HEADER TRANSCRIPTION 27-NOV-14 4RVR TITLE CRYSTAL STRUCTURE OF THE BROMODOMAIN OF HUMAN BAZ2B IN COMPLEX WITH TITLE 2 GSK2801 COMPND MOL_ID: 1; COMPND 2 MOLECULE: BROMODOMAIN ADJACENT TO ZINC FINGER DOMAIN PROTEIN 2B; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: BROMO DOMAIN RESIDUES 2054-2168; COMPND 5 SYNONYM: HWALP4; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: BAZ2B, KIAA1476; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)-R3; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PNIC28-BSA4 KEYWDS SGC, STRUCTURAL GENOMICS CONSORTIUM, TRANSCRIPTION, ACETYLATED LYSINE KEYWDS 2 BINDING PROTEIN, KIAA1476, WALP4, CHEMICAL PROBE EXPDTA X-RAY DIFFRACTION AUTHOR A.CHAIKUAD,I.FELLETAR,C.W.CHUNG,D.DREWRY,P.CHEN,P.FILIPPAKOPOULOS, AUTHOR 2 O.FEDOROV,F.VON DELFT,C.H.ARROWSMITH,A.M.EDWARDS,C.BOUNTRA,S.KNAPP, AUTHOR 3 STRUCTURAL GENOMICS CONSORTIUM (SGC) REVDAT 6 20-SEP-23 4RVR 1 REMARK SEQADV REVDAT 5 16-MAR-16 4RVR 1 JRNL REVDAT 4 02-SEP-15 4RVR 1 JRNL REVDAT 3 22-APR-15 4RVR 1 JRNL REVDAT 2 15-APR-15 4RVR 1 JRNL REVDAT 1 10-DEC-14 4RVR 0 JRNL AUTH P.CHEN,A.CHAIKUAD,P.BAMBOROUGH,M.BANTSCHEFF,C.BOUNTRA, JRNL AUTH 2 C.W.CHUNG,O.FEDOROV,P.GRANDI,D.JUNG,R.LESNIAK,M.LINDON, JRNL AUTH 3 S.MULLER,M.PHILPOTT,R.PRINJHA,C.ROGERS,C.SELENSKI,C.TALLANT, JRNL AUTH 4 T.WERNER,T.M.WILLSON,S.KNAPP,D.H.DREWRY JRNL TITL DISCOVERY AND CHARACTERIZATION OF GSK2801, A SELECTIVE JRNL TITL 2 CHEMICAL PROBE FOR THE BROMODOMAINS BAZ2A AND BAZ2B. JRNL REF J.MED.CHEM. V. 59 1410 2016 JRNL REFN ISSN 0022-2623 JRNL PMID 25799074 JRNL DOI 10.1021/ACS.JMEDCHEM.5B00209 REMARK 2 REMARK 2 RESOLUTION. 1.98 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.7.0032 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.98 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.11 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 15770 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.189 REMARK 3 R VALUE (WORKING SET) : 0.187 REMARK 3 FREE R VALUE : 0.232 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 841 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.98 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.03 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1111 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 97.92 REMARK 3 BIN R VALUE (WORKING SET) : 0.3800 REMARK 3 BIN FREE R VALUE SET COUNT : 64 REMARK 3 BIN FREE R VALUE : 0.5350 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 948 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 50 REMARK 3 SOLVENT ATOMS : 176 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 39.70 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 44.68 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.21000 REMARK 3 B22 (A**2) : 0.08000 REMARK 3 B33 (A**2) : -1.29000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.125 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.129 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.085 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 5.344 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.960 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.947 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1044 ; 0.016 ; 0.020 REMARK 3 BOND LENGTHS OTHERS (A): 1001 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 1401 ; 1.505 ; 2.019 REMARK 3 BOND ANGLES OTHERS (DEGREES): 2323 ; 0.741 ; 3.006 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 124 ; 6.063 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 45 ;32.634 ;24.667 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 192 ;13.474 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 5 ;16.825 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 147 ; 0.083 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1127 ; 0.009 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 222 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 478 ; 6.122 ; 5.808 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 477 ; 6.051 ; 5.791 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 599 ; 7.972 ;10.779 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 600 ; 7.967 ;10.814 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 566 ; 7.990 ; 7.143 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 566 ; 7.985 ; 7.142 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 800 ;10.503 ;12.393 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 1387 ;12.494 ;35.696 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 1388 ;12.491 ;35.741 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1856 A 1863 REMARK 3 ORIGIN FOR THE GROUP (A): 33.6692 15.7387 11.5060 REMARK 3 T TENSOR REMARK 3 T11: 0.1216 T22: 0.2471 REMARK 3 T33: 0.0192 T12: 0.1105 REMARK 3 T13: -0.0317 T23: -0.0527 REMARK 3 L TENSOR REMARK 3 L11: 8.4381 L22: 1.5696 REMARK 3 L33: 2.5018 L12: 1.0174 REMARK 3 L13: -4.0691 L23: 0.3910 REMARK 3 S TENSOR REMARK 3 S11: -0.2422 S12: 0.3997 S13: -0.2341 REMARK 3 S21: 0.1792 S22: 0.1871 S23: -0.1064 REMARK 3 S31: 0.2216 S32: -0.1146 S33: 0.0552 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1864 A 1951 REMARK 3 ORIGIN FOR THE GROUP (A): 61.8894 30.7600 3.1771 REMARK 3 T TENSOR REMARK 3 T11: 0.1031 T22: 0.0779 REMARK 3 T33: 0.0303 T12: -0.0105 REMARK 3 T13: 0.0046 T23: 0.0074 REMARK 3 L TENSOR REMARK 3 L11: 1.3452 L22: 1.5314 REMARK 3 L33: 0.6525 L12: 0.9337 REMARK 3 L13: -0.1578 L23: -0.5271 REMARK 3 S TENSOR REMARK 3 S11: 0.0552 S12: 0.0229 S13: -0.0167 REMARK 3 S21: 0.0682 S22: -0.0178 S23: 0.0180 REMARK 3 S31: -0.1217 S32: -0.0251 S33: -0.0374 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1952 A 1972 REMARK 3 ORIGIN FOR THE GROUP (A): 57.7479 24.7288 -6.9661 REMARK 3 T TENSOR REMARK 3 T11: 0.1533 T22: 0.1691 REMARK 3 T33: 0.0384 T12: -0.0279 REMARK 3 T13: -0.0326 T23: -0.0067 REMARK 3 L TENSOR REMARK 3 L11: 2.5302 L22: 7.4033 REMARK 3 L33: 7.3136 L12: -0.7399 REMARK 3 L13: -1.4152 L23: -4.1188 REMARK 3 S TENSOR REMARK 3 S11: -0.2953 S12: 0.3609 S13: -0.0706 REMARK 3 S21: -0.5505 S22: 0.3471 S23: 0.4017 REMARK 3 S31: 0.6128 S32: -0.3485 S33: -0.0517 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 4RVR COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 28-NOV-14. REMARK 100 THE DEPOSITION ID IS D_1000087855. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 29-MAR-12 REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU FR-E SUPERBRIGHT REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : FLAT GRAPHITE CRYSTAL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS IV REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 16611 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.980 REMARK 200 RESOLUTION RANGE LOW (A) : 31.430 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 5.000 REMARK 200 R MERGE (I) : 0.06200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 13.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.98 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.09 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 5.00 REMARK 200 R MERGE FOR SHELL (I) : 0.64700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 3G0L REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 71.23 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.27 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 28% LOW MOLECULAR-WEIGHT PEG SMEARS, REMARK 280 0.1M MES PH 6.5 (LIGAND SOAKING PERFORMED IN LOW-MOLECULAR- REMARK 280 WEIGHT PEG SMEARS STABILIZING SOLUTION) , VAPOR DIFFUSION, REMARK 280 SITTING DROP, TEMPERATURE 277.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 29.03000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 29.03000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 41.36000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 48.48750 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 41.36000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 48.48750 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 29.03000 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 41.36000 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 48.48750 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 29.03000 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 41.36000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 48.48750 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE AUTHOR STATES THAT THE BIOLOGICAL UNIT OF THIS PROTEIN REMARK 300 IS UNKNOWN. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A1970 CG CD CE NZ REMARK 470 VAL A1971 CG1 CG2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 VAL A1971 49.56 -87.60 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 3WQ A 2001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 2002 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 2003 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 2004 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 2005 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 2006 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 2007 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4IR3 RELATED DB: PDB REMARK 900 RELATED ID: 4IR4 RELATED DB: PDB REMARK 900 RELATED ID: 4IR5 RELATED DB: PDB REMARK 900 RELATED ID: 4IR6 RELATED DB: PDB DBREF 4RVR A 1858 1972 UNP Q9UIF8 BAZ2B_HUMAN 2054 2168 SEQADV 4RVR SER A 1856 UNP Q9UIF8 EXPRESSION TAG SEQADV 4RVR MET A 1857 UNP Q9UIF8 EXPRESSION TAG SEQRES 1 A 117 SER MET SER VAL LYS LYS PRO LYS ARG ASP ASP SER LYS SEQRES 2 A 117 ASP LEU ALA LEU CYS SER MET ILE LEU THR GLU MET GLU SEQRES 3 A 117 THR HIS GLU ASP ALA TRP PRO PHE LEU LEU PRO VAL ASN SEQRES 4 A 117 LEU LYS LEU VAL PRO GLY TYR LYS LYS VAL ILE LYS LYS SEQRES 5 A 117 PRO MET ASP PHE SER THR ILE ARG GLU LYS LEU SER SER SEQRES 6 A 117 GLY GLN TYR PRO ASN LEU GLU THR PHE ALA LEU ASP VAL SEQRES 7 A 117 ARG LEU VAL PHE ASP ASN CYS GLU THR PHE ASN GLU ASP SEQRES 8 A 117 ASP SER ASP ILE GLY ARG ALA GLY HIS ASN MET ARG LYS SEQRES 9 A 117 TYR PHE GLU LYS LYS TRP THR ASP THR PHE LYS VAL SER HET 3WQ A2001 26 HET EDO A2002 4 HET EDO A2003 4 HET EDO A2004 4 HET EDO A2005 8 HET EDO A2006 4 HET EDO A2007 4 HETNAM 3WQ 1-{1-[2-(METHYLSULFONYL)PHENYL]-7-PROPOXYINDOLIZIN-3- HETNAM 2 3WQ YL}ETHANONE HETNAM EDO 1,2-ETHANEDIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 2 3WQ C20 H21 N O4 S FORMUL 3 EDO 6(C2 H6 O2) FORMUL 9 HOH *176(H2 O) HELIX 1 1 LYS A 1868 HIS A 1883 1 16 HELIX 2 2 GLU A 1884 LEU A 1890 5 7 HELIX 3 3 GLY A 1900 ILE A 1905 1 6 HELIX 4 4 ASP A 1910 SER A 1920 1 11 HELIX 5 5 ASN A 1925 ASN A 1944 1 20 HELIX 6 6 SER A 1948 LYS A 1970 1 23 SITE 1 AC1 11 PRO A1888 LEU A1891 PRO A1892 VAL A1893 SITE 2 AC1 11 ASN A1894 LEU A1897 VAL A1898 ASN A1944 SITE 3 AC1 11 ILE A1950 HOH A2170 HOH A2204 SITE 1 AC2 2 HIS A1883 GLU A1884 SITE 1 AC3 4 ARG A1864 THR A1968 PHE A1969 SER A1972 SITE 1 AC4 1 ARG A1864 SITE 1 AC5 4 THR A1878 GLU A1881 ARG A1915 HOH A2228 SITE 1 AC6 6 LEU A1895 LYS A1896 VAL A1898 PRO A1899 SITE 2 AC6 6 HOH A2102 HOH A2268 SITE 1 AC7 1 SER A1972 CRYST1 82.720 96.975 58.060 90.00 90.00 90.00 C 2 2 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012089 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010312 0.000000 0.00000 SCALE3 0.000000 0.000000 0.017224 0.00000