HEADER HYDROLASE 09-SEP-14 4RA6 TITLE CRYSTAL STRUCTURE OF LINKER LESS PYROCOCCUS FURIOSUS L-ASPARAGINASE COMPND MOL_ID: 1; COMPND 2 MOLECULE: L-ASPARAGINASE; COMPND 3 CHAIN: A, P; COMPND 4 FRAGMENT: UNP RESIDUES 1-182; COMPND 5 EC: 3.5.1.1; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: L-ASPARAGINASE; COMPND 9 CHAIN: B, Q; COMPND 10 FRAGMENT: UNP RESIDUES 202-326; COMPND 11 EC: 3.5.1.1; COMPND 12 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PYROCOCCUS FURIOSUS DSM 3638; SOURCE 3 ORGANISM_TAXID: 186497; SOURCE 4 GENE: PF2047, PH0066; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: ROSETTA (DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET-28A; SOURCE 10 MOL_ID: 2; SOURCE 11 ORGANISM_SCIENTIFIC: PYROCOCCUS FURIOSUS DSM 3638; SOURCE 12 ORGANISM_TAXID: 186497; SOURCE 13 GENE: PF2047, PH0066; SOURCE 14 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 15 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 16 EXPRESSION_SYSTEM_STRAIN: ROSETTA (DE3); SOURCE 17 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 18 EXPRESSION_SYSTEM_PLASMID: PET-28A KEYWDS HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR P.SHARMA,R.TOMAR,ASHISH,B.KUNDU REVDAT 3 08-NOV-23 4RA6 1 REMARK REVDAT 2 01-JAN-20 4RA6 1 JRNL REMARK SEQADV REVDAT 1 10-DEC-14 4RA6 0 JRNL AUTH R.TOMAR,P.SHARMA,A.SRIVASTAVA,S.BANSAL,B.KUNDU JRNL TITL STRUCTURAL AND FUNCTIONAL INSIGHTS INTO AN ARCHAEAL JRNL TITL 2 L-ASPARAGINASE OBTAINED THROUGH THE LINKER-LESS ASSEMBLY OF JRNL TITL 3 CONSTITUENT DOMAINS. JRNL REF ACTA CRYSTALLOGR.,SECT.D V. 70 3187 2014 JRNL REFN ESSN 1399-0047 JRNL PMID 25478837 JRNL DOI 10.1107/S1399004714023414 REMARK 2 REMARK 2 RESOLUTION. 2.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.7.3_928) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 37.95 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 95.6 REMARK 3 NUMBER OF REFLECTIONS : 19023 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.197 REMARK 3 R VALUE (WORKING SET) : 0.193 REMARK 3 FREE R VALUE : 0.264 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.180 REMARK 3 FREE R VALUE TEST SET COUNT : 986 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 37.9488 - 4.7848 1.00 2730 136 0.1847 0.2024 REMARK 3 2 4.7848 - 3.7990 1.00 2694 151 0.1676 0.2589 REMARK 3 3 3.7990 - 3.3191 1.00 2689 154 0.1875 0.3056 REMARK 3 4 3.3191 - 3.0158 1.00 2681 145 0.2076 0.2690 REMARK 3 5 3.0158 - 2.7997 0.98 2590 156 0.2195 0.3112 REMARK 3 6 2.7997 - 2.6347 0.91 2479 131 0.2421 0.3019 REMARK 3 7 2.6347 - 2.5028 0.80 2174 113 0.2563 0.3490 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.00 REMARK 3 SHRINKAGE RADIUS : 0.73 REMARK 3 K_SOL : 0.37 REMARK 3 B_SOL : 61.50 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.380 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 29.500 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 44.52 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 50.94 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -8.89820 REMARK 3 B22 (A**2) : -8.89820 REMARK 3 B33 (A**2) : 17.79630 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 4724 REMARK 3 ANGLE : 1.161 6387 REMARK 3 CHIRALITY : 0.069 771 REMARK 3 PLANARITY : 0.005 801 REMARK 3 DIHEDRAL : 14.851 1758 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4RA6 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 18-SEP-14. REMARK 100 THE DEPOSITION ID IS D_1000087092. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 25-MAY-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : BRUKER AXS MICROSTAR-H REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : MIRRORS REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MAR SCANNER 345 MM PLATE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 19946 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.500 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.6 REMARK 200 DATA REDUNDANCY : 4.600 REMARK 200 R MERGE (I) : 0.12600 REMARK 200 R SYM (I) : 0.12600 REMARK 200 FOR THE DATA SET : 13.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.54 REMARK 200 COMPLETENESS FOR SHELL (%) : 76.6 REMARK 200 DATA REDUNDANCY IN SHELL : 3.70 REMARK 200 R MERGE FOR SHELL (I) : 0.76200 REMARK 200 R SYM FOR SHELL (I) : 0.76200 REMARK 200 FOR SHELL : 1.530 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASES REMARK 200 STARTING MODEL: 1WLS REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 35.88 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.92 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 15%(V/V) REAGENT AKCOHOL, 100MM REMARK 280 IMIDAZOLE/HCL, 200MM MGCL2, PH 7.5, VAPOR DIFFUSION, HANGING REMARK 280 DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y,X,Z+1/4 REMARK 290 4555 Y,-X,Z+3/4 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 77.96700 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 38.98350 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 116.95050 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2060 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 13480 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -15.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1960 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 13530 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -16.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: P, Q REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -21 REMARK 465 GLY A -20 REMARK 465 SER A -19 REMARK 465 SER A -18 REMARK 465 HIS A -17 REMARK 465 HIS A -16 REMARK 465 HIS A -15 REMARK 465 HIS A -14 REMARK 465 HIS A -13 REMARK 465 HIS A -12 REMARK 465 SER A -11 REMARK 465 SER A -10 REMARK 465 GLY A -9 REMARK 465 LEU A -8 REMARK 465 VAL A -7 REMARK 465 PRO A -6 REMARK 465 ARG A -5 REMARK 465 GLY A -4 REMARK 465 SER A -3 REMARK 465 HIS A -2 REMARK 465 MET A -1 REMARK 465 ALA A 0 REMARK 465 LYS A 16 REMARK 465 GLY A 17 REMARK 465 GLU A 18 REMARK 465 ASN A 19 REMARK 465 GLY A 20 REMARK 465 MET B 180 REMARK 465 GLY B 181 REMARK 465 SER B 182 REMARK 465 SER B 183 REMARK 465 HIS B 184 REMARK 465 HIS B 185 REMARK 465 HIS B 186 REMARK 465 HIS B 187 REMARK 465 HIS B 188 REMARK 465 HIS B 189 REMARK 465 SER B 190 REMARK 465 SER B 191 REMARK 465 GLY B 192 REMARK 465 LEU B 193 REMARK 465 VAL B 194 REMARK 465 PRO B 195 REMARK 465 ARG B 196 REMARK 465 GLY B 197 REMARK 465 SER B 198 REMARK 465 HIS B 199 REMARK 465 TYR B 273 REMARK 465 LYS B 274 REMARK 465 MET P -21 REMARK 465 GLY P -20 REMARK 465 SER P -19 REMARK 465 SER P -18 REMARK 465 HIS P -17 REMARK 465 HIS P -16 REMARK 465 HIS P -15 REMARK 465 HIS P -14 REMARK 465 HIS P -13 REMARK 465 HIS P -12 REMARK 465 SER P -11 REMARK 465 SER P -10 REMARK 465 GLY P -9 REMARK 465 LEU P -8 REMARK 465 VAL P -7 REMARK 465 PRO P -6 REMARK 465 ARG P -5 REMARK 465 GLY P -4 REMARK 465 SER P -3 REMARK 465 HIS P -2 REMARK 465 MET P -1 REMARK 465 ALA P 0 REMARK 465 GLY P 17 REMARK 465 GLU P 18 REMARK 465 ASN P 19 REMARK 465 GLY P 20 REMARK 465 MET Q 180 REMARK 465 GLY Q 181 REMARK 465 SER Q 182 REMARK 465 SER Q 183 REMARK 465 HIS Q 184 REMARK 465 HIS Q 185 REMARK 465 HIS Q 186 REMARK 465 HIS Q 187 REMARK 465 HIS Q 188 REMARK 465 HIS Q 189 REMARK 465 SER Q 190 REMARK 465 SER Q 191 REMARK 465 GLY Q 192 REMARK 465 LEU Q 193 REMARK 465 VAL Q 194 REMARK 465 PRO Q 195 REMARK 465 ARG Q 196 REMARK 465 GLY Q 197 REMARK 465 SER Q 198 REMARK 465 HIS Q 199 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LEU A 179 O REMARK 470 ARG B 272 CG CD NE CZ NH1 NH2 REMARK 470 ARG Q 272 CG CD NE CZ NH1 NH2 REMARK 470 LYS Q 274 CG CD CE NZ REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 ARG B 272 CB REMARK 480 TYR P 21 N CA CB REMARK 480 ARG Q 272 CB REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O ALA Q 234 O VAL Q 268 1.69 REMARK 500 OG1 THR A 157 O ASP Q 266 1.88 REMARK 500 O SER Q 242 O HOH Q 403 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 41 24.24 -73.51 REMARK 500 ASN A 49 55.60 -155.51 REMARK 500 LEU A 97 72.32 -103.09 REMARK 500 ASN A 99 68.28 64.70 REMARK 500 MET A 158 23.70 -143.03 REMARK 500 ILE A 170 134.41 -38.68 REMARK 500 THR B 260 -165.30 -119.75 REMARK 500 ASP B 266 110.69 74.53 REMARK 500 LEU B 278 -70.02 -47.34 REMARK 500 SER P 24 -54.97 -148.16 REMARK 500 LEU P 97 70.78 -102.62 REMARK 500 MET P 158 21.84 -145.13 REMARK 500 ILE P 170 136.67 -39.99 REMARK 500 THR Q 260 -156.44 -120.55 REMARK 500 ASP Q 266 67.72 88.69 REMARK 500 VAL Q 268 -31.29 -147.04 REMARK 500 ASP Q 269 105.84 22.05 REMARK 500 LYS Q 274 -70.01 -61.28 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL P 201 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4RA9 RELATED DB: PDB DBREF 4RA6 A 1 182 UNP Q8TZE8 Q8TZE8_PYRFU 1 182 DBREF 4RA6 B 202 326 UNP Q8TZE8 Q8TZE8_PYRFU 202 326 DBREF 4RA6 P 1 182 UNP Q8TZE8 Q8TZE8_PYRFU 1 182 DBREF 4RA6 Q 202 326 UNP Q8TZE8 Q8TZE8_PYRFU 202 326 SEQADV 4RA6 MET A -21 UNP Q8TZE8 EXPRESSION TAG SEQADV 4RA6 GLY A -20 UNP Q8TZE8 EXPRESSION TAG SEQADV 4RA6 SER A -19 UNP Q8TZE8 EXPRESSION TAG SEQADV 4RA6 SER A -18 UNP Q8TZE8 EXPRESSION TAG SEQADV 4RA6 HIS A -17 UNP Q8TZE8 EXPRESSION TAG SEQADV 4RA6 HIS A -16 UNP Q8TZE8 EXPRESSION TAG SEQADV 4RA6 HIS A -15 UNP Q8TZE8 EXPRESSION TAG SEQADV 4RA6 HIS A -14 UNP Q8TZE8 EXPRESSION TAG SEQADV 4RA6 HIS A -13 UNP Q8TZE8 EXPRESSION TAG SEQADV 4RA6 HIS A -12 UNP Q8TZE8 EXPRESSION TAG SEQADV 4RA6 SER A -11 UNP Q8TZE8 EXPRESSION TAG SEQADV 4RA6 SER A -10 UNP Q8TZE8 EXPRESSION TAG SEQADV 4RA6 GLY A -9 UNP Q8TZE8 EXPRESSION TAG SEQADV 4RA6 LEU A -8 UNP Q8TZE8 EXPRESSION TAG SEQADV 4RA6 VAL A -7 UNP Q8TZE8 EXPRESSION TAG SEQADV 4RA6 PRO A -6 UNP Q8TZE8 EXPRESSION TAG SEQADV 4RA6 ARG A -5 UNP Q8TZE8 EXPRESSION TAG SEQADV 4RA6 GLY A -4 UNP Q8TZE8 EXPRESSION TAG SEQADV 4RA6 SER A -3 UNP Q8TZE8 EXPRESSION TAG SEQADV 4RA6 HIS A -2 UNP Q8TZE8 EXPRESSION TAG SEQADV 4RA6 MET A -1 UNP Q8TZE8 EXPRESSION TAG SEQADV 4RA6 ALA A 0 UNP Q8TZE8 EXPRESSION TAG SEQADV 4RA6 MET B 180 UNP Q8TZE8 EXPRESSION TAG SEQADV 4RA6 GLY B 181 UNP Q8TZE8 EXPRESSION TAG SEQADV 4RA6 SER B 182 UNP Q8TZE8 EXPRESSION TAG SEQADV 4RA6 SER B 183 UNP Q8TZE8 EXPRESSION TAG SEQADV 4RA6 HIS B 184 UNP Q8TZE8 EXPRESSION TAG SEQADV 4RA6 HIS B 185 UNP Q8TZE8 EXPRESSION TAG SEQADV 4RA6 HIS B 186 UNP Q8TZE8 EXPRESSION TAG SEQADV 4RA6 HIS B 187 UNP Q8TZE8 EXPRESSION TAG SEQADV 4RA6 HIS B 188 UNP Q8TZE8 EXPRESSION TAG SEQADV 4RA6 HIS B 189 UNP Q8TZE8 EXPRESSION TAG SEQADV 4RA6 SER B 190 UNP Q8TZE8 EXPRESSION TAG SEQADV 4RA6 SER B 191 UNP Q8TZE8 EXPRESSION TAG SEQADV 4RA6 GLY B 192 UNP Q8TZE8 EXPRESSION TAG SEQADV 4RA6 LEU B 193 UNP Q8TZE8 EXPRESSION TAG SEQADV 4RA6 VAL B 194 UNP Q8TZE8 EXPRESSION TAG SEQADV 4RA6 PRO B 195 UNP Q8TZE8 EXPRESSION TAG SEQADV 4RA6 ARG B 196 UNP Q8TZE8 EXPRESSION TAG SEQADV 4RA6 GLY B 197 UNP Q8TZE8 EXPRESSION TAG SEQADV 4RA6 SER B 198 UNP Q8TZE8 EXPRESSION TAG SEQADV 4RA6 HIS B 199 UNP Q8TZE8 EXPRESSION TAG SEQADV 4RA6 MET B 200 UNP Q8TZE8 EXPRESSION TAG SEQADV 4RA6 ALA B 201 UNP Q8TZE8 EXPRESSION TAG SEQADV 4RA6 MET P -21 UNP Q8TZE8 EXPRESSION TAG SEQADV 4RA6 GLY P -20 UNP Q8TZE8 EXPRESSION TAG SEQADV 4RA6 SER P -19 UNP Q8TZE8 EXPRESSION TAG SEQADV 4RA6 SER P -18 UNP Q8TZE8 EXPRESSION TAG SEQADV 4RA6 HIS P -17 UNP Q8TZE8 EXPRESSION TAG SEQADV 4RA6 HIS P -16 UNP Q8TZE8 EXPRESSION TAG SEQADV 4RA6 HIS P -15 UNP Q8TZE8 EXPRESSION TAG SEQADV 4RA6 HIS P -14 UNP Q8TZE8 EXPRESSION TAG SEQADV 4RA6 HIS P -13 UNP Q8TZE8 EXPRESSION TAG SEQADV 4RA6 HIS P -12 UNP Q8TZE8 EXPRESSION TAG SEQADV 4RA6 SER P -11 UNP Q8TZE8 EXPRESSION TAG SEQADV 4RA6 SER P -10 UNP Q8TZE8 EXPRESSION TAG SEQADV 4RA6 GLY P -9 UNP Q8TZE8 EXPRESSION TAG SEQADV 4RA6 LEU P -8 UNP Q8TZE8 EXPRESSION TAG SEQADV 4RA6 VAL P -7 UNP Q8TZE8 EXPRESSION TAG SEQADV 4RA6 PRO P -6 UNP Q8TZE8 EXPRESSION TAG SEQADV 4RA6 ARG P -5 UNP Q8TZE8 EXPRESSION TAG SEQADV 4RA6 GLY P -4 UNP Q8TZE8 EXPRESSION TAG SEQADV 4RA6 SER P -3 UNP Q8TZE8 EXPRESSION TAG SEQADV 4RA6 HIS P -2 UNP Q8TZE8 EXPRESSION TAG SEQADV 4RA6 MET P -1 UNP Q8TZE8 EXPRESSION TAG SEQADV 4RA6 ALA P 0 UNP Q8TZE8 EXPRESSION TAG SEQADV 4RA6 MET Q 180 UNP Q8TZE8 EXPRESSION TAG SEQADV 4RA6 GLY Q 181 UNP Q8TZE8 EXPRESSION TAG SEQADV 4RA6 SER Q 182 UNP Q8TZE8 EXPRESSION TAG SEQADV 4RA6 SER Q 183 UNP Q8TZE8 EXPRESSION TAG SEQADV 4RA6 HIS Q 184 UNP Q8TZE8 EXPRESSION TAG SEQADV 4RA6 HIS Q 185 UNP Q8TZE8 EXPRESSION TAG SEQADV 4RA6 HIS Q 186 UNP Q8TZE8 EXPRESSION TAG SEQADV 4RA6 HIS Q 187 UNP Q8TZE8 EXPRESSION TAG SEQADV 4RA6 HIS Q 188 UNP Q8TZE8 EXPRESSION TAG SEQADV 4RA6 HIS Q 189 UNP Q8TZE8 EXPRESSION TAG SEQADV 4RA6 SER Q 190 UNP Q8TZE8 EXPRESSION TAG SEQADV 4RA6 SER Q 191 UNP Q8TZE8 EXPRESSION TAG SEQADV 4RA6 GLY Q 192 UNP Q8TZE8 EXPRESSION TAG SEQADV 4RA6 LEU Q 193 UNP Q8TZE8 EXPRESSION TAG SEQADV 4RA6 VAL Q 194 UNP Q8TZE8 EXPRESSION TAG SEQADV 4RA6 PRO Q 195 UNP Q8TZE8 EXPRESSION TAG SEQADV 4RA6 ARG Q 196 UNP Q8TZE8 EXPRESSION TAG SEQADV 4RA6 GLY Q 197 UNP Q8TZE8 EXPRESSION TAG SEQADV 4RA6 SER Q 198 UNP Q8TZE8 EXPRESSION TAG SEQADV 4RA6 HIS Q 199 UNP Q8TZE8 EXPRESSION TAG SEQADV 4RA6 MET Q 200 UNP Q8TZE8 EXPRESSION TAG SEQADV 4RA6 ALA Q 201 UNP Q8TZE8 EXPRESSION TAG SEQRES 1 A 204 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 204 LEU VAL PRO ARG GLY SER HIS MET ALA MET LYS ILE LEU SEQRES 3 A 204 LEU ILE GLY MET GLY GLY THR ILE ALA SER VAL LYS GLY SEQRES 4 A 204 GLU ASN GLY TYR GLU ALA SER LEU SER VAL LYS GLU VAL SEQRES 5 A 204 LEU ASP ILE ALA GLY ILE LYS ASP CYS GLU ASP CYS ASP SEQRES 6 A 204 PHE LEU ASP LEU LYS ASN VAL ASP SER THR LEU ILE GLN SEQRES 7 A 204 PRO GLU ASP TRP VAL ASP LEU ALA GLU THR LEU TYR LYS SEQRES 8 A 204 ASN VAL LYS LYS TYR ASP GLY ILE ILE VAL THR HIS GLY SEQRES 9 A 204 THR ASP THR LEU ALA TYR THR SER SER MET ILE SER PHE SEQRES 10 A 204 MET LEU ARG ASN PRO PRO ILE PRO ILE VAL PHE THR GLY SEQRES 11 A 204 SER MET ILE PRO ALA THR GLU GLU ASN SER ASP ALA PRO SEQRES 12 A 204 LEU ASN LEU GLN THR ALA ILE LYS PHE ALA THR SER GLY SEQRES 13 A 204 ILE ARG GLY VAL TYR VAL ALA PHE ASN GLY LYS VAL MET SEQRES 14 A 204 LEU GLY VAL ARG THR SER LYS VAL ARG THR MET SER ARG SEQRES 15 A 204 ASP ALA PHE GLU SER ILE ASN TYR PRO ILE ILE ALA GLU SEQRES 16 A 204 LEU ARG GLY GLU ASP LEU VAL VAL ASN SEQRES 1 B 147 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 B 147 LEU VAL PRO ARG GLY SER HIS MET ALA VAL LEU VAL ILE SEQRES 3 B 147 LYS LEU ILE PRO GLY LEU SER GLY ASP ILE PHE ARG ALA SEQRES 4 B 147 ALA VAL GLU LEU GLY TYR ARG GLY ILE VAL ILE GLU GLY SEQRES 5 B 147 TYR GLY ALA GLY GLY ILE PRO TYR ARG GLY SER ASP LEU SEQRES 6 B 147 LEU GLN THR ILE GLU GLU LEU SER LYS GLU ILE PRO ILE SEQRES 7 B 147 VAL MET THR THR GLN ALA MET TYR ASP GLY VAL ASP LEU SEQRES 8 B 147 THR ARG TYR LYS VAL GLY ARG LEU ALA LEU ARG ALA GLY SEQRES 9 B 147 VAL ILE PRO ALA GLY ASP MET THR LYS GLU ALA THR VAL SEQRES 10 B 147 THR LYS LEU MET TRP ILE LEU GLY HIS THR ASN ASN VAL SEQRES 11 B 147 GLU GLU ILE LYS VAL LEU MET ARG LYS ASN LEU VAL GLY SEQRES 12 B 147 GLU LEU ARG ASP SEQRES 1 P 204 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 P 204 LEU VAL PRO ARG GLY SER HIS MET ALA MET LYS ILE LEU SEQRES 3 P 204 LEU ILE GLY MET GLY GLY THR ILE ALA SER VAL LYS GLY SEQRES 4 P 204 GLU ASN GLY TYR GLU ALA SER LEU SER VAL LYS GLU VAL SEQRES 5 P 204 LEU ASP ILE ALA GLY ILE LYS ASP CYS GLU ASP CYS ASP SEQRES 6 P 204 PHE LEU ASP LEU LYS ASN VAL ASP SER THR LEU ILE GLN SEQRES 7 P 204 PRO GLU ASP TRP VAL ASP LEU ALA GLU THR LEU TYR LYS SEQRES 8 P 204 ASN VAL LYS LYS TYR ASP GLY ILE ILE VAL THR HIS GLY SEQRES 9 P 204 THR ASP THR LEU ALA TYR THR SER SER MET ILE SER PHE SEQRES 10 P 204 MET LEU ARG ASN PRO PRO ILE PRO ILE VAL PHE THR GLY SEQRES 11 P 204 SER MET ILE PRO ALA THR GLU GLU ASN SER ASP ALA PRO SEQRES 12 P 204 LEU ASN LEU GLN THR ALA ILE LYS PHE ALA THR SER GLY SEQRES 13 P 204 ILE ARG GLY VAL TYR VAL ALA PHE ASN GLY LYS VAL MET SEQRES 14 P 204 LEU GLY VAL ARG THR SER LYS VAL ARG THR MET SER ARG SEQRES 15 P 204 ASP ALA PHE GLU SER ILE ASN TYR PRO ILE ILE ALA GLU SEQRES 16 P 204 LEU ARG GLY GLU ASP LEU VAL VAL ASN SEQRES 1 Q 147 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 Q 147 LEU VAL PRO ARG GLY SER HIS MET ALA VAL LEU VAL ILE SEQRES 3 Q 147 LYS LEU ILE PRO GLY LEU SER GLY ASP ILE PHE ARG ALA SEQRES 4 Q 147 ALA VAL GLU LEU GLY TYR ARG GLY ILE VAL ILE GLU GLY SEQRES 5 Q 147 TYR GLY ALA GLY GLY ILE PRO TYR ARG GLY SER ASP LEU SEQRES 6 Q 147 LEU GLN THR ILE GLU GLU LEU SER LYS GLU ILE PRO ILE SEQRES 7 Q 147 VAL MET THR THR GLN ALA MET TYR ASP GLY VAL ASP LEU SEQRES 8 Q 147 THR ARG TYR LYS VAL GLY ARG LEU ALA LEU ARG ALA GLY SEQRES 9 Q 147 VAL ILE PRO ALA GLY ASP MET THR LYS GLU ALA THR VAL SEQRES 10 Q 147 THR LYS LEU MET TRP ILE LEU GLY HIS THR ASN ASN VAL SEQRES 11 Q 147 GLU GLU ILE LYS VAL LEU MET ARG LYS ASN LEU VAL GLY SEQRES 12 Q 147 GLU LEU ARG ASP HET GOL A 201 6 HET GOL B 401 6 HET GOL P 201 6 HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 5 GOL 3(C3 H8 O3) FORMUL 8 HOH *60(H2 O) HELIX 1 1 GLY A 10 SER A 14 5 5 HELIX 2 2 SER A 26 GLY A 35 1 10 HELIX 3 3 ASP A 51 ILE A 55 5 5 HELIX 4 4 GLN A 56 LYS A 69 1 14 HELIX 5 5 THR A 85 LEU A 97 1 13 HELIX 6 6 ASP A 119 THR A 132 1 14 HELIX 7 7 GLY B 213 GLU B 221 1 9 HELIX 8 8 ASP B 243 SER B 252 1 10 HELIX 9 9 GLY B 276 ALA B 282 1 7 HELIX 10 10 THR B 291 GLY B 304 1 14 HELIX 11 11 ASN B 308 LYS B 318 1 11 HELIX 12 12 THR P 11 SER P 14 5 4 HELIX 13 13 SER P 26 GLY P 35 1 10 HELIX 14 14 ASP P 51 ILE P 55 5 5 HELIX 15 15 GLN P 56 LYS P 69 1 14 HELIX 16 16 GLY P 82 ASP P 84 5 3 HELIX 17 17 THR P 85 LEU P 97 1 13 HELIX 18 18 ASP P 119 THR P 132 1 14 HELIX 19 19 GLY Q 213 GLU Q 221 1 9 HELIX 20 20 ASP Q 243 SER Q 252 1 10 HELIX 21 21 TYR Q 273 ALA Q 282 1 10 HELIX 22 22 THR Q 291 GLY Q 304 1 14 HELIX 23 23 ASN Q 308 ARG Q 317 1 10 SHEET 1 A 7 CYS A 42 ASP A 46 0 SHEET 2 A 7 ILE A 3 GLY A 7 1 N LEU A 5 O LEU A 45 SHEET 3 A 7 GLY A 76 THR A 80 1 O ILE A 78 N ILE A 6 SHEET 4 A 7 PRO A 103 THR A 107 1 O VAL A 105 N ILE A 77 SHEET 5 A 7 GLY A 137 PHE A 142 1 O ALA A 141 N PHE A 106 SHEET 6 A 7 LYS A 145 LEU A 148 -1 O MET A 147 N VAL A 140 SHEET 7 A 7 ALA A 172 GLU A 173 -1 O ALA A 172 N VAL A 146 SHEET 1 B 2 THR A 152 LYS A 154 0 SHEET 2 B 2 PHE A 163 SER A 165 -1 O GLU A 164 N SER A 153 SHEET 1 C 4 VAL B 202 LYS B 206 0 SHEET 2 C 4 GLY B 226 GLY B 231 1 O VAL B 228 N LEU B 203 SHEET 3 C 4 ILE B 257 THR B 261 1 O VAL B 258 N ILE B 227 SHEET 4 C 4 VAL B 284 PRO B 286 1 O ILE B 285 N ILE B 257 SHEET 1 D 8 CYS P 42 VAL P 50 0 SHEET 2 D 8 ILE P 3 GLY P 9 1 N MET P 8 O VAL P 50 SHEET 3 D 8 GLY P 76 THR P 80 1 O ILE P 78 N ILE P 6 SHEET 4 D 8 PRO P 103 THR P 107 1 O VAL P 105 N ILE P 77 SHEET 5 D 8 GLY P 137 PHE P 142 1 O TYR P 139 N PHE P 106 SHEET 6 D 8 LYS P 145 LEU P 148 -1 O MET P 147 N VAL P 140 SHEET 7 D 8 ALA P 172 ARG P 175 -1 O ALA P 172 N VAL P 146 SHEET 8 D 8 ASP P 178 VAL P 181 -1 O VAL P 180 N GLU P 173 SHEET 1 E 2 THR P 152 LYS P 154 0 SHEET 2 E 2 PHE P 163 SER P 165 -1 O GLU P 164 N SER P 153 SHEET 1 F 4 VAL Q 202 LYS Q 206 0 SHEET 2 F 4 GLY Q 226 GLY Q 231 1 O VAL Q 228 N ILE Q 205 SHEET 3 F 4 ILE Q 257 THR Q 261 1 O VAL Q 258 N ILE Q 229 SHEET 4 F 4 ILE Q 285 PRO Q 286 1 O ILE Q 285 N MET Q 259 SSBOND 1 CYS A 39 CYS A 42 1555 1555 2.03 SSBOND 2 CYS P 39 CYS P 42 1555 1555 2.03 SITE 1 AC1 2 SER A 26 GLU A 29 SITE 1 AC2 4 ASP A 32 LYS A 37 GLU B 221 GLU B 254 SITE 1 AC3 3 LYS P 28 GLU P 29 ASP P 32 CRYST1 61.427 61.427 155.934 90.00 90.00 90.00 P 41 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016279 0.000000 0.000000 0.00000 SCALE2 0.000000 0.016279 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006413 0.00000