HEADER RNA BINDING PROTEIN/RNA 16-SEP-14 4RCM TITLE CRYSTAL STRUCTURE OF THE PHO92 YTH DOMAIN IN COMPLEX WITH M6A COMPND MOL_ID: 1; COMPND 2 MOLECULE: METHYLATED RNA-BINDING PROTEIN 1; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: UNP RESIDUES 141-306; COMPND 5 SYNONYM: PHOSPHATE METABOLISM PROTEIN 92, YTH DOMAIN-CONTAINING COMPND 6 PROTEIN PHO92; COMPND 7 ENGINEERED: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: RNA (5'-R(*UP*G)-D(*(6MZ)P*CP*U)-3'); COMPND 10 CHAIN: D, E; COMPND 11 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE S288C; SOURCE 3 ORGANISM_COMMON: BAKER'S YEAST; SOURCE 4 ORGANISM_TAXID: 559292; SOURCE 5 STRAIN: ATCC 204508 / S288C; SOURCE 6 GENE: PHO92, MRB1, YDR374C; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: BL21-V2R-PRARE2; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET28-MHL; SOURCE 11 MOL_ID: 2; SOURCE 12 SYNTHETIC: YES; SOURCE 13 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 14 ORGANISM_TAXID: 32630 KEYWDS STRUCTURAL GENOMICS, STRUCTURAL GENOMICS CONSORTIUM, SGC, RNA BINDING KEYWDS 2 PROTEIN-RNA COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR W.TEMPEL,C.XU,C.BOUNTRA,C.H.ARROWSMITH,A.M.EDWARDS,J.MIN,STRUCTURAL AUTHOR 2 GENOMICS CONSORTIUM (SGC) REVDAT 4 20-SEP-23 4RCM 1 SEQADV SEQRES REVDAT 3 21-OCT-15 4RCM 1 JRNL REVDAT 2 09-SEP-15 4RCM 1 JRNL REVDAT 1 19-NOV-14 4RCM 0 JRNL AUTH C.XU,K.LIU,H.AHMED,P.LOPPNAU,M.SCHAPIRA,J.MIN JRNL TITL STRUCTURAL BASIS FOR THE DISCRIMINATIVE RECOGNITION OF JRNL TITL 2 N6-METHYLADENOSINE RNA BY THE HUMAN YT521-B HOMOLOGY DOMAIN JRNL TITL 3 FAMILY OF PROTEINS. JRNL REF J.BIOL.CHEM. V. 290 24902 2015 JRNL REFN ISSN 0021-9258 JRNL PMID 26318451 JRNL DOI 10.1074/JBC.M115.680389 REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 32.97 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 3 NUMBER OF REFLECTIONS : 27964 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : THIN SHELLS (SFTOOLS) REMARK 3 R VALUE (WORKING + TEST SET) : 0.220 REMARK 3 R VALUE (WORKING SET) : 0.218 REMARK 3 FREE R VALUE : 0.268 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1149 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.80 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.85 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1921 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 94.17 REMARK 3 BIN R VALUE (WORKING SET) : 0.4230 REMARK 3 BIN FREE R VALUE SET COUNT : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2544 REMARK 3 NUCLEIC ACID ATOMS : 40 REMARK 3 HETEROGEN ATOMS : 19 REMARK 3 SOLVENT ATOMS : 98 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 19.21 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.94000 REMARK 3 B22 (A**2) : -1.59000 REMARK 3 B33 (A**2) : -0.38000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.13000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.167 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.158 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.143 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.912 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.937 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.895 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2732 ; 0.016 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 2534 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3723 ; 1.595 ; 1.949 REMARK 3 BOND ANGLES OTHERS (DEGREES): 5828 ; 0.838 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 345 ; 6.505 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 118 ;35.560 ;23.305 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 453 ;14.296 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 15 ;14.850 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 413 ; 0.101 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3081 ; 0.007 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 676 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1314 ; 2.136 ; 1.842 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1313 ; 2.135 ; 1.840 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1645 ; 3.230 ; 2.743 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: AN ENSEMBLE OF CRYSTALLOGRAPHIC MODELS REMARK 3 OF HUMAN YTHDC1 AND YTHDF1 WAS USED AS SEARCH MODEL FOR REMARK 3 MOLECULAR REPLACEMENT. PARROT WAS USED FOR DENSITY MODIFICATION. REMARK 3 ARP/WARP WAS USED FOR PHASE IMPROVEMENT AND AUTOMATED MODEL REMARK 3 BUILDING. COOT WAS USED FOR INTERACTIVE MODEL BUILDING. MODEL REMARK 3 GEOMETRY WAS EVALUATED WITH MOLPROBITY. REMARK 4 REMARK 4 4RCM COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 18-SEP-14. REMARK 100 THE DEPOSITION ID IS D_1000087179. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-APR-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU FR-E DW REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.2.17 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 27985 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 38.400 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 200 DATA REDUNDANCY : 3.600 REMARK 200 R MERGE (I) : 0.09000 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 10.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.84 REMARK 200 COMPLETENESS FOR SHELL (%) : 92.9 REMARK 200 DATA REDUNDANCY IN SHELL : 3.30 REMARK 200 R MERGE FOR SHELL (I) : 0.39100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 4.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRIES 4R3H AND 4RCI REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 33.29 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.84 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20% PEG-3350, 0.2 M POTASSIUM REMARK 280 ISOCYANATE, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 28.58550 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: AS PER THE AUTHORS THE BIOLOGICAL ASSEMBLY IS UNKNOWN REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, E REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 THR A 304 REMARK 465 TYR A 305 REMARK 465 GLU A 306 REMARK 465 GLY B 140 REMARK 465 SER B 141 REMARK 465 ASP B 296 REMARK 465 GLU B 303 REMARK 465 THR B 304 REMARK 465 TYR B 305 REMARK 465 GLU B 306 REMARK 465 U D 1 REMARK 465 G D 2 REMARK 465 C D 4 REMARK 465 U D 5 REMARK 465 U E 1 REMARK 465 G E 2 REMARK 465 C E 4 REMARK 465 U E 5 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 166 CG CD CE NZ REMARK 470 LYS A 185 CG CD CE NZ REMARK 470 GLU A 189 CD OE1 OE2 REMARK 470 LYS A 192 CE NZ REMARK 470 LYS A 193 CE NZ REMARK 470 MET A 224 CG SD CE REMARK 470 ASP A 233 CG OD1 OD2 REMARK 470 GLN A 235 CG CD OE1 NE2 REMARK 470 LYS A 236 CE NZ REMARK 470 LYS A 239 CE NZ REMARK 470 ARG A 254 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 258 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 265 CG CD OE1 OE2 REMARK 470 GLN A 293 CD OE1 NE2 REMARK 470 GLU A 303 C O CB CG CD OE1 OE2 REMARK 470 LYS B 166 CG CD CE NZ REMARK 470 LYS B 185 CE NZ REMARK 470 LYS B 193 CD CE NZ REMARK 470 LYS B 223 CE NZ REMARK 470 MET B 224 CG SD CE REMARK 470 GLN B 235 CG CD OE1 NE2 REMARK 470 LYS B 236 CE NZ REMARK 470 ARG B 254 CD NE CZ NH1 NH2 REMARK 470 LYS B 257 NZ REMARK 470 ARG B 273 CG CD NE CZ NH1 NH2 REMARK 470 GLN B 293 CG CD OE1 NE2 REMARK 470 SER B 295 CA C O CB OG REMARK 470 ILE B 297 CG1 CG2 CD1 REMARK 470 6MZ D 3 O1P O2P P REMARK 470 6MZ E 3 O1P O2P P REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 196 -125.72 65.79 REMARK 500 THR A 208 -53.16 71.49 REMARK 500 ASN A 264 66.37 -118.60 REMARK 500 GLU A 265 41.26 37.78 REMARK 500 ASP A 302 35.46 -86.27 REMARK 500 SER B 179 -168.58 -104.65 REMARK 500 SER B 196 -133.11 53.89 REMARK 500 THR B 208 -48.18 72.36 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4RCI RELATED DB: PDB REMARK 900 RELATED ID: 4RCJ RELATED DB: PDB DBREF 4RCM A 141 306 UNP Q06390 MRB1_YEAST 141 306 DBREF 4RCM B 141 306 UNP Q06390 MRB1_YEAST 141 306 DBREF 4RCM D 1 5 PDB 4RCM 4RCM 1 5 DBREF 4RCM E 1 5 PDB 4RCM 4RCM 1 5 SEQADV 4RCM GLY A 140 UNP Q06390 EXPRESSION TAG SEQADV 4RCM GLY B 140 UNP Q06390 EXPRESSION TAG SEQRES 1 A 167 GLY SER ALA ALA ILE ILE PRO PRO TRP LEU ASN ILE PRO SEQRES 2 A 167 GLU ASN SER ARG PHE PHE VAL ILE LYS SER SER SER LEU SEQRES 3 A 167 LYS HIS VAL LYS ARG SER PHE TYR ASN GLY ILE TRP SER SEQRES 4 A 167 SER THR HIS PHE GLY ASN LYS ARG LEU SER GLU ALA TYR SEQRES 5 A 167 LYS LYS LEU ASN SER GLY ALA LYS VAL PHE LEU PHE PHE SEQRES 6 A 167 SER ILE ASN THR SER GLY ARG PHE CYS GLY VAL ALA GLU SEQRES 7 A 167 MET VAL SER ASP LEU LYS MET ASP LEU ASP THR SER ILE SEQRES 8 A 167 TRP GLU ASP GLU GLN LYS TYR GLY LYS ALA PHE LYS VAL SEQRES 9 A 167 ARG TRP VAL ILE VAL ARG ASP ILE ASN ASN ARG SER LEU SEQRES 10 A 167 LYS ARG PHE LEU ILE PRO SER ASN GLU MET LYS PRO ILE SEQRES 11 A 167 THR HIS SER ARG ASP THR GLN GLU ILE PRO TYR SER ILE SEQRES 12 A 167 GLY ILE SER ILE ILE ASN LEU PHE LYS THR GLN ASP SER SEQRES 13 A 167 ASP ILE PHE SER PHE LEU ASP GLU THR TYR GLU SEQRES 1 B 167 GLY SER ALA ALA ILE ILE PRO PRO TRP LEU ASN ILE PRO SEQRES 2 B 167 GLU ASN SER ARG PHE PHE VAL ILE LYS SER SER SER LEU SEQRES 3 B 167 LYS HIS VAL LYS ARG SER PHE TYR ASN GLY ILE TRP SER SEQRES 4 B 167 SER THR HIS PHE GLY ASN LYS ARG LEU SER GLU ALA TYR SEQRES 5 B 167 LYS LYS LEU ASN SER GLY ALA LYS VAL PHE LEU PHE PHE SEQRES 6 B 167 SER ILE ASN THR SER GLY ARG PHE CYS GLY VAL ALA GLU SEQRES 7 B 167 MET VAL SER ASP LEU LYS MET ASP LEU ASP THR SER ILE SEQRES 8 B 167 TRP GLU ASP GLU GLN LYS TYR GLY LYS ALA PHE LYS VAL SEQRES 9 B 167 ARG TRP VAL ILE VAL ARG ASP ILE ASN ASN ARG SER LEU SEQRES 10 B 167 LYS ARG PHE LEU ILE PRO SER ASN GLU MET LYS PRO ILE SEQRES 11 B 167 THR HIS SER ARG ASP THR GLN GLU ILE PRO TYR SER ILE SEQRES 12 B 167 GLY ILE SER ILE ILE ASN LEU PHE LYS THR GLN ASP SER SEQRES 13 B 167 ASP ILE PHE SER PHE LEU ASP GLU THR TYR GLU SEQRES 1 D 5 U G 6MZ C U SEQRES 1 E 5 U G 6MZ C U MODRES 4RCM 6MZ D 3 A N6-METHYLADENOSINE-5'-MONOPHOSPHATE MODRES 4RCM 6MZ E 3 A N6-METHYLADENOSINE-5'-MONOPHOSPHATE HET 6MZ D 3 20 HET 6MZ E 3 20 HET UNX A 401 1 HET UNX A 402 1 HET UNX A 403 1 HET UNX A 404 1 HET UNX A 405 1 HET UNX A 406 1 HET UNX A 407 1 HET UNX A 408 1 HET UNX A 409 1 HET UNX B 401 1 HET UNX B 402 1 HET UNX B 403 1 HET UNX B 404 1 HET UNX B 405 1 HET UNX B 406 1 HET UNX B 407 1 HET UNX B 408 1 HET UNX B 409 1 HET UNX B 410 1 HETNAM 6MZ N6-METHYLADENOSINE-5'-MONOPHOSPHATE HETNAM UNX UNKNOWN ATOM OR ION FORMUL 3 6MZ 2(C11 H16 N5 O7 P) FORMUL 5 UNX 19(X) FORMUL 24 HOH *98(H2 O) HELIX 1 1 SER A 164 GLY A 175 1 12 HELIX 2 2 THR A 180 LYS A 193 1 14 HELIX 3 3 ASP A 227 TRP A 231 5 5 HELIX 4 4 ASP A 233 TYR A 237 5 5 HELIX 5 5 ASN A 252 LYS A 257 1 6 HELIX 6 6 PRO A 268 SER A 272 5 5 HELIX 7 7 PRO A 279 LYS A 291 1 13 HELIX 8 8 SER B 164 GLY B 175 1 12 HELIX 9 9 THR B 180 LYS B 193 1 14 HELIX 10 10 ASP B 227 TRP B 231 5 5 HELIX 11 11 ASP B 233 TYR B 237 5 5 HELIX 12 12 ASN B 252 LYS B 257 1 6 HELIX 13 13 ILE B 261 GLU B 265 5 5 HELIX 14 14 PRO B 268 SER B 272 5 5 HELIX 15 15 PRO B 279 LYS B 291 1 13 SHEET 1 A 6 ILE A 176 TRP A 177 0 SHEET 2 A 6 PHE A 241 ILE A 251 -1 O PHE A 241 N TRP A 177 SHEET 3 A 6 ARG A 211 MET A 218 -1 N GLU A 217 O ARG A 244 SHEET 4 A 6 VAL A 200 ILE A 206 -1 N LEU A 202 O ALA A 216 SHEET 5 A 6 ARG A 156 SER A 162 1 N ILE A 160 O SER A 205 SHEET 6 A 6 GLU A 277 ILE A 278 -1 O ILE A 278 N PHE A 157 SHEET 1 B 6 ILE B 176 TRP B 177 0 SHEET 2 B 6 PHE B 241 ILE B 251 -1 O PHE B 241 N TRP B 177 SHEET 3 B 6 ARG B 211 MET B 218 -1 N GLU B 217 O ARG B 244 SHEET 4 B 6 VAL B 200 ILE B 206 -1 N VAL B 200 O MET B 218 SHEET 5 B 6 ARG B 156 SER B 162 1 N ILE B 160 O PHE B 203 SHEET 6 B 6 GLU B 277 ILE B 278 -1 O ILE B 278 N PHE B 157 CRYST1 41.430 57.171 66.725 90.00 103.08 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.024137 0.000000 0.005608 0.00000 SCALE2 0.000000 0.017491 0.000000 0.00000 SCALE3 0.000000 0.000000 0.015386 0.00000