HEADER CELL INVASION 18-NOV-14 4RU3 TITLE CRYSTAL STRUCTURE OF THE CELL PUNCTURING PROTEIN ORF41 FROM TITLE 2 PSEUDOMONAS PHAGE SN COMPND MOL_ID: 1; COMPND 2 MOLECULE: PUNCTURING PROTEIN GP41; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: PUTATIVE BASEPLATE PROTEIN; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PSEUDOMONAS PHAGE SN; SOURCE 3 ORGANISM_TAXID: 582382; SOURCE 4 GENE: ORF41; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: B834/DE3; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PEE3, PET-23 DERIVATIVE (TEV CLEAVAGE SOURCE 10 SITE AFTER HIS-TAG) KEYWDS GP41, MEMBRANE TRANSLOCATION, PHAGE BASEPLATE, CELL PUNCTURING KEYWDS 2 DEVICE, CELL INVASION EXPDTA X-RAY DIFFRACTION AUTHOR C.BROWNING,M.M.SHNEIDER,P.G.LEIMAN REVDAT 4 28-FEB-24 4RU3 1 REMARK SEQADV REVDAT 3 25-SEP-19 4RU3 1 TITLE JRNL REVDAT 2 22-NOV-17 4RU3 1 REMARK REVDAT 1 18-NOV-15 4RU3 0 JRNL AUTH C.BROWNING,M.M.SHNEIDER,P.G.LEIMAN JRNL TITL CRYSTAL STRUCTURE OF THE CELL PUNCTURING PROTEIN ORF41 FROM JRNL TITL 2 PSEUDOMONAS PHAGE SN JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.17 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.8.2_1309) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.17 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 34.51 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.080 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 67339 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.135 REMARK 3 R VALUE (WORKING SET) : 0.134 REMARK 3 FREE R VALUE : 0.150 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 2.980 REMARK 3 FREE R VALUE TEST SET COUNT : 2009 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 34.5283 - 2.8243 1.00 4872 152 0.1615 0.1641 REMARK 3 2 2.8243 - 2.2418 1.00 4764 146 0.1581 0.1757 REMARK 3 3 2.2418 - 1.9585 1.00 4686 148 0.1284 0.1377 REMARK 3 4 1.9585 - 1.7794 1.00 4687 144 0.1199 0.1451 REMARK 3 5 1.7794 - 1.6519 1.00 4695 146 0.1119 0.1233 REMARK 3 6 1.6519 - 1.5545 1.00 4658 139 0.1026 0.1196 REMARK 3 7 1.5545 - 1.4766 1.00 4639 142 0.0950 0.1234 REMARK 3 8 1.4766 - 1.4124 1.00 4667 145 0.0972 0.1234 REMARK 3 9 1.4124 - 1.3580 1.00 4641 143 0.1021 0.1252 REMARK 3 10 1.3580 - 1.3111 1.00 4641 142 0.1047 0.1436 REMARK 3 11 1.3111 - 1.2701 0.99 4628 137 0.1141 0.1622 REMARK 3 12 1.2701 - 1.2338 0.99 4606 143 0.1149 0.1456 REMARK 3 13 1.2338 - 1.2013 0.99 4587 143 0.1167 0.1367 REMARK 3 14 1.2013 - 1.1720 0.99 4559 139 0.1244 0.1524 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.070 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 11.310 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.013 1806 REMARK 3 ANGLE : 1.585 2485 REMARK 3 CHIRALITY : 0.106 276 REMARK 3 PLANARITY : 0.009 340 REMARK 3 DIHEDRAL : 14.397 680 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4RU3 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 20-NOV-14. REMARK 100 THE DEPOSITION ID IS D_1000087797. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 05-SEP-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : SI(111) MONOCHROMATOR REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 67579 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.170 REMARK 200 RESOLUTION RANGE LOW (A) : 34.513 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 17.70 REMARK 200 R MERGE (I) : 0.06800 REMARK 200 R SYM (I) : 0.07100 REMARK 200 FOR THE DATA SET : 23.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.17 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.24 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 17.80 REMARK 200 R MERGE FOR SHELL (I) : 0.29300 REMARK 200 R SYM FOR SHELL (I) : 0.30900 REMARK 200 FOR SHELL : 8.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 41.16 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.09 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 21% PEG 10K, 0.1M AMMONIUM ACETATE, REMARK 280 0.1M BIS-TRIS PH 5.0, VAPOR DIFFUSION, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 3 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 5555 Z,X,Y REMARK 290 6555 Z+1/2,-X+1/2,-Y REMARK 290 7555 -Z+1/2,-X,Y+1/2 REMARK 290 8555 -Z,X+1/2,-Y+1/2 REMARK 290 9555 Y,Z,X REMARK 290 10555 -Y,Z+1/2,-X+1/2 REMARK 290 11555 Y+1/2,-Z+1/2,-X REMARK 290 12555 -Y+1/2,-Z,X+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 42.27000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 42.27000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 42.27000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 42.27000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 42.27000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 42.27000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 6 0.000000 0.000000 1.000000 42.27000 REMARK 290 SMTRY2 6 -1.000000 0.000000 0.000000 42.27000 REMARK 290 SMTRY3 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 0.000000 -1.000000 42.27000 REMARK 290 SMTRY2 7 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 1.000000 0.000000 42.27000 REMARK 290 SMTRY1 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 8 1.000000 0.000000 0.000000 42.27000 REMARK 290 SMTRY3 8 0.000000 -1.000000 0.000000 42.27000 REMARK 290 SMTRY1 9 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 9 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 9 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 10 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 10 0.000000 0.000000 1.000000 42.27000 REMARK 290 SMTRY3 10 -1.000000 0.000000 0.000000 42.27000 REMARK 290 SMTRY1 11 0.000000 1.000000 0.000000 42.27000 REMARK 290 SMTRY2 11 0.000000 0.000000 -1.000000 42.27000 REMARK 290 SMTRY3 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 12 0.000000 -1.000000 0.000000 42.27000 REMARK 290 SMTRY2 12 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 12 1.000000 0.000000 0.000000 42.27000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 25660 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 22860 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -177.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT2 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT1 3 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 3 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT3 3 1.000000 0.000000 0.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 FE FE A 301 LIES ON A SPECIAL POSITION. REMARK 375 CA CA A 302 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 1 REMARK 465 SER A 2 REMARK 465 ASN A 3 REMARK 465 ILE A 4 REMARK 465 SER A 5 REMARK 465 LEU A 6 REMARK 465 THR A 7 REMARK 465 SER A 8 REMARK 465 ALA A 9 REMARK 465 LYS A 10 REMARK 465 ALA A 11 REMARK 465 PRO A 12 REMARK 465 ASP A 13 REMARK 465 ARG A 14 REMARK 465 THR A 15 REMARK 465 ARG A 16 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 ILE A 150 N CA C O CB CG1 CG2 REMARK 480 ILE A 150 CD1 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NZ LYS A 167 O HOH A 574 1.89 REMARK 500 O HOH A 478 O HOH A 697 1.95 REMARK 500 OE1 GLN A 42 O HOH A 471 1.98 REMARK 500 O HOH A 666 O HOH A 694 2.01 REMARK 500 O HOH A 436 O HOH A 682 2.11 REMARK 500 O HOH A 709 O HOH A 710 2.12 REMARK 500 O HOH A 643 O HOH A 677 2.16 REMARK 500 O HOH A 553 O HOH A 558 2.17 REMARK 500 O HOH A 430 O HOH A 699 2.18 REMARK 500 O HOH A 621 O HOH A 698 2.18 REMARK 500 ND2 ASN A 118 O HOH A 703 2.18 REMARK 500 O HOH A 497 O HOH A 636 2.18 REMARK 500 NH1 ARG A 137 O HOH A 648 2.19 REMARK 500 O HOH A 682 O HOH A 705 2.19 REMARK 500 O HOH A 670 O HOH A 681 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 504 O HOH A 666 9555 2.10 REMARK 500 O HOH A 491 O HOH A 626 10554 2.15 REMARK 500 O HOH A 449 O HOH A 665 12454 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 VAL A 34 -63.98 -132.47 REMARK 500 PHE A 135 -126.79 59.58 REMARK 500 SER A 172 -62.26 -97.90 REMARK 500 ASN A 191 -112.83 -113.69 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 FE A 301 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 203 NE2 REMARK 620 2 HIS A 205 NE2 90.9 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 302 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 207 OE1 REMARK 620 2 ASN A 209 O 81.4 REMARK 620 N 1 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FE A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 303 DBREF 4RU3 A 2 221 UNP B7VFI6 B7VFI6_9CAUD 2 221 SEQADV 4RU3 GLY A 1 UNP B7VFI6 EXPRESSION TAG SEQRES 1 A 221 GLY SER ASN ILE SER LEU THR SER ALA LYS ALA PRO ASP SEQRES 2 A 221 ARG THR ARG LEU ILE ALA ALA LEU ASP ALA ARG SER ARG SEQRES 3 A 221 ARG ASP ALA LEU ASP PHE GLU VAL MET ILE PRO ALA GLN SEQRES 4 A 221 VAL VAL GLN TYR ASP ARG ALA GLU ASN ILE ALA THR ILE SEQRES 5 A 221 GLN PRO LEU ILE THR TRP VAL ASP THR GLU HIS ASN ALA SEQRES 6 A 221 VAL GLN ARG HIS GLN LEU VAL ASP ILE PRO VAL ILE SER SEQRES 7 A 221 MET GLY ALA GLY GLY PHE HIS ILE SER PHE PRO ILE GLN SEQRES 8 A 221 GLN GLY ASP ILE GLY TRP ILE TYR ALA ALA ASP ARG ASP SEQRES 9 A 221 THR SER GLN PHE LEU GLU SER LEU SER MET SER LYS PRO SEQRES 10 A 221 ASN THR GLY ARG ILE HIS LYS PHE GLU HIS GLY LEU PHE SEQRES 11 A 221 ILE PRO ASP VAL PHE ARG ARG TYR THR ILE ASN SER GLU SEQRES 12 A 221 ASP SER ALA ALA MET VAL ILE GLN SER THR SER GLY ALA SEQRES 13 A 221 THR ARG ILE SER ILE ARG GLY ASP ASN ILE LYS ILE THR SEQRES 14 A 221 ALA PRO SER ASN VAL THR VAL ASP THR PRO GLN ALA ASN SEQRES 15 A 221 PHE THR GLY SER VAL THR ILE ALA ASN THR LEU VAL VAL SEQRES 16 A 221 ASN GLY VAL ASN VAL ASN ASN HIS GLY HIS LEU GLU ASN SEQRES 17 A 221 ASN PRO PRO ASP ALA ARG THR LYS GLY GLY MET ILE ALA HET FE A 301 1 HET CA A 302 1 HET GOL A 303 6 HETNAM FE FE (III) ION HETNAM CA CALCIUM ION HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 FE FE 3+ FORMUL 3 CA CA 2+ FORMUL 4 GOL C3 H8 O3 FORMUL 5 HOH *310(H2 O) HELIX 1 1 ILE A 18 PHE A 32 1 15 HELIX 2 2 THR A 105 LEU A 112 1 8 HELIX 3 3 ASN A 141 SER A 145 5 5 SHEET 1 A 5 LEU A 71 PRO A 75 0 SHEET 2 A 5 ILE A 49 PRO A 54 -1 N ILE A 52 O LEU A 71 SHEET 3 A 5 MET A 35 ASP A 44 -1 N VAL A 41 O THR A 51 SHEET 4 A 5 ILE A 95 ALA A 101 -1 O ILE A 98 N ILE A 36 SHEET 5 A 5 LYS A 124 PRO A 132 -1 O ILE A 131 N TRP A 97 SHEET 1 B 2 TRP A 58 VAL A 59 0 SHEET 2 B 2 ALA A 65 VAL A 66 -1 O VAL A 66 N TRP A 58 SHEET 1 C 2 GLY A 80 ALA A 81 0 SHEET 2 C 2 PHE A 84 HIS A 85 -1 O PHE A 84 N ALA A 81 SHEET 1 D 3 MET A 148 GLN A 151 0 SHEET 2 D 3 ARG A 158 ILE A 161 -1 O ILE A 161 N MET A 148 SHEET 3 D 3 ILE A 166 THR A 169 -1 O LYS A 167 N SER A 160 SHEET 1 E 2 VAL A 194 VAL A 195 0 SHEET 2 E 2 VAL A 198 ASN A 199 -1 O VAL A 198 N VAL A 195 LINK NE2 HIS A 203 FE FE A 301 1555 1555 2.13 LINK NE2 HIS A 205 FE FE A 301 1555 1555 2.18 LINK OE1 GLU A 207 CA CA A 302 1555 1555 2.27 LINK O ASN A 209 CA CA A 302 1555 1555 2.31 CISPEP 1 ASN A 209 PRO A 210 0 2.75 SITE 1 AC1 2 HIS A 203 HIS A 205 SITE 1 AC2 2 GLU A 207 ASN A 209 SITE 1 AC3 8 GLN A 42 TYR A 43 ASP A 44 ILE A 49 SITE 2 AC3 8 ALA A 50 THR A 51 ASP A 73 HOH A 540 CRYST1 84.540 84.540 84.540 90.00 90.00 90.00 P 21 3 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011829 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011829 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011829 0.00000