HEADER HYDROLASE 05-OCT-14 4RI4 TITLE CRYSTAL STRUCTURE OF PTPN3 (PTPH1) Y676I MUTANT IN COMPLEX WITH TITLE 2 VANADATE COMPND MOL_ID: 1; COMPND 2 MOLECULE: TYROSINE-PROTEIN PHOSPHATASE NON-RECEPTOR TYPE 3; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: CATALYTIC DOMAIN (UNP RESIDUES 628-909); COMPND 5 EC: 3.1.3.48; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: PTPH1, PTPN3; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21 (DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID KEYWDS ALPHA BETA, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR K.-E.CHEN,T.C.MENG,A.H.-J.WANG REVDAT 3 08-NOV-23 4RI4 1 REMARK SEQADV REVDAT 2 18-JUL-18 4RI4 1 JRNL REMARK REVDAT 1 11-MAR-15 4RI4 0 JRNL AUTH K.E.CHEN,M.Y.LI,C.C.CHOU,M.R.HO,G.C.CHEN,T.C.MENG,A.H.WANG JRNL TITL SUBSTRATE SPECIFICITY AND PLASTICITY OF FERM-CONTAINING JRNL TITL 2 PROTEIN TYROSINE PHOSPHATASES. JRNL REF STRUCTURE V. 23 653 2015 JRNL REFN ISSN 1878-4186 JRNL PMID 25728925 JRNL DOI 10.1016/J.STR.2015.01.017 REMARK 2 REMARK 2 RESOLUTION. 1.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.8.4_1496) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : MLHL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 24.00 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.7 REMARK 3 NUMBER OF REFLECTIONS : 83120 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.164 REMARK 3 R VALUE (WORKING SET) : 0.163 REMARK 3 FREE R VALUE : 0.189 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.980 REMARK 3 FREE R VALUE TEST SET COUNT : 4141 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 23.9988 - 4.9454 0.97 2764 143 0.1617 0.1726 REMARK 3 2 4.9454 - 3.9309 0.97 2664 139 0.1352 0.1452 REMARK 3 3 3.9309 - 3.4356 0.97 2628 137 0.1574 0.1732 REMARK 3 4 3.4356 - 3.1222 0.99 2693 135 0.1664 0.1911 REMARK 3 5 3.1222 - 2.8989 0.99 2677 133 0.1719 0.1801 REMARK 3 6 2.8989 - 2.7282 0.99 2671 116 0.1730 0.1923 REMARK 3 7 2.7282 - 2.5917 0.99 2662 126 0.1579 0.1906 REMARK 3 8 2.5917 - 2.4790 0.99 2630 137 0.1527 0.1758 REMARK 3 9 2.4790 - 2.3837 0.99 2647 134 0.1522 0.1662 REMARK 3 10 2.3837 - 2.3015 0.99 2623 145 0.1550 0.1838 REMARK 3 11 2.3015 - 2.2296 0.99 2656 132 0.1579 0.1936 REMARK 3 12 2.2296 - 2.1659 1.00 2628 146 0.1605 0.2073 REMARK 3 13 2.1659 - 2.1089 1.00 2640 159 0.1690 0.1810 REMARK 3 14 2.1089 - 2.0575 1.00 2657 134 0.1658 0.2012 REMARK 3 15 2.0575 - 2.0107 1.00 2632 148 0.1696 0.2044 REMARK 3 16 2.0107 - 1.9680 1.00 2653 142 0.1736 0.2238 REMARK 3 17 1.9680 - 1.9286 1.00 2638 159 0.1732 0.2283 REMARK 3 18 1.9286 - 1.8922 1.00 2641 146 0.1702 0.1845 REMARK 3 19 1.8922 - 1.8585 1.00 2607 144 0.1695 0.2319 REMARK 3 20 1.8585 - 1.8270 1.00 2688 154 0.1764 0.2229 REMARK 3 21 1.8270 - 1.7975 1.00 2626 128 0.1752 0.2039 REMARK 3 22 1.7975 - 1.7699 1.00 2661 128 0.1766 0.2326 REMARK 3 23 1.7699 - 1.7438 1.00 2657 143 0.1782 0.2502 REMARK 3 24 1.7438 - 1.7193 1.00 2618 130 0.1859 0.2531 REMARK 3 25 1.7193 - 1.6961 1.00 2670 143 0.1888 0.2361 REMARK 3 26 1.6961 - 1.6740 1.00 2614 133 0.1908 0.2217 REMARK 3 27 1.6740 - 1.6531 1.00 2678 137 0.1900 0.2506 REMARK 3 28 1.6531 - 1.6332 1.00 2631 129 0.2005 0.2213 REMARK 3 29 1.6332 - 1.6142 0.98 2583 144 0.2077 0.2278 REMARK 3 30 1.6142 - 1.5961 0.82 2142 117 0.2230 0.3157 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.140 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 18.510 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.010 4724 REMARK 3 ANGLE : 1.287 6464 REMARK 3 CHIRALITY : 0.062 745 REMARK 3 PLANARITY : 0.007 833 REMARK 3 DIHEDRAL : 13.352 1792 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4RI4 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 09-OCT-14. REMARK 100 THE DEPOSITION ID IS D_1000087373. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-SEP-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSRRC REMARK 200 BEAMLINE : BL15A1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0000 REMARK 200 MONOCHROMATOR : SI 111 CHANNEL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX300HE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 83163 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.596 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 200 DATA REDUNDANCY : 7.100 REMARK 200 R MERGE (I) : 0.06000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 25.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.66 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.7 REMARK 200 DATA REDUNDANCY IN SHELL : 6.40 REMARK 200 R MERGE FOR SHELL (I) : 0.50000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASES REMARK 200 STARTING MODEL: PDB ENTRY 4RH5 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.77 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.27 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100MM TRIS-HCL, 25% PEG 8000, PH 7.5, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 67.13350 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 67.13350 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 47.43900 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 49.70300 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 47.43900 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 49.70300 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 67.13350 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 47.43900 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 49.70300 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 67.13350 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 47.43900 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 49.70300 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -23 REMARK 465 HIS A -22 REMARK 465 HIS A -21 REMARK 465 HIS A -20 REMARK 465 HIS A -19 REMARK 465 HIS A -18 REMARK 465 HIS A -17 REMARK 465 SER A -16 REMARK 465 SER A -15 REMARK 465 GLY A -14 REMARK 465 VAL A -13 REMARK 465 ASP A -12 REMARK 465 LEU A -11 REMARK 465 GLY A -10 REMARK 465 THR A -9 REMARK 465 GLU A -8 REMARK 465 ASN A -7 REMARK 465 LEU A -6 REMARK 465 TYR A -5 REMARK 465 PHE A -4 REMARK 465 GLN A -3 REMARK 465 GLN A 908 REMARK 465 MET A 909 REMARK 465 MET B -23 REMARK 465 HIS B -22 REMARK 465 HIS B -21 REMARK 465 HIS B -20 REMARK 465 HIS B -19 REMARK 465 HIS B -18 REMARK 465 HIS B -17 REMARK 465 SER B -16 REMARK 465 SER B -15 REMARK 465 GLY B -14 REMARK 465 VAL B -13 REMARK 465 ASP B -12 REMARK 465 LEU B -11 REMARK 465 GLY B -10 REMARK 465 THR B -9 REMARK 465 GLU B -8 REMARK 465 ASN B -7 REMARK 465 LEU B -6 REMARK 465 TYR B -5 REMARK 465 PHE B -4 REMARK 465 GLN B -3 REMARK 465 SER B -2 REMARK 465 ASN B -1 REMARK 465 ALA B 0 REMARK 465 MET B 909 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 SER A -2 OG REMARK 480 GLU A 642 OE1 OE2 REMARK 480 ASN A 692 CG OD1 ND2 REMARK 480 GLU A 693 CD OE1 OE2 REMARK 480 ASN B 692 CG OD1 ND2 REMARK 480 GLN B 773 CG CD OE1 NE2 REMARK 480 ASP B 778 CG OD1 OD2 REMARK 480 ASP B 834 CG OD1 OD2 REMARK 480 LYS B 876 CD CE REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 834 123.77 -30.79 REMARK 500 CYS A 842 -127.91 -116.98 REMARK 500 ILE A 846 -39.34 -132.74 REMARK 500 VAL A 885 100.70 67.96 REMARK 500 THR B 663 -50.81 -125.12 REMARK 500 SER B 835 -15.57 84.78 REMARK 500 CYS B 842 -128.50 -120.17 REMARK 500 VAL B 885 97.96 69.66 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE VO4 A 1001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE VO4 B 1001 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4RH5 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF PTPN3 (PTPH1) IN COMPLEX WITH EPS15 PTYR849 REMARK 900 PEPTIDE REMARK 900 RELATED ID: 4RH9 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF PTPN3 (PTPH1) H812F, M883G MUTANT IN COMPLEX REMARK 900 WITH EPS15 PTYR849 PEPTIDE REMARK 900 RELATED ID: 4RHG RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF PTPN3 (PTPH1) D811E, C842S MUTANT IN COMPLEX REMARK 900 WITH EPS15 PTYR849 PEPTIDE REMARK 900 RELATED ID: 4RI5 RELATED DB: PDB DBREF 4RI4 A 628 909 UNP P26045 PTN3_HUMAN 628 909 DBREF 4RI4 B 628 909 UNP P26045 PTN3_HUMAN 628 909 SEQADV 4RI4 MET A -23 UNP P26045 EXPRESSION TAG SEQADV 4RI4 HIS A -22 UNP P26045 EXPRESSION TAG SEQADV 4RI4 HIS A -21 UNP P26045 EXPRESSION TAG SEQADV 4RI4 HIS A -20 UNP P26045 EXPRESSION TAG SEQADV 4RI4 HIS A -19 UNP P26045 EXPRESSION TAG SEQADV 4RI4 HIS A -18 UNP P26045 EXPRESSION TAG SEQADV 4RI4 HIS A -17 UNP P26045 EXPRESSION TAG SEQADV 4RI4 SER A -16 UNP P26045 EXPRESSION TAG SEQADV 4RI4 SER A -15 UNP P26045 EXPRESSION TAG SEQADV 4RI4 GLY A -14 UNP P26045 EXPRESSION TAG SEQADV 4RI4 VAL A -13 UNP P26045 EXPRESSION TAG SEQADV 4RI4 ASP A -12 UNP P26045 EXPRESSION TAG SEQADV 4RI4 LEU A -11 UNP P26045 EXPRESSION TAG SEQADV 4RI4 GLY A -10 UNP P26045 EXPRESSION TAG SEQADV 4RI4 THR A -9 UNP P26045 EXPRESSION TAG SEQADV 4RI4 GLU A -8 UNP P26045 EXPRESSION TAG SEQADV 4RI4 ASN A -7 UNP P26045 EXPRESSION TAG SEQADV 4RI4 LEU A -6 UNP P26045 EXPRESSION TAG SEQADV 4RI4 TYR A -5 UNP P26045 EXPRESSION TAG SEQADV 4RI4 PHE A -4 UNP P26045 EXPRESSION TAG SEQADV 4RI4 GLN A -3 UNP P26045 EXPRESSION TAG SEQADV 4RI4 SER A -2 UNP P26045 EXPRESSION TAG SEQADV 4RI4 ASN A -1 UNP P26045 EXPRESSION TAG SEQADV 4RI4 ALA A 0 UNP P26045 EXPRESSION TAG SEQADV 4RI4 ILE A 676 UNP P26045 TYR 676 ENGINEERED MUTATION SEQADV 4RI4 MET B -23 UNP P26045 EXPRESSION TAG SEQADV 4RI4 HIS B -22 UNP P26045 EXPRESSION TAG SEQADV 4RI4 HIS B -21 UNP P26045 EXPRESSION TAG SEQADV 4RI4 HIS B -20 UNP P26045 EXPRESSION TAG SEQADV 4RI4 HIS B -19 UNP P26045 EXPRESSION TAG SEQADV 4RI4 HIS B -18 UNP P26045 EXPRESSION TAG SEQADV 4RI4 HIS B -17 UNP P26045 EXPRESSION TAG SEQADV 4RI4 SER B -16 UNP P26045 EXPRESSION TAG SEQADV 4RI4 SER B -15 UNP P26045 EXPRESSION TAG SEQADV 4RI4 GLY B -14 UNP P26045 EXPRESSION TAG SEQADV 4RI4 VAL B -13 UNP P26045 EXPRESSION TAG SEQADV 4RI4 ASP B -12 UNP P26045 EXPRESSION TAG SEQADV 4RI4 LEU B -11 UNP P26045 EXPRESSION TAG SEQADV 4RI4 GLY B -10 UNP P26045 EXPRESSION TAG SEQADV 4RI4 THR B -9 UNP P26045 EXPRESSION TAG SEQADV 4RI4 GLU B -8 UNP P26045 EXPRESSION TAG SEQADV 4RI4 ASN B -7 UNP P26045 EXPRESSION TAG SEQADV 4RI4 LEU B -6 UNP P26045 EXPRESSION TAG SEQADV 4RI4 TYR B -5 UNP P26045 EXPRESSION TAG SEQADV 4RI4 PHE B -4 UNP P26045 EXPRESSION TAG SEQADV 4RI4 GLN B -3 UNP P26045 EXPRESSION TAG SEQADV 4RI4 SER B -2 UNP P26045 EXPRESSION TAG SEQADV 4RI4 ASN B -1 UNP P26045 EXPRESSION TAG SEQADV 4RI4 ALA B 0 UNP P26045 EXPRESSION TAG SEQADV 4RI4 ILE B 676 UNP P26045 TYR 676 ENGINEERED MUTATION SEQRES 1 A 306 MET HIS HIS HIS HIS HIS HIS SER SER GLY VAL ASP LEU SEQRES 2 A 306 GLY THR GLU ASN LEU TYR PHE GLN SER ASN ALA ASP THR SEQRES 3 A 306 LEU GLU GLY SER MET ALA GLN LEU LYS LYS GLY LEU GLU SEQRES 4 A 306 SER GLY THR VAL LEU ILE GLN PHE GLU GLN LEU TYR ARG SEQRES 5 A 306 LYS LYS PRO GLY LEU ALA ILE THR PHE ALA LYS LEU PRO SEQRES 6 A 306 GLN ASN LEU ASP LYS ASN ARG ILE LYS ASP VAL LEU PRO SEQRES 7 A 306 TYR ASP THR THR ARG VAL LEU LEU GLN GLY ASN GLU ASP SEQRES 8 A 306 TYR ILE ASN ALA SER TYR VAL ASN MET GLU ILE PRO ALA SEQRES 9 A 306 ALA ASN LEU VAL ASN LYS TYR ILE ALA THR GLN GLY PRO SEQRES 10 A 306 LEU PRO HIS THR CYS ALA GLN PHE TRP GLN VAL VAL TRP SEQRES 11 A 306 ASP GLN LYS LEU SER LEU ILE VAL MET LEU THR THR LEU SEQRES 12 A 306 THR GLU ARG GLY ARG THR LYS CYS HIS GLN TYR TRP PRO SEQRES 13 A 306 ASP PRO PRO ASP VAL MET ASN HIS GLY GLY PHE HIS ILE SEQRES 14 A 306 GLN CYS GLN SER GLU ASP CYS THR ILE ALA TYR VAL SER SEQRES 15 A 306 ARG GLU MET LEU VAL THR ASN THR GLN THR GLY GLU GLU SEQRES 16 A 306 HIS THR VAL THR HIS LEU GLN TYR VAL ALA TRP PRO ASP SEQRES 17 A 306 HIS GLY VAL PRO ASP ASP SER SER ASP PHE LEU GLU PHE SEQRES 18 A 306 VAL ASN TYR VAL ARG SER LEU ARG VAL ASP SER GLU PRO SEQRES 19 A 306 VAL LEU VAL HIS CYS SER ALA GLY ILE GLY ARG THR GLY SEQRES 20 A 306 VAL LEU VAL THR MET GLU THR ALA MET CYS LEU THR GLU SEQRES 21 A 306 ARG ASN LEU PRO ILE TYR PRO LEU ASP ILE VAL ARG LYS SEQRES 22 A 306 MET ARG ASP GLN ARG ALA MET MET VAL GLN THR SER SER SEQRES 23 A 306 GLN TYR LYS PHE VAL CYS GLU ALA ILE LEU ARG VAL TYR SEQRES 24 A 306 GLU GLU GLY LEU VAL GLN MET SEQRES 1 B 306 MET HIS HIS HIS HIS HIS HIS SER SER GLY VAL ASP LEU SEQRES 2 B 306 GLY THR GLU ASN LEU TYR PHE GLN SER ASN ALA ASP THR SEQRES 3 B 306 LEU GLU GLY SER MET ALA GLN LEU LYS LYS GLY LEU GLU SEQRES 4 B 306 SER GLY THR VAL LEU ILE GLN PHE GLU GLN LEU TYR ARG SEQRES 5 B 306 LYS LYS PRO GLY LEU ALA ILE THR PHE ALA LYS LEU PRO SEQRES 6 B 306 GLN ASN LEU ASP LYS ASN ARG ILE LYS ASP VAL LEU PRO SEQRES 7 B 306 TYR ASP THR THR ARG VAL LEU LEU GLN GLY ASN GLU ASP SEQRES 8 B 306 TYR ILE ASN ALA SER TYR VAL ASN MET GLU ILE PRO ALA SEQRES 9 B 306 ALA ASN LEU VAL ASN LYS TYR ILE ALA THR GLN GLY PRO SEQRES 10 B 306 LEU PRO HIS THR CYS ALA GLN PHE TRP GLN VAL VAL TRP SEQRES 11 B 306 ASP GLN LYS LEU SER LEU ILE VAL MET LEU THR THR LEU SEQRES 12 B 306 THR GLU ARG GLY ARG THR LYS CYS HIS GLN TYR TRP PRO SEQRES 13 B 306 ASP PRO PRO ASP VAL MET ASN HIS GLY GLY PHE HIS ILE SEQRES 14 B 306 GLN CYS GLN SER GLU ASP CYS THR ILE ALA TYR VAL SER SEQRES 15 B 306 ARG GLU MET LEU VAL THR ASN THR GLN THR GLY GLU GLU SEQRES 16 B 306 HIS THR VAL THR HIS LEU GLN TYR VAL ALA TRP PRO ASP SEQRES 17 B 306 HIS GLY VAL PRO ASP ASP SER SER ASP PHE LEU GLU PHE SEQRES 18 B 306 VAL ASN TYR VAL ARG SER LEU ARG VAL ASP SER GLU PRO SEQRES 19 B 306 VAL LEU VAL HIS CYS SER ALA GLY ILE GLY ARG THR GLY SEQRES 20 B 306 VAL LEU VAL THR MET GLU THR ALA MET CYS LEU THR GLU SEQRES 21 B 306 ARG ASN LEU PRO ILE TYR PRO LEU ASP ILE VAL ARG LYS SEQRES 22 B 306 MET ARG ASP GLN ARG ALA MET MET VAL GLN THR SER SER SEQRES 23 B 306 GLN TYR LYS PHE VAL CYS GLU ALA ILE LEU ARG VAL TYR SEQRES 24 B 306 GLU GLU GLY LEU VAL GLN MET HET VO4 A1001 5 HET VO4 B1001 5 HETNAM VO4 VANADATE ION FORMUL 3 VO4 2(O4 V 3-) FORMUL 5 HOH *535(H2 O) HELIX 1 1 THR A 629 GLY A 644 1 16 HELIX 2 2 GLY A 644 LEU A 653 1 10 HELIX 3 3 THR A 663 ASN A 674 5 12 HELIX 4 4 PRO A 706 ASN A 709 5 4 HELIX 5 5 LEU A 721 HIS A 723 5 3 HELIX 6 6 THR A 724 GLN A 735 1 12 HELIX 7 7 ASP A 817 ARG A 832 1 16 HELIX 8 8 ILE A 846 ARG A 864 1 19 HELIX 9 9 TYR A 869 ASP A 879 1 11 HELIX 10 10 THR A 887 VAL A 907 1 21 HELIX 11 11 THR B 629 GLY B 644 1 16 HELIX 12 12 GLY B 644 LEU B 653 1 10 HELIX 13 13 THR B 663 LEU B 667 5 5 HELIX 14 14 ASN B 670 ASN B 674 5 5 HELIX 15 15 PRO B 706 ASN B 709 5 4 HELIX 16 16 LEU B 721 HIS B 723 5 3 HELIX 17 17 THR B 724 LYS B 736 1 13 HELIX 18 18 ASP B 817 ARG B 832 1 16 HELIX 19 19 ILE B 846 GLU B 863 1 18 HELIX 20 20 TYR B 869 ASP B 879 1 11 HELIX 21 21 THR B 887 GLN B 908 1 22 SHEET 1 A 9 ARG A 686 LEU A 688 0 SHEET 2 A 9 TYR A 695 ILE A 705 -1 O ALA A 698 N VAL A 687 SHEET 3 A 9 LEU A 710 THR A 717 -1 O LEU A 710 N ILE A 705 SHEET 4 A 9 VAL A 838 HIS A 841 1 O VAL A 840 N ILE A 715 SHEET 5 A 9 LEU A 739 MET A 742 1 N VAL A 741 O LEU A 839 SHEET 6 A 9 GLU A 798 TYR A 806 1 O LEU A 804 N MET A 742 SHEET 7 A 9 TYR A 783 ASN A 792 -1 N VAL A 790 O HIS A 799 SHEET 8 A 9 PHE A 770 CYS A 779 -1 N GLN A 775 O GLU A 787 SHEET 9 A 9 VAL A 764 HIS A 767 -1 N MET A 765 O ILE A 772 SHEET 1 B 2 THR A 747 GLU A 748 0 SHEET 2 B 2 ARG A 751 THR A 752 -1 O ARG A 751 N GLU A 748 SHEET 1 C 9 ARG B 686 LEU B 688 0 SHEET 2 C 9 TYR B 695 ILE B 705 -1 O ALA B 698 N VAL B 687 SHEET 3 C 9 LEU B 710 THR B 717 -1 O LEU B 710 N ILE B 705 SHEET 4 C 9 VAL B 838 HIS B 841 1 O VAL B 840 N ILE B 715 SHEET 5 C 9 LEU B 739 MET B 742 1 N VAL B 741 O LEU B 839 SHEET 6 C 9 GLU B 798 TYR B 806 1 O LEU B 804 N MET B 742 SHEET 7 C 9 TYR B 783 ASN B 792 -1 N VAL B 790 O HIS B 799 SHEET 8 C 9 PHE B 770 CYS B 779 -1 N HIS B 771 O THR B 791 SHEET 9 C 9 VAL B 764 HIS B 767 -1 N MET B 765 O ILE B 772 SHEET 1 D 2 THR B 747 GLU B 748 0 SHEET 2 D 2 ARG B 751 THR B 752 -1 O ARG B 751 N GLU B 748 CISPEP 1 PRO A 761 PRO A 762 0 5.36 CISPEP 2 PRO B 761 PRO B 762 0 -5.94 SITE 1 AC1 11 ASP A 811 CYS A 842 SER A 843 ALA A 844 SITE 2 AC1 11 GLY A 845 ILE A 846 GLY A 847 ARG A 848 SITE 3 AC1 11 GLN A 886 HOH A1101 HOH A1150 SITE 1 AC2 11 ASP B 811 CYS B 842 SER B 843 ALA B 844 SITE 2 AC2 11 GLY B 845 ILE B 846 GLY B 847 ARG B 848 SITE 3 AC2 11 GLN B 886 HOH B1114 HOH B1153 CRYST1 94.878 99.406 134.267 90.00 90.00 90.00 C 2 2 21 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010540 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010060 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007448 0.00000