data_4RN7 # _entry.id 4RN7 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.287 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code RCSB RCSB087554 PDB 4RN7 WWPDB D_1000087554 # _pdbx_database_related.db_name TargetTrack _pdbx_database_related.db_id CSGID-IDP05258 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4RN7 _pdbx_database_status.recvd_initial_deposition_date 2014-10-23 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Tan, K.' 1 'Mulligan, R.' 2 'Kwon, K.' 3 'Anderson, W.F.' 4 'Joachimiak, A.' 5 'Center for Structural Genomics of Infectious Diseases (CSGID)' 6 # _citation.id primary _citation.title 'The crystal structure of N-acetylmuramoyl-L-alanine amidase from Clostridium difficile 630' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Tan, K.' 1 primary 'Mulligan, R.' 2 primary 'Kwon, K.' 3 primary 'Anderson, W.F.' 4 primary 'Joachimiak, A.' 5 # _cell.entry_id 4RN7 _cell.length_a 66.407 _cell.length_b 66.407 _cell.length_c 96.200 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4RN7 _symmetry.space_group_name_H-M 'P 32 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'N-acetylmuramoyl-L-alanine amidase' 20886.156 1 3.5.1.28 ? 'UNP residues 117-301' ? 2 non-polymer syn 'ZINC ION' 65.409 1 ? ? ? ? 3 non-polymer syn GLYCEROL 92.094 1 ? ? ? ? 4 non-polymer syn '4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID' 238.305 2 ? ? ? ? 5 non-polymer syn 'FORMIC ACID' 46.025 2 ? ? ? ? 6 water nat water 18.015 123 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;SNAYTVFIDPGHGGNDKGTESKTSNRYEKDLNLQIAKKLANKLSKQKDIQVVVSRTDDTYISLKDRAILANNSSADVLVS IHLNAEKNGNTATGIETWYRNKATDGSKELAQTVQSTIVSYVKVRDRGIVENNFEVLRESN(MSE)PAILIECGFLTTPS EEQKIINEKYQDQLAEGIVQGVLSYLDSKGNK ; _entity_poly.pdbx_seq_one_letter_code_can ;SNAYTVFIDPGHGGNDKGTESKTSNRYEKDLNLQIAKKLANKLSKQKDIQVVVSRTDDTYISLKDRAILANNSSADVLVS IHLNAEKNGNTATGIETWYRNKATDGSKELAQTVQSTIVSYVKVRDRGIVENNFEVLRESNMPAILIECGFLTTPSEEQK IINEKYQDQLAEGIVQGVLSYLDSKGNK ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier CSGID-IDP05258 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 ASN n 1 3 ALA n 1 4 TYR n 1 5 THR n 1 6 VAL n 1 7 PHE n 1 8 ILE n 1 9 ASP n 1 10 PRO n 1 11 GLY n 1 12 HIS n 1 13 GLY n 1 14 GLY n 1 15 ASN n 1 16 ASP n 1 17 LYS n 1 18 GLY n 1 19 THR n 1 20 GLU n 1 21 SER n 1 22 LYS n 1 23 THR n 1 24 SER n 1 25 ASN n 1 26 ARG n 1 27 TYR n 1 28 GLU n 1 29 LYS n 1 30 ASP n 1 31 LEU n 1 32 ASN n 1 33 LEU n 1 34 GLN n 1 35 ILE n 1 36 ALA n 1 37 LYS n 1 38 LYS n 1 39 LEU n 1 40 ALA n 1 41 ASN n 1 42 LYS n 1 43 LEU n 1 44 SER n 1 45 LYS n 1 46 GLN n 1 47 LYS n 1 48 ASP n 1 49 ILE n 1 50 GLN n 1 51 VAL n 1 52 VAL n 1 53 VAL n 1 54 SER n 1 55 ARG n 1 56 THR n 1 57 ASP n 1 58 ASP n 1 59 THR n 1 60 TYR n 1 61 ILE n 1 62 SER n 1 63 LEU n 1 64 LYS n 1 65 ASP n 1 66 ARG n 1 67 ALA n 1 68 ILE n 1 69 LEU n 1 70 ALA n 1 71 ASN n 1 72 ASN n 1 73 SER n 1 74 SER n 1 75 ALA n 1 76 ASP n 1 77 VAL n 1 78 LEU n 1 79 VAL n 1 80 SER n 1 81 ILE n 1 82 HIS n 1 83 LEU n 1 84 ASN n 1 85 ALA n 1 86 GLU n 1 87 LYS n 1 88 ASN n 1 89 GLY n 1 90 ASN n 1 91 THR n 1 92 ALA n 1 93 THR n 1 94 GLY n 1 95 ILE n 1 96 GLU n 1 97 THR n 1 98 TRP n 1 99 TYR n 1 100 ARG n 1 101 ASN n 1 102 LYS n 1 103 ALA n 1 104 THR n 1 105 ASP n 1 106 GLY n 1 107 SER n 1 108 LYS n 1 109 GLU n 1 110 LEU n 1 111 ALA n 1 112 GLN n 1 113 THR n 1 114 VAL n 1 115 GLN n 1 116 SER n 1 117 THR n 1 118 ILE n 1 119 VAL n 1 120 SER n 1 121 TYR n 1 122 VAL n 1 123 LYS n 1 124 VAL n 1 125 ARG n 1 126 ASP n 1 127 ARG n 1 128 GLY n 1 129 ILE n 1 130 VAL n 1 131 GLU n 1 132 ASN n 1 133 ASN n 1 134 PHE n 1 135 GLU n 1 136 VAL n 1 137 LEU n 1 138 ARG n 1 139 GLU n 1 140 SER n 1 141 ASN n 1 142 MSE n 1 143 PRO n 1 144 ALA n 1 145 ILE n 1 146 LEU n 1 147 ILE n 1 148 GLU n 1 149 CYS n 1 150 GLY n 1 151 PHE n 1 152 LEU n 1 153 THR n 1 154 THR n 1 155 PRO n 1 156 SER n 1 157 GLU n 1 158 GLU n 1 159 GLN n 1 160 LYS n 1 161 ILE n 1 162 ILE n 1 163 ASN n 1 164 GLU n 1 165 LYS n 1 166 TYR n 1 167 GLN n 1 168 ASP n 1 169 GLN n 1 170 LEU n 1 171 ALA n 1 172 GLU n 1 173 GLY n 1 174 ILE n 1 175 VAL n 1 176 GLN n 1 177 GLY n 1 178 VAL n 1 179 LEU n 1 180 SER n 1 181 TYR n 1 182 LEU n 1 183 ASP n 1 184 SER n 1 185 LYS n 1 186 GLY n 1 187 ASN n 1 188 LYS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene CD630_27610 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 630 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Peptoclostridium difficile' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 272563 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)magic' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pMCSG7 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q183J9_PEPD6 _struct_ref.pdbx_db_accession Q183J9 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;YTVFIDPGHGGNDKGTESKTSNRYEKDLNLQIAKKLANKLSKQKDIQVVVSRTDDTYISLKDRAILANNSSADVLVSIHL NAEKNGNTATGIETWYRNKATDGSKELAQTVQSTIVSYVKVRDRGIVENNFEVLRESNMPAILIECGFLTTPSEEQKIIN EKYQDQLAEGIVQGVLSYLDSKGNK ; _struct_ref.pdbx_align_begin 117 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 4RN7 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 4 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 188 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q183J9 _struct_ref_seq.db_align_beg 117 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 301 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 117 _struct_ref_seq.pdbx_auth_seq_align_end 301 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4RN7 SER A 1 ? UNP Q183J9 ? ? 'EXPRESSION TAG' 114 1 1 4RN7 ASN A 2 ? UNP Q183J9 ? ? 'EXPRESSION TAG' 115 2 1 4RN7 ALA A 3 ? UNP Q183J9 ? ? 'EXPRESSION TAG' 116 3 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 EPE non-polymer . '4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID' HEPES 'C8 H18 N2 O4 S' 238.305 FMT non-polymer . 'FORMIC ACID' ? 'C H2 O2' 46.025 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 ZN non-polymer . 'ZINC ION' ? 'Zn 2' 65.409 # _exptl.entry_id 4RN7 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.93 _exptl_crystal.density_percent_sol 58.04 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp 289 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.pdbx_details '0.1M HEPES, 25% w/v PEG3350, pH 7.5, VAPOR DIFFUSION, SITTING DROP, temperature 289K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315r' _diffrn_detector.pdbx_collection_date 2013-03-18 _diffrn_detector.details mirror # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Si 111 crystal' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97899 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 19-ID' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 19-ID _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.97899 # _reflns.entry_id 4RN7 _reflns.observed_criterion_sigma_I -5 _reflns.observed_criterion_sigma_F 0 _reflns.d_resolution_low 28.8 _reflns.d_resolution_high 1.72 _reflns.number_obs 26769 _reflns.number_all 26769 _reflns.percent_possible_obs 99.8 _reflns.pdbx_Rmerge_I_obs 0.055 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 54.7 _reflns.B_iso_Wilson_estimate 27.45 _reflns.pdbx_redundancy 8.3 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 1.72 _reflns_shell.d_res_low 1.75 _reflns_shell.percent_possible_all 100 _reflns_shell.Rmerge_I_obs 0.717 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 3.3 _reflns_shell.pdbx_redundancy 8.4 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 1344 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 4RN7 _refine.ls_number_reflns_obs 26718 _refine.ls_number_reflns_all 26718 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.34 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 28.755 _refine.ls_d_res_high 1.717 _refine.ls_percent_reflns_obs 99.73 _refine.ls_R_factor_obs 0.1959 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.1948 _refine.ls_R_factor_R_free 0.2153 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.95 _refine.ls_number_reflns_R_free 1322 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details random _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.17 _refine.pdbx_overall_phase_error 23.97 _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1426 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 29 _refine_hist.number_atoms_solvent 123 _refine_hist.number_atoms_total 1578 _refine_hist.d_res_high 1.717 _refine_hist.d_res_low 28.755 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id f_bond_d 0.006 ? ? 1520 ? 'X-RAY DIFFRACTION' f_angle_d 0.988 ? ? 2067 ? 'X-RAY DIFFRACTION' f_dihedral_angle_d 13.634 ? ? 578 ? 'X-RAY DIFFRACTION' f_chiral_restr 0.068 ? ? 240 ? 'X-RAY DIFFRACTION' f_plane_restr 0.003 ? ? 270 ? 'X-RAY DIFFRACTION' # loop_ _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.pdbx_refine_id . 1.7171 1.7858 2768 0.2470 100.00 0.2845 . . 158 . . . . 'X-RAY DIFFRACTION' . 1.7858 1.8671 2793 0.2340 100.00 0.2898 . . 125 . . . . 'X-RAY DIFFRACTION' . 1.8671 1.9655 2770 0.2228 100.00 0.2850 . . 176 . . . . 'X-RAY DIFFRACTION' . 1.9655 2.0886 2807 0.2096 100.00 0.2542 . . 138 . . . . 'X-RAY DIFFRACTION' . 2.0886 2.2498 2830 0.1953 100.00 0.1870 . . 119 . . . . 'X-RAY DIFFRACTION' . 2.2498 2.4761 2787 0.1989 100.00 0.2281 . . 163 . . . . 'X-RAY DIFFRACTION' . 2.4761 2.8342 2851 0.2091 100.00 0.2150 . . 133 . . . . 'X-RAY DIFFRACTION' . 2.8342 3.5697 2864 0.1928 100.00 0.2301 . . 146 . . . . 'X-RAY DIFFRACTION' . 3.5697 28.7591 2926 0.1792 98.00 0.1870 . . 164 . . . . 'X-RAY DIFFRACTION' # _struct.entry_id 4RN7 _struct.title 'The crystal structure of N-acetylmuramoyl-L-alanine amidase from Clostridium difficile 630' _struct.pdbx_descriptor 'N-acetylmuramoyl-L-alanine amidase (E.C.3.5.1.28)' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4RN7 _struct_keywords.pdbx_keywords HYDROLASE _struct_keywords.text 'structural genomics, Center for Structural Genomics of Infectious Diseases, CSGID, HYDROLASE' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 4 ? F N N 5 ? G N N 5 ? H N N 6 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 TYR A 27 ? LYS A 45 ? TYR A 140 LYS A 158 1 ? 19 HELX_P HELX_P2 2 SER A 62 ? SER A 73 ? SER A 175 SER A 186 1 ? 12 HELX_P HELX_P3 3 GLY A 106 ? LYS A 123 ? GLY A 219 LYS A 236 1 ? 18 HELX_P HELX_P4 4 PHE A 134 ? SER A 140 ? PHE A 247 SER A 253 1 ? 7 HELX_P HELX_P5 5 THR A 154 ? ILE A 162 ? THR A 267 ILE A 275 1 ? 9 HELX_P HELX_P6 6 ASN A 163 ? GLY A 186 ? ASN A 276 GLY A 299 1 ? 24 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale1 covale ? ? A ASN 141 C ? ? ? 1_555 A MSE 142 N ? ? A ASN 254 A MSE 255 1_555 ? ? ? ? ? ? ? 1.325 ? covale2 covale ? ? A MSE 142 C ? ? ? 1_555 A PRO 143 N ? ? A MSE 255 A PRO 256 1_555 ? ? ? ? ? ? ? 1.349 ? metalc1 metalc ? ? A HIS 82 ND1 ? ? ? 1_555 B ZN . ZN ? ? A HIS 195 A ZN 401 1_555 ? ? ? ? ? ? ? 2.082 ? metalc2 metalc ? ? A HIS 12 NE2 ? ? ? 1_555 B ZN . ZN ? ? A HIS 125 A ZN 401 1_555 ? ? ? ? ? ? ? 2.125 ? metalc3 metalc ? ? A GLU 28 OE2 ? ? ? 1_555 B ZN . ZN ? ? A GLU 141 A ZN 401 1_555 ? ? ? ? ? ? ? 2.129 ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 6 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? parallel A 3 4 ? parallel A 4 5 ? anti-parallel A 5 6 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ILE A 49 ? VAL A 53 ? ILE A 162 VAL A 166 A 2 TYR A 4 ? PRO A 10 ? TYR A 117 PRO A 123 A 3 VAL A 77 ? ASN A 84 ? VAL A 190 ASN A 197 A 4 ALA A 144 ? PHE A 151 ? ALA A 257 PHE A 264 A 5 ILE A 95 ? TYR A 99 ? ILE A 208 TYR A 212 A 6 ASP A 126 ? GLU A 131 ? ASP A 239 GLU A 244 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O VAL A 52 ? O VAL A 165 N ILE A 8 ? N ILE A 121 A 2 3 N ASP A 9 ? N ASP A 122 O VAL A 79 ? O VAL A 192 A 3 4 N SER A 80 ? N SER A 193 O ILE A 147 ? O ILE A 260 A 4 5 O LEU A 146 ? O LEU A 259 N TRP A 98 ? N TRP A 211 A 5 6 N THR A 97 ? N THR A 210 O VAL A 130 ? O VAL A 243 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 4 'BINDING SITE FOR RESIDUE ZN A 401' AC2 Software ? ? ? ? 2 'BINDING SITE FOR RESIDUE GOL A 402' AC3 Software ? ? ? ? 7 'BINDING SITE FOR RESIDUE EPE A 403' AC4 Software ? ? ? ? 3 'BINDING SITE FOR RESIDUE EPE A 404' AC5 Software ? ? ? ? 4 'BINDING SITE FOR RESIDUE FMT A 405' AC6 Software ? ? ? ? 2 'BINDING SITE FOR RESIDUE FMT A 406' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 4 SER A 1 ? SER A 114 . ? 3_455 ? 2 AC1 4 HIS A 12 ? HIS A 125 . ? 1_555 ? 3 AC1 4 GLU A 28 ? GLU A 141 . ? 1_555 ? 4 AC1 4 HIS A 82 ? HIS A 195 . ? 1_555 ? 5 AC2 2 LYS A 47 ? LYS A 160 . ? 1_555 ? 6 AC2 2 ASP A 48 ? ASP A 161 . ? 1_555 ? 7 AC3 7 ARG A 100 ? ARG A 213 . ? 1_555 ? 8 AC3 7 LYS A 102 ? LYS A 215 . ? 1_555 ? 9 AC3 7 ALA A 103 ? ALA A 216 . ? 1_555 ? 10 AC3 7 THR A 104 ? THR A 217 . ? 1_555 ? 11 AC3 7 ASP A 105 ? ASP A 218 . ? 1_555 ? 12 AC3 7 TYR A 121 ? TYR A 234 . ? 6_454 ? 13 AC3 7 SER A 140 ? SER A 253 . ? 1_555 ? 14 AC4 3 GLU A 86 ? GLU A 199 . ? 1_555 ? 15 AC4 3 ARG A 127 ? ARG A 240 . ? 1_555 ? 16 AC4 3 HOH H . ? HOH A 503 . ? 1_555 ? 17 AC5 4 ALA A 3 ? ALA A 116 . ? 3_455 ? 18 AC5 4 GLN A 50 ? GLN A 163 . ? 3_455 ? 19 AC5 4 ALA A 85 ? ALA A 198 . ? 1_555 ? 20 AC5 4 HOH H . ? HOH A 581 . ? 3_455 ? 21 AC6 2 GLN A 50 ? GLN A 163 . ? 1_555 ? 22 AC6 2 SER A 73 ? SER A 186 . ? 1_555 ? # _database_PDB_matrix.entry_id 4RN7 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 4RN7 _atom_sites.fract_transf_matrix[1][1] 0.015059 _atom_sites.fract_transf_matrix[1][2] 0.008694 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.017388 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.010395 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S SE ZN # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 114 114 SER SER A . n A 1 2 ASN 2 115 115 ASN ASN A . n A 1 3 ALA 3 116 116 ALA ALA A . n A 1 4 TYR 4 117 117 TYR TYR A . n A 1 5 THR 5 118 118 THR THR A . n A 1 6 VAL 6 119 119 VAL VAL A . n A 1 7 PHE 7 120 120 PHE PHE A . n A 1 8 ILE 8 121 121 ILE ILE A . n A 1 9 ASP 9 122 122 ASP ASP A . n A 1 10 PRO 10 123 123 PRO PRO A . n A 1 11 GLY 11 124 124 GLY GLY A . n A 1 12 HIS 12 125 125 HIS HIS A . n A 1 13 GLY 13 126 126 GLY GLY A . n A 1 14 GLY 14 127 127 GLY GLY A . n A 1 15 ASN 15 128 128 ASN ASN A . n A 1 16 ASP 16 129 129 ASP ASP A . n A 1 17 LYS 17 130 130 LYS LYS A . n A 1 18 GLY 18 131 131 GLY GLY A . n A 1 19 THR 19 132 132 THR THR A . n A 1 20 GLU 20 133 133 GLU GLU A . n A 1 21 SER 21 134 134 SER SER A . n A 1 22 LYS 22 135 135 LYS LYS A . n A 1 23 THR 23 136 136 THR THR A . n A 1 24 SER 24 137 137 SER SER A . n A 1 25 ASN 25 138 138 ASN ASN A . n A 1 26 ARG 26 139 139 ARG ARG A . n A 1 27 TYR 27 140 140 TYR TYR A . n A 1 28 GLU 28 141 141 GLU GLU A . n A 1 29 LYS 29 142 142 LYS LYS A . n A 1 30 ASP 30 143 143 ASP ASP A . n A 1 31 LEU 31 144 144 LEU LEU A . n A 1 32 ASN 32 145 145 ASN ASN A . n A 1 33 LEU 33 146 146 LEU LEU A . n A 1 34 GLN 34 147 147 GLN GLN A . n A 1 35 ILE 35 148 148 ILE ILE A . n A 1 36 ALA 36 149 149 ALA ALA A . n A 1 37 LYS 37 150 150 LYS LYS A . n A 1 38 LYS 38 151 151 LYS LYS A . n A 1 39 LEU 39 152 152 LEU LEU A . n A 1 40 ALA 40 153 153 ALA ALA A . n A 1 41 ASN 41 154 154 ASN ASN A . n A 1 42 LYS 42 155 155 LYS LYS A . n A 1 43 LEU 43 156 156 LEU LEU A . n A 1 44 SER 44 157 157 SER SER A . n A 1 45 LYS 45 158 158 LYS LYS A . n A 1 46 GLN 46 159 159 GLN GLN A . n A 1 47 LYS 47 160 160 LYS LYS A . n A 1 48 ASP 48 161 161 ASP ASP A . n A 1 49 ILE 49 162 162 ILE ILE A . n A 1 50 GLN 50 163 163 GLN GLN A . n A 1 51 VAL 51 164 164 VAL VAL A . n A 1 52 VAL 52 165 165 VAL VAL A . n A 1 53 VAL 53 166 166 VAL VAL A . n A 1 54 SER 54 167 167 SER SER A . n A 1 55 ARG 55 168 168 ARG ARG A . n A 1 56 THR 56 169 169 THR THR A . n A 1 57 ASP 57 170 170 ASP ASP A . n A 1 58 ASP 58 171 171 ASP ASP A . n A 1 59 THR 59 172 172 THR THR A . n A 1 60 TYR 60 173 173 TYR TYR A . n A 1 61 ILE 61 174 174 ILE ILE A . n A 1 62 SER 62 175 175 SER SER A . n A 1 63 LEU 63 176 176 LEU LEU A . n A 1 64 LYS 64 177 177 LYS LYS A . n A 1 65 ASP 65 178 178 ASP ASP A . n A 1 66 ARG 66 179 179 ARG ARG A . n A 1 67 ALA 67 180 180 ALA ALA A . n A 1 68 ILE 68 181 181 ILE ILE A . n A 1 69 LEU 69 182 182 LEU LEU A . n A 1 70 ALA 70 183 183 ALA ALA A . n A 1 71 ASN 71 184 184 ASN ASN A . n A 1 72 ASN 72 185 185 ASN ASN A . n A 1 73 SER 73 186 186 SER SER A . n A 1 74 SER 74 187 187 SER SER A . n A 1 75 ALA 75 188 188 ALA ALA A . n A 1 76 ASP 76 189 189 ASP ASP A . n A 1 77 VAL 77 190 190 VAL VAL A . n A 1 78 LEU 78 191 191 LEU LEU A . n A 1 79 VAL 79 192 192 VAL VAL A . n A 1 80 SER 80 193 193 SER SER A . n A 1 81 ILE 81 194 194 ILE ILE A . n A 1 82 HIS 82 195 195 HIS HIS A . n A 1 83 LEU 83 196 196 LEU LEU A . n A 1 84 ASN 84 197 197 ASN ASN A . n A 1 85 ALA 85 198 198 ALA ALA A . n A 1 86 GLU 86 199 199 GLU GLU A . n A 1 87 LYS 87 200 200 LYS LYS A . n A 1 88 ASN 88 201 201 ASN ASN A . n A 1 89 GLY 89 202 202 GLY GLY A . n A 1 90 ASN 90 203 203 ASN ASN A . n A 1 91 THR 91 204 204 THR THR A . n A 1 92 ALA 92 205 205 ALA ALA A . n A 1 93 THR 93 206 206 THR THR A . n A 1 94 GLY 94 207 207 GLY GLY A . n A 1 95 ILE 95 208 208 ILE ILE A . n A 1 96 GLU 96 209 209 GLU GLU A . n A 1 97 THR 97 210 210 THR THR A . n A 1 98 TRP 98 211 211 TRP TRP A . n A 1 99 TYR 99 212 212 TYR TYR A . n A 1 100 ARG 100 213 213 ARG ARG A . n A 1 101 ASN 101 214 214 ASN ASN A . n A 1 102 LYS 102 215 215 LYS LYS A . n A 1 103 ALA 103 216 216 ALA ALA A . n A 1 104 THR 104 217 217 THR THR A . n A 1 105 ASP 105 218 218 ASP ASP A . n A 1 106 GLY 106 219 219 GLY GLY A . n A 1 107 SER 107 220 220 SER SER A . n A 1 108 LYS 108 221 221 LYS LYS A . n A 1 109 GLU 109 222 222 GLU GLU A . n A 1 110 LEU 110 223 223 LEU LEU A . n A 1 111 ALA 111 224 224 ALA ALA A . n A 1 112 GLN 112 225 225 GLN GLN A . n A 1 113 THR 113 226 226 THR THR A . n A 1 114 VAL 114 227 227 VAL VAL A . n A 1 115 GLN 115 228 228 GLN GLN A . n A 1 116 SER 116 229 229 SER SER A . n A 1 117 THR 117 230 230 THR THR A . n A 1 118 ILE 118 231 231 ILE ILE A . n A 1 119 VAL 119 232 232 VAL VAL A . n A 1 120 SER 120 233 233 SER SER A . n A 1 121 TYR 121 234 234 TYR TYR A . n A 1 122 VAL 122 235 235 VAL VAL A . n A 1 123 LYS 123 236 236 LYS LYS A . n A 1 124 VAL 124 237 237 VAL VAL A . n A 1 125 ARG 125 238 238 ARG ARG A . n A 1 126 ASP 126 239 239 ASP ASP A . n A 1 127 ARG 127 240 240 ARG ARG A . n A 1 128 GLY 128 241 241 GLY GLY A . n A 1 129 ILE 129 242 242 ILE ILE A . n A 1 130 VAL 130 243 243 VAL VAL A . n A 1 131 GLU 131 244 244 GLU GLU A . n A 1 132 ASN 132 245 245 ASN ASN A . n A 1 133 ASN 133 246 246 ASN ASN A . n A 1 134 PHE 134 247 247 PHE PHE A . n A 1 135 GLU 135 248 248 GLU GLU A . n A 1 136 VAL 136 249 249 VAL VAL A . n A 1 137 LEU 137 250 250 LEU LEU A . n A 1 138 ARG 138 251 251 ARG ARG A . n A 1 139 GLU 139 252 252 GLU GLU A . n A 1 140 SER 140 253 253 SER SER A . n A 1 141 ASN 141 254 254 ASN ASN A . n A 1 142 MSE 142 255 255 MSE MSE A . n A 1 143 PRO 143 256 256 PRO PRO A . n A 1 144 ALA 144 257 257 ALA ALA A . n A 1 145 ILE 145 258 258 ILE ILE A . n A 1 146 LEU 146 259 259 LEU LEU A . n A 1 147 ILE 147 260 260 ILE ILE A . n A 1 148 GLU 148 261 261 GLU GLU A . n A 1 149 CYS 149 262 262 CYS CYS A . n A 1 150 GLY 150 263 263 GLY GLY A . n A 1 151 PHE 151 264 264 PHE PHE A . n A 1 152 LEU 152 265 265 LEU LEU A . n A 1 153 THR 153 266 266 THR THR A . n A 1 154 THR 154 267 267 THR THR A . n A 1 155 PRO 155 268 268 PRO PRO A . n A 1 156 SER 156 269 269 SER SER A . n A 1 157 GLU 157 270 270 GLU GLU A . n A 1 158 GLU 158 271 271 GLU GLU A . n A 1 159 GLN 159 272 272 GLN GLN A . n A 1 160 LYS 160 273 273 LYS LYS A . n A 1 161 ILE 161 274 274 ILE ILE A . n A 1 162 ILE 162 275 275 ILE ILE A . n A 1 163 ASN 163 276 276 ASN ASN A . n A 1 164 GLU 164 277 277 GLU GLU A . n A 1 165 LYS 165 278 278 LYS LYS A . n A 1 166 TYR 166 279 279 TYR TYR A . n A 1 167 GLN 167 280 280 GLN GLN A . n A 1 168 ASP 168 281 281 ASP ASP A . n A 1 169 GLN 169 282 282 GLN GLN A . n A 1 170 LEU 170 283 283 LEU LEU A . n A 1 171 ALA 171 284 284 ALA ALA A . n A 1 172 GLU 172 285 285 GLU GLU A . n A 1 173 GLY 173 286 286 GLY GLY A . n A 1 174 ILE 174 287 287 ILE ILE A . n A 1 175 VAL 175 288 288 VAL VAL A . n A 1 176 GLN 176 289 289 GLN GLN A . n A 1 177 GLY 177 290 290 GLY GLY A . n A 1 178 VAL 178 291 291 VAL VAL A . n A 1 179 LEU 179 292 292 LEU LEU A . n A 1 180 SER 180 293 293 SER SER A . n A 1 181 TYR 181 294 294 TYR TYR A . n A 1 182 LEU 182 295 295 LEU LEU A . n A 1 183 ASP 183 296 296 ASP ASP A . n A 1 184 SER 184 297 297 SER SER A . n A 1 185 LYS 185 298 298 LYS LYS A . n A 1 186 GLY 186 299 299 GLY GLY A . n A 1 187 ASN 187 300 ? ? ? A . n A 1 188 LYS 188 301 ? ? ? A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name 'NIAID, National Institute of Allergy and Infectious Diseases' _pdbx_SG_project.full_name_of_center 'Center for Structural Genomics of Infectious Diseases' _pdbx_SG_project.initial_of_center CSGID # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ZN 1 401 1 ZN ZN A . C 3 GOL 1 402 1 GOL GOL A . D 4 EPE 1 403 1 EPE EPE A . E 4 EPE 1 404 2 EPE EPE A . F 5 FMT 1 405 1 FMT FMT A . G 5 FMT 1 406 2 FMT FMT A . H 6 HOH 1 501 1 HOH HOH A . H 6 HOH 2 502 2 HOH HOH A . H 6 HOH 3 503 3 HOH HOH A . H 6 HOH 4 504 4 HOH HOH A . H 6 HOH 5 505 5 HOH HOH A . H 6 HOH 6 506 6 HOH HOH A . H 6 HOH 7 507 7 HOH HOH A . H 6 HOH 8 508 8 HOH HOH A . H 6 HOH 9 509 9 HOH HOH A . H 6 HOH 10 510 10 HOH HOH A . H 6 HOH 11 511 11 HOH HOH A . H 6 HOH 12 512 12 HOH HOH A . H 6 HOH 13 513 13 HOH HOH A . H 6 HOH 14 514 14 HOH HOH A . H 6 HOH 15 515 15 HOH HOH A . H 6 HOH 16 516 16 HOH HOH A . H 6 HOH 17 517 17 HOH HOH A . H 6 HOH 18 518 18 HOH HOH A . H 6 HOH 19 519 19 HOH HOH A . H 6 HOH 20 520 20 HOH HOH A . H 6 HOH 21 521 21 HOH HOH A . H 6 HOH 22 522 22 HOH HOH A . H 6 HOH 23 523 23 HOH HOH A . H 6 HOH 24 524 24 HOH HOH A . H 6 HOH 25 525 25 HOH HOH A . H 6 HOH 26 526 26 HOH HOH A . H 6 HOH 27 527 27 HOH HOH A . H 6 HOH 28 528 28 HOH HOH A . H 6 HOH 29 529 29 HOH HOH A . H 6 HOH 30 530 30 HOH HOH A . H 6 HOH 31 531 31 HOH HOH A . H 6 HOH 32 532 32 HOH HOH A . H 6 HOH 33 533 33 HOH HOH A . H 6 HOH 34 534 34 HOH HOH A . H 6 HOH 35 535 35 HOH HOH A . H 6 HOH 36 536 36 HOH HOH A . H 6 HOH 37 537 37 HOH HOH A . H 6 HOH 38 538 38 HOH HOH A . H 6 HOH 39 539 39 HOH HOH A . H 6 HOH 40 540 40 HOH HOH A . H 6 HOH 41 541 41 HOH HOH A . H 6 HOH 42 542 42 HOH HOH A . H 6 HOH 43 543 43 HOH HOH A . H 6 HOH 44 544 44 HOH HOH A . H 6 HOH 45 545 45 HOH HOH A . H 6 HOH 46 546 46 HOH HOH A . H 6 HOH 47 547 47 HOH HOH A . H 6 HOH 48 548 48 HOH HOH A . H 6 HOH 49 549 49 HOH HOH A . H 6 HOH 50 550 50 HOH HOH A . H 6 HOH 51 551 51 HOH HOH A . H 6 HOH 52 552 52 HOH HOH A . H 6 HOH 53 553 53 HOH HOH A . H 6 HOH 54 554 54 HOH HOH A . H 6 HOH 55 555 55 HOH HOH A . H 6 HOH 56 556 56 HOH HOH A . H 6 HOH 57 557 57 HOH HOH A . H 6 HOH 58 558 58 HOH HOH A . H 6 HOH 59 559 59 HOH HOH A . H 6 HOH 60 560 60 HOH HOH A . H 6 HOH 61 561 61 HOH HOH A . H 6 HOH 62 562 62 HOH HOH A . H 6 HOH 63 563 63 HOH HOH A . H 6 HOH 64 564 64 HOH HOH A . H 6 HOH 65 565 65 HOH HOH A . H 6 HOH 66 566 66 HOH HOH A . H 6 HOH 67 567 67 HOH HOH A . H 6 HOH 68 568 68 HOH HOH A . H 6 HOH 69 569 69 HOH HOH A . H 6 HOH 70 570 70 HOH HOH A . H 6 HOH 71 571 71 HOH HOH A . H 6 HOH 72 572 72 HOH HOH A . H 6 HOH 73 573 73 HOH HOH A . H 6 HOH 74 574 74 HOH HOH A . H 6 HOH 75 575 75 HOH HOH A . H 6 HOH 76 576 76 HOH HOH A . H 6 HOH 77 577 77 HOH HOH A . H 6 HOH 78 578 78 HOH HOH A . H 6 HOH 79 579 79 HOH HOH A . H 6 HOH 80 580 80 HOH HOH A . H 6 HOH 81 581 81 HOH HOH A . H 6 HOH 82 582 82 HOH HOH A . H 6 HOH 83 583 83 HOH HOH A . H 6 HOH 84 584 84 HOH HOH A . H 6 HOH 85 585 85 HOH HOH A . H 6 HOH 86 586 86 HOH HOH A . H 6 HOH 87 587 87 HOH HOH A . H 6 HOH 88 588 88 HOH HOH A . H 6 HOH 89 589 89 HOH HOH A . H 6 HOH 90 590 90 HOH HOH A . H 6 HOH 91 591 91 HOH HOH A . H 6 HOH 92 592 92 HOH HOH A . H 6 HOH 93 593 93 HOH HOH A . H 6 HOH 94 594 94 HOH HOH A . H 6 HOH 95 595 95 HOH HOH A . H 6 HOH 96 596 96 HOH HOH A . H 6 HOH 97 597 97 HOH HOH A . H 6 HOH 98 598 98 HOH HOH A . H 6 HOH 99 599 99 HOH HOH A . H 6 HOH 100 600 100 HOH HOH A . H 6 HOH 101 601 101 HOH HOH A . H 6 HOH 102 602 102 HOH HOH A . H 6 HOH 103 603 103 HOH HOH A . H 6 HOH 104 604 104 HOH HOH A . H 6 HOH 105 605 105 HOH HOH A . H 6 HOH 106 606 106 HOH HOH A . H 6 HOH 107 607 107 HOH HOH A . H 6 HOH 108 608 108 HOH HOH A . H 6 HOH 109 609 109 HOH HOH A . H 6 HOH 110 610 110 HOH HOH A . H 6 HOH 111 611 111 HOH HOH A . H 6 HOH 112 612 112 HOH HOH A . H 6 HOH 113 613 113 HOH HOH A . H 6 HOH 114 614 114 HOH HOH A . H 6 HOH 115 615 115 HOH HOH A . H 6 HOH 116 616 116 HOH HOH A . H 6 HOH 117 617 117 HOH HOH A . H 6 HOH 118 618 118 HOH HOH A . H 6 HOH 119 619 119 HOH HOH A . H 6 HOH 120 620 120 HOH HOH A . H 6 HOH 121 621 121 HOH HOH A . H 6 HOH 122 622 122 HOH HOH A . H 6 HOH 123 623 123 HOH HOH A . # _pdbx_struct_mod_residue.id 1 _pdbx_struct_mod_residue.label_asym_id A _pdbx_struct_mod_residue.label_comp_id MSE _pdbx_struct_mod_residue.label_seq_id 142 _pdbx_struct_mod_residue.auth_asym_id A _pdbx_struct_mod_residue.auth_comp_id MSE _pdbx_struct_mod_residue.auth_seq_id 255 _pdbx_struct_mod_residue.PDB_ins_code ? _pdbx_struct_mod_residue.parent_comp_id MET _pdbx_struct_mod_residue.details SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 ND1 ? A HIS 82 ? A HIS 195 ? 1_555 ZN ? B ZN . ? A ZN 401 ? 1_555 NE2 ? A HIS 12 ? A HIS 125 ? 1_555 97.5 ? 2 ND1 ? A HIS 82 ? A HIS 195 ? 1_555 ZN ? B ZN . ? A ZN 401 ? 1_555 OE2 ? A GLU 28 ? A GLU 141 ? 1_555 99.1 ? 3 NE2 ? A HIS 12 ? A HIS 125 ? 1_555 ZN ? B ZN . ? A ZN 401 ? 1_555 OE2 ? A GLU 28 ? A GLU 141 ? 1_555 92.0 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2014-11-05 2 'Structure model' 1 1 2017-11-22 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # _pdbx_audit_revision_group.ordinal 1 _pdbx_audit_revision_group.revision_ordinal 2 _pdbx_audit_revision_group.data_content_type 'Structure model' _pdbx_audit_revision_group.group 'Refinement description' # _pdbx_audit_revision_category.ordinal 1 _pdbx_audit_revision_category.revision_ordinal 2 _pdbx_audit_revision_category.data_content_type 'Structure model' _pdbx_audit_revision_category.category software # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] 'X-RAY DIFFRACTION' 1 ? refined -27.3530 15.6623 -17.1819 0.3072 0.2358 0.2491 -0.0617 -0.0065 0.0344 8.8507 7.2895 2.7052 3.3388 -3.7746 -3.9995 0.3188 0.8530 0.3433 -0.4618 0.3244 0.0563 0.6311 -0.6947 -0.6424 'X-RAY DIFFRACTION' 2 ? refined -26.1293 6.5523 -0.0284 0.3681 0.2271 0.3267 -0.1270 -0.0265 0.0279 3.8750 5.6958 0.4512 -0.4133 0.7725 1.2062 0.0807 -0.4889 -0.1633 0.8210 -0.0114 -0.3812 0.0924 0.2336 0.0207 'X-RAY DIFFRACTION' 3 ? refined -35.7090 9.7308 -6.9408 0.2482 0.2148 0.2339 -0.0773 0.0134 -0.0093 2.7593 5.3802 2.9316 1.3050 -0.2038 -1.5370 -0.0304 0.1630 0.0888 -0.0531 0.0850 0.3515 -0.0283 -0.2306 -0.0414 'X-RAY DIFFRACTION' 4 ? refined -30.6106 2.5820 -15.6479 0.5391 0.3762 0.4008 -0.1291 0.0519 -0.0215 2.8937 3.2210 7.6130 -2.8747 2.9507 -3.7733 -0.0334 0.3861 -0.1660 -1.0166 -0.0761 -0.2224 0.4262 -0.1422 0.0595 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 'X-RAY DIFFRACTION' 1 1 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid 114 through 123 ) ; 'X-RAY DIFFRACTION' 2 2 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid 124 through 158 ) ; 'X-RAY DIFFRACTION' 3 3 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid 159 through 276 ) ; 'X-RAY DIFFRACTION' 4 4 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid 277 through 299 ) ; # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal SBC-Collect 'data collection' . ? 1 SHELXD phasing Builder/HKL3000 ? 2 MLPHARE phasing Builder/HKL3000 ? 3 DM 'model building' Builder/HKL3000 ? 4 DENZO 'data reduction' Builder/HKL3000 ? 5 SCALEPACK 'data scaling' Builder/HKL3000 ? 6 PHENIX refinement '(phenix.refine: 1.8.2_1309)' ? 7 HKL-3000 'data reduction' . ? 8 HKL-3000 'data scaling' . ? 9 DM phasing Builder/HKL3000 ? 10 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASN A 115 ? ? -150.29 35.59 2 1 HIS A 125 ? ? 64.96 -166.26 3 1 ASN A 203 ? ? -145.57 29.95 4 1 CYS A 262 ? ? -85.72 36.42 5 1 LYS A 298 ? ? -146.55 54.22 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LYS 130 ? CE ? A LYS 17 CE 2 1 Y 1 A LYS 130 ? NZ ? A LYS 17 NZ 3 1 Y 1 A GLU 133 ? CD ? A GLU 20 CD 4 1 Y 1 A GLU 133 ? OE1 ? A GLU 20 OE1 5 1 Y 1 A GLU 133 ? OE2 ? A GLU 20 OE2 6 1 Y 1 A LYS 135 ? NZ ? A LYS 22 NZ 7 1 Y 1 A LYS 158 ? CE ? A LYS 45 CE 8 1 Y 1 A LYS 158 ? NZ ? A LYS 45 NZ 9 1 Y 1 A LYS 160 ? CD ? A LYS 47 CD 10 1 Y 1 A LYS 160 ? CE ? A LYS 47 CE 11 1 Y 1 A LYS 160 ? NZ ? A LYS 47 NZ 12 1 Y 1 A ASP 170 ? OD1 ? A ASP 57 OD1 13 1 Y 1 A ASP 170 ? OD2 ? A ASP 57 OD2 14 1 Y 1 A LYS 200 ? CD ? A LYS 87 CD 15 1 Y 1 A LYS 200 ? CE ? A LYS 87 CE 16 1 Y 1 A LYS 200 ? NZ ? A LYS 87 NZ 17 1 Y 1 A LYS 236 ? CE ? A LYS 123 CE 18 1 Y 1 A LYS 236 ? NZ ? A LYS 123 NZ 19 1 Y 1 A LYS 298 ? CE ? A LYS 185 CE 20 1 Y 1 A LYS 298 ? NZ ? A LYS 185 NZ 21 1 N 1 A EPE 403 ? C3 ? D EPE 1 C3 22 1 N 1 A EPE 403 ? N4 ? D EPE 1 N4 23 1 N 1 A EPE 403 ? C5 ? D EPE 1 C5 24 1 N 1 A EPE 403 ? C7 ? D EPE 1 C7 25 1 N 1 A EPE 403 ? C8 ? D EPE 1 C8 26 1 N 1 A EPE 403 ? O8 ? D EPE 1 O8 27 1 N 1 A EPE 404 ? C2 ? E EPE 1 C2 28 1 N 1 A EPE 404 ? C3 ? E EPE 1 C3 29 1 N 1 A EPE 404 ? N4 ? E EPE 1 N4 30 1 N 1 A EPE 404 ? C5 ? E EPE 1 C5 31 1 N 1 A EPE 404 ? C6 ? E EPE 1 C6 32 1 N 1 A EPE 404 ? C7 ? E EPE 1 C7 33 1 N 1 A EPE 404 ? C8 ? E EPE 1 C8 34 1 N 1 A EPE 404 ? O8 ? E EPE 1 O8 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A ASN 300 ? A ASN 187 2 1 Y 1 A LYS 301 ? A LYS 188 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'ZINC ION' ZN 3 GLYCEROL GOL 4 '4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID' EPE 5 'FORMIC ACID' FMT 6 water HOH #