HEADER FLUORESCENT PROTEIN 17-DEC-14 4RYW TITLE CRYSTAL STRUCTURE OF THE PHOTOCONVERTED GREEN FLUORESCENT PROTEIN TITLE 2 NOWGFP_CONV (THE VARIANT OF CYAN CERULEAN) AT PH 7.0 COMPND MOL_ID: 1; COMPND 2 MOLECULE: NOWGFP_CONV; COMPND 3 CHAIN: A, B, C; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 3 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS FLUORESCENT PROTEIN, PHOTOCONVERTED NOWGFP, TWG CHROMOPHORE, BETA- KEYWDS 2 BARREL, VARIANT OF CYAN CERULEAN EXPDTA X-RAY DIFFRACTION AUTHOR V.Z.PLETNEV,N.V.PLETNEVA,S.V.PLETNEV REVDAT 3 06-DEC-23 4RYW 1 REMARK REVDAT 2 20-SEP-23 4RYW 1 REMARK LINK REVDAT 1 02-SEP-15 4RYW 0 JRNL AUTH V.Z.PLETNEV,N.V.PLETNEVA,K.S.SARKISYAN,A.S.MISHIN, JRNL AUTH 2 K.A.LUKYANOV,E.A.GORYACHEVA,R.H.ZIGANSHIN,Z.DAUTER,S.PLETNEV JRNL TITL STRUCTURE OF THE GREEN FLUORESCENT PROTEIN NOWGFP WITH AN JRNL TITL 2 ANIONIC TRYPTOPHAN-BASED CHROMOPHORE. JRNL REF ACTA CRYSTALLOGR.,SECT.D V. 71 1699 2015 JRNL REFN ISSN 0907-4449 JRNL PMID 26249350 JRNL DOI 10.1107/S1399004715010159 REMARK 2 REMARK 2 RESOLUTION. 2.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.1.24 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.7 REMARK 3 NUMBER OF REFLECTIONS : 21817 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.210 REMARK 3 R VALUE (WORKING SET) : 0.205 REMARK 3 FREE R VALUE : 0.295 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1182 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.50 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.56 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1440 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 86.91 REMARK 3 BIN R VALUE (WORKING SET) : 0.2580 REMARK 3 BIN FREE R VALUE SET COUNT : 60 REMARK 3 BIN FREE R VALUE : 0.3820 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5427 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 54 REMARK 3 SOLVENT ATOMS : 164 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 37.68 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.13000 REMARK 3 B22 (A**2) : 0.03000 REMARK 3 B33 (A**2) : -0.04000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.14000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.384 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.297 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 13.060 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.922 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.841 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 5610 ; 0.012 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 5292 ; 0.003 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 7562 ; 1.509 ; 1.982 REMARK 3 BOND ANGLES OTHERS (DEGREES): 12250 ; 0.765 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 679 ; 7.508 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 259 ;36.479 ;25.251 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 966 ;17.328 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 18 ;15.225 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 815 ; 0.080 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 6277 ; 0.006 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 1245 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2728 ; 2.318 ; 3.618 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 2727 ; 2.318 ; 3.616 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3398 ; 3.618 ; 5.419 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : REFINED INDIVIDUALLY REMARK 4 REMARK 4 4RYW COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 02-JAN-15. REMARK 100 THE DEPOSITION ID IS D_1000087967. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 2014 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 22-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : MIRROR REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 23175 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.500 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 3.700 REMARK 200 R MERGE (I) : 0.11700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 6.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.59 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 3.60 REMARK 200 R MERGE FOR SHELL (I) : 0.50200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: PDB ENTRY 2WSO REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 39.37 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.03 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M NA ACETATE PH=4.5, 30% (V/V) PEG REMARK 280 5000 MONO METHYL ETHER, PH 7.0, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 293.0K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 49.01050 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THREE MOLECULES IN THE ASSYMETRIC UNIT REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -11 REMARK 465 ARG A -10 REMARK 465 GLY A -9 REMARK 465 SER A -8 REMARK 465 HIS A -7 REMARK 465 HIS A -6 REMARK 465 HIS A -5 REMARK 465 HIS A -4 REMARK 465 HIS A -3 REMARK 465 HIS A -2 REMARK 465 GLY A -1 REMARK 465 SER A 0 REMARK 465 VAL A 1 REMARK 465 GLY A 232 REMARK 465 ALA A 233 REMARK 465 ASP A 234 REMARK 465 GLU A 235 REMARK 465 LEU A 236 REMARK 465 SEC A 237 REMARK 465 LYS A 238 REMARK 465 MET B -11 REMARK 465 ARG B -10 REMARK 465 GLY B -9 REMARK 465 SER B -8 REMARK 465 HIS B -7 REMARK 465 HIS B -6 REMARK 465 HIS B -5 REMARK 465 HIS B -4 REMARK 465 HIS B -3 REMARK 465 HIS B -2 REMARK 465 GLY B -1 REMARK 465 SER B 0 REMARK 465 VAL B 1 REMARK 465 GLY B 232 REMARK 465 ALA B 233 REMARK 465 ASP B 234 REMARK 465 GLU B 235 REMARK 465 LEU B 236 REMARK 465 SEC B 237 REMARK 465 LYS B 238 REMARK 465 MET C -11 REMARK 465 ARG C -10 REMARK 465 GLY C -9 REMARK 465 SER C -8 REMARK 465 HIS C -7 REMARK 465 HIS C -6 REMARK 465 HIS C -5 REMARK 465 HIS C -4 REMARK 465 HIS C -3 REMARK 465 HIS C -2 REMARK 465 GLY C -1 REMARK 465 SER C 0 REMARK 465 VAL C 1 REMARK 465 GLY C 232 REMARK 465 ALA C 233 REMARK 465 ASP C 234 REMARK 465 GLU C 235 REMARK 465 LEU C 236 REMARK 465 SEC C 237 REMARK 465 LYS C 238 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 21 103.44 -161.29 REMARK 500 TYR A 143 67.65 -102.17 REMARK 500 ASP A 173 21.81 -76.11 REMARK 500 ILE B 136 -64.35 -95.44 REMARK 500 LYS C 3 56.61 -104.89 REMARK 500 ASP C 21 86.19 -162.78 REMARK 500 ASP C 103 -154.95 -155.52 REMARK 500 ILE C 136 -61.44 -96.71 REMARK 500 HIS C 139 47.58 77.04 REMARK 500 ASN C 144 -150.71 -87.51 REMARK 500 GLU C 172 0.22 -63.12 REMARK 500 SER C 175 -167.45 -109.02 REMARK 500 LYS C 206 113.69 -167.82 REMARK 500 PRO C 230 -162.83 -67.98 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL C 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL C 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL C 303 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2WSO RELATED DB: PDB REMARK 900 CYAN FLUORESCENT PROTEIN, CERULEAN, AT PH ~7 REMARK 999 REMARK 999 SEQUENCE REMARK 999 THIS CONSTRUCT IS A GENE ENGINEERED VARIANT OF THE CYAN FLUORESCENT REMARK 999 PROTEIN CERULEAN DBREF 4RYW A -11 238 PDB 4RYW 4RYW -11 238 DBREF 4RYW B -11 238 PDB 4RYW 4RYW -11 238 DBREF 4RYW C -11 238 PDB 4RYW 4RYW -11 238 SEQRES 1 A 248 MET ARG GLY SER HIS HIS HIS HIS HIS HIS GLY SER VAL SEQRES 2 A 248 SER LYS GLY GLU LYS LEU PHE THR GLY VAL VAL PRO ILE SEQRES 3 A 248 LEU VAL GLU LEU ASP GLY ASP VAL ASN GLY HIS LYS PHE SEQRES 4 A 248 SER VAL SER GLY GLU GLY GLU GLY ASP ALA THR TYR GLY SEQRES 5 A 248 LYS MET SER LEU LYS PHE ILE CYS THR THR GLY LYS LEU SEQRES 6 A 248 PRO VAL PRO TRP PRO THR LEU LYS THR THR LEU CRF MET SEQRES 7 A 248 GLN CYS PHE ALA ARG TYR PRO ASP HIS MET LYS GLN HIS SEQRES 8 A 248 ASP PHE PHE LYS SER ALA MET PRO GLU GLY TYR VAL GLN SEQRES 9 A 248 GLU ARG THR ILE PHE PHE LYS ASP ASP GLY ASN TYR LYS SEQRES 10 A 248 THR ARG ALA GLU VAL LYS PHE GLU GLY ASP THR LEU VAL SEQRES 11 A 248 ASN ARG ILE GLU LEU LYS GLY VAL ASP PHE LYS GLU ASP SEQRES 12 A 248 GLY ASN ILE LEU GLY HIS LYS LEU GLU TYR ASN ALA ILE SEQRES 13 A 248 SER GLY ASN ALA ASN ILE THR ALA ASP LYS GLN LYS ASN SEQRES 14 A 248 GLY ILE LYS ALA TYR PHE THR ILE ARG HIS ASP VAL GLU SEQRES 15 A 248 ASP GLY SER VAL LEU LEU ALA ASP HIS TYR GLN GLN ASN SEQRES 16 A 248 THR PRO ILE GLY ASP GLY PRO VAL LEU LEU PRO ASP ASN SEQRES 17 A 248 HIS TYR LEU SER THR GLN SER LYS GLN SER LYS ASP PRO SEQRES 18 A 248 ASN GLU LYS ARG ASP HIS MET VAL LEU LEU GLU PHE VAL SEQRES 19 A 248 THR ALA ALA GLY ILE PRO LEU GLY ALA ASP GLU LEU SEC SEQRES 20 A 248 LYS SEQRES 1 B 248 MET ARG GLY SER HIS HIS HIS HIS HIS HIS GLY SER VAL SEQRES 2 B 248 SER LYS GLY GLU LYS LEU PHE THR GLY VAL VAL PRO ILE SEQRES 3 B 248 LEU VAL GLU LEU ASP GLY ASP VAL ASN GLY HIS LYS PHE SEQRES 4 B 248 SER VAL SER GLY GLU GLY GLU GLY ASP ALA THR TYR GLY SEQRES 5 B 248 LYS MET SER LEU LYS PHE ILE CYS THR THR GLY LYS LEU SEQRES 6 B 248 PRO VAL PRO TRP PRO THR LEU LYS THR THR LEU CRF MET SEQRES 7 B 248 GLN CYS PHE ALA ARG TYR PRO ASP HIS MET LYS GLN HIS SEQRES 8 B 248 ASP PHE PHE LYS SER ALA MET PRO GLU GLY TYR VAL GLN SEQRES 9 B 248 GLU ARG THR ILE PHE PHE LYS ASP ASP GLY ASN TYR LYS SEQRES 10 B 248 THR ARG ALA GLU VAL LYS PHE GLU GLY ASP THR LEU VAL SEQRES 11 B 248 ASN ARG ILE GLU LEU LYS GLY VAL ASP PHE LYS GLU ASP SEQRES 12 B 248 GLY ASN ILE LEU GLY HIS LYS LEU GLU TYR ASN ALA ILE SEQRES 13 B 248 SER GLY ASN ALA ASN ILE THR ALA ASP LYS GLN LYS ASN SEQRES 14 B 248 GLY ILE LYS ALA TYR PHE THR ILE ARG HIS ASP VAL GLU SEQRES 15 B 248 ASP GLY SER VAL LEU LEU ALA ASP HIS TYR GLN GLN ASN SEQRES 16 B 248 THR PRO ILE GLY ASP GLY PRO VAL LEU LEU PRO ASP ASN SEQRES 17 B 248 HIS TYR LEU SER THR GLN SER LYS GLN SER LYS ASP PRO SEQRES 18 B 248 ASN GLU LYS ARG ASP HIS MET VAL LEU LEU GLU PHE VAL SEQRES 19 B 248 THR ALA ALA GLY ILE PRO LEU GLY ALA ASP GLU LEU SEC SEQRES 20 B 248 LYS SEQRES 1 C 248 MET ARG GLY SER HIS HIS HIS HIS HIS HIS GLY SER VAL SEQRES 2 C 248 SER LYS GLY GLU LYS LEU PHE THR GLY VAL VAL PRO ILE SEQRES 3 C 248 LEU VAL GLU LEU ASP GLY ASP VAL ASN GLY HIS LYS PHE SEQRES 4 C 248 SER VAL SER GLY GLU GLY GLU GLY ASP ALA THR TYR GLY SEQRES 5 C 248 LYS MET SER LEU LYS PHE ILE CYS THR THR GLY LYS LEU SEQRES 6 C 248 PRO VAL PRO TRP PRO THR LEU LYS THR THR LEU CRF MET SEQRES 7 C 248 GLN CYS PHE ALA ARG TYR PRO ASP HIS MET LYS GLN HIS SEQRES 8 C 248 ASP PHE PHE LYS SER ALA MET PRO GLU GLY TYR VAL GLN SEQRES 9 C 248 GLU ARG THR ILE PHE PHE LYS ASP ASP GLY ASN TYR LYS SEQRES 10 C 248 THR ARG ALA GLU VAL LYS PHE GLU GLY ASP THR LEU VAL SEQRES 11 C 248 ASN ARG ILE GLU LEU LYS GLY VAL ASP PHE LYS GLU ASP SEQRES 12 C 248 GLY ASN ILE LEU GLY HIS LYS LEU GLU TYR ASN ALA ILE SEQRES 13 C 248 SER GLY ASN ALA ASN ILE THR ALA ASP LYS GLN LYS ASN SEQRES 14 C 248 GLY ILE LYS ALA TYR PHE THR ILE ARG HIS ASP VAL GLU SEQRES 15 C 248 ASP GLY SER VAL LEU LEU ALA ASP HIS TYR GLN GLN ASN SEQRES 16 C 248 THR PRO ILE GLY ASP GLY PRO VAL LEU LEU PRO ASP ASN SEQRES 17 C 248 HIS TYR LEU SER THR GLN SER LYS GLN SER LYS ASP PRO SEQRES 18 C 248 ASN GLU LYS ARG ASP HIS MET VAL LEU LEU GLU PHE VAL SEQRES 19 C 248 THR ALA ALA GLY ILE PRO LEU GLY ALA ASP GLU LEU SEC SEQRES 20 C 248 LYS MODRES 4RYW CRF A 65 THR MODRES 4RYW CRF A 65 TRP MODRES 4RYW CRF A 65 GLY MODRES 4RYW CRF B 65 THR MODRES 4RYW CRF B 65 TRP MODRES 4RYW CRF B 65 GLY MODRES 4RYW CRF C 65 THR MODRES 4RYW CRF C 65 TRP MODRES 4RYW CRF C 65 GLY HET CRF A 65 24 HET CRF B 65 24 HET CRF C 65 24 HET GOL A 301 6 HET GOL A 302 6 HET GOL B 301 6 HET GOL B 302 6 HET GOL B 303 6 HET GOL B 304 6 HET GOL C 301 6 HET GOL C 302 6 HET GOL C 303 6 HETNAM CRF [(4Z)-2-[(1R,2R)-1-AMINO-2-HYDROXYPROPYL]-4-(1H-INDOL- HETNAM 2 CRF 3-YLMETHYLIDENE)-5-OXO-4,5-DIHYDRO-1H-IMIDAZOL-1- HETNAM 3 CRF YL]ACETIC ACID HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 1 CRF 3(C17 H18 N4 O4) FORMUL 4 GOL 9(C3 H8 O3) FORMUL 13 HOH *164(H2 O) HELIX 1 1 SER A 2 THR A 9 5 8 HELIX 2 2 PRO A 56 LEU A 60 5 5 HELIX 3 3 MET A 68 ALA A 72 5 5 HELIX 4 4 PRO A 75 HIS A 81 5 7 HELIX 5 5 ASP A 82 ALA A 87 1 6 HELIX 6 6 LYS A 156 ASN A 159 5 4 HELIX 7 7 GLY B 4 THR B 9 5 6 HELIX 8 8 ALA B 37 TYR B 39 5 3 HELIX 9 9 PRO B 56 LEU B 60 5 5 HELIX 10 10 MET B 68 ALA B 72 5 5 HELIX 11 11 PRO B 75 HIS B 81 5 7 HELIX 12 12 ASP B 82 ALA B 87 1 6 HELIX 13 13 GLY C 4 THR C 9 5 6 HELIX 14 14 ALA C 37 TYR C 39 5 3 HELIX 15 15 PRO C 56 LYS C 61 5 6 HELIX 16 16 MET C 68 ALA C 72 5 5 HELIX 17 17 PRO C 75 HIS C 81 5 7 HELIX 18 18 ASP C 82 ALA C 87 1 6 SHEET 1 A12 VAL A 11 VAL A 22 0 SHEET 2 A12 HIS A 25 ASP A 36 -1 O GLY A 31 N VAL A 16 SHEET 3 A12 LYS A 41 CYS A 48 -1 O LYS A 41 N ASP A 36 SHEET 4 A12 HIS A 217 ALA A 227 -1 O GLU A 222 N MET A 42 SHEET 5 A12 HIS A 199 SER A 208 -1 N GLN A 204 O PHE A 223 SHEET 6 A12 GLY A 148 ASP A 155 -1 N ILE A 152 O HIS A 199 SHEET 7 A12 GLY A 160 ASP A 170 -1 O GLY A 160 N ASP A 155 SHEET 8 A12 VAL A 176 PRO A 187 -1 O ASN A 185 N ILE A 161 SHEET 9 A12 TYR A 92 PHE A 100 -1 N VAL A 93 O THR A 186 SHEET 10 A12 ASN A 105 GLU A 115 -1 O TYR A 106 N ILE A 98 SHEET 11 A12 THR A 118 VAL A 128 -1 O LYS A 126 N LYS A 107 SHEET 12 A12 VAL A 11 VAL A 22 1 N ASP A 19 O ILE A 123 SHEET 1 B12 VAL B 12 VAL B 22 0 SHEET 2 B12 HIS B 25 ASP B 36 -1 O PHE B 27 N GLY B 20 SHEET 3 B12 LYS B 41 CYS B 48 -1 O LYS B 41 N ASP B 36 SHEET 4 B12 HIS B 217 ALA B 227 -1 O LEU B 220 N LEU B 44 SHEET 5 B12 HIS B 199 SER B 208 -1 N SER B 202 O THR B 225 SHEET 6 B12 GLY B 148 ASP B 155 -1 N GLY B 148 O THR B 203 SHEET 7 B12 GLY B 160 ASP B 170 -1 O LYS B 162 N THR B 153 SHEET 8 B12 VAL B 176 PRO B 187 -1 O LEU B 177 N HIS B 169 SHEET 9 B12 TYR B 92 PHE B 100 -1 N GLU B 95 O GLN B 184 SHEET 10 B12 ASN B 105 GLU B 115 -1 O TYR B 106 N ILE B 98 SHEET 11 B12 THR B 118 VAL B 128 -1 O GLU B 124 N ARG B 109 SHEET 12 B12 VAL B 12 VAL B 22 1 N GLU B 17 O ILE B 123 SHEET 1 C13 GLN C 207 SER C 208 0 SHEET 2 C13 HIS C 217 ALA C 227 -1 O VAL C 219 N SER C 208 SHEET 3 C13 HIS C 199 GLN C 204 -1 N SER C 202 O THR C 225 SHEET 4 C13 GLY C 148 ASP C 155 -1 N ILE C 152 O HIS C 199 SHEET 5 C13 GLY C 160 VAL C 171 -1 O GLY C 160 N ASP C 155 SHEET 6 C13 SER C 175 PRO C 187 -1 O ALA C 179 N ILE C 167 SHEET 7 C13 TYR C 92 PHE C 100 -1 N GLU C 95 O GLN C 184 SHEET 8 C13 ASN C 105 GLU C 115 -1 O ALA C 110 N GLN C 94 SHEET 9 C13 THR C 118 VAL C 128 -1 O VAL C 120 N LYS C 113 SHEET 10 C13 VAL C 12 VAL C 22 1 N GLU C 17 O ILE C 123 SHEET 11 C13 HIS C 25 ASP C 36 -1 O GLY C 35 N VAL C 12 SHEET 12 C13 LYS C 41 CYS C 48 -1 O LYS C 41 N ASP C 36 SHEET 13 C13 HIS C 217 ALA C 227 -1 O MET C 218 N PHE C 46 LINK C LEU A 64 N1 CRF A 65 1555 1555 1.34 LINK C3 CRF A 65 N MET A 68 1555 1555 1.33 LINK C LEU B 64 N1 CRF B 65 1555 1555 1.34 LINK C3 CRF B 65 N MET B 68 1555 1555 1.33 LINK C LEU C 64 N1 CRF C 65 1555 1555 1.34 LINK C3 CRF C 65 N MET C 68 1555 1555 1.33 CISPEP 1 MET A 88 PRO A 89 0 10.22 CISPEP 2 MET B 88 PRO B 89 0 8.58 CISPEP 3 MET C 88 PRO C 89 0 5.93 SITE 1 AC1 3 ASN A 23 ASP A 129 ASP C 129 SITE 1 AC2 4 GLU A 142 TYR A 143 GLU A 172 HOH A 455 SITE 1 AC3 8 GLU B 5 ALA B 37 ALA B 72 ARG B 73 SITE 2 AC3 8 TYR B 74 LYS B 79 LYS B 85 HOH B 448 SITE 1 AC4 10 SER B 86 ALA B 87 GLU B 90 GLY B 91 SITE 2 AC4 10 PRO B 187 ILE B 188 GLY B 189 GLY B 191 SITE 3 AC4 10 PRO B 192 VAL B 193 SITE 1 AC5 7 ASP A 36 TYR A 39 LYS A 41 LYS B 113 SITE 2 AC5 7 GLU B 115 VAL B 120 ARG B 122 SITE 1 AC6 2 LYS C 131 ASP C 133 SITE 1 AC7 3 GLU C 32 LYS C 45 HOH C 411 SITE 1 AC8 9 ASN C 159 PRO C 187 GLY C 189 ASP C 190 SITE 2 AC8 9 GLY C 191 HOH C 416 HOH C 420 HOH C 424 SITE 3 AC8 9 HOH C 440 CRYST1 52.132 98.021 71.671 90.00 111.63 90.00 P 1 21 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019182 0.000000 0.007606 0.00000 SCALE2 0.000000 0.010202 0.000000 0.00000 SCALE3 0.000000 0.000000 0.015009 0.00000