HEADER OXIDOREDUCTASE 19-JAN-15 4S24 TITLE 1.7 ANGSTROM CRYSTAL STRUCTURE OF OF PUTATIVE MODULATOR OF DRUG TITLE 2 ACTIVITY (APO- FORM) FROM YERSINIA PESTIS CO92 COMPND MOL_ID: 1; COMPND 2 MOLECULE: MODULATOR OF DRUG ACTIVITY B; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: YERSINIA PESTIS CO92; SOURCE 3 ORGANISM_TAXID: 214092; SOURCE 4 STRAIN: CO92; SOURCE 5 GENE: MDAB; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)-MAGIC; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PMCSG53 KEYWDS STRUCTURAL GENOMICS, NIAID, NATIONAL INSTITUTE OF ALLERGY AND KEYWDS 2 INFECTIOUS DISEASES, CENTER FOR STRUCTURAL GENOMICS OF INFECTIOUS KEYWDS 3 DISEASES, CSGID, FLAVODOXIN-LIKE FOLD, OXIDOREDUCTASE, NADPH KEYWDS 4 DEHYDROGENASE (QUINONE) ACTIVITY, FLAVIN ADENINE DINUCLEOTIDE KEYWDS 5 BINDING EXPDTA X-RAY DIFFRACTION AUTHOR G.MINASOV,L.SHUVALOVA,I.DUBROVSKA,K.FLORES,S.GRIMSHAW,K.KWON, AUTHOR 2 W.F.ANDERSON,CENTER FOR STRUCTURAL GENOMICS OF INFECTIOUS DISEASES AUTHOR 3 (CSGID) REVDAT 2 22-NOV-17 4S24 1 REMARK REVDAT 1 04-FEB-15 4S24 0 JRNL AUTH G.MINASOV,L.SHUVALOVA,I.DUBROVSKA,K.FLORES,S.GRIMSHAW, JRNL AUTH 2 K.KWON,W.F.ANDERSON, JRNL AUTH 3 CENTER FOR STRUCTURAL GENOMICS OF INFECTIOUS DISEASES JRNL AUTH 4 (CSGID) JRNL TITL 1.7 ANGSTROM CRYSTAL STRUCTURE OF OF PUTATIVE MODULATOR OF JRNL TITL 2 DRUG ACTIVITY (APO- FORM) FROM YERSINIA PESTIS CO92. JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0073 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.41 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 27589 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.149 REMARK 3 R VALUE (WORKING SET) : 0.149 REMARK 3 FREE R VALUE : 0.166 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 1407 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.70 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.75 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1980 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.1740 REMARK 3 BIN FREE R VALUE SET COUNT : 116 REMARK 3 BIN FREE R VALUE : 0.1820 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1531 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 45 REMARK 3 SOLVENT ATOMS : 175 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 25.70 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 33.70 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.81000 REMARK 3 B22 (A**2) : 0.81000 REMARK 3 B33 (A**2) : -2.64000 REMARK 3 B12 (A**2) : 0.41000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.079 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.075 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.045 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.776 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.972 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.968 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1762 ; 0.009 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 1643 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2387 ; 1.432 ; 1.965 REMARK 3 BOND ANGLES OTHERS (DEGREES): 3793 ; 0.812 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 216 ; 3.941 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 83 ;34.060 ;24.458 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 261 ; 9.683 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 7 ;18.773 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 243 ; 0.102 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2018 ; 0.022 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 421 ; 0.017 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 840 ; 1.795 ; 2.230 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 839 ; 1.778 ; 2.229 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1064 ; 2.784 ; 3.329 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 1065 ; 2.784 ; 3.329 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 922 ; 2.641 ; 2.551 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 922 ; 2.604 ; 2.552 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 1324 ; 3.992 ; 3.673 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 2082 ; 7.212 ;19.623 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 2011 ; 6.980 ;18.696 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 0 A 12 REMARK 3 ORIGIN FOR THE GROUP (A): 47.1158 42.7061 1.4745 REMARK 3 T TENSOR REMARK 3 T11: 0.0693 T22: 0.0514 REMARK 3 T33: 0.0649 T12: -0.0491 REMARK 3 T13: -0.0513 T23: 0.0184 REMARK 3 L TENSOR REMARK 3 L11: 6.0956 L22: 4.9674 REMARK 3 L33: 2.3336 L12: -5.2273 REMARK 3 L13: 1.5937 L23: -1.7105 REMARK 3 S TENSOR REMARK 3 S11: -0.1020 S12: 0.1467 S13: 0.0797 REMARK 3 S21: -0.0815 S22: 0.0010 S23: 0.0271 REMARK 3 S31: -0.0144 S32: 0.0466 S33: 0.1010 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 13 A 18 REMARK 3 ORIGIN FOR THE GROUP (A): 61.2058 26.3946 -3.0125 REMARK 3 T TENSOR REMARK 3 T11: 0.5006 T22: 0.3666 REMARK 3 T33: 0.2254 T12: 0.0410 REMARK 3 T13: 0.0709 T23: 0.0260 REMARK 3 L TENSOR REMARK 3 L11: 7.9575 L22: 1.3703 REMARK 3 L33: 1.7580 L12: -2.7992 REMARK 3 L13: 3.6558 L23: -1.1149 REMARK 3 S TENSOR REMARK 3 S11: 0.4714 S12: 0.1141 S13: -0.4843 REMARK 3 S21: -0.0205 S22: -0.2769 S23: 0.2876 REMARK 3 S31: 0.3031 S32: -0.0590 S33: -0.1946 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 19 A 46 REMARK 3 ORIGIN FOR THE GROUP (A): 47.4316 43.0564 -3.8813 REMARK 3 T TENSOR REMARK 3 T11: 0.0959 T22: 0.0674 REMARK 3 T33: 0.0622 T12: -0.0463 REMARK 3 T13: -0.0565 T23: 0.0280 REMARK 3 L TENSOR REMARK 3 L11: 1.3140 L22: 1.2632 REMARK 3 L33: 1.8334 L12: -0.8608 REMARK 3 L13: 0.5731 L23: -0.1676 REMARK 3 S TENSOR REMARK 3 S11: -0.0399 S12: 0.2178 S13: 0.1340 REMARK 3 S21: -0.2204 S22: -0.0148 S23: 0.0266 REMARK 3 S31: -0.0105 S32: 0.1356 S33: 0.0547 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 47 A 125 REMARK 3 ORIGIN FOR THE GROUP (A): 45.1938 39.6779 13.3103 REMARK 3 T TENSOR REMARK 3 T11: 0.0244 T22: 0.0327 REMARK 3 T33: 0.0384 T12: 0.0133 REMARK 3 T13: -0.0159 T23: -0.0041 REMARK 3 L TENSOR REMARK 3 L11: 0.8048 L22: 1.3588 REMARK 3 L33: 0.7091 L12: -0.2253 REMARK 3 L13: 0.3000 L23: -0.3909 REMARK 3 S TENSOR REMARK 3 S11: -0.0944 S12: -0.1236 S13: 0.0464 REMARK 3 S21: 0.0030 S22: 0.0949 S23: 0.1739 REMARK 3 S31: -0.0742 S32: -0.1008 S33: -0.0005 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 126 A 154 REMARK 3 ORIGIN FOR THE GROUP (A): 40.5937 21.3065 6.3395 REMARK 3 T TENSOR REMARK 3 T11: 0.0742 T22: 0.0682 REMARK 3 T33: 0.1215 T12: -0.0439 REMARK 3 T13: -0.0549 T23: 0.0350 REMARK 3 L TENSOR REMARK 3 L11: 2.2986 L22: 4.5707 REMARK 3 L33: 1.3650 L12: -1.2956 REMARK 3 L13: -0.4443 L23: 1.6862 REMARK 3 S TENSOR REMARK 3 S11: 0.0276 S12: 0.1049 S13: -0.3245 REMARK 3 S21: -0.2469 S22: 0.0384 S23: 0.3641 REMARK 3 S31: 0.0205 S32: -0.1807 S33: -0.0659 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 155 A 194 REMARK 3 ORIGIN FOR THE GROUP (A): 40.6006 32.9032 -2.4008 REMARK 3 T TENSOR REMARK 3 T11: 0.1113 T22: 0.0457 REMARK 3 T33: 0.1123 T12: -0.0205 REMARK 3 T13: -0.0795 T23: 0.0037 REMARK 3 L TENSOR REMARK 3 L11: 0.8747 L22: 0.2921 REMARK 3 L33: 2.3018 L12: -0.2903 REMARK 3 L13: 0.3070 L23: 0.0268 REMARK 3 S TENSOR REMARK 3 S11: 0.0561 S12: 0.0671 S13: -0.1151 REMARK 3 S21: -0.1094 S22: 0.0153 S23: 0.1643 REMARK 3 S31: 0.2318 S32: -0.0507 S33: -0.0714 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 4S24 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 23-JAN-15. REMARK 100 THE DEPOSITION ID IS D_1000088083. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 11-DEC-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.2 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 21-ID-G REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97856 REMARK 200 MONOCHROMATOR : DIAMOND REMARK 200 OPTICS : BERYLLIUM LENSES REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 29069 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.700 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 15.20 REMARK 200 R MERGE (I) : 0.06700 REMARK 200 R SYM (I) : 0.06700 REMARK 200 FOR THE DATA SET : 62.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.73 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 15.50 REMARK 200 R MERGE FOR SHELL (I) : 0.56000 REMARK 200 R SYM FOR SHELL (I) : 0.56000 REMARK 200 FOR SHELL : 6.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SHELXS REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 55.48 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.76 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PROTEIN: 10.2 MG/ML, 0.1M TRIS HCL (PH REMARK 280 8.3), SCREEN: JSCG+ (C6), 0.1M PHOSPHATE-CITRATE (PH 4.2), 40% REMARK 280 (V/V) PEG 300, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 61 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+5/6 REMARK 290 6555 X-Y,X,Z+1/6 REMARK 290 7555 Y,X,-Z+1/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+2/3 REMARK 290 10555 -Y,-X,-Z+5/6 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+1/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 55.58867 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 111.17733 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 83.38300 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 138.97167 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 27.79433 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 55.58867 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 111.17733 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 138.97167 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 83.38300 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 27.79433 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6900 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 16350 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -49.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.500000 0.866025 0.000000 0.00000 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 27.79433 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 317 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 354 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 365 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A -2 REMARK 465 ASN A -1 REMARK 465 ARG A 101 REMARK 465 SER A 102 REMARK 465 ASP A 103 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 16 118.93 178.12 REMARK 500 ALA A 19 54.81 -140.83 REMARK 500 ASP A 176 68.92 -157.76 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PGE A 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PEG A 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PEG A 204 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 1PE A 205 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3RPE RELATED DB: PDB REMARK 900 STRUCTURE OF THE COMPLEX WITH FAD REMARK 900 RELATED ID: CSGID-IDP00511 RELATED DB: TARGETTRACK DBREF 4S24 A 1 194 UNP Q7CGH8 Q7CGH8_YERPE 1 194 SEQADV 4S24 SER A -2 UNP Q7CGH8 EXPRESSION TAG SEQADV 4S24 ASN A -1 UNP Q7CGH8 EXPRESSION TAG SEQADV 4S24 ALA A 0 UNP Q7CGH8 EXPRESSION TAG SEQRES 1 A 197 SER ASN ALA MSE SER ASN VAL LEU ILE ILE ASN ALA MSE SEQRES 2 A 197 LYS GLU PHE ALA HIS SER LYS GLY ALA LEU ASN LEU THR SEQRES 3 A 197 LEU THR ASN VAL ALA ALA ASP PHE LEU ARG GLU SER GLY SEQRES 4 A 197 HIS GLN VAL LYS ILE THR THR VAL ASP GLN GLY TYR ASP SEQRES 5 A 197 ILE GLU SER GLU ILE GLU ASN TYR LEU TRP ALA ASP THR SEQRES 6 A 197 ILE ILE TYR GLN MSE PRO ALA TRP TRP MSE GLY GLU PRO SEQRES 7 A 197 TRP ILE LEU LYS LYS TYR ILE ASP GLU VAL PHE THR ASP SEQRES 8 A 197 GLY HIS GLY ARG LEU TYR GLN SER ASP GLY ARG THR ARG SEQRES 9 A 197 SER ASP ALA THR LYS GLY TYR GLY SER GLY GLY LEU ILE SEQRES 10 A 197 GLN GLY LYS THR TYR MSE LEU SER VAL THR TRP ASN ALA SEQRES 11 A 197 PRO ARG GLU ALA PHE THR ASP PRO GLU GLN PHE PHE HIS SEQRES 12 A 197 GLY VAL GLY VAL ASP GLY VAL TYR LEU PRO PHE HIS LYS SEQRES 13 A 197 ALA ASN GLN PHE LEU GLY MSE LYS PRO LEU PRO THR PHE SEQRES 14 A 197 MSE CYS ASN ASP VAL ILE LYS GLN PRO ASP ILE GLU GLY SEQRES 15 A 197 ASP ILE ALA ARG TYR ARG GLN HIS LEU ALA GLU ASN VAL SEQRES 16 A 197 ASN SER MODRES 4S24 MSE A 1 MET SELENOMETHIONINE MODRES 4S24 MSE A 10 MET SELENOMETHIONINE MODRES 4S24 MSE A 67 MET SELENOMETHIONINE MODRES 4S24 MSE A 72 MET SELENOMETHIONINE MODRES 4S24 MSE A 120 MET SELENOMETHIONINE MODRES 4S24 MSE A 160 MET SELENOMETHIONINE MODRES 4S24 MSE A 167 MET SELENOMETHIONINE HET MSE A 1 8 HET MSE A 10 8 HET MSE A 67 16 HET MSE A 72 8 HET MSE A 120 8 HET MSE A 160 8 HET MSE A 167 8 HET SO4 A 201 5 HET PGE A 202 10 HET PEG A 203 7 HET PEG A 204 11 HET 1PE A 205 16 HETNAM MSE SELENOMETHIONINE HETNAM SO4 SULFATE ION HETNAM PGE TRIETHYLENE GLYCOL HETNAM PEG DI(HYDROXYETHYL)ETHER HETNAM 1PE PENTAETHYLENE GLYCOL HETSYN 1PE PEG400 FORMUL 1 MSE 7(C5 H11 N O2 SE) FORMUL 2 SO4 O4 S 2- FORMUL 3 PGE C6 H14 O4 FORMUL 4 PEG 2(C4 H10 O3) FORMUL 6 1PE C10 H22 O6 FORMUL 7 HOH *175(H2 O) HELIX 1 1 ALA A 19 SER A 35 1 17 HELIX 2 2 ASP A 45 GLY A 47 5 3 HELIX 3 3 ASP A 49 ALA A 60 1 12 HELIX 4 4 PRO A 75 PHE A 86 1 12 HELIX 5 5 THR A 87 HIS A 90 5 4 HELIX 6 6 ARG A 129 ASP A 134 1 6 HELIX 7 7 VAL A 142 TYR A 148 1 7 HELIX 8 8 TYR A 148 LEU A 158 1 11 HELIX 9 9 ASP A 176 VAL A 192 1 17 SHEET 1 A 5 GLN A 38 THR A 43 0 SHEET 2 A 5 ASN A 3 ASN A 8 1 N ASN A 8 O THR A 42 SHEET 3 A 5 THR A 62 PRO A 68 1 O ILE A 64 N ILE A 7 SHEET 4 A 5 THR A 118 THR A 124 1 O SER A 122 N TYR A 65 SHEET 5 A 5 LYS A 161 PRO A 162 1 O LYS A 161 N TYR A 119 SHEET 1 B 5 GLN A 38 THR A 43 0 SHEET 2 B 5 ASN A 3 ASN A 8 1 N ASN A 8 O THR A 42 SHEET 3 B 5 THR A 62 PRO A 68 1 O ILE A 64 N ILE A 7 SHEET 4 B 5 THR A 118 THR A 124 1 O SER A 122 N TYR A 65 SHEET 5 B 5 PHE A 166 CYS A 168 1 O PHE A 166 N LEU A 121 LINK C ALA A 0 N MSE A 1 1555 1555 1.33 LINK C MSE A 1 N SER A 2 1555 1555 1.32 LINK C ALA A 9 N MSE A 10 1555 1555 1.33 LINK C MSE A 10 N LYS A 11 1555 1555 1.33 LINK C GLN A 66 N AMSE A 67 1555 1555 1.33 LINK C GLN A 66 N BMSE A 67 1555 1555 1.32 LINK C AMSE A 67 N PRO A 68 1555 1555 1.35 LINK C BMSE A 67 N PRO A 68 1555 1555 1.33 LINK C TRP A 71 N MSE A 72 1555 1555 1.34 LINK C MSE A 72 N GLY A 73 1555 1555 1.32 LINK C TYR A 119 N MSE A 120 1555 1555 1.32 LINK C MSE A 120 N LEU A 121 1555 1555 1.33 LINK C GLY A 159 N MSE A 160 1555 1555 1.34 LINK C MSE A 160 N LYS A 161 1555 1555 1.33 LINK C PHE A 166 N MSE A 167 1555 1555 1.32 LINK C MSE A 167 N CYS A 168 1555 1555 1.33 SITE 1 AC1 6 LYS A 17 GLY A 18 ALA A 19 LEU A 20 SITE 2 AC1 6 ASN A 21 HOH A 337 SITE 1 AC2 4 LYS A 40 SER A 52 ASN A 56 HOH A 462 SITE 1 AC3 5 LYS A 17 ASP A 145 PRO A 162 LEU A 163 SITE 2 AC3 5 PRO A 164 SITE 1 AC4 3 MSE A 10 GLN A 46 HOH A 373 SITE 1 AC5 10 ALA A 69 TRP A 71 MSE A 72 TYR A 94 SITE 2 AC5 10 TYR A 108 TRP A 125 PHE A 157 HOH A 326 SITE 3 AC5 10 HOH A 415 HOH A 464 CRYST1 72.046 72.046 166.766 90.00 90.00 120.00 P 61 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013880 0.008014 0.000000 0.00000 SCALE2 0.000000 0.016027 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005996 0.00000