O 85.1 REMARK 620 3 HOH A 365 O 96.5 73.6 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 208 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 THR A 50 OG1 REMARK 620 2 HOH A 306 O 110.3 REMARK 620 3 THR B 50 OG1 55.2 117.4 REMARK 620 4 HOH B 425 O 114.6 125.3 113.4 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 204 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ACT A 205 O REMARK 620 2 HOH A 328 O 63.8 REMARK 620 3 HOH A 411 O 135.9 75.0 REMARK 620 4 PRO B 157 O 145.3 146.5 78.7 REMARK 620 5 ARG B 159 O 93.5 101.7 79.5 93.5 REMARK 620 6 HOH B 311 O 74.0 137.4 146.7 72.9 85.2 REMARK 620 7 HOH B 400 O 91.2 85.0 100.6 79.7 173.1 91.2 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 203 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 16 OD2 REMARK 620 2 HOH B 324 O 94.7 REMARK 620 3 HOH B 374 O 76.8 73.4 REMARK 620 4 HOH B 397 O 163.5 85.5 87.4 REMARK 620 5 HOH B 399 O 88.8 76.4 145.1 107.3 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NAD A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NAD A 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 204 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT A 205 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT A 206 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT A 207 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 208 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FAD A 209 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NAD B 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NAD B 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA B 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA B 204 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL B 205 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT B 206 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FAD B 207 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: MCSG-APC109096 RELATED DB: TARGETTRACK REMARK 900 RELATED ID: NATPRO-GO.119605 RELATED DB: TARGETTRACK REMARK 900 RELATED ID: 4OO2 RELATED DB: PDB REMARK 900 RELATED ID: 4HX6 RELATED DB: PDB DBREF 4R82 A 1 182 UNP Q8GME2 Q8GME2_STRGL 1 182 DBREF 4R82 B 1 182 UNP Q8GME2 Q8GME2_STRGL 1 182 SEQADV 4R82 SER A -2 UNP Q8GME2 EXPRESSION TAG SEQADV 4R82 ASN A -1 UNP Q8GME2 EXPRESSION TAG SEQADV 4R82 ALA A 0 UNP Q8GME2 EXPRESSION TAG SEQADV 4R82 SER B -2 UNP Q8GME2 EXPRESSION TAG SEQADV 4R82 ASN B -1 UNP Q8GME2 EXPRESSION TAG SEQADV 4R82 ALA B 0 UNP Q8GME2 EXPRESSION TAG SEQRES 1 A 185 SER ASN ALA MSE SER PRO ILE ILE ALA PRO PRO ALA GLU SEQRES 2 A 185 LEU VAL ASP PRO LYS ASP ARG VAL GLN LEU ARG ARG VAL SEQRES 3 A 185 PHE GLY ASP PHE PRO THR GLY VAL THR VAL VAL THR VAL SEQRES 4 A 185 GLY GLY SER GLU PRO ARG GLY MSE THR ALA ASN SER PHE SEQRES 5 A 185 THR SER VAL SER LEU SER PRO PRO LEU VAL LEU ILE CYS SEQRES 6 A 185 VAL GLY LYS ASP ALA VAL MSE HIS GLN ARG LEU THR ALA SEQRES 7 A 185 LEU PRO THR PHE ALA VAL SER VAL LEU GLU ALA GLY GLN SEQRES 8 A 185 GLU LYS ALA ALA ARG HIS PHE ALA ASP HIS SER ARG PRO SEQRES 9 A 185 PRO GLY VAL ASP GLN PHE ASP THR VAL ASP TRP VAL LEU SEQRES 10 A 185 GLY GLU GLU SER GLY ALA PRO LEU ILE ALA GLY ALA VAL SEQRES 11 A 185 ALA HIS LEU GLU CYS ALA ILE HIS ARG LEU TYR GLU GLY SEQRES 12 A 185 GLY ASP HIS THR ILE PHE LEU GLY GLU VAL ILE THR ALA SEQRES 13 A 185 THR ARG TRP PRO ALA ARG GLU GLY MSE LEU PHE SER GLY SEQRES 14 A 185 GLY ARG PHE ARG ARG PHE ALA PRO ASP ALA ASP GLU GLY SEQRES 15 A 185 ARG ALA ALA SEQRES 1 B 185 SER ASN ALA MSE SER PRO ILE ILE ALA PRO PRO ALA GLU SEQRES 2 B 185 LEU VAL ASP PRO LYS ASP ARG VAL GLN LEU ARG ARG VAL SEQRES 3 B 185 PHE GLY ASP PHE PRO THR GLY VAL THR VAL VAL THR VAL SEQRES 4 B 185 GLY GLY SER GLU PRO ARG GLY MSE THR ALA ASN SER PHE SEQRES 5 B 185 THR SER VAL SER LEU SER PRO PRO LEU VAL LEU ILE CYS SEQRES 6 B 185 VAL GLY LYS ASP ALA VAL MSE HIS GLN ARG LEU THR ALA SEQRES 7 B 185 LEU PRO THR PHE ALA VAL SER VAL LEU GLU ALA GLY GLN SEQRES 8 B 185 GLU LYS ALA ALA ARG HIS PHE ALA ASP HIS SER ARG PRO SEQRES 9 B 185 PRO GLY VAL ASP GLN PHE ASP THR VAL ASP TRP VAL LEU SEQRES 10 B 185 GLY GLU GLU SER GLY ALA PRO LEU ILE ALA GLY ALA VAL SEQRES 11 B 185 ALA HIS LEU GLU CYS ALA ILE HIS ARG LEU TYR GLU GLY SEQRES 12 B 185 GLY ASP HIS THR ILE PHE LEU GLY GLU VAL ILE THR ALA SEQRES 13 B 185 THR ARG TRP PRO ALA ARG GLU GLY MSE LEU PHE SER GLY SEQRES 14 B 185 GLY ARG PHE ARG ARG PHE ALA PRO ASP ALA ASP GLU GLY SEQRES 15 B 185 ARG ALA ALA MODRES 4R82 MSE A 44 MET SELENOMETHIONINE MODRES 4R82 MSE A 69 MET SELENOMETHIONINE MODRES 4R82 MSE A 162 MET SELENOMETHIONINE MODRES 4R82 MSE B 44 MET SELENOMETHIONINE MODRES 4R82 MSE B 69 MET SELENOMETHIONINE MODRES 4R82 MSE B 162 MET SELENOMETHIONINE HET MSE A 44 8 HET MSE A 69 8 HET MSE A 162 8 HET MSE B 44 8 HET MSE B 69 8 HET MSE B 162 8 HET NAD A 201 23 HET NAD A 202 23 HET CA A 203 1 HET CL A 204 1 HET ACT A 205 4 HET ACT A 206 4 HET ACT A 207 4 HET MG A 208 1 HET FAD A 209 31 HET NAD B 201 23 HET NAD B 202 23 HET CA B 203 1 HET CA B 204 1 HET CL B 205 1 HET ACT B 206 4 HET FAD B 207 31 HETNAM MSE SELENOMETHIONINE HETNAM NAD NICOTINAMIDE-ADENINE-DINUCLEOTIDE HETNAM CA CALCIUM ION HETNAM CL CHLORIDE ION HETNAM ACT ACETATE ION HETNAM MG MAGNESIUM ION HETNAM FAD FLAVIN-ADENINE DINUCLEOTIDE FORMUL 1 MSE 6(C5 H11 N O2 SE) FORMUL 3 NAD 4(C21 H27 N7 O14 P2) FORMUL 5 CA 3(CA 2+) FORMUL 6 CL 2(CL 1-) FORMUL 7 ACT 4(C2 H3 O2 1-) FORMUL 10 MG MG 2+ FORMUL 11 FAD 2(C27 H33 N9 O15 P2) FORMUL 19 HOH *236(H2 O) HELIX 1 1 ASP A 16 GLY A 25 1 10 HELIX 2 2 ALA A 67 LEU A 76 1 10 HELIX 3 3 GLN A 88 PHE A 95 1 8 HELIX 4 4 ASP B 16 GLY B 25 1 10 HELIX 5 5 ALA B 67 LEU B 76 1 10 HELIX 6 6 GLN B 88 PHE B 95 1 8 SHEET 1 A 6 GLU A 10 VAL A 12 0 SHEET 2 A 6 HIS B 143 ARG B 155 -1 O ALA B 153 N VAL A 12 SHEET 3 A 6 ALA B 128 GLY B 140 -1 N HIS B 135 O LEU B 147 SHEET 4 A 6 THR B 78 VAL B 83 -1 N PHE B 79 O CYS B 132 SHEET 5 A 6 THR B 32 VAL B 36 -1 N THR B 35 O ALA B 80 SHEET 6 A 6 ARG B 42 ALA B 46 -1 O MSE B 44 N VAL B 34 SHEET 1 B 4 GLU A 10 VAL A 12 0 SHEET 2 B 4 HIS B 143 ARG B 155 -1 O ALA B 153 N VAL A 12 SHEET 3 B 4 LEU B 58 GLY B 64 -1 N VAL B 59 O GLY B 148 SHEET 4 B 4 THR B 50 SER B 53 -1 N VAL B 52 O LEU B 58 SHEET 1 C 7 ARG A 42 ALA A 46 0 SHEET 2 C 7 THR A 32 VAL A 36 -1 N VAL A 34 O MSE A 44 SHEET 3 C 7 THR A 78 VAL A 83 -1 O ALA A 80 N THR A 35 SHEET 4 C 7 ALA A 128 GLY A 140 -1 O CYS A 132 N PHE A 79 SHEET 5 C 7 HIS A 143 ARG A 155 -1 O LEU A 147 N HIS A 135 SHEET 6 C 7 LEU A 58 GLY A 64 -1 N ILE A 61 O PHE A 146 SHEET 7 C 7 THR A 50 SER A 53 -1 N VAL A 52 O LEU A 58 SHEET 1 D 6 ARG A 42 ALA A 46 0 SHEET 2 D 6 THR A 32 VAL A 36 -1 N VAL A 34 O MSE A 44 SHEET 3 D 6 THR A 78 VAL A 83 -1 O ALA A 80 N THR A 35 SHEET 4 D 6 ALA A 128 GLY A 140 -1 O CYS A 132 N PHE A 79 SHEET 5 D 6 HIS A 143 ARG A 155 -1 O LEU A 147 N HIS A 135 SHEET 6 D 6 GLU B 10 VAL B 12 -1 O GLU B 10 N ARG A 155 SHEET 1 E 2 TRP A 112 LEU A 114 0 SHEET 2 E 2 PRO A 121 ILE A 123 -1 O LEU A 122 N VAL A 113 SHEET 1 F 2 LEU A 163 SER A 165 0 SHEET 2 F 2 ARG A 168 ARG A 170 -1 O ARG A 168 N SER A 165 SHEET 1 G 2 TRP B 112 LEU B 114 0 SHEET 2 G 2 PRO B 121 ILE B 123 -1 O LEU B 122 N VAL B 113 SHEET 1 H 2 LEU B 163 SER B 165 0 SHEET 2 H 2 ARG B 168 ARG B 170 -1 O ARG B 168 N SER B 165 LINK C GLY A 43 N MSE A 44 1555 1555 1.33 LINK C MSE A 44 N THR A 45 1555 1555 1.33 LINK C VAL A 68 N MSE A 69 1555 1555 1.33 LINK C MSE A 69 N HIS A 70 1555 1555 1.33 LINK C GLY A 161 N MSE A 162 1555 1555 1.33 LINK C MSE A 162 N LEU A 163 1555 1555 1.33 LINK C GLY B 43 N MSE B 44 1555 1555 1.33 LINK C MSE B 44 N THR B 45 1555 1555 1.32 LINK C VAL B 68 N MSE B 69 1555 1555 1.33 LINK C MSE B 69 N HIS B 70 1555 1555 1.33 LINK C GLY B 161 N MSE B 162 1555 1555 1.33 LINK C MSE B 162 N LEU B 163 1555 1555 1.33 LINK OD2 ASP A 16 CA CA A 203 1555 1555 2.27 LINK OG1 THR A 50 MG MG A 208 1555 1555 2.57 LINK CA CA A 203 O HOH A 350 1555 1555 2.35 LINK CA CA A 203 O HOH A 365 1555 1555 2.52 LINK O ACT A 205 CA CA B 204 1555 1555 2.58 LINK MG MG A 208 O HOH A 306 1555 1555 2.16 LINK MG MG A 208 OG1 THR B 50 1555 1555 2.58 LINK MG MG A 208 O HOH B 425 1555 1555 2.10 LINK O HOH A 328 CA CA B 204 1555 1555 2.51 LINK O HOH A 411 CA CA B 204 1555 1555 2.38 LINK OD2 ASP B 16 CA CA B 203 1555 1555 2.24 LINK O PRO B 157 CA CA B 204 1555 1555 2.42 LINK O ARG B 159 CA CA B 204 1555 1555 2.37 LINK CA CA B 203 O HOH B 324 1555 1555 2.44 LINK CA CA B 203 O HOH B 374 1555 1555 2.37 LINK CA CA B 203 O HOH B 397 1555 1555 2.40 LINK CA CA B 203 O HOH B 399 1555 1555 2.43 LINK CA CA B 204 O HOH B 311 1555 1555 2.36 LINK CA CA B 204 O HOH B 400 1555 1555 2.32 CISPEP 1 SER A 55 PRO A 56 0 -2.13 CISPEP 2 SER A 55 PRO A 56 0 -2.72 CISPEP 3 SER B 55 PRO B 56 0 -1.84 CISPEP 4 SER B 55 PRO B 56 0 -2.59 SITE 1 AC1 16 ARG A 21 PHE A 24 GLY A 25 ASN A 47 SITE 2 AC1 16 HIS A 143 GLY A 167 NAD A 202 HOH A 307 SITE 3 AC1 16 HOH A 322 HOH A 375 HOH A 381 HOH A 392 SITE 4 AC1 16 HOH A 395 LEU B 54 HOH B 361 HOH B 374 SITE 1 AC2 13 ARG A 21 HIS A 143 NAD A 201 FAD A 209 SITE 2 AC2 13 HOH A 307 HOH A 375 ASP B 16 CA B 203 SITE 3 AC2 13 HOH B 308 HOH B 361 HOH B 374 HOH B 397 SITE 4 AC2 13 HOH B 399 SITE 1 AC3 6 ASP A 16 HOH A 350 HOH A 365 NAD B 202 SITE 2 AC3 6 HOH B 353 HOH B 398 SITE 1 AC4 4 ARG A 17 ARG A 21 ARG B 17 LEU B 54 SITE 1 AC5 8 SER A 165 GLY A 166 ARG A 170 HOH A 328 SITE 2 AC5 8 ARG B 159 GLU B 160 CA B 204 HOH B 311 SITE 1 AC6 3 GLN A 88 LYS A 90 ALA A 91 SITE 1 AC7 4 GLU A 139 GLY A 141 HIS B 135 ARG B 136 SITE 1 AC8 6 PHE A 49 THR A 50 HOH A 306 PHE B 49 SITE 2 AC8 6 THR B 50 HOH B 425 SITE 1 AC9 15 MSE A 44 THR A 45 ALA A 46 ASN A 47 SITE 2 AC9 15 SER A 48 CYS A 62 VAL A 63 GLY A 64 SITE 3 AC9 15 ALA A 67 ALA A 96 HIS A 98 PHE A 164 SITE 4 AC9 15 NAD A 202 HOH A 310 HOH A 335 SITE 1 BC1 13 LEU A 54 HOH A 380 ARG B 21 PHE B 24 SITE 2 BC1 13 ASN B 47 HIS B 143 GLY B 167 NAD B 202 SITE 3 BC1 13 HOH B 310 HOH B 338 HOH B 375 HOH B 389 SITE 4 BC1 13 HOH B 398 SITE 1 BC2 11 ASP A 16 CA A 203 HOH A 350 ARG B 21 SITE 2 BC2 11 HIS B 143 NAD B 201 FAD B 207 HOH B 353 SITE 3 BC2 11 HOH B 398 HOH B 409 HOH B 420 SITE 1 BC3 6 NAD A 202 ASP B 16 HOH B 324 HOH B 374 SITE 2 BC3 6 HOH B 397 HOH B 399 SITE 1 BC4 7 ACT A 205 HOH A 328 HOH A 411 PRO B 157 SITE 2 BC4 7 ARG B 159 HOH B 311 HOH B 400 SITE 1 BC5 4 ARG A 17 LEU A 54 ARG B 17 ARG B 21 SITE 1 BC6 5 LEU B 122 HIS B 129 THR B 154 TRP B 156 SITE 2 BC6 5 HOH B 331 SITE 1 BC7 16 MSE B 44 THR B 45 ALA B 46 ASN B 47 SITE 2 BC7 16 SER B 48 CYS B 62 VAL B 63 GLY B 64 SITE 3 BC7 16 ALA B 67 VAL B 68 ALA B 96 PHE B 164 SITE 4 BC7 16 NAD B 202 HOH B 371 HOH B 373 HOH B 391 CRYST1 42.046 62.830 70.089 90.00 92.06 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.023783 0.000000 0.000855 0.00000 SCALE2 0.000000 0.015916 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014277 0.00000