HEADER MEMBRANE PROTEIN 01-OCT-14 4RHA TITLE STRUCTURE OF THE C-TERMINAL DOMAIN OF OUTER-MEMBRANE PROTEIN OMPA FROM TITLE 2 SALMONELLA ENTERICA SUBSP. ENTERICA SEROVAR TYPHIMURIUM STR. 14028S COMPND MOL_ID: 1; COMPND 2 MOLECULE: OUTER MEMBRANE PROTEIN A; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: OMPA_C DOMAIN (UNP RESIDUES 204-345); COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SALMONELLA ENTERICA SUBSP. ENTERICA SEROVAR SOURCE 3 TYPHIMURIUM STR. 14028S; SOURCE 4 ORGANISM_TAXID: 588858; SOURCE 5 STRAIN: 14028S; SOURCE 6 GENE: OMPA; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: BL21(DE3) MAGIC; SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: P11 KEYWDS STRUCTURAL GENOMICS, PSI-BIOLOGY, MIDWEST CENTER FOR STRUCTURAL KEYWDS 2 GENOMICS, MCSG, OMPA, PUTATIVE PEPTIDOGLYCAN DOMAIN, OUTER MEMBRANE KEYWDS 3 PROTEIN, MEMBRANE PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR M.E.CUFF,T.SKARINA,A.SAVCHENKO,A.EDWARDS,A.JOACHIMIAK,MIDWEST CENTER AUTHOR 2 FOR STRUCTURAL GENOMICS (MCSG) REVDAT 5 04-DEC-19 4RHA 1 JRNL SEQADV LINK REVDAT 4 22-NOV-17 4RHA 1 REMARK REVDAT 3 25-MAR-15 4RHA 1 ATOM DBREF HELIX HET REVDAT 3 2 1 MODRES REMARK SEQADV SHEET REVDAT 3 3 1 SITE REVDAT 2 04-FEB-15 4RHA 1 REMARK SOURCE TITLE DBREF REVDAT 2 2 1 SEQADV REVDAT 1 29-OCT-14 4RHA 0 JRNL AUTH K.TAN,B.L.DEATHERAGE KAISER,R.WU,M.CUFF,Y.FAN,L.BIGELOW, JRNL AUTH 2 R.P.JEDRZEJCZAK,J.N.ADKINS,J.R.CORT,G.BABNIGG,A.JOACHIMIAK JRNL TITL INSIGHTS INTO PG-BINDING, CONFORMATIONAL CHANGE, AND JRNL TITL 2 DIMERIZATION OF THE OMPA C-TERMINAL DOMAINS FROM SALMONELLA JRNL TITL 3 ENTERICA SEROVAR TYPHIMURIUM AND BORRELIA BURGDORFERI. JRNL REF PROTEIN SCI. V. 26 1738 2017 JRNL REFN ESSN 1469-896X JRNL PMID 28580643 JRNL DOI 10.1002/PRO.3209 REMARK 2 REMARK 2 RESOLUTION. 1.75 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0073 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD WITH PHASES REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.75 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.31 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 26698 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.168 REMARK 3 R VALUE (WORKING SET) : 0.167 REMARK 3 FREE R VALUE : 0.198 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1421 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.75 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.80 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1999 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.2150 REMARK 3 BIN FREE R VALUE SET COUNT : 105 REMARK 3 BIN FREE R VALUE : 0.2390 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1944 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 42 REMARK 3 SOLVENT ATOMS : 192 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 30.70 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 37.49 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.03000 REMARK 3 B22 (A**2) : 0.03000 REMARK 3 B33 (A**2) : -0.11000 REMARK 3 B12 (A**2) : 0.02000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.106 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.102 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.067 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.086 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.968 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.957 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2097 ; 0.014 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 1987 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2854 ; 1.540 ; 1.990 REMARK 3 BOND ANGLES OTHERS (DEGREES): 4579 ; 0.821 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 273 ; 5.498 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 93 ;36.116 ;25.484 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 351 ;13.593 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 12 ;13.195 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 329 ; 0.088 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2426 ; 0.007 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 452 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1075 ; 1.900 ; 2.492 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1073 ; 1.886 ; 2.487 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1353 ; 2.806 ; 3.701 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 213 A 345 REMARK 3 ORIGIN FOR THE GROUP (A): 38.3720 20.4628 22.5991 REMARK 3 T TENSOR REMARK 3 T11: 0.0248 T22: 0.0511 REMARK 3 T33: 0.0408 T12: -0.0036 REMARK 3 T13: 0.0205 T23: -0.0289 REMARK 3 L TENSOR REMARK 3 L11: 2.6605 L22: 1.4627 REMARK 3 L33: 1.5901 L12: 0.4398 REMARK 3 L13: 0.7027 L23: 0.2285 REMARK 3 S TENSOR REMARK 3 S11: 0.1481 S12: -0.0453 S13: 0.0505 REMARK 3 S21: 0.0239 S22: 0.0336 S23: -0.0890 REMARK 3 S31: -0.0185 S32: 0.1829 S33: -0.1817 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 214 B 340 REMARK 3 ORIGIN FOR THE GROUP (A): 55.4313 8.9341 21.0383 REMARK 3 T TENSOR REMARK 3 T11: 0.0214 T22: 0.0548 REMARK 3 T33: 0.0068 T12: 0.0213 REMARK 3 T13: -0.0036 T23: -0.0109 REMARK 3 L TENSOR REMARK 3 L11: 2.3814 L22: 1.5500 REMARK 3 L33: 1.3539 L12: 0.0714 REMARK 3 L13: -0.6522 L23: -0.3610 REMARK 3 S TENSOR REMARK 3 S11: 0.0527 S12: -0.1387 S13: 0.1031 REMARK 3 S21: -0.0601 S22: -0.0366 S23: 0.0473 REMARK 3 S31: -0.0764 S32: 0.0189 S33: -0.0160 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 4RHA COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 09-OCT-14. REMARK 100 THE DEPOSITION ID IS D_1000087345. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 11-AUG-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97915, 0.97929 REMARK 200 MONOCHROMATOR : SAGITALLY FOCUSED SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO, HKL-3000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 28244 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.750 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 6.200 REMARK 200 R MERGE (I) : 0.06600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 10.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.75 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.78 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 5.50 REMARK 200 R MERGE FOR SHELL (I) : 0.30300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: MLPHARE, DM 6.1, HKL-3000 SHELXD, SOLVE, RESOLVE, REMARK 200 CCP4 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.59 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.30 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2.5M AMMONIUM SULPHATE, 0.1M HEPES PH REMARK 280 7.5, 1.5% MPD, 20MM MAGNESIUM ACETATE, EVAPORATION, TEMPERATURE REMARK 280 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 48.49733 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 24.24867 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3300 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 13580 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -121.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 2 -0.500000 0.866025 0.000000 58.62700 REMARK 350 BIOMT2 2 -0.866025 -0.500000 0.000000 101.54494 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 24.24867 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 181 REMARK 465 HIS A 182 REMARK 465 VAL A 183 REMARK 465 ALA A 184 REMARK 465 PRO A 185 REMARK 465 ALA A 186 REMARK 465 PRO A 187 REMARK 465 ALA A 188 REMARK 465 PRO A 189 REMARK 465 ALA A 190 REMARK 465 PRO A 191 REMARK 465 LYS A 234 REMARK 465 ASP A 235 REMARK 465 GLY A 325 REMARK 465 SER A 326 REMARK 465 GLY B 181 REMARK 465 HIS B 182 REMARK 465 VAL B 183 REMARK 465 ALA B 184 REMARK 465 PRO B 185 REMARK 465 ALA B 186 REMARK 465 PRO B 187 REMARK 465 ALA B 188 REMARK 465 PRO B 189 REMARK 465 ALA B 190 REMARK 465 PRO B 191 REMARK 465 GLU B 192 REMARK 465 VAL B 320 REMARK 465 LYS B 321 REMARK 465 ASP B 322 REMARK 465 VAL B 323 REMARK 465 VAL B 324 REMARK 465 GLY B 325 REMARK 465 SER B 326 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 192 CG CD OE1 OE2 REMARK 470 LEU A 231 CG CD1 CD2 REMARK 470 ASP A 232 CG OD1 OD2 REMARK 470 LYS A 298 CG CD CE NZ REMARK 470 LYS A 321 CG CD CE NZ REMARK 470 LYS B 196 CG CD CE NZ REMARK 470 LYS B 298 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 SER B 202 CB SER B 202 OG -0.080 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A 299 -167.72 -71.02 REMARK 500 ASN B 209 17.32 58.98 REMARK 500 ASN B 209 17.32 59.78 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MPD A 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACY A 405 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 406 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 402 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4ERH RELATED DB: PDB REMARK 900 SAME PROTEIN, DIFFERENT CRYSTAL FORM REMARK 900 RELATED ID: MCSG-APC101566 RELATED DB: TARGETTRACK DBREF 4RHA A 183 324 UNP D0ZTJ5 D0ZTJ5_SALT1 204 345 DBREF 4RHA B 183 324 UNP D0ZTJ5 D0ZTJ5_SALT1 204 345 SEQADV 4RHA GLY A 181 UNP D0ZTJ5 EXPRESSION TAG SEQADV 4RHA HIS A 182 UNP D0ZTJ5 EXPRESSION TAG SEQADV 4RHA GLY A 325 UNP D0ZTJ5 EXPRESSION TAG SEQADV 4RHA SER A 326 UNP D0ZTJ5 EXPRESSION TAG SEQADV 4RHA GLY B 181 UNP D0ZTJ5 EXPRESSION TAG SEQADV 4RHA HIS B 182 UNP D0ZTJ5 EXPRESSION TAG SEQADV 4RHA GLY B 325 UNP D0ZTJ5 EXPRESSION TAG SEQADV 4RHA SER B 326 UNP D0ZTJ5 EXPRESSION TAG SEQRES 1 A 146 GLY HIS VAL ALA PRO ALA PRO ALA PRO ALA PRO GLU VAL SEQRES 2 A 146 GLN THR LYS HIS PHE THR LEU LYS SER ASP VAL LEU PHE SEQRES 3 A 146 ASN PHE ASN LYS SER THR LEU LYS PRO GLU GLY GLN GLN SEQRES 4 A 146 ALA LEU ASP GLN LEU TYR SER GLN LEU SER ASN LEU ASP SEQRES 5 A 146 PRO LYS ASP GLY SER VAL VAL VAL LEU GLY PHE THR ASP SEQRES 6 A 146 ARG ILE GLY SER ASP ALA TYR ASN GLN GLY LEU SER GLU SEQRES 7 A 146 LYS ARG ALA GLN SER VAL VAL ASP TYR LEU ILE SER LYS SEQRES 8 A 146 GLY ILE PRO SER ASP LYS ILE SER ALA ARG GLY MSE GLY SEQRES 9 A 146 GLU SER ASN PRO VAL THR GLY ASN THR CYS ASP ASN VAL SEQRES 10 A 146 LYS PRO ARG ALA ALA LEU ILE ASP CYS LEU ALA PRO ASP SEQRES 11 A 146 ARG ARG VAL GLU ILE GLU VAL LYS GLY VAL LYS ASP VAL SEQRES 12 A 146 VAL GLY SER SEQRES 1 B 146 GLY HIS VAL ALA PRO ALA PRO ALA PRO ALA PRO GLU VAL SEQRES 2 B 146 GLN THR LYS HIS PHE THR LEU LYS SER ASP VAL LEU PHE SEQRES 3 B 146 ASN PHE ASN LYS SER THR LEU LYS PRO GLU GLY GLN GLN SEQRES 4 B 146 ALA LEU ASP GLN LEU TYR SER GLN LEU SER ASN LEU ASP SEQRES 5 B 146 PRO LYS ASP GLY SER VAL VAL VAL LEU GLY PHE THR ASP SEQRES 6 B 146 ARG ILE GLY SER ASP ALA TYR ASN GLN GLY LEU SER GLU SEQRES 7 B 146 LYS ARG ALA GLN SER VAL VAL ASP TYR LEU ILE SER LYS SEQRES 8 B 146 GLY ILE PRO SER ASP LYS ILE SER ALA ARG GLY MSE GLY SEQRES 9 B 146 GLU SER ASN PRO VAL THR GLY ASN THR CYS ASP ASN VAL SEQRES 10 B 146 LYS PRO ARG ALA ALA LEU ILE ASP CYS LEU ALA PRO ASP SEQRES 11 B 146 ARG ARG VAL GLU ILE GLU VAL LYS GLY VAL LYS ASP VAL SEQRES 12 B 146 VAL GLY SER MODRES 4RHA MSE A 283 MET SELENOMETHIONINE MODRES 4RHA MSE B 283 MET SELENOMETHIONINE HET MSE A 283 8 HET MSE B 283 8 HET SO4 A 401 5 HET SO4 A 402 5 HET SO4 A 403 5 HET MPD A 404 8 HET ACY A 405 4 HET SO4 A 406 5 HET SO4 B 401 5 HET SO4 B 402 5 HETNAM MSE SELENOMETHIONINE HETNAM SO4 SULFATE ION HETNAM MPD (4S)-2-METHYL-2,4-PENTANEDIOL HETNAM ACY ACETIC ACID FORMUL 1 MSE 2(C5 H11 N O2 SE) FORMUL 3 SO4 6(O4 S 2-) FORMUL 6 MPD C6 H14 O2 FORMUL 7 ACY C2 H4 O2 FORMUL 11 HOH *192(H2 O) HELIX 1 1 SER A 202 PHE A 206 1 5 HELIX 2 2 LYS A 214 SER A 229 1 16 HELIX 3 3 SER A 249 GLY A 272 1 24 HELIX 4 4 PRO A 274 ASP A 276 5 3 HELIX 5 5 PRO A 299 LEU A 307 1 9 HELIX 6 6 ALA A 308 ASP A 310 5 3 HELIX 7 7 SER B 202 PHE B 206 1 5 HELIX 8 8 LYS B 214 SER B 229 1 16 HELIX 9 9 SER B 249 GLY B 272 1 24 HELIX 10 10 PRO B 274 ASP B 276 5 3 HELIX 11 11 PRO B 299 LEU B 307 1 9 HELIX 12 12 ALA B 308 ASP B 310 5 3 SHEET 1 A 8 ILE A 278 GLY A 284 0 SHEET 2 A 8 SER A 237 PHE A 243 1 N GLY A 242 O MSE A 283 SHEET 3 A 8 ARG A 312 VAL A 320 -1 O GLU A 314 N LEU A 241 SHEET 4 A 8 VAL A 193 LYS A 201 -1 N LEU A 200 O VAL A 313 SHEET 5 A 8 GLN B 194 LYS B 201 1 O HIS B 197 N THR A 195 SHEET 6 A 8 ARG B 312 LYS B 318 -1 O VAL B 317 N LYS B 196 SHEET 7 A 8 SER B 237 PHE B 243 -1 N VAL B 239 O GLU B 316 SHEET 8 A 8 ILE B 278 GLY B 282 1 O SER B 279 N VAL B 240 SSBOND 1 CYS A 294 CYS A 306 1555 1555 2.05 SSBOND 2 CYS B 294 CYS B 306 1555 1555 2.06 LINK C GLY A 282 N MSE A 283 1555 1555 1.32 LINK C MSE A 283 N GLY A 284 1555 1555 1.32 LINK C GLY B 282 N MSE B 283 1555 1555 1.33 LINK C MSE B 283 N GLY B 284 1555 1555 1.34 CISPEP 1 LYS A 298 PRO A 299 0 -6.63 SITE 1 AC1 8 PHE A 208 ASN A 209 ARG A 260 ARG A 311 SITE 2 AC1 8 HOH A 502 HOH A 513 HOH A 516 ARG B 300 SITE 1 AC2 3 LYS A 210 SER A 211 THR A 212 SITE 1 AC3 3 GLN A 194 VAL A 317 GLY A 319 SITE 1 AC4 3 LEU A 228 GLY A 236 ILE A 273 SITE 1 AC5 2 PRO B 299 ARG B 300 SITE 1 AC6 2 VAL A 239 ARG A 281 SITE 1 AC7 9 ARG A 300 PHE B 208 ASN B 209 ARG B 260 SITE 2 AC7 9 ARG B 311 HOH B 516 HOH B 518 HOH B 557 SITE 3 AC7 9 HOH B 563 SITE 1 AC8 1 PRO B 233 CRYST1 58.627 58.627 72.746 90.00 90.00 120.00 P 32 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017057 0.009848 0.000000 0.00000 SCALE2 0.000000 0.019696 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013746 0.00000