HEADER HYDROLASE 19-DEC-14 4RZB TITLE THE STRUCTURE OF N-FORMIMINO-L-GLUTAMATE IMINOHYDROLASE FROM TITLE 2 PSEUDOMONAS AERUGINOSA COMPLEXED WITH N-FORMIMINO-L-ASPARTATE, SOAKED TITLE 3 WITH MERCURY COMPND MOL_ID: 1; COMPND 2 MOLECULE: N-FORMIMINO-L-GLUTAMATE IMINOHYDROLASE; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PSEUDOMONAS AERUGINOSA PAO1; SOURCE 3 ORGANISM_TAXID: 208964; SOURCE 4 GENE: PA5106; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS AMIDOHYDROLASE FOLD, N-FORMIMINO-L-GLUTAMATE IMINOHYDROLASE, N- KEYWDS 2 FORMIMINO-L-ASPARTATE, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR A.A.FEDOROV,E.V.FEDOROV,R.MARTI-ARBONA,F.M.RAUSHEL,S.C.ALMO REVDAT 3 28-FEB-24 4RZB 1 REMARK LINK REVDAT 2 11-FEB-15 4RZB 1 JRNL REVDAT 1 14-JAN-15 4RZB 0 JRNL AUTH A.A.FEDOROV,R.MARTI-ARBONA,V.V.NEMMARA,D.HITCHCOCK, JRNL AUTH 2 E.V.FEDOROV,S.C.ALMO,F.M.RAUSHEL JRNL TITL STRUCTURE OF N-FORMIMINO-L-GLUTAMATE IMINOHYDROLASE FROM JRNL TITL 2 PSEUDOMONAS AERUGINOSA. JRNL REF BIOCHEMISTRY V. 54 890 2015 JRNL REFN ISSN 0006-2960 JRNL PMID 25559274 JRNL DOI 10.1021/BI501299Y REMARK 2 REMARK 2 RESOLUTION. 1.86 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.8_1069) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.86 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 40.99 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 97124 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.160 REMARK 3 R VALUE (WORKING SET) : 0.160 REMARK 3 FREE R VALUE : 0.176 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 3.010 REMARK 3 FREE R VALUE TEST SET COUNT : 2925 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 40.9962 - 5.1356 1.00 4573 126 0.1542 0.1455 REMARK 3 2 5.1356 - 4.0775 1.00 4566 110 0.1270 0.1323 REMARK 3 3 4.0775 - 3.5624 1.00 4522 148 0.1344 0.1456 REMARK 3 4 3.5624 - 3.2368 1.00 4471 151 0.1434 0.1467 REMARK 3 5 3.2368 - 3.0049 1.00 4482 159 0.1620 0.1826 REMARK 3 6 3.0049 - 2.8278 1.00 4478 139 0.1603 0.1866 REMARK 3 7 2.8278 - 2.6862 1.00 4530 135 0.1612 0.1890 REMARK 3 8 2.6862 - 2.5693 1.00 4471 144 0.1639 0.1901 REMARK 3 9 2.5693 - 2.4704 1.00 4475 155 0.1689 0.1862 REMARK 3 10 2.4704 - 2.3852 1.00 4525 122 0.1577 0.1797 REMARK 3 11 2.3852 - 2.3106 1.00 4487 131 0.1644 0.1772 REMARK 3 12 2.3106 - 2.2445 1.00 4465 139 0.1658 0.1910 REMARK 3 13 2.2445 - 2.1855 1.00 4476 148 0.1721 0.1807 REMARK 3 14 2.1855 - 2.1321 1.00 4485 152 0.1707 0.2003 REMARK 3 15 2.1321 - 2.0837 1.00 4442 151 0.1724 0.2092 REMARK 3 16 2.0837 - 2.0393 1.00 4489 139 0.1777 0.2165 REMARK 3 17 2.0393 - 1.9985 1.00 4491 131 0.1857 0.1992 REMARK 3 18 1.9985 - 1.9608 1.00 4472 150 0.1915 0.2061 REMARK 3 19 1.9608 - 1.9258 1.00 4484 130 0.2027 0.2361 REMARK 3 20 1.9258 - 1.8932 1.00 4464 134 0.2152 0.2445 REMARK 3 21 1.8932 - 1.8626 0.96 4351 131 0.2518 0.2997 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.170 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 18.490 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 7211 REMARK 3 ANGLE : 1.061 9798 REMARK 3 CHIRALITY : 0.077 1048 REMARK 3 PLANARITY : 0.005 1316 REMARK 3 DIHEDRAL : 12.959 2611 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN A REMARK 3 ORIGIN FOR THE GROUP (A): 93.0927 15.1633 107.3406 REMARK 3 T TENSOR REMARK 3 T11: 0.1168 T22: 0.0958 REMARK 3 T33: 0.1245 T12: -0.0079 REMARK 3 T13: -0.0329 T23: 0.0070 REMARK 3 L TENSOR REMARK 3 L11: 0.7705 L22: 0.7886 REMARK 3 L33: 0.9869 L12: 0.0058 REMARK 3 L13: 0.3742 L23: 0.2580 REMARK 3 S TENSOR REMARK 3 S11: 0.0814 S12: 0.0734 S13: -0.0730 REMARK 3 S21: 0.0547 S22: 0.0228 S23: -0.0768 REMARK 3 S31: 0.1162 S32: 0.0535 S33: -0.0910 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN B REMARK 3 ORIGIN FOR THE GROUP (A): 91.2937 49.4945 112.3097 REMARK 3 T TENSOR REMARK 3 T11: 0.1038 T22: 0.1025 REMARK 3 T33: 0.1782 T12: -0.0281 REMARK 3 T13: -0.0114 T23: 0.0238 REMARK 3 L TENSOR REMARK 3 L11: 0.6187 L22: 1.0115 REMARK 3 L33: 0.9363 L12: -0.3016 REMARK 3 L13: -0.0407 L23: 0.4273 REMARK 3 S TENSOR REMARK 3 S11: -0.0116 S12: -0.0049 S13: 0.1433 REMARK 3 S21: -0.0306 S22: 0.0381 S23: -0.2072 REMARK 3 S31: -0.0862 S32: 0.0796 S33: -0.0002 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4RZB COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 24-DEC-14. REMARK 100 THE DEPOSITION ID IS D_1000087982. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-JUN-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.9 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X4A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97915 REMARK 200 MONOCHROMATOR : SI 111 CHANNEL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 97124 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.863 REMARK 200 RESOLUTION RANGE LOW (A) : 40.986 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 59.12 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.01 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.4M SODIUM SULFATE, PH 6.9, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 293.0K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 50.78000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 70.91550 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 50.78000 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 70.91550 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 7610 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 29940 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -220.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 741 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 908 LIES ON A SPECIAL POSITION. REMARK 375 HOH A1061 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 689 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ASP A 453 REMARK 465 MET B 1 REMARK 465 ASP B 453 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 HIS A 56 119.02 -163.32 REMARK 500 GLU A 69 56.49 -104.65 REMARK 500 SER A 207 170.08 179.52 REMARK 500 HIS A 224 46.42 -104.01 REMARK 500 ASP A 262 -159.06 -147.87 REMARK 500 HIS A 269 -71.10 74.37 REMARK 500 ASP A 320 -99.23 58.34 REMARK 500 GLU B 69 56.68 -102.40 REMARK 500 ASP B 262 -158.19 -151.32 REMARK 500 HIS B 269 -71.21 76.57 REMARK 500 ALA B 270 28.87 49.96 REMARK 500 ASP B 320 -98.06 60.02 REMARK 500 SER B 326 112.25 -161.29 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 502 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 56 NE2 REMARK 620 2 HIS A 58 NE2 101.8 REMARK 620 3 HIS A 232 NE2 91.9 102.0 REMARK 620 4 ASP A 320 OD1 88.9 85.8 171.8 REMARK 620 5 HOH A1040 O 117.3 137.3 93.8 78.6 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HG A 504 HG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 102 SG REMARK 620 2 HOH A 739 O 75.2 REMARK 620 3 HOH A 758 O 99.0 142.7 REMARK 620 4 HOH A1057 O 173.3 102.3 86.8 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HG A 505 HG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 102 SG REMARK 620 2 CYS A 102 SG 49.8 REMARK 620 3 HOH A 758 O 107.0 94.5 REMARK 620 4 HOH A 790 O 102.8 152.5 92.0 REMARK 620 5 HOH A 812 O 59.5 101.8 136.7 57.0 REMARK 620 6 HOH A 934 O 123.1 138.8 45.3 48.9 104.2 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HG A 503 HG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 243 SG REMARK 620 2 HOH A1083 O 174.5 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 502 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 56 NE2 REMARK 620 2 HIS B 58 NE2 102.8 REMARK 620 3 HIS B 232 NE2 93.9 105.2 REMARK 620 4 ASP B 320 OD1 85.3 84.0 170.7 REMARK 620 5 HOH B 601 O 115.9 135.4 93.8 78.2 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HG B 504 HG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 102 SG REMARK 620 2 CYS B 102 SG 47.2 REMARK 620 3 HOH B 903 O 115.4 102.6 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HG B 505 HG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 102 SG REMARK 620 2 HOH B 726 O 77.7 REMARK 620 3 HOH B 797 O 175.4 98.1 REMARK 620 4 HOH B 903 O 104.5 145.3 80.1 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HG B 503 HG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 243 SG REMARK 620 2 HOH B1014 O 172.5 REMARK 620 N 1 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NFQ A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HG A 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HG A 504 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HG A 505 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 506 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 507 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NFQ B 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HG B 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HG B 504 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HG B 505 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 506 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 507 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 508 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3MDW RELATED DB: PDB REMARK 900 THE SAME PROTEIN COMPLEXED WITH THE SAME INHIBITOR BUT NOT SOAKED REMARK 900 WITH MERCURY DBREF 4RZB A 1 453 UNP Q9HU77 Q9HU77_PSEAE 1 453 DBREF 4RZB B 1 453 UNP Q9HU77 Q9HU77_PSEAE 1 453 SEQRES 1 A 453 MET SER ALA ILE PHE ALA GLU ARG ALA LEU LEU PRO GLU SEQRES 2 A 453 GLY TRP ALA ARG ASN VAL ARG PHE GLU ILE SER ALA ASP SEQRES 3 A 453 GLY VAL LEU ALA GLU ILE ARG PRO ASP ALA ASN ALA ASP SEQRES 4 A 453 GLY ALA GLU ARG LEU GLY GLY ALA VAL LEU PRO GLY MET SEQRES 5 A 453 PRO ASN LEU HIS SER HIS ALA PHE GLN ARG ALA MET ALA SEQRES 6 A 453 GLY LEU ALA GLU VAL ALA GLY ASN PRO ASN ASP SER PHE SEQRES 7 A 453 TRP THR TRP ARG GLU LEU MET TYR ARG MET VAL ALA ARG SEQRES 8 A 453 LEU SER PRO GLU GLN ILE GLU VAL ILE ALA CYS GLN LEU SEQRES 9 A 453 TYR ILE GLU MET LEU LYS ALA GLY TYR THR ALA VAL ALA SEQRES 10 A 453 GLU PHE HIS TYR VAL HIS HIS ASP LEU ASP GLY ARG SER SEQRES 11 A 453 TYR ALA ASP PRO ALA GLU LEU SER LEU ARG ILE SER ARG SEQRES 12 A 453 ALA ALA SER ALA ALA GLY ILE GLY LEU THR LEU LEU PRO SEQRES 13 A 453 VAL LEU TYR SER HIS ALA GLY PHE GLY GLY GLN PRO ALA SEQRES 14 A 453 SER GLU GLY GLN ARG ARG PHE ILE ASN GLY SER GLU ALA SEQRES 15 A 453 TYR LEU GLU LEU LEU GLN ARG LEU ARG ALA PRO LEU GLU SEQRES 16 A 453 ALA ALA GLY HIS SER LEU GLY LEU CYS PHE HIS SER LEU SEQRES 17 A 453 ARG ALA VAL THR PRO GLN GLN ILE ALA THR VAL LEU ALA SEQRES 18 A 453 ALA GLY HIS ASP ASP LEU PRO VAL HIS ILE HIS ILE ALA SEQRES 19 A 453 GLU GLN GLN LYS GLU VAL ASP ASP CYS GLN ALA TRP SER SEQRES 20 A 453 GLY ARG ARG PRO LEU GLN TRP LEU TYR GLU ASN VAL ALA SEQRES 21 A 453 VAL ASP GLN ARG TRP CYS LEU VAL HIS ALA THR HIS ALA SEQRES 22 A 453 ASP PRO ALA GLU VAL ALA ALA MET ALA ARG SER GLY ALA SEQRES 23 A 453 VAL ALA GLY LEU CYS LEU SER THR GLU ALA ASN LEU GLY SEQRES 24 A 453 ASP GLY ILE PHE PRO ALA THR ASP PHE LEU ALA GLN GLY SEQRES 25 A 453 GLY ARG LEU GLY ILE GLY SER ASP SER HIS VAL SER LEU SEQRES 26 A 453 SER VAL VAL GLU GLU LEU ARG TRP LEU GLU TYR GLY GLN SEQRES 27 A 453 ARG LEU ARG ASP ARG LYS ARG ASN ARG LEU TYR ARG ASP SEQRES 28 A 453 ASP GLN PRO MET ILE GLY ARG THR LEU TYR ASP ALA ALA SEQRES 29 A 453 LEU ALA GLY GLY ALA GLN ALA LEU GLY GLN PRO ILE GLY SEQRES 30 A 453 SER LEU ALA VAL GLY ARG ARG ALA ASP LEU LEU VAL LEU SEQRES 31 A 453 ASP GLY ASN ASP PRO TYR LEU ALA SER ALA GLU GLY ASP SEQRES 32 A 453 ALA LEU LEU ASN ARG TRP LEU PHE ALA GLY GLY ASP ARG SEQRES 33 A 453 GLN VAL ARG ASP VAL MET VAL ALA GLY ARG TRP VAL VAL SEQRES 34 A 453 ARG ASP GLY ARG HIS ALA GLY GLU GLU ARG SER ALA ARG SEQRES 35 A 453 ALA PHE VAL GLN VAL LEU GLY GLU LEU LEU ASP SEQRES 1 B 453 MET SER ALA ILE PHE ALA GLU ARG ALA LEU LEU PRO GLU SEQRES 2 B 453 GLY TRP ALA ARG ASN VAL ARG PHE GLU ILE SER ALA ASP SEQRES 3 B 453 GLY VAL LEU ALA GLU ILE ARG PRO ASP ALA ASN ALA ASP SEQRES 4 B 453 GLY ALA GLU ARG LEU GLY GLY ALA VAL LEU PRO GLY MET SEQRES 5 B 453 PRO ASN LEU HIS SER HIS ALA PHE GLN ARG ALA MET ALA SEQRES 6 B 453 GLY LEU ALA GLU VAL ALA GLY ASN PRO ASN ASP SER PHE SEQRES 7 B 453 TRP THR TRP ARG GLU LEU MET TYR ARG MET VAL ALA ARG SEQRES 8 B 453 LEU SER PRO GLU GLN ILE GLU VAL ILE ALA CYS GLN LEU SEQRES 9 B 453 TYR ILE GLU MET LEU LYS ALA GLY TYR THR ALA VAL ALA SEQRES 10 B 453 GLU PHE HIS TYR VAL HIS HIS ASP LEU ASP GLY ARG SER SEQRES 11 B 453 TYR ALA ASP PRO ALA GLU LEU SER LEU ARG ILE SER ARG SEQRES 12 B 453 ALA ALA SER ALA ALA GLY ILE GLY LEU THR LEU LEU PRO SEQRES 13 B 453 VAL LEU TYR SER HIS ALA GLY PHE GLY GLY GLN PRO ALA SEQRES 14 B 453 SER GLU GLY GLN ARG ARG PHE ILE ASN GLY SER GLU ALA SEQRES 15 B 453 TYR LEU GLU LEU LEU GLN ARG LEU ARG ALA PRO LEU GLU SEQRES 16 B 453 ALA ALA GLY HIS SER LEU GLY LEU CYS PHE HIS SER LEU SEQRES 17 B 453 ARG ALA VAL THR PRO GLN GLN ILE ALA THR VAL LEU ALA SEQRES 18 B 453 ALA GLY HIS ASP ASP LEU PRO VAL HIS ILE HIS ILE ALA SEQRES 19 B 453 GLU GLN GLN LYS GLU VAL ASP ASP CYS GLN ALA TRP SER SEQRES 20 B 453 GLY ARG ARG PRO LEU GLN TRP LEU TYR GLU ASN VAL ALA SEQRES 21 B 453 VAL ASP GLN ARG TRP CYS LEU VAL HIS ALA THR HIS ALA SEQRES 22 B 453 ASP PRO ALA GLU VAL ALA ALA MET ALA ARG SER GLY ALA SEQRES 23 B 453 VAL ALA GLY LEU CYS LEU SER THR GLU ALA ASN LEU GLY SEQRES 24 B 453 ASP GLY ILE PHE PRO ALA THR ASP PHE LEU ALA GLN GLY SEQRES 25 B 453 GLY ARG LEU GLY ILE GLY SER ASP SER HIS VAL SER LEU SEQRES 26 B 453 SER VAL VAL GLU GLU LEU ARG TRP LEU GLU TYR GLY GLN SEQRES 27 B 453 ARG LEU ARG ASP ARG LYS ARG ASN ARG LEU TYR ARG ASP SEQRES 28 B 453 ASP GLN PRO MET ILE GLY ARG THR LEU TYR ASP ALA ALA SEQRES 29 B 453 LEU ALA GLY GLY ALA GLN ALA LEU GLY GLN PRO ILE GLY SEQRES 30 B 453 SER LEU ALA VAL GLY ARG ARG ALA ASP LEU LEU VAL LEU SEQRES 31 B 453 ASP GLY ASN ASP PRO TYR LEU ALA SER ALA GLU GLY ASP SEQRES 32 B 453 ALA LEU LEU ASN ARG TRP LEU PHE ALA GLY GLY ASP ARG SEQRES 33 B 453 GLN VAL ARG ASP VAL MET VAL ALA GLY ARG TRP VAL VAL SEQRES 34 B 453 ARG ASP GLY ARG HIS ALA GLY GLU GLU ARG SER ALA ARG SEQRES 35 B 453 ALA PHE VAL GLN VAL LEU GLY GLU LEU LEU ASP HET NFQ A 501 11 HET ZN A 502 1 HET HG A 503 1 HET HG A 504 1 HET HG A 505 1 HET SO4 A 506 5 HET GOL A 507 6 HET NFQ B 501 11 HET ZN B 502 1 HET HG B 503 1 HET HG B 504 1 HET HG B 505 1 HET SO4 B 506 5 HET SO4 B 507 5 HET SO4 B 508 5 HETNAM NFQ N-[(E)-IMINOMETHYL]-L-ASPARTIC ACID HETNAM ZN ZINC ION HETNAM HG MERCURY (II) ION HETNAM SO4 SULFATE ION HETNAM GOL GLYCEROL HETSYN NFQ N-FORMIMINO-L-ASPARTATE HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 NFQ 2(C5 H8 N2 O4) FORMUL 4 ZN 2(ZN 2+) FORMUL 5 HG 6(HG 2+) FORMUL 8 SO4 4(O4 S 2-) FORMUL 9 GOL C3 H8 O3 FORMUL 18 HOH *897(H2 O) HELIX 1 1 HIS A 58 ALA A 65 5 8 HELIX 2 2 SER A 77 ALA A 90 1 14 HELIX 3 3 SER A 93 ALA A 111 1 19 HELIX 4 4 ALA A 135 GLY A 149 1 15 HELIX 5 5 SER A 170 ILE A 177 5 8 HELIX 6 6 GLY A 179 ALA A 197 1 19 HELIX 7 7 THR A 212 ALA A 221 1 10 HELIX 8 8 GLN A 236 GLY A 248 1 13 HELIX 9 9 ARG A 250 VAL A 259 1 10 HELIX 10 10 ASP A 274 GLY A 285 1 12 HELIX 11 11 CYS A 291 LEU A 298 1 8 HELIX 12 12 PRO A 304 GLN A 311 1 8 HELIX 13 13 SER A 326 ARG A 343 1 18 HELIX 14 14 MET A 355 GLY A 373 1 19 HELIX 15 15 ASP A 394 SER A 399 1 6 HELIX 16 16 GLU A 401 GLY A 413 1 13 HELIX 17 17 GLY A 414 ARG A 416 5 3 HELIX 18 18 GLY A 436 LEU A 451 1 16 HELIX 19 19 HIS B 58 ALA B 65 5 8 HELIX 20 20 SER B 77 ALA B 90 1 14 HELIX 21 21 SER B 93 GLY B 112 1 20 HELIX 22 22 ALA B 135 GLY B 149 1 15 HELIX 23 23 SER B 170 ILE B 177 5 8 HELIX 24 24 GLY B 179 ALA B 197 1 19 HELIX 25 25 THR B 212 ALA B 221 1 10 HELIX 26 26 GLN B 236 GLY B 248 1 13 HELIX 27 27 ARG B 250 VAL B 259 1 10 HELIX 28 28 ASP B 274 GLY B 285 1 12 HELIX 29 29 CYS B 291 LEU B 298 1 8 HELIX 30 30 PRO B 304 GLN B 311 1 8 HELIX 31 31 SER B 326 ARG B 343 1 18 HELIX 32 32 MET B 355 GLY B 373 1 19 HELIX 33 33 ASP B 394 SER B 399 1 6 HELIX 34 34 GLU B 401 GLY B 413 1 13 HELIX 35 35 GLY B 414 ARG B 416 5 3 HELIX 36 36 GLY B 436 LEU B 452 1 17 SHEET 1 A 4 LEU A 29 ARG A 33 0 SHEET 2 A 4 GLY A 14 ILE A 23 -1 N GLU A 22 O ALA A 30 SHEET 3 A 4 ALA A 3 LEU A 11 -1 N ILE A 4 O PHE A 21 SHEET 4 A 4 GLU A 42 ARG A 43 1 O GLU A 42 N PHE A 5 SHEET 1 B 4 VAL A 48 PRO A 50 0 SHEET 2 B 4 LEU A 387 LEU A 390 -1 O LEU A 388 N LEU A 49 SHEET 3 B 4 VAL A 418 VAL A 423 -1 O ASP A 420 N VAL A 389 SHEET 4 B 4 ARG A 426 VAL A 429 -1 O VAL A 428 N VAL A 421 SHEET 1 C 4 MET A 52 SER A 57 0 SHEET 2 C 4 TYR A 113 HIS A 120 1 O ALA A 115 N ASN A 54 SHEET 3 C 4 GLY A 151 PRO A 156 1 O LEU A 155 N GLU A 118 SHEET 4 C 4 SER A 200 LEU A 201 1 O SER A 200 N LEU A 152 SHEET 1 D 2 HIS A 161 GLY A 163 0 SHEET 2 D 2 GLN A 167 PRO A 168 -1 O GLN A 167 N ALA A 162 SHEET 1 E 5 LEU A 203 SER A 207 0 SHEET 2 E 5 VAL A 229 ILE A 233 1 O HIS A 230 N LEU A 203 SHEET 3 E 5 TRP A 265 HIS A 269 1 O VAL A 268 N ILE A 231 SHEET 4 E 5 VAL A 287 LEU A 290 1 O GLY A 289 N HIS A 269 SHEET 5 E 5 ARG A 314 ILE A 317 1 O ARG A 314 N ALA A 288 SHEET 1 F 4 LEU B 29 ARG B 33 0 SHEET 2 F 4 GLY B 14 ILE B 23 -1 N GLU B 22 O GLU B 31 SHEET 3 F 4 ALA B 3 LEU B 11 -1 N ILE B 4 O PHE B 21 SHEET 4 F 4 GLU B 42 ARG B 43 1 O GLU B 42 N PHE B 5 SHEET 1 G 4 VAL B 48 PRO B 50 0 SHEET 2 G 4 LEU B 387 LEU B 390 -1 O LEU B 388 N LEU B 49 SHEET 3 G 4 VAL B 418 VAL B 423 -1 O MET B 422 N LEU B 387 SHEET 4 G 4 ARG B 426 VAL B 429 -1 O VAL B 428 N VAL B 421 SHEET 1 H 4 MET B 52 SER B 57 0 SHEET 2 H 4 TYR B 113 HIS B 120 1 O ALA B 115 N ASN B 54 SHEET 3 H 4 GLY B 151 PRO B 156 1 O LEU B 155 N GLU B 118 SHEET 4 H 4 SER B 200 LEU B 201 1 O SER B 200 N LEU B 152 SHEET 1 I 2 HIS B 161 GLY B 163 0 SHEET 2 I 2 GLN B 167 PRO B 168 -1 O GLN B 167 N ALA B 162 SHEET 1 J 5 LEU B 203 PHE B 205 0 SHEET 2 J 5 VAL B 229 ILE B 233 1 O HIS B 230 N PHE B 205 SHEET 3 J 5 TRP B 265 HIS B 269 1 O VAL B 268 N ILE B 231 SHEET 4 J 5 VAL B 287 LEU B 290 1 O GLY B 289 N HIS B 269 SHEET 5 J 5 ARG B 314 ILE B 317 1 O ARG B 314 N ALA B 288 LINK NE2 HIS A 56 ZN ZN A 502 1555 1555 2.05 LINK NE2 HIS A 58 ZN ZN A 502 1555 1555 2.02 LINK SG BCYS A 102 HG HG A 504 1555 1555 2.49 LINK SG ACYS A 102 HG HG A 505 1555 1555 2.43 LINK SG BCYS A 102 HG HG A 505 1555 1555 2.66 LINK NE2 HIS A 232 ZN ZN A 502 1555 1555 2.19 LINK SG CYS A 243 HG HG A 503 1555 1555 2.36 LINK OD1 ASP A 320 ZN ZN A 502 1555 1555 2.54 LINK ZN ZN A 502 O HOH A1040 1555 1555 1.98 LINK HG HG A 503 O HOH A1083 1555 1555 2.29 LINK HG HG A 504 O HOH A 739 1555 1555 2.95 LINK HG HG A 504 O HOH A 758 1555 1555 2.96 LINK HG HG A 504 O HOH A1057 1555 1555 2.29 LINK HG HG A 505 O HOH A 758 1555 1555 2.99 LINK HG HG A 505 O HOH A 790 1555 1555 3.16 LINK HG HG A 505 O HOH A 812 1555 1555 2.61 LINK HG HG A 505 O HOH A 934 1555 1555 3.02 LINK NE2 HIS B 56 ZN ZN B 502 1555 1555 1.99 LINK NE2 HIS B 58 ZN ZN B 502 1555 1555 2.01 LINK SG ACYS B 102 HG HG B 504 1555 1555 2.33 LINK SG BCYS B 102 HG HG B 504 1555 1555 2.67 LINK SG BCYS B 102 HG HG B 505 1555 1555 2.53 LINK NE2 HIS B 232 ZN ZN B 502 1555 1555 2.16 LINK SG CYS B 243 HG HG B 503 1555 1555 2.39 LINK OD1 ASP B 320 ZN ZN B 502 1555 1555 2.53 LINK ZN ZN B 502 O HOH B 601 1555 1555 2.00 LINK HG HG B 503 O HOH B1014 1555 1555 2.35 LINK HG HG B 504 O HOH B 903 1555 1555 3.05 LINK HG HG B 505 O HOH B 726 1555 1555 2.55 LINK HG HG B 505 O HOH B 797 1555 1555 2.69 LINK HG HG B 505 O HOH B 903 1555 1555 3.10 SITE 1 AC1 14 HIS A 58 GLN A 61 PHE A 78 ARG A 82 SITE 2 AC1 14 TYR A 121 HIS A 206 ARG A 209 GLU A 235 SITE 3 AC1 14 LEU A 298 HOH A 620 HOH A 652 HOH A 677 SITE 4 AC1 14 HOH A 678 HOH A1040 SITE 1 AC2 5 HIS A 56 HIS A 58 HIS A 232 ASP A 320 SITE 2 AC2 5 HOH A1040 SITE 1 AC3 4 PHE A 164 CYS A 243 SER A 247 HOH A1083 SITE 1 AC4 6 GLU A 98 CYS A 102 HG A 505 HOH A 739 SITE 2 AC4 6 HOH A 758 HOH A1057 SITE 1 AC5 5 CYS A 102 HG A 504 HOH A 758 HOH A 812 SITE 2 AC5 5 HOH A 934 SITE 1 AC6 6 GLY A 179 SER A 180 GLN A 215 HOH A 668 SITE 2 AC6 6 HOH A 915 HOH A1051 SITE 1 AC7 7 SER A 2 ILE A 23 SER A 24 GLY A 425 SITE 2 AC7 7 HOH A 836 HOH A 908 HOH A 929 SITE 1 AC8 15 HIS B 58 GLN B 61 PHE B 78 ARG B 82 SITE 2 AC8 15 TYR B 121 HIS B 206 ARG B 209 GLU B 235 SITE 3 AC8 15 LEU B 298 ASP B 320 HOH B 601 HOH B 620 SITE 4 AC8 15 HOH B 638 HOH B 674 HOH B 677 SITE 1 AC9 5 HIS B 56 HIS B 58 HIS B 232 ASP B 320 SITE 2 AC9 5 HOH B 601 SITE 1 BC1 4 PHE B 164 CYS B 243 SER B 247 HOH B1014 SITE 1 BC2 3 CYS B 102 HG B 505 HOH B 903 SITE 1 BC3 5 GLU B 98 CYS B 102 HG B 504 HOH B 726 SITE 2 BC3 5 HOH B 797 SITE 1 BC4 3 ILE A 302 ILE B 302 HOH B 828 SITE 1 BC5 5 GLY B 179 SER B 180 GLU B 181 GLN B 215 SITE 2 BC5 5 HOH B 695 SITE 1 BC6 6 GLN B 237 ARG B 250 HIS B 272 HOH B1011 SITE 2 BC6 6 HOH B1012 HOH B1013 CRYST1 101.560 141.831 86.415 90.00 107.18 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009846 0.000000 0.003044 0.00000 SCALE2 0.000000 0.007051 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012113 0.00000