HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 02-SEP-14 4R8O TITLE CRYSTAL STRUCTURE OF A DUF3836 FAMILY PROTEIN (BVU_1206) FROM TITLE 2 BACTEROIDES VULGATUS ATCC 8482 AT 2.50 A RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: UNCHARACTERIZED PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACTEROIDES VULGATUS; SOURCE 3 ORGANISM_TAXID: 435590; SOURCE 4 STRAIN: ATCC 8482; SOURCE 5 GENE: BVU_1206; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: PB1; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: SPEEDET KEYWDS PF12930 FAMILY (DUF3836), SINGLE LAYER BETA SHEET PROTEIN, STRUCTURAL KEYWDS 2 GENOMICS, JOINT CENTER FOR STRUCTURAL GENOMICS, JCSG, PROTEIN KEYWDS 3 STRUCTURE INITIATIVE, PSI-BIOLOGY, UNKNOWN FUNCTION EXPDTA X-RAY DIFFRACTION AUTHOR JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) REVDAT 6 01-FEB-23 4R8O 1 SEQADV REVDAT 5 22-APR-20 4R8O 1 JRNL LINK REVDAT 4 24-JAN-18 4R8O 1 JRNL REVDAT 3 22-NOV-17 4R8O 1 REMARK REVDAT 2 24-DEC-14 4R8O 1 TITLE REVDAT 1 17-SEP-14 4R8O 0 JRNL AUTH Q.XU,M.BIANCALANA,J.C.GRANT,H.J.CHIU,L.JAROSZEWSKI, JRNL AUTH 2 M.W.KNUTH,S.A.LESLEY,A.GODZIK,M.A.ELSLIGER,A.M.DEACON, JRNL AUTH 3 I.A.WILSON JRNL TITL STRUCTURES OF SINGLE-LAYER BETA-SHEET PROTEINS EVOLVED FROM JRNL TITL 2 BETA-HAIRPIN REPEATS. JRNL REF PROTEIN SCI. V. 28 1676 2019 JRNL REFN ESSN 1469-896X JRNL PMID 31306512 JRNL DOI 10.1002/PRO.3683 REMARK 2 REMARK 2 RESOLUTION. 2.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0073 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 49.04 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 3 NUMBER OF REFLECTIONS : 17387 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.180 REMARK 3 R VALUE (WORKING SET) : 0.177 REMARK 3 FREE R VALUE : 0.244 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 881 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.50 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.57 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1150 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 94.59 REMARK 3 BIN R VALUE (WORKING SET) : 0.4120 REMARK 3 BIN FREE R VALUE SET COUNT : 56 REMARK 3 BIN FREE R VALUE : 0.4560 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1648 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 17 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 84.85 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 79.48 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -41.18000 REMARK 3 B22 (A**2) : -41.18000 REMARK 3 B33 (A**2) : 82.36000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.039 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.042 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.114 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 10.521 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.963 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.922 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1682 ; 0.012 ; 0.020 REMARK 3 BOND LENGTHS OTHERS (A): 1532 ; 0.006 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2270 ; 1.707 ; 1.944 REMARK 3 BOND ANGLES OTHERS (DEGREES): 3524 ; 1.464 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 194 ; 6.113 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 92 ;34.512 ;25.652 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 280 ;13.753 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 6 ;15.678 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 236 ; 0.100 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1916 ; 0.008 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 406 ; 0.005 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 782 ; 4.181 ; 6.282 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 781 ; 4.182 ; 6.278 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 974 ; 6.423 ; 9.410 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TWIN DETAILS REMARK 3 NUMBER OF TWIN DOMAINS : 2 REMARK 3 TWIN DOMAIN : 1 REMARK 3 TWIN OPERATOR : H, K, L REMARK 3 TWIN FRACTION : 0.499 REMARK 3 TWIN DOMAIN : 2 REMARK 3 TWIN OPERATOR : -H,-K,L REMARK 3 TWIN FRACTION : 0.501 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 30 A 127 REMARK 3 ORIGIN FOR THE GROUP (A): 23.9218 40.4730 10.2369 REMARK 3 T TENSOR REMARK 3 T11: 0.2121 T22: 0.1479 REMARK 3 T33: 0.0054 T12: 0.0854 REMARK 3 T13: -0.0202 T23: -0.0031 REMARK 3 L TENSOR REMARK 3 L11: 0.6237 L22: 1.0371 REMARK 3 L33: 0.9903 L12: -0.1264 REMARK 3 L13: -0.0987 L23: 0.4750 REMARK 3 S TENSOR REMARK 3 S11: -0.1819 S12: -0.0651 S13: -0.0053 REMARK 3 S21: 0.1337 S22: 0.2029 S23: 0.0085 REMARK 3 S31: -0.0089 S32: -0.0145 S33: -0.0210 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 30 B 127 REMARK 3 ORIGIN FOR THE GROUP (A): 32.1121 24.1428 19.3875 REMARK 3 T TENSOR REMARK 3 T11: 0.3129 T22: 0.1088 REMARK 3 T33: 0.0185 T12: 0.1531 REMARK 3 T13: 0.0003 T23: 0.0099 REMARK 3 L TENSOR REMARK 3 L11: 2.2859 L22: 2.1168 REMARK 3 L33: 0.8805 L12: -1.5999 REMARK 3 L13: 0.3152 L23: -0.1836 REMARK 3 S TENSOR REMARK 3 S11: -0.2035 S12: -0.2029 S13: -0.0616 REMARK 3 S21: 0.3700 S22: 0.2123 S23: -0.0776 REMARK 3 S31: 0.0454 S32: -0.0603 S33: -0.0087 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: 1. HYDROGENS HAVE BEEN ADDED IN THE REMARK 3 RIDING POSITIONS. 2. A MET-INHIBITION PROTOCOL WAS USED FOR REMARK 3 SELENOMETHIONINE INCORPORATION DURING PROTEIN EXPRESSION. THE REMARK 3 OCCUPANCY OF THE SE ATOMS IN THE MSE RESIDUES WAS REDUCED TO REMARK 3 0.75 FOR THE REDUCED SCATTERING POWER DUE TO PARTIAL S-MET REMARK 3 INCORPORATION. 3.ATOM RECORD CONTAINS SUM OF TLS AND RESIDUAL B REMARK 3 FACTORS. 4.ANISOU RECORD CONTAINS SUM OF TLS AND RESIDUAL U REMARK 3 FACTORS. 5.WATERS WERE EXCLUDED FROM AUTOMATIC TLS ASSIGNMENT. REMARK 4 REMARK 4 4R8O COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 04-SEP-14. REMARK 100 THE DEPOSITION ID IS D_1000087038. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 26-JUN-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL11-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97905 REMARK 200 MONOCHROMATOR : SINGLE CRYSTAL SI(111) BENT REMARK 200 OPTICS : FLAT MIRROR (VERTICAL FOCUSING); REMARK 200 SINGLE CRYSTAL SI(111) BENT REMARK 200 MONOCHROMATOR (HORIZONTAL REMARK 200 FOCUSING) REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE JANUARY 10, 2014 REMARK 200 BUILT=20140307 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 17436 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.500 REMARK 200 RESOLUTION RANGE LOW (A) : 49.040 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 200 DATA REDUNDANCY : 9.790 REMARK 200 R MERGE (I) : 0.08700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 16.0600 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.57 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.3 REMARK 200 DATA REDUNDANCY IN SHELL : 8.92 REMARK 200 R MERGE FOR SHELL (I) : 2.43900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 0.750 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.3.0 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 74.94 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.91 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 25.0% GLYCEROL 1.50M AMMONIUM SULFATE, REMARK 280 NANODROP, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+2/3 REMARK 290 6555 -X,-X+Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 29.74667 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 59.49333 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 59.49333 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 29.74667 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: CRYSTAL PACKING ANALYSIS SUGGESTS THE ASSIGNMENT OF A REMARK 300 MONOMER AS THE SIGNIFICANT OLIGOMERIZATION STATE. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1610 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 13040 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -16.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 0 REMARK 465 GLY A 26 REMARK 465 ASN A 27 REMARK 465 PRO A 28 REMARK 465 GLY A 29 REMARK 465 LYS A 128 REMARK 465 GLY B 0 REMARK 465 GLY B 26 REMARK 465 ASN B 27 REMARK 465 PRO B 28 REMARK 465 GLY B 29 REMARK 465 LYS B 128 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASP A 30 CG OD1 OD2 REMARK 470 ASP B 30 CG OD1 OD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 MSE A 60 CG - SE - CE ANGL. DEV. = -16.1 DEGREES REMARK 500 MSE B 60 CG - SE - CE ANGL. DEV. = -20.6 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR A 59 -54.47 -129.61 REMARK 500 ASP A 75 83.99 -156.87 REMARK 500 ASN A 90 -74.55 -133.93 REMARK 500 TYR B 59 -58.47 -128.71 REMARK 500 ASP B 75 85.02 -155.65 REMARK 500 ASN B 90 -76.45 -136.41 REMARK 500 LYS B 114 41.34 73.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: JCSG-419456 RELATED DB: TARGETTRACK REMARK 999 REMARK 999 SEQUENCE REMARK 999 THIS CONSTRUCT WAS EXPRESSED WITH AN N-TERMINAL PURIFICATION TAG REMARK 999 MGSDKIHHHHHHENLYFQG. THE TAG WAS REMOVED WITH TEV PROTEASE LEAVING REMARK 999 ONLY A GLYCINE (0) FOLLOWED BY RESIDUES 26-128 OF THE TARGET REMARK 999 SEQUENCE. DBREF 4R8O A 26 128 UNP A6KZN2 A6KZN2_BACV8 26 128 DBREF 4R8O B 26 128 UNP A6KZN2 A6KZN2_BACV8 26 128 SEQADV 4R8O GLY A 0 UNP A6KZN2 EXPRESSION TAG SEQADV 4R8O GLY B 0 UNP A6KZN2 EXPRESSION TAG SEQRES 1 A 104 GLY GLY ASN PRO GLY ASP ASN LEU ILE TYR ASN ALA GLU SEQRES 2 A 104 GLU VAL ASN GLY VAL VAL VAL SER GLU THR ILE PHE LYS SEQRES 3 A 104 MSE GLU GLY THR MSE LEU THR ASN TYR MSE LYS HIS ASN SEQRES 4 A 104 TYR LYS TYR ASP ALA ASN ASN GLN ARG THR GLU ASP GLU SEQRES 5 A 104 ALA GLN LYS TRP ASN SER ASN LYS ASN ARG TRP GLU ASN SEQRES 6 A 104 ASN LEU CYS ILE ARG TYR THR TYR GLY ASN LYS SER MSE SEQRES 7 A 104 THR THR GLU TYR TYR LYS TRP ASN SER LYS LYS LYS GLU SEQRES 8 A 104 TYR ILE LEU VAL PRO GLU MSE THR VAL THR MSE ASP LYS SEQRES 1 B 104 GLY GLY ASN PRO GLY ASP ASN LEU ILE TYR ASN ALA GLU SEQRES 2 B 104 GLU VAL ASN GLY VAL VAL VAL SER GLU THR ILE PHE LYS SEQRES 3 B 104 MSE GLU GLY THR MSE LEU THR ASN TYR MSE LYS HIS ASN SEQRES 4 B 104 TYR LYS TYR ASP ALA ASN ASN GLN ARG THR GLU ASP GLU SEQRES 5 B 104 ALA GLN LYS TRP ASN SER ASN LYS ASN ARG TRP GLU ASN SEQRES 6 B 104 ASN LEU CYS ILE ARG TYR THR TYR GLY ASN LYS SER MSE SEQRES 7 B 104 THR THR GLU TYR TYR LYS TRP ASN SER LYS LYS LYS GLU SEQRES 8 B 104 TYR ILE LEU VAL PRO GLU MSE THR VAL THR MSE ASP LYS MODRES 4R8O MSE A 51 MET SELENOMETHIONINE MODRES 4R8O MSE A 55 MET SELENOMETHIONINE MODRES 4R8O MSE A 60 MET SELENOMETHIONINE MODRES 4R8O MSE A 102 MET SELENOMETHIONINE MODRES 4R8O MSE A 122 MET SELENOMETHIONINE MODRES 4R8O MSE A 126 MET SELENOMETHIONINE MODRES 4R8O MSE B 51 MET SELENOMETHIONINE MODRES 4R8O MSE B 55 MET SELENOMETHIONINE MODRES 4R8O MSE B 60 MET SELENOMETHIONINE MODRES 4R8O MSE B 102 MET SELENOMETHIONINE MODRES 4R8O MSE B 122 MET SELENOMETHIONINE MODRES 4R8O MSE B 126 MET SELENOMETHIONINE HET MSE A 51 8 HET MSE A 55 8 HET MSE A 60 8 HET MSE A 102 8 HET MSE A 122 8 HET MSE A 126 8 HET MSE B 51 8 HET MSE B 55 8 HET MSE B 60 8 HET MSE B 102 8 HET MSE B 122 8 HET MSE B 126 8 HETNAM MSE SELENOMETHIONINE FORMUL 1 MSE 12(C5 H11 N O2 SE) FORMUL 3 HOH *17(H2 O) HELIX 1 1 PRO B 120 THR B 123 5 4 SHEET 1 A 7 LEU A 32 VAL A 39 0 SHEET 2 A 7 VAL A 42 GLU A 52 -1 O THR A 47 N ASN A 35 SHEET 3 A 7 MSE A 55 TYR A 66 -1 O MSE A 60 N ILE A 48 SHEET 4 A 7 ARG A 72 ASN A 81 -1 O THR A 73 N LYS A 65 SHEET 5 A 7 ARG A 86 TYR A 97 -1 O GLU A 88 N LYS A 79 SHEET 6 A 7 MSE A 102 ASN A 110 -1 O THR A 103 N THR A 96 SHEET 7 A 7 GLU A 115 LEU A 118 -1 O ILE A 117 N LYS A 108 SHEET 1 B 7 LEU A 32 VAL A 39 0 SHEET 2 B 7 VAL A 42 GLU A 52 -1 O THR A 47 N ASN A 35 SHEET 3 B 7 MSE A 55 TYR A 66 -1 O MSE A 60 N ILE A 48 SHEET 4 B 7 ARG A 72 ASN A 81 -1 O THR A 73 N LYS A 65 SHEET 5 B 7 ARG A 86 TYR A 97 -1 O GLU A 88 N LYS A 79 SHEET 6 B 7 MSE A 102 ASN A 110 -1 O THR A 103 N THR A 96 SHEET 7 B 7 VAL A 124 MSE A 126 -1 O MSE A 126 N MSE A 102 SHEET 1 C 7 ILE B 33 VAL B 39 0 SHEET 2 C 7 VAL B 42 GLU B 52 -1 O SER B 45 N GLU B 37 SHEET 3 C 7 MSE B 55 TYR B 66 -1 O MSE B 60 N ILE B 48 SHEET 4 C 7 ARG B 72 ASN B 81 -1 O THR B 73 N LYS B 65 SHEET 5 C 7 ARG B 86 TYR B 97 -1 O ARG B 86 N ASN B 81 SHEET 6 C 7 MSE B 102 ASN B 110 -1 O THR B 103 N THR B 96 SHEET 7 C 7 GLU B 115 LEU B 118 -1 O ILE B 117 N LYS B 108 SHEET 1 D 7 ILE B 33 VAL B 39 0 SHEET 2 D 7 VAL B 42 GLU B 52 -1 O SER B 45 N GLU B 37 SHEET 3 D 7 MSE B 55 TYR B 66 -1 O MSE B 60 N ILE B 48 SHEET 4 D 7 ARG B 72 ASN B 81 -1 O THR B 73 N LYS B 65 SHEET 5 D 7 ARG B 86 TYR B 97 -1 O ARG B 86 N ASN B 81 SHEET 6 D 7 MSE B 102 ASN B 110 -1 O THR B 103 N THR B 96 SHEET 7 D 7 VAL B 124 MSE B 126 -1 O MSE B 126 N MSE B 102 LINK C LYS A 50 N MSE A 51 1555 1555 1.33 LINK C MSE A 51 N GLU A 52 1555 1555 1.33 LINK C THR A 54 N MSE A 55 1555 1555 1.33 LINK C MSE A 55 N LEU A 56 1555 1555 1.33 LINK C TYR A 59 N MSE A 60 1555 1555 1.33 LINK C MSE A 60 N LYS A 61 1555 1555 1.33 LINK C SER A 101 N MSE A 102 1555 1555 1.33 LINK C MSE A 102 N THR A 103 1555 1555 1.33 LINK C GLU A 121 N MSE A 122 1555 1555 1.33 LINK C MSE A 122 N THR A 123 1555 1555 1.34 LINK C THR A 125 N MSE A 126 1555 1555 1.34 LINK C MSE A 126 N ASP A 127 1555 1555 1.33 LINK C LYS B 50 N MSE B 51 1555 1555 1.33 LINK C MSE B 51 N GLU B 52 1555 1555 1.33 LINK C THR B 54 N MSE B 55 1555 1555 1.33 LINK C MSE B 55 N LEU B 56 1555 1555 1.33 LINK C TYR B 59 N MSE B 60 1555 1555 1.33 LINK C MSE B 60 N LYS B 61 1555 1555 1.34 LINK C SER B 101 N MSE B 102 1555 1555 1.34 LINK C MSE B 102 N THR B 103 1555 1555 1.33 LINK C GLU B 121 N MSE B 122 1555 1555 1.33 LINK C MSE B 122 N THR B 123 1555 1555 1.33 LINK C THR B 125 N MSE B 126 1555 1555 1.32 LINK C MSE B 126 N ASP B 127 1555 1555 1.33 CRYST1 98.080 98.080 89.240 90.00 90.00 120.00 P 31 2 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010196 0.005887 0.000000 0.00000 SCALE2 0.000000 0.011773 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011206 0.00000