HEADER OXIDOREDUCTASE 24-SEP-14 4RF3 TITLE CRYSTAL STRUCTURE OF KETOREDUCTASE FROM LACTOBACILLUS KEFIR, MUTANT TITLE 2 A94F COMPND MOL_ID: 1; COMPND 2 MOLECULE: NADPH DEPENDENT R-SPECIFIC ALCOHOL DEHYDROGENASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: KETOREDUCTASE; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: LACTOBACILLUS KEFIRI; SOURCE 3 ORGANISM_TAXID: 33962; SOURCE 4 GENE: ADHR; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PHIS8 KEYWDS OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR Y.TANG,N.TIBREWAL,D.CASCIO REVDAT 5 20-SEP-23 4RF3 1 REMARK SEQADV LINK REVDAT 4 06-JAN-16 4RF3 1 JRNL REVDAT 3 23-DEC-15 4RF3 1 JRNL REVDAT 2 25-NOV-15 4RF3 1 JRNL REVDAT 1 30-SEP-15 4RF3 0 JRNL AUTH E.L.NOEY,N.TIBREWAL,G.JIMENEZ-OSES,S.OSUNA,J.PARK,C.M.BOND, JRNL AUTH 2 D.CASCIO,J.LIANG,X.ZHANG,G.W.HUISMAN,Y.TANG,K.N.HOUK JRNL TITL ORIGINS OF STEREOSELECTIVITY IN EVOLVED KETOREDUCTASES. JRNL REF PROC.NATL.ACAD.SCI.USA V. 112 E7065 2015 JRNL REFN ISSN 0027-8424 JRNL PMID 26644568 JRNL DOI 10.1073/PNAS.1507910112 REMARK 2 REMARK 2 RESOLUTION. 1.69 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX DEV_1555 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.69 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 56.78 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.330 REMARK 3 COMPLETENESS FOR RANGE (%) : 84.0 REMARK 3 NUMBER OF REFLECTIONS : 46936 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.211 REMARK 3 R VALUE (WORKING SET) : 0.208 REMARK 3 FREE R VALUE : 0.242 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.000 REMARK 3 FREE R VALUE TEST SET COUNT : 4693 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 56.8120 - 5.2624 0.75 1383 154 0.1861 0.2007 REMARK 3 2 5.2624 - 4.1773 0.80 1398 155 0.1520 0.1749 REMARK 3 3 4.1773 - 3.6494 0.76 1305 145 0.1600 0.1793 REMARK 3 4 3.6494 - 3.3157 0.82 1407 157 0.1774 0.1893 REMARK 3 5 3.3157 - 3.0781 0.84 1405 156 0.1912 0.2192 REMARK 3 6 3.0781 - 2.8966 0.84 1440 160 0.2074 0.2426 REMARK 3 7 2.8966 - 2.7516 0.77 1290 143 0.2370 0.2751 REMARK 3 8 2.7516 - 2.6318 0.80 1348 150 0.2207 0.2168 REMARK 3 9 2.6318 - 2.5305 0.84 1422 158 0.2149 0.2576 REMARK 3 10 2.5305 - 2.4432 0.85 1416 157 0.2332 0.2411 REMARK 3 11 2.4432 - 2.3668 0.85 1431 158 0.2277 0.3124 REMARK 3 12 2.3668 - 2.2991 0.85 1425 159 0.2185 0.2485 REMARK 3 13 2.2991 - 2.2386 0.87 1439 160 0.2112 0.2433 REMARK 3 14 2.2386 - 2.1840 0.86 1432 159 0.2213 0.2634 REMARK 3 15 2.1840 - 2.1343 0.76 1287 143 0.2219 0.2663 REMARK 3 16 2.1343 - 2.0889 0.84 1390 154 0.2216 0.2803 REMARK 3 17 2.0889 - 2.0471 0.86 1424 159 0.2229 0.2482 REMARK 3 18 2.0471 - 2.0085 0.87 1433 159 0.2082 0.2803 REMARK 3 19 2.0085 - 1.9726 0.88 1481 165 0.2227 0.2709 REMARK 3 20 1.9726 - 1.9392 0.89 1456 162 0.2250 0.2623 REMARK 3 21 1.9392 - 1.9079 0.88 1479 164 0.2193 0.3011 REMARK 3 22 1.9079 - 1.8785 0.89 1463 162 0.2223 0.2667 REMARK 3 23 1.8785 - 1.8509 0.89 1481 165 0.2320 0.2603 REMARK 3 24 1.8509 - 1.8248 0.90 1498 167 0.2325 0.2943 REMARK 3 25 1.8248 - 1.8002 0.83 1385 153 0.2507 0.2969 REMARK 3 26 1.8002 - 1.7768 0.84 1372 153 0.2479 0.3426 REMARK 3 27 1.7768 - 1.7546 0.87 1429 159 0.2595 0.3161 REMARK 3 28 1.7546 - 1.7334 0.89 1482 164 0.2572 0.3064 REMARK 3 29 1.7334 - 1.7133 0.89 1480 164 0.2599 0.3256 REMARK 3 30 1.7133 - 1.6940 0.71 1162 129 0.3566 0.3568 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.210 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 25.810 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 15.45 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 19.36 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 3766 REMARK 3 ANGLE : 0.985 5099 REMARK 3 CHIRALITY : 0.041 593 REMARK 3 PLANARITY : 0.005 658 REMARK 3 DIHEDRAL : 10.932 1324 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ( CHAIN A AND ( RESID 2:252 OR RESID 301:301 OR REMARK 3 RESID 401:537 OR RESID 302:302 ) ) OR ( CHAIN B AND REMARK 3 ( RESID 3:252 OR RESID 301:303 ) ) REMARK 3 ORIGIN FOR THE GROUP (A): -4.563 14.686 11.213 REMARK 3 T TENSOR REMARK 3 T11: 0.1563 T22: 0.1420 REMARK 3 T33: 0.0873 T12: 0.0044 REMARK 3 T13: -0.0026 T23: -0.0023 REMARK 3 L TENSOR REMARK 3 L11: 0.1626 L22: 0.2360 REMARK 3 L33: 0.4482 L12: -0.0486 REMARK 3 L13: -0.0332 L23: -0.0834 REMARK 3 S TENSOR REMARK 3 S11: -0.0098 S12: -0.0387 S13: 0.0073 REMARK 3 S21: 0.0470 S22: 0.0009 S23: 0.0111 REMARK 3 S31: -0.0471 S32: -0.0159 S33: 0.0061 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : 1 REMARK 3 NCS GROUP : 1 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: CHAIN A REMARK 3 SELECTION : CHAIN B REMARK 3 ATOM PAIRS NUMBER : 2228 REMARK 3 RMSD : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4RF3 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 25-SEP-14. REMARK 100 THE DEPOSITION ID IS D_1000087266. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 09-DEC-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 24-ID-C REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9792 REMARK 200 MONOCHROMATOR : CRYO-COOLED DOUBLE CRYSTAL REMARK 200 SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M-F REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 46947 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.690 REMARK 200 RESOLUTION RANGE LOW (A) : 67.610 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 84.0 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : 0.10100 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 9.5400 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.69 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.74 REMARK 200 COMPLETENESS FOR SHELL (%) : 81.2 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.47100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.270 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.5.5 REMARK 200 STARTING MODEL: PDB ENTRY 1NXQ REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.23 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.13 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.6 M MAGNESIUM CHLORIDE, 0.1 M BIS REMARK 280 -TRIS, PH 5.5, 20% W/V PEG3350, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 33.07500 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 55.33500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 33.07500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 55.33500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 14670 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 30680 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -102.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 HIS A -19 REMARK 465 HIS A -18 REMARK 465 HIS A -17 REMARK 465 HIS A -16 REMARK 465 HIS A -15 REMARK 465 HIS A -14 REMARK 465 HIS A -13 REMARK 465 HIS A -12 REMARK 465 GLY A -11 REMARK 465 GLY A -10 REMARK 465 LEU A -9 REMARK 465 VAL A -8 REMARK 465 PRO A -7 REMARK 465 ARG A -6 REMARK 465 GLY A -5 REMARK 465 SER A -4 REMARK 465 HIS A -3 REMARK 465 GLY A -2 REMARK 465 GLY A -1 REMARK 465 SER A 0 REMARK 465 MET A 1 REMARK 465 HIS B -19 REMARK 465 HIS B -18 REMARK 465 HIS B -17 REMARK 465 HIS B -16 REMARK 465 HIS B -15 REMARK 465 HIS B -14 REMARK 465 HIS B -13 REMARK 465 HIS B -12 REMARK 465 GLY B -11 REMARK 465 GLY B -10 REMARK 465 LEU B -9 REMARK 465 VAL B -8 REMARK 465 PRO B -7 REMARK 465 ARG B -6 REMARK 465 GLY B -5 REMARK 465 SER B -4 REMARK 465 HIS B -3 REMARK 465 GLY B -2 REMARK 465 GLY B -1 REMARK 465 SER B 0 REMARK 465 MET B 1 REMARK 465 THR B 2 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 THR A 2 OG1 CG2 REMARK 470 LYS A 6 CG CD CE NZ REMARK 470 GLU A 45 CG CD OE1 OE2 REMARK 470 LYS A 46 CG CD CE NZ REMARK 470 GLU A 105 CG CD OE1 OE2 REMARK 470 GLU A 200 CG CD OE1 OE2 REMARK 470 MET A 205 CG SD CE REMARK 470 ASP B 3 CG OD1 OD2 REMARK 470 LYS B 6 CG CD CE NZ REMARK 470 GLU B 78 CG CD OE1 OE2 REMARK 470 GLU B 79 CG CD OE1 OE2 REMARK 470 GLU B 105 CG CD OE1 OE2 REMARK 470 ARG B 108 CZ NH1 NH2 REMARK 470 LYS B 192 CG CD CE NZ REMARK 470 GLU B 200 CG CD OE1 OE2 REMARK 470 MET B 205 CG SD CE REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OG SER A 143 OE1 GLU A 145 2.08 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 142 -138.09 -99.20 REMARK 500 LYS A 211 -74.17 -104.81 REMARK 500 ASP A 246 13.79 -141.22 REMARK 500 SER B 142 -137.54 -97.44 REMARK 500 LYS B 211 -74.29 -103.90 REMARK 500 ASP B 246 13.14 -141.52 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 302 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 25 OD1 REMARK 620 2 HOH A 406 O 90.5 REMARK 620 3 HOH A 407 O 175.1 90.4 REMARK 620 4 HOH A 408 O 86.5 176.9 92.5 REMARK 620 5 HOH A 409 O 97.7 83.5 87.1 97.7 REMARK 620 6 HOH A 410 O 94.7 81.6 80.7 97.8 160.7 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 301 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLN A 252 O REMARK 620 2 HOH A 402 O 74.8 REMARK 620 3 HOH A 403 O 92.4 96.7 REMARK 620 4 HOH A 404 O 97.2 89.9 169.5 REMARK 620 5 HOH A 405 O 93.4 167.6 87.8 87.5 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 303 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4RF2 RELATED DB: PDB REMARK 900 RELATED ID: 4RF4 RELATED DB: PDB REMARK 900 RELATED ID: 4RF5 RELATED DB: PDB DBREF 4RF3 A 1 252 UNP Q6WVP7 Q6WVP7_9LACO 1 252 DBREF 4RF3 B 1 252 UNP Q6WVP7 Q6WVP7_9LACO 1 252 SEQADV 4RF3 HIS A -19 UNP Q6WVP7 EXPRESSION TAG SEQADV 4RF3 HIS A -18 UNP Q6WVP7 EXPRESSION TAG SEQADV 4RF3 HIS A -17 UNP Q6WVP7 EXPRESSION TAG SEQADV 4RF3 HIS A -16 UNP Q6WVP7 EXPRESSION TAG SEQADV 4RF3 HIS A -15 UNP Q6WVP7 EXPRESSION TAG SEQADV 4RF3 HIS A -14 UNP Q6WVP7 EXPRESSION TAG SEQADV 4RF3 HIS A -13 UNP Q6WVP7 EXPRESSION TAG SEQADV 4RF3 HIS A -12 UNP Q6WVP7 EXPRESSION TAG SEQADV 4RF3 GLY A -11 UNP Q6WVP7 EXPRESSION TAG SEQADV 4RF3 GLY A -10 UNP Q6WVP7 EXPRESSION TAG SEQADV 4RF3 LEU A -9 UNP Q6WVP7 EXPRESSION TAG SEQADV 4RF3 VAL A -8 UNP Q6WVP7 EXPRESSION TAG SEQADV 4RF3 PRO A -7 UNP Q6WVP7 EXPRESSION TAG SEQADV 4RF3 ARG A -6 UNP Q6WVP7 EXPRESSION TAG SEQADV 4RF3 GLY A -5 UNP Q6WVP7 EXPRESSION TAG SEQADV 4RF3 SER A -4 UNP Q6WVP7 EXPRESSION TAG SEQADV 4RF3 HIS A -3 UNP Q6WVP7 EXPRESSION TAG SEQADV 4RF3 GLY A -2 UNP Q6WVP7 EXPRESSION TAG SEQADV 4RF3 GLY A -1 UNP Q6WVP7 EXPRESSION TAG SEQADV 4RF3 SER A 0 UNP Q6WVP7 EXPRESSION TAG SEQADV 4RF3 PHE A 94 UNP Q6WVP7 ALA 94 ENGINEERED MUTATION SEQADV 4RF3 HIS B -19 UNP Q6WVP7 EXPRESSION TAG SEQADV 4RF3 HIS B -18 UNP Q6WVP7 EXPRESSION TAG SEQADV 4RF3 HIS B -17 UNP Q6WVP7 EXPRESSION TAG SEQADV 4RF3 HIS B -16 UNP Q6WVP7 EXPRESSION TAG SEQADV 4RF3 HIS B -15 UNP Q6WVP7 EXPRESSION TAG SEQADV 4RF3 HIS B -14 UNP Q6WVP7 EXPRESSION TAG SEQADV 4RF3 HIS B -13 UNP Q6WVP7 EXPRESSION TAG SEQADV 4RF3 HIS B -12 UNP Q6WVP7 EXPRESSION TAG SEQADV 4RF3 GLY B -11 UNP Q6WVP7 EXPRESSION TAG SEQADV 4RF3 GLY B -10 UNP Q6WVP7 EXPRESSION TAG SEQADV 4RF3 LEU B -9 UNP Q6WVP7 EXPRESSION TAG SEQADV 4RF3 VAL B -8 UNP Q6WVP7 EXPRESSION TAG SEQADV 4RF3 PRO B -7 UNP Q6WVP7 EXPRESSION TAG SEQADV 4RF3 ARG B -6 UNP Q6WVP7 EXPRESSION TAG SEQADV 4RF3 GLY B -5 UNP Q6WVP7 EXPRESSION TAG SEQADV 4RF3 SER B -4 UNP Q6WVP7 EXPRESSION TAG SEQADV 4RF3 HIS B -3 UNP Q6WVP7 EXPRESSION TAG SEQADV 4RF3 GLY B -2 UNP Q6WVP7 EXPRESSION TAG SEQADV 4RF3 GLY B -1 UNP Q6WVP7 EXPRESSION TAG SEQADV 4RF3 SER B 0 UNP Q6WVP7 EXPRESSION TAG SEQADV 4RF3 PHE B 94 UNP Q6WVP7 ALA 94 ENGINEERED MUTATION SEQRES 1 A 272 HIS HIS HIS HIS HIS HIS HIS HIS GLY GLY LEU VAL PRO SEQRES 2 A 272 ARG GLY SER HIS GLY GLY SER MET THR ASP ARG LEU LYS SEQRES 3 A 272 GLY LYS VAL ALA ILE VAL THR GLY GLY THR LEU GLY ILE SEQRES 4 A 272 GLY LEU ALA ILE ALA ASP LYS PHE VAL GLU GLU GLY ALA SEQRES 5 A 272 LYS VAL VAL ILE THR GLY ARG HIS ALA ASP VAL GLY GLU SEQRES 6 A 272 LYS ALA ALA LYS SER ILE GLY GLY THR ASP VAL ILE ARG SEQRES 7 A 272 PHE VAL GLN HIS ASP ALA SER ASP GLU ALA GLY TRP THR SEQRES 8 A 272 LYS LEU PHE ASP THR THR GLU GLU ALA PHE GLY PRO VAL SEQRES 9 A 272 THR THR VAL VAL ASN ASN ALA GLY ILE PHE VAL SER LYS SEQRES 10 A 272 SER VAL GLU ASP THR THR THR GLU GLU TRP ARG LYS LEU SEQRES 11 A 272 LEU SER VAL ASN LEU ASP GLY VAL PHE PHE GLY THR ARG SEQRES 12 A 272 LEU GLY ILE GLN ARG MET LYS ASN LYS GLY LEU GLY ALA SEQRES 13 A 272 SER ILE ILE ASN MET SER SER ILE GLU GLY PHE VAL GLY SEQRES 14 A 272 ASP PRO THR LEU GLY ALA TYR ASN ALA SER LYS GLY ALA SEQRES 15 A 272 VAL ARG ILE MET SER LYS SER ALA ALA LEU ASP CYS ALA SEQRES 16 A 272 LEU LYS ASP TYR ASP VAL ARG VAL ASN THR VAL HIS PRO SEQRES 17 A 272 GLY TYR ILE LYS THR PRO LEU VAL ASP ASP LEU GLU GLY SEQRES 18 A 272 ALA GLU GLU MET MET SER GLN ARG THR LYS THR PRO MET SEQRES 19 A 272 GLY HIS ILE GLY GLU PRO ASN ASP ILE ALA TRP ILE CYS SEQRES 20 A 272 VAL TYR LEU ALA SER ASP GLU SER LYS PHE ALA THR GLY SEQRES 21 A 272 ALA GLU PHE VAL VAL ASP GLY GLY TYR THR ALA GLN SEQRES 1 B 272 HIS HIS HIS HIS HIS HIS HIS HIS GLY GLY LEU VAL PRO SEQRES 2 B 272 ARG GLY SER HIS GLY GLY SER MET THR ASP ARG LEU LYS SEQRES 3 B 272 GLY LYS VAL ALA ILE VAL THR GLY GLY THR LEU GLY ILE SEQRES 4 B 272 GLY LEU ALA ILE ALA ASP LYS PHE VAL GLU GLU GLY ALA SEQRES 5 B 272 LYS VAL VAL ILE THR GLY ARG HIS ALA ASP VAL GLY GLU SEQRES 6 B 272 LYS ALA ALA LYS SER ILE GLY GLY THR ASP VAL ILE ARG SEQRES 7 B 272 PHE VAL GLN HIS ASP ALA SER ASP GLU ALA GLY TRP THR SEQRES 8 B 272 LYS LEU PHE ASP THR THR GLU GLU ALA PHE GLY PRO VAL SEQRES 9 B 272 THR THR VAL VAL ASN ASN ALA GLY ILE PHE VAL SER LYS SEQRES 10 B 272 SER VAL GLU ASP THR THR THR GLU GLU TRP ARG LYS LEU SEQRES 11 B 272 LEU SER VAL ASN LEU ASP GLY VAL PHE PHE GLY THR ARG SEQRES 12 B 272 LEU GLY ILE GLN ARG MET LYS ASN LYS GLY LEU GLY ALA SEQRES 13 B 272 SER ILE ILE ASN MET SER SER ILE GLU GLY PHE VAL GLY SEQRES 14 B 272 ASP PRO THR LEU GLY ALA TYR ASN ALA SER LYS GLY ALA SEQRES 15 B 272 VAL ARG ILE MET SER LYS SER ALA ALA LEU ASP CYS ALA SEQRES 16 B 272 LEU LYS ASP TYR ASP VAL ARG VAL ASN THR VAL HIS PRO SEQRES 17 B 272 GLY TYR ILE LYS THR PRO LEU VAL ASP ASP LEU GLU GLY SEQRES 18 B 272 ALA GLU GLU MET MET SER GLN ARG THR LYS THR PRO MET SEQRES 19 B 272 GLY HIS ILE GLY GLU PRO ASN ASP ILE ALA TRP ILE CYS SEQRES 20 B 272 VAL TYR LEU ALA SER ASP GLU SER LYS PHE ALA THR GLY SEQRES 21 B 272 ALA GLU PHE VAL VAL ASP GLY GLY TYR THR ALA GLN HET MG A 301 1 HET MG A 302 1 HET GOL B 301 6 HET GOL B 302 6 HET GOL B 303 6 HETNAM MG MAGNESIUM ION HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 MG 2(MG 2+) FORMUL 5 GOL 3(C3 H8 O3) FORMUL 8 HOH *137(H2 O) HELIX 1 1 LEU A 17 GLU A 30 1 14 HELIX 2 2 HIS A 40 GLY A 52 1 13 HELIX 3 3 ASP A 66 GLY A 82 1 17 HELIX 4 4 THR A 103 LEU A 115 1 13 HELIX 5 5 LEU A 115 LYS A 130 1 16 HELIX 6 6 SER A 143 PHE A 147 5 5 HELIX 7 7 LEU A 153 LYS A 177 1 25 HELIX 8 8 THR A 193 LEU A 199 1 7 HELIX 9 9 GLY A 201 SER A 207 1 7 HELIX 10 10 GLU A 219 SER A 232 1 14 HELIX 11 11 ASP A 233 LYS A 236 5 4 HELIX 12 12 LEU B 17 GLU B 30 1 14 HELIX 13 13 HIS B 40 GLY B 52 1 13 HELIX 14 14 ASP B 66 GLY B 82 1 17 HELIX 15 15 THR B 103 LEU B 115 1 13 HELIX 16 16 LEU B 115 LYS B 130 1 16 HELIX 17 17 SER B 143 PHE B 147 5 5 HELIX 18 18 LEU B 153 LYS B 177 1 25 HELIX 19 19 THR B 193 LEU B 199 1 7 HELIX 20 20 GLY B 201 SER B 207 1 7 HELIX 21 21 GLU B 219 SER B 232 1 14 HELIX 22 22 ASP B 233 LYS B 236 5 4 HELIX 23 23 GLY B 248 GLN B 252 5 5 SHEET 1 A 7 ILE A 57 GLN A 61 0 SHEET 2 A 7 LYS A 33 GLY A 38 1 N ILE A 36 O ARG A 58 SHEET 3 A 7 VAL A 9 VAL A 12 1 N ALA A 10 O LYS A 33 SHEET 4 A 7 THR A 86 ASN A 89 1 O VAL A 88 N ILE A 11 SHEET 5 A 7 ALA A 136 MET A 141 1 O ILE A 139 N VAL A 87 SHEET 6 A 7 VAL A 181 PRO A 188 1 O ARG A 182 N ILE A 138 SHEET 7 A 7 GLU A 242 VAL A 245 1 O PHE A 243 N HIS A 187 SHEET 1 B 7 ILE B 57 GLN B 61 0 SHEET 2 B 7 LYS B 33 GLY B 38 1 N ILE B 36 O VAL B 60 SHEET 3 B 7 VAL B 9 VAL B 12 1 N ALA B 10 O LYS B 33 SHEET 4 B 7 THR B 86 ASN B 89 1 O VAL B 88 N ILE B 11 SHEET 5 B 7 ALA B 136 MET B 141 1 O ILE B 139 N VAL B 87 SHEET 6 B 7 VAL B 181 PRO B 188 1 O ARG B 182 N ILE B 138 SHEET 7 B 7 GLU B 242 VAL B 245 1 O PHE B 243 N HIS B 187 LINK OD1 ASP A 25 MG MG A 302 1555 1555 2.07 LINK O GLN A 252 MG MG A 301 1555 1555 2.05 LINK MG MG A 301 O HOH A 402 1555 1555 2.13 LINK MG MG A 301 O HOH A 403 1555 1555 1.91 LINK MG MG A 301 O HOH A 404 1555 1555 2.21 LINK MG MG A 301 O HOH A 405 1555 1555 2.08 LINK MG MG A 302 O HOH A 406 1555 1555 2.16 LINK MG MG A 302 O HOH A 407 1555 1555 2.09 LINK MG MG A 302 O HOH A 408 1555 1555 2.03 LINK MG MG A 302 O HOH A 409 1555 1555 2.09 LINK MG MG A 302 O HOH A 410 1555 1555 2.31 SITE 1 AC1 6 GLN A 252 HOH A 402 HOH A 403 HOH A 404 SITE 2 AC1 6 HOH A 405 GLN B 252 SITE 1 AC2 6 ASP A 25 HOH A 406 HOH A 407 HOH A 408 SITE 2 AC2 6 HOH A 409 HOH A 410 SITE 1 AC3 10 ASP A 66 GLY A 69 LYS A 72 HOH A 453 SITE 2 AC3 10 HOH A 521 GLN B 61 HIS B 62 ASP B 63 SITE 3 AC3 10 ASP B 66 GOL B 302 SITE 1 AC4 10 GLN A 61 HIS A 62 ASP A 63 ASP A 66 SITE 2 AC4 10 HOH A 429 HOH A 526 ASP B 66 GLY B 69 SITE 3 AC4 10 LYS B 72 GOL B 301 SITE 1 AC5 2 LEU B 111 ASP B 116 CRYST1 66.150 110.670 67.610 90.00 90.00 90.00 P 21 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015117 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009036 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014791 0.00000