data_4S2Y # _entry.id 4S2Y # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.379 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI NDB NA3355 ? ? RCSB RCSB088113 ? ? PDB 4S2Y pdb_00004s2y 10.2210/pdb4s2y/pdb WWPDB D_1000088113 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 4S2V . unspecified PDB 4S2W . unspecified PDB 4S2X . unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4S2Y _pdbx_database_status.recvd_initial_deposition_date 2015-01-23 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Vasilyev, N.' 1 'Serganov, A.' 2 # _citation.id primary _citation.title ;Structures of RNA Complexes with the Escherichia coli RNA Pyrophosphohydrolase RppH Unveil the Basis for Specific 5'-End-dependent mRNA Decay. ; _citation.journal_abbrev J.Biol.Chem. _citation.journal_volume 290 _citation.page_first 9487 _citation.page_last 9499 _citation.year 2015 _citation.journal_id_ASTM JBCHA3 _citation.country US _citation.journal_id_ISSN 0021-9258 _citation.journal_id_CSD 0071 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 25657011 _citation.pdbx_database_id_DOI 10.1074/jbc.M114.634824 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Vasilyev, N.' 1 ? primary 'Serganov, A.' 2 ? # _cell.entry_id 4S2Y _cell.length_a 79.631 _cell.length_b 36.484 _cell.length_c 58.073 _cell.angle_alpha 90.00 _cell.angle_beta 102.30 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4S2Y _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'RNA pyrophosphohydrolase' 18965.773 1 3.6.1.- 'Q159A, E160A' ? ? 2 polymer syn ;RNA (5'-R(*(APC)*GP*U)-3') ; 1093.607 1 ? ? ? ? 3 non-polymer syn 'MAGNESIUM ION' 24.305 3 ? ? ? ? 4 non-polymer syn 'CHLORIDE ION' 35.453 1 ? ? ? ? 5 non-polymer syn 'SULFATE ION' 96.063 1 ? ? ? ? 6 water nat water 18.015 119 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name '(Di)nucleoside polyphosphate hydrolase, Ap5A pyrophosphatase' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;SMIDDDGYRPNVGIVICNRQGQVMWARRFGQHSWQFPQGGINPGESAEQAMYRELFEEVGLSRKDVRILASTRNWLRYKL PKRLVRWDTKPVCIGQKQKWFLLQLVSGDAEINMQTSSTPEFDGWRWVSYWYPVRQVVSFKRDVYRRVMKEFASVVMSLA A ; ;SMIDDDGYRPNVGIVICNRQGQVMWARRFGQHSWQFPQGGINPGESAEQAMYRELFEEVGLSRKDVRILASTRNWLRYKL PKRLVRWDTKPVCIGQKQKWFLLQLVSGDAEINMQTSSTPEFDGWRWVSYWYPVRQVVSFKRDVYRRVMKEFASVVMSLA A ; A ? 2 polyribonucleotide no yes '(APC)GU' XGU B ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 MET n 1 3 ILE n 1 4 ASP n 1 5 ASP n 1 6 ASP n 1 7 GLY n 1 8 TYR n 1 9 ARG n 1 10 PRO n 1 11 ASN n 1 12 VAL n 1 13 GLY n 1 14 ILE n 1 15 VAL n 1 16 ILE n 1 17 CYS n 1 18 ASN n 1 19 ARG n 1 20 GLN n 1 21 GLY n 1 22 GLN n 1 23 VAL n 1 24 MET n 1 25 TRP n 1 26 ALA n 1 27 ARG n 1 28 ARG n 1 29 PHE n 1 30 GLY n 1 31 GLN n 1 32 HIS n 1 33 SER n 1 34 TRP n 1 35 GLN n 1 36 PHE n 1 37 PRO n 1 38 GLN n 1 39 GLY n 1 40 GLY n 1 41 ILE n 1 42 ASN n 1 43 PRO n 1 44 GLY n 1 45 GLU n 1 46 SER n 1 47 ALA n 1 48 GLU n 1 49 GLN n 1 50 ALA n 1 51 MET n 1 52 TYR n 1 53 ARG n 1 54 GLU n 1 55 LEU n 1 56 PHE n 1 57 GLU n 1 58 GLU n 1 59 VAL n 1 60 GLY n 1 61 LEU n 1 62 SER n 1 63 ARG n 1 64 LYS n 1 65 ASP n 1 66 VAL n 1 67 ARG n 1 68 ILE n 1 69 LEU n 1 70 ALA n 1 71 SER n 1 72 THR n 1 73 ARG n 1 74 ASN n 1 75 TRP n 1 76 LEU n 1 77 ARG n 1 78 TYR n 1 79 LYS n 1 80 LEU n 1 81 PRO n 1 82 LYS n 1 83 ARG n 1 84 LEU n 1 85 VAL n 1 86 ARG n 1 87 TRP n 1 88 ASP n 1 89 THR n 1 90 LYS n 1 91 PRO n 1 92 VAL n 1 93 CYS n 1 94 ILE n 1 95 GLY n 1 96 GLN n 1 97 LYS n 1 98 GLN n 1 99 LYS n 1 100 TRP n 1 101 PHE n 1 102 LEU n 1 103 LEU n 1 104 GLN n 1 105 LEU n 1 106 VAL n 1 107 SER n 1 108 GLY n 1 109 ASP n 1 110 ALA n 1 111 GLU n 1 112 ILE n 1 113 ASN n 1 114 MET n 1 115 GLN n 1 116 THR n 1 117 SER n 1 118 SER n 1 119 THR n 1 120 PRO n 1 121 GLU n 1 122 PHE n 1 123 ASP n 1 124 GLY n 1 125 TRP n 1 126 ARG n 1 127 TRP n 1 128 VAL n 1 129 SER n 1 130 TYR n 1 131 TRP n 1 132 TYR n 1 133 PRO n 1 134 VAL n 1 135 ARG n 1 136 GLN n 1 137 VAL n 1 138 VAL n 1 139 SER n 1 140 PHE n 1 141 LYS n 1 142 ARG n 1 143 ASP n 1 144 VAL n 1 145 TYR n 1 146 ARG n 1 147 ARG n 1 148 VAL n 1 149 MET n 1 150 LYS n 1 151 GLU n 1 152 PHE n 1 153 ALA n 1 154 SER n 1 155 VAL n 1 156 VAL n 1 157 MET n 1 158 SER n 1 159 LEU n 1 160 ALA n 1 161 ALA n 2 1 APC n 2 2 G n 2 3 U n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'rppH, nudH, ygdP, b2830, JW2798' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain K12 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 83333 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _pdbx_entity_src_syn.entity_id 2 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific ? _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id ? _pdbx_entity_src_syn.details 'Prepared by in vitro transcription' # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP RPPH_ECOLI P0A776 1 ;MIDDDGYRPNVGIVICNRQGQVMWARRFGQHSWQFPQGGINPGESAEQAMYRELFEEVGLSRKDVRILASTRNWLRYKLP KRLVRWDTKPVCIGQKQKWFLLQLVSGDAEINMQTSSTPEFDGWRWVSYWYPVRQVVSFKRDVYRRVMKEFASVVMSLQE ; 1 ? 2 PDB 4S2Y 4S2Y 2 ? ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 4S2Y A 2 ? 161 ? P0A776 1 ? 160 ? 2 161 2 2 4S2Y B 1 ? 3 ? 4S2Y 1 ? 3 ? 1 3 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4S2Y SER A 1 ? UNP P0A776 ? ? 'expression tag' 1 1 1 4S2Y ALA A 160 ? UNP P0A776 GLN 159 'engineered mutation' 160 2 1 4S2Y ALA A 161 ? UNP P0A776 GLU 160 'engineered mutation' 161 3 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 APC non-polymer . 'DIPHOSPHOMETHYLPHOSPHONIC ACID ADENOSYL ESTER' "ALPHA,BETA-METHYLENEADENOSINE-5'-TRIPHOSPHATE" 'C11 H18 N5 O12 P3' 505.208 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CL non-polymer . 'CHLORIDE ION' ? 'Cl -1' 35.453 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 4S2Y _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.05 _exptl_crystal.density_percent_sol 40.13 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 295 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7 _exptl_crystal_grow.pdbx_details ;crystal growth: 0.4 M ammonium sulfate, 12% PEG 3350, 10% glycerol. crystal soaking and cross-linking: 0.02 M sodium acetate pH 5.0, 0.2 sodium sulfate, 15% PEG 3350, 15% glycerol. crystal soaking and cryoprotection: 0.05 M MOPS-Na pH 7.0, 0.025 M magnesium chloride, 15% PEG 3350, 25% pentaerythritol propoxylate 5/4 PO/OH, VAPOR DIFFUSION, HANGING DROP, temperature 295K ; _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type 'RIGAKU RAXIS IV++' _diffrn_detector.pdbx_collection_date 2013-06-09 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5418 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type RIGAKU _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.5418 # _reflns.entry_id 4S2Y _reflns.observed_criterion_sigma_I 1.0 _reflns.observed_criterion_sigma_F 1.0 _reflns.d_resolution_low 20.0 _reflns.d_resolution_high 1.6 _reflns.number_obs 21065 _reflns.number_all 21164 _reflns.percent_possible_obs 96.7 _reflns.pdbx_Rmerge_I_obs 0.050 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 5.4 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 1.60 _reflns_shell.d_res_low 1.70 _reflns_shell.percent_possible_all 90.6 _reflns_shell.Rmerge_I_obs 0.643 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 2.71 _reflns_shell.pdbx_redundancy 5.0 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 3134 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 4S2Y _refine.ls_number_reflns_obs 21062 _refine.ls_number_reflns_all 21062 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.37 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 19.451 _refine.ls_d_res_high 1.600 _refine.ls_percent_reflns_obs 96.85 _refine.ls_R_factor_obs 0.1735 _refine.ls_R_factor_all 0.1735 _refine.ls_R_factor_R_work 0.1721 _refine.ls_R_factor_R_free 0.1985 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.00 _refine.ls_number_reflns_R_free 1054 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model 'PDB ENTRY 4S2W' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.18 _refine.pdbx_overall_phase_error 22.31 _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1262 _refine_hist.pdbx_number_atoms_nucleic_acid 44 _refine_hist.pdbx_number_atoms_ligand 9 _refine_hist.number_atoms_solvent 119 _refine_hist.number_atoms_total 1434 _refine_hist.d_res_high 1.600 _refine_hist.d_res_low 19.451 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id f_bond_d 0.007 ? ? 1429 ? 'X-RAY DIFFRACTION' f_angle_d 1.016 ? ? 1949 ? 'X-RAY DIFFRACTION' f_dihedral_angle_d 18.616 ? ? 534 ? 'X-RAY DIFFRACTION' f_chiral_restr 0.046 ? ? 199 ? 'X-RAY DIFFRACTION' f_plane_restr 0.005 ? ? 241 ? 'X-RAY DIFFRACTION' # loop_ _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.pdbx_refine_id . 1.6003 1.6730 2283 0.2645 90.00 0.3074 . . 120 . . . . 'X-RAY DIFFRACTION' . 1.6730 1.7612 2467 0.2180 96.00 0.2407 . . 130 . . . . 'X-RAY DIFFRACTION' . 1.7612 1.8715 2451 0.2023 96.00 0.2561 . . 129 . . . . 'X-RAY DIFFRACTION' . 1.8715 2.0158 2487 0.1837 97.00 0.2392 . . 131 . . . . 'X-RAY DIFFRACTION' . 2.0158 2.2184 2521 0.1658 98.00 0.1885 . . 133 . . . . 'X-RAY DIFFRACTION' . 2.2184 2.5388 2552 0.1763 99.00 0.2222 . . 134 . . . . 'X-RAY DIFFRACTION' . 2.5388 3.1964 2581 0.1726 99.00 0.1737 . . 136 . . . . 'X-RAY DIFFRACTION' . 3.1964 19.4524 2666 0.1508 100.00 0.1756 . . 141 . . . . 'X-RAY DIFFRACTION' # _struct.entry_id 4S2Y _struct.title 'Structure of E. coli RppH bound to RNA and three magnesium ions' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4S2Y _struct_keywords.pdbx_keywords hydrolase/RNA _struct_keywords.text 'Nudix hydrolase, RNA pyrophosphohydrolase, hydrolase-RNA complex' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? E N N 4 ? F N N 5 ? G N N 3 ? H N N 6 ? I N N 6 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 46 ? GLY A 60 ? SER A 46 GLY A 60 1 ? 15 HELX_P HELX_P2 2 SER A 62 ? LYS A 64 ? SER A 62 LYS A 64 5 ? 3 HELX_P HELX_P3 3 PRO A 81 ? VAL A 85 ? PRO A 81 VAL A 85 5 ? 5 HELX_P HELX_P4 4 GLY A 108 ? ILE A 112 ? GLY A 108 ILE A 112 5 ? 5 HELX_P HELX_P5 5 TYR A 132 ? VAL A 137 ? TYR A 132 VAL A 137 1 ? 6 HELX_P HELX_P6 6 VAL A 138 ? PHE A 140 ? VAL A 138 PHE A 140 5 ? 3 HELX_P HELX_P7 7 LYS A 141 ? ALA A 161 ? LYS A 141 ALA A 161 1 ? 21 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale one ? B APC 1 "O3'" ? ? ? 1_555 B G 2 P ? ? B APC 1 B G 2 1_555 ? ? ? ? ? ? ? 1.606 ? ? metalc1 metalc ? ? A GLN 38 O ? ? ? 1_555 D MG . MG ? ? A GLN 38 A MG 202 1_555 ? ? ? ? ? ? ? 2.020 ? ? metalc2 metalc ? ? A GLU 54 OE1 ? ? ? 1_555 C MG . MG ? ? A GLU 54 A MG 201 1_555 ? ? ? ? ? ? ? 2.049 ? ? metalc3 metalc ? ? A GLU 54 OE2 ? ? ? 1_555 G MG . MG ? ? A GLU 54 B MG 101 1_555 ? ? ? ? ? ? ? 2.103 ? ? metalc4 metalc ? ? A GLU 58 OE2 ? ? ? 1_555 C MG . MG ? ? A GLU 58 A MG 201 1_555 ? ? ? ? ? ? ? 2.128 ? ? metalc5 metalc ? ? A GLU 58 OE2 ? ? ? 1_555 D MG . MG ? ? A GLU 58 A MG 202 1_555 ? ? ? ? ? ? ? 2.047 ? ? metalc6 metalc ? ? A GLU 121 OE1 ? ? ? 1_555 C MG . MG ? ? A GLU 121 A MG 201 1_555 ? ? ? ? ? ? ? 2.145 ? ? metalc7 metalc ? ? A GLU 121 OE2 ? ? ? 1_555 D MG . MG ? ? A GLU 121 A MG 202 1_555 ? ? ? ? ? ? ? 2.032 ? ? metalc8 metalc ? ? C MG . MG ? ? ? 1_555 H HOH . O ? ? A MG 201 A HOH 308 1_555 ? ? ? ? ? ? ? 2.092 ? ? metalc9 metalc ? ? C MG . MG ? ? ? 1_555 B APC 1 O1B ? ? A MG 201 B APC 1 1_555 ? ? ? ? ? ? ? 2.306 ? ? metalc10 metalc ? ? C MG . MG ? ? ? 1_555 I HOH . O ? ? A MG 201 B HOH 201 1_555 ? ? ? ? ? ? ? 2.204 ? ? metalc11 metalc ? ? D MG . MG ? ? ? 1_555 H HOH . O ? ? A MG 202 A HOH 310 1_555 ? ? ? ? ? ? ? 2.129 ? ? metalc12 metalc ? ? D MG . MG ? ? ? 1_555 B APC 1 O1B ? ? A MG 202 B APC 1 1_555 ? ? ? ? ? ? ? 1.916 ? ? metalc13 metalc ? ? D MG . MG ? ? ? 1_555 B APC 1 O2A ? ? A MG 202 B APC 1 1_555 ? ? ? ? ? ? ? 2.026 ? ? metalc14 metalc ? ? H HOH . O ? ? ? 1_555 G MG . MG ? ? A HOH 314 B MG 101 1_555 ? ? ? ? ? ? ? 2.116 ? ? metalc15 metalc ? ? H HOH . O ? ? ? 1_555 G MG . MG ? ? A HOH 316 B MG 101 1_555 ? ? ? ? ? ? ? 1.990 ? ? metalc16 metalc ? ? B APC 1 O2B ? ? ? 1_555 G MG . MG ? ? B APC 1 B MG 101 1_555 ? ? ? ? ? ? ? 2.021 ? ? metalc17 metalc ? ? G MG . MG ? ? ? 1_555 I HOH . O ? ? B MG 101 B HOH 201 1_555 ? ? ? ? ? ? ? 2.044 ? ? metalc18 metalc ? ? G MG . MG ? ? ? 1_555 I HOH . O ? ? B MG 101 B HOH 202 1_555 ? ? ? ? ? ? ? 2.025 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 4 ? B ? 4 ? C ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? parallel A 3 4 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? parallel B 3 4 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 GLN A 38 ? GLY A 40 ? GLN A 38 GLY A 40 A 2 TYR A 8 ? CYS A 17 ? TYR A 8 CYS A 17 A 3 GLY A 95 ? LEU A 105 ? GLY A 95 LEU A 105 A 4 VAL A 66 ? SER A 71 ? VAL A 66 SER A 71 B 1 GLN A 38 ? GLY A 40 ? GLN A 38 GLY A 40 B 2 TYR A 8 ? CYS A 17 ? TYR A 8 CYS A 17 B 3 GLY A 95 ? LEU A 105 ? GLY A 95 LEU A 105 B 4 LEU A 76 ? LYS A 79 ? LEU A 76 LYS A 79 C 1 TRP A 34 ? GLN A 35 ? TRP A 34 GLN A 35 C 2 GLN A 22 ? ARG A 28 ? GLN A 22 ARG A 28 C 3 PHE A 122 ? SER A 129 ? PHE A 122 SER A 129 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O GLY A 39 ? O GLY A 39 N VAL A 12 ? N VAL A 12 A 2 3 N VAL A 15 ? N VAL A 15 O LEU A 103 ? O LEU A 103 A 3 4 O LEU A 102 ? O LEU A 102 N LEU A 69 ? N LEU A 69 B 1 2 O GLY A 39 ? O GLY A 39 N VAL A 12 ? N VAL A 12 B 2 3 N VAL A 15 ? N VAL A 15 O LEU A 103 ? O LEU A 103 B 3 4 O GLN A 98 ? O GLN A 98 N LEU A 76 ? N LEU A 76 C 1 2 O GLN A 35 ? O GLN A 35 N ALA A 26 ? N ALA A 26 C 2 3 N ARG A 27 ? N ARG A 27 O ASP A 123 ? O ASP A 123 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A MG 201 ? 8 'BINDING SITE FOR RESIDUE MG A 201' AC2 Software A MG 202 ? 6 'BINDING SITE FOR RESIDUE MG A 202' AC3 Software A CL 203 ? 4 'BINDING SITE FOR RESIDUE CL A 203' AC4 Software A SO4 204 ? 4 'BINDING SITE FOR RESIDUE SO4 A 204' AC5 Software B MG 101 ? 7 'BINDING SITE FOR RESIDUE MG B 101' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 8 GLU A 54 ? GLU A 54 . ? 1_555 ? 2 AC1 8 GLU A 58 ? GLU A 58 . ? 1_555 ? 3 AC1 8 GLU A 121 ? GLU A 121 . ? 1_555 ? 4 AC1 8 MG D . ? MG A 202 . ? 1_555 ? 5 AC1 8 HOH H . ? HOH A 308 . ? 1_555 ? 6 AC1 8 APC B 1 ? APC B 1 . ? 1_555 ? 7 AC1 8 MG G . ? MG B 101 . ? 1_555 ? 8 AC1 8 HOH I . ? HOH B 201 . ? 1_555 ? 9 AC2 6 GLN A 38 ? GLN A 38 . ? 1_555 ? 10 AC2 6 GLU A 58 ? GLU A 58 . ? 1_555 ? 11 AC2 6 GLU A 121 ? GLU A 121 . ? 1_555 ? 12 AC2 6 MG C . ? MG A 201 . ? 1_555 ? 13 AC2 6 HOH H . ? HOH A 310 . ? 1_555 ? 14 AC2 6 APC B 1 ? APC B 1 . ? 1_555 ? 15 AC3 4 ASN A 18 ? ASN A 18 . ? 2_555 ? 16 AC3 4 ARG A 19 ? ARG A 19 . ? 1_555 ? 17 AC3 4 ARG A 19 ? ARG A 19 . ? 2_555 ? 18 AC3 4 GLN A 20 ? GLN A 20 . ? 2_555 ? 19 AC4 4 ALA A 47 ? ALA A 47 . ? 1_555 ? 20 AC4 4 GLU A 48 ? GLU A 48 . ? 1_555 ? 21 AC4 4 LYS A 99 ? LYS A 99 . ? 1_555 ? 22 AC4 4 HOH H . ? HOH A 398 . ? 1_555 ? 23 AC5 7 GLU A 54 ? GLU A 54 . ? 1_555 ? 24 AC5 7 MG C . ? MG A 201 . ? 1_555 ? 25 AC5 7 HOH H . ? HOH A 314 . ? 1_555 ? 26 AC5 7 HOH H . ? HOH A 316 . ? 1_555 ? 27 AC5 7 APC B 1 ? APC B 1 . ? 1_555 ? 28 AC5 7 HOH I . ? HOH B 201 . ? 1_555 ? 29 AC5 7 HOH I . ? HOH B 202 . ? 1_555 ? # _database_PDB_matrix.entry_id 4S2Y _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 4S2Y _atom_sites.fract_transf_matrix[1][1] 0.012558 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.002737 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.027409 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.017624 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CL MG N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 1 ? ? ? A . n A 1 2 MET 2 2 2 MET MET A . n A 1 3 ILE 3 3 3 ILE ILE A . n A 1 4 ASP 4 4 4 ASP ASP A . n A 1 5 ASP 5 5 5 ASP ASP A . n A 1 6 ASP 6 6 6 ASP ASP A . n A 1 7 GLY 7 7 7 GLY GLY A . n A 1 8 TYR 8 8 8 TYR TYR A . n A 1 9 ARG 9 9 9 ARG ARG A . n A 1 10 PRO 10 10 10 PRO PRO A . n A 1 11 ASN 11 11 11 ASN ASN A . n A 1 12 VAL 12 12 12 VAL VAL A . n A 1 13 GLY 13 13 13 GLY GLY A . n A 1 14 ILE 14 14 14 ILE ILE A . n A 1 15 VAL 15 15 15 VAL VAL A . n A 1 16 ILE 16 16 16 ILE ILE A . n A 1 17 CYS 17 17 17 CYS CYS A . n A 1 18 ASN 18 18 18 ASN ASN A . n A 1 19 ARG 19 19 19 ARG ARG A . n A 1 20 GLN 20 20 20 GLN GLN A . n A 1 21 GLY 21 21 21 GLY GLY A . n A 1 22 GLN 22 22 22 GLN GLN A . n A 1 23 VAL 23 23 23 VAL VAL A . n A 1 24 MET 24 24 24 MET MET A . n A 1 25 TRP 25 25 25 TRP TRP A . n A 1 26 ALA 26 26 26 ALA ALA A . n A 1 27 ARG 27 27 27 ARG ARG A . n A 1 28 ARG 28 28 28 ARG ARG A . n A 1 29 PHE 29 29 29 PHE PHE A . n A 1 30 GLY 30 30 30 GLY GLY A . n A 1 31 GLN 31 31 31 GLN GLN A . n A 1 32 HIS 32 32 32 HIS HIS A . n A 1 33 SER 33 33 33 SER SER A . n A 1 34 TRP 34 34 34 TRP TRP A . n A 1 35 GLN 35 35 35 GLN GLN A . n A 1 36 PHE 36 36 36 PHE PHE A . n A 1 37 PRO 37 37 37 PRO PRO A . n A 1 38 GLN 38 38 38 GLN GLN A . n A 1 39 GLY 39 39 39 GLY GLY A . n A 1 40 GLY 40 40 40 GLY GLY A . n A 1 41 ILE 41 41 41 ILE ILE A . n A 1 42 ASN 42 42 42 ASN ASN A . n A 1 43 PRO 43 43 43 PRO PRO A . n A 1 44 GLY 44 44 44 GLY GLY A . n A 1 45 GLU 45 45 45 GLU GLU A . n A 1 46 SER 46 46 46 SER SER A . n A 1 47 ALA 47 47 47 ALA ALA A . n A 1 48 GLU 48 48 48 GLU GLU A . n A 1 49 GLN 49 49 49 GLN GLN A . n A 1 50 ALA 50 50 50 ALA ALA A . n A 1 51 MET 51 51 51 MET MET A . n A 1 52 TYR 52 52 52 TYR TYR A . n A 1 53 ARG 53 53 53 ARG ARG A . n A 1 54 GLU 54 54 54 GLU GLU A . n A 1 55 LEU 55 55 55 LEU LEU A . n A 1 56 PHE 56 56 56 PHE PHE A . n A 1 57 GLU 57 57 57 GLU GLU A . n A 1 58 GLU 58 58 58 GLU GLU A . n A 1 59 VAL 59 59 59 VAL VAL A . n A 1 60 GLY 60 60 60 GLY GLY A . n A 1 61 LEU 61 61 61 LEU LEU A . n A 1 62 SER 62 62 62 SER SER A . n A 1 63 ARG 63 63 63 ARG ARG A . n A 1 64 LYS 64 64 64 LYS LYS A . n A 1 65 ASP 65 65 65 ASP ASP A . n A 1 66 VAL 66 66 66 VAL VAL A . n A 1 67 ARG 67 67 67 ARG ARG A . n A 1 68 ILE 68 68 68 ILE ILE A . n A 1 69 LEU 69 69 69 LEU LEU A . n A 1 70 ALA 70 70 70 ALA ALA A . n A 1 71 SER 71 71 71 SER SER A . n A 1 72 THR 72 72 72 THR THR A . n A 1 73 ARG 73 73 73 ARG ARG A . n A 1 74 ASN 74 74 74 ASN ASN A . n A 1 75 TRP 75 75 75 TRP TRP A . n A 1 76 LEU 76 76 76 LEU LEU A . n A 1 77 ARG 77 77 77 ARG ARG A . n A 1 78 TYR 78 78 78 TYR TYR A . n A 1 79 LYS 79 79 79 LYS LYS A . n A 1 80 LEU 80 80 80 LEU LEU A . n A 1 81 PRO 81 81 81 PRO PRO A . n A 1 82 LYS 82 82 82 LYS LYS A . n A 1 83 ARG 83 83 83 ARG ARG A . n A 1 84 LEU 84 84 84 LEU LEU A . n A 1 85 VAL 85 85 85 VAL VAL A . n A 1 86 ARG 86 86 86 ARG ARG A . n A 1 87 TRP 87 87 ? ? ? A . n A 1 88 ASP 88 88 ? ? ? A . n A 1 89 THR 89 89 ? ? ? A . n A 1 90 LYS 90 90 ? ? ? A . n A 1 91 PRO 91 91 ? ? ? A . n A 1 92 VAL 92 92 92 VAL VAL A . n A 1 93 CYS 93 93 93 CYS CYS A . n A 1 94 ILE 94 94 94 ILE ILE A . n A 1 95 GLY 95 95 95 GLY GLY A . n A 1 96 GLN 96 96 96 GLN GLN A . n A 1 97 LYS 97 97 97 LYS LYS A . n A 1 98 GLN 98 98 98 GLN GLN A . n A 1 99 LYS 99 99 99 LYS LYS A . n A 1 100 TRP 100 100 100 TRP TRP A . n A 1 101 PHE 101 101 101 PHE PHE A . n A 1 102 LEU 102 102 102 LEU LEU A . n A 1 103 LEU 103 103 103 LEU LEU A . n A 1 104 GLN 104 104 104 GLN GLN A . n A 1 105 LEU 105 105 105 LEU LEU A . n A 1 106 VAL 106 106 106 VAL VAL A . n A 1 107 SER 107 107 107 SER SER A . n A 1 108 GLY 108 108 108 GLY GLY A . n A 1 109 ASP 109 109 109 ASP ASP A . n A 1 110 ALA 110 110 110 ALA ALA A . n A 1 111 GLU 111 111 111 GLU GLU A . n A 1 112 ILE 112 112 112 ILE ILE A . n A 1 113 ASN 113 113 113 ASN ASN A . n A 1 114 MET 114 114 114 MET MET A . n A 1 115 GLN 115 115 115 GLN GLN A . n A 1 116 THR 116 116 116 THR THR A . n A 1 117 SER 117 117 117 SER SER A . n A 1 118 SER 118 118 118 SER SER A . n A 1 119 THR 119 119 119 THR THR A . n A 1 120 PRO 120 120 120 PRO PRO A . n A 1 121 GLU 121 121 121 GLU GLU A . n A 1 122 PHE 122 122 122 PHE PHE A . n A 1 123 ASP 123 123 123 ASP ASP A . n A 1 124 GLY 124 124 124 GLY GLY A . n A 1 125 TRP 125 125 125 TRP TRP A . n A 1 126 ARG 126 126 126 ARG ARG A . n A 1 127 TRP 127 127 127 TRP TRP A . n A 1 128 VAL 128 128 128 VAL VAL A . n A 1 129 SER 129 129 129 SER SER A . n A 1 130 TYR 130 130 130 TYR TYR A . n A 1 131 TRP 131 131 131 TRP TRP A . n A 1 132 TYR 132 132 132 TYR TYR A . n A 1 133 PRO 133 133 133 PRO PRO A . n A 1 134 VAL 134 134 134 VAL VAL A . n A 1 135 ARG 135 135 135 ARG ARG A . n A 1 136 GLN 136 136 136 GLN GLN A . n A 1 137 VAL 137 137 137 VAL VAL A . n A 1 138 VAL 138 138 138 VAL VAL A . n A 1 139 SER 139 139 139 SER SER A . n A 1 140 PHE 140 140 140 PHE PHE A . n A 1 141 LYS 141 141 141 LYS LYS A . n A 1 142 ARG 142 142 142 ARG ARG A . n A 1 143 ASP 143 143 143 ASP ASP A . n A 1 144 VAL 144 144 144 VAL VAL A . n A 1 145 TYR 145 145 145 TYR TYR A . n A 1 146 ARG 146 146 146 ARG ARG A . n A 1 147 ARG 147 147 147 ARG ARG A . n A 1 148 VAL 148 148 148 VAL VAL A . n A 1 149 MET 149 149 149 MET MET A . n A 1 150 LYS 150 150 150 LYS LYS A . n A 1 151 GLU 151 151 151 GLU GLU A . n A 1 152 PHE 152 152 152 PHE PHE A . n A 1 153 ALA 153 153 153 ALA ALA A . n A 1 154 SER 154 154 154 SER SER A . n A 1 155 VAL 155 155 155 VAL VAL A . n A 1 156 VAL 156 156 156 VAL VAL A . n A 1 157 MET 157 157 157 MET MET A . n A 1 158 SER 158 158 158 SER SER A . n A 1 159 LEU 159 159 159 LEU LEU A . n A 1 160 ALA 160 160 160 ALA ALA A . n A 1 161 ALA 161 161 161 ALA ALA A . n B 2 1 APC 1 1 1 APC APC B . n B 2 2 G 2 2 2 G G B . n B 2 3 U 3 3 ? ? ? B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 MG 1 201 1 MG MG A . D 3 MG 1 202 2 MG MG A . E 4 CL 1 203 1 CL CL A . F 5 SO4 1 204 1 SO4 SO4 A . G 3 MG 1 101 3 MG MG B . H 6 HOH 1 301 2 HOH HOH A . H 6 HOH 2 302 3 HOH HOH A . H 6 HOH 3 303 4 HOH HOH A . H 6 HOH 4 304 5 HOH HOH A . H 6 HOH 5 305 6 HOH HOH A . H 6 HOH 6 306 7 HOH HOH A . H 6 HOH 7 307 8 HOH HOH A . H 6 HOH 8 308 9 HOH HOH A . H 6 HOH 9 309 10 HOH HOH A . H 6 HOH 10 310 11 HOH HOH A . H 6 HOH 11 311 12 HOH HOH A . H 6 HOH 12 312 13 HOH HOH A . H 6 HOH 13 313 14 HOH HOH A . H 6 HOH 14 314 15 HOH HOH A . H 6 HOH 15 315 16 HOH HOH A . H 6 HOH 16 316 17 HOH HOH A . H 6 HOH 17 317 18 HOH HOH A . H 6 HOH 18 318 19 HOH HOH A . H 6 HOH 19 319 20 HOH HOH A . H 6 HOH 20 320 21 HOH HOH A . H 6 HOH 21 321 23 HOH HOH A . H 6 HOH 22 322 24 HOH HOH A . H 6 HOH 23 323 25 HOH HOH A . H 6 HOH 24 324 26 HOH HOH A . H 6 HOH 25 325 27 HOH HOH A . H 6 HOH 26 326 28 HOH HOH A . H 6 HOH 27 327 29 HOH HOH A . H 6 HOH 28 328 30 HOH HOH A . H 6 HOH 29 329 31 HOH HOH A . H 6 HOH 30 330 32 HOH HOH A . H 6 HOH 31 331 33 HOH HOH A . H 6 HOH 32 332 34 HOH HOH A . H 6 HOH 33 333 35 HOH HOH A . H 6 HOH 34 334 36 HOH HOH A . H 6 HOH 35 335 37 HOH HOH A . H 6 HOH 36 336 38 HOH HOH A . H 6 HOH 37 337 39 HOH HOH A . H 6 HOH 38 338 40 HOH HOH A . H 6 HOH 39 339 41 HOH HOH A . H 6 HOH 40 340 42 HOH HOH A . H 6 HOH 41 341 43 HOH HOH A . H 6 HOH 42 342 44 HOH HOH A . H 6 HOH 43 343 45 HOH HOH A . H 6 HOH 44 344 46 HOH HOH A . H 6 HOH 45 345 47 HOH HOH A . H 6 HOH 46 346 48 HOH HOH A . H 6 HOH 47 347 49 HOH HOH A . H 6 HOH 48 348 50 HOH HOH A . H 6 HOH 49 349 51 HOH HOH A . H 6 HOH 50 350 52 HOH HOH A . H 6 HOH 51 351 53 HOH HOH A . H 6 HOH 52 352 54 HOH HOH A . H 6 HOH 53 353 55 HOH HOH A . H 6 HOH 54 354 56 HOH HOH A . H 6 HOH 55 355 57 HOH HOH A . H 6 HOH 56 356 58 HOH HOH A . H 6 HOH 57 357 59 HOH HOH A . H 6 HOH 58 358 60 HOH HOH A . H 6 HOH 59 359 61 HOH HOH A . H 6 HOH 60 360 62 HOH HOH A . H 6 HOH 61 361 63 HOH HOH A . H 6 HOH 62 362 64 HOH HOH A . H 6 HOH 63 363 65 HOH HOH A . H 6 HOH 64 364 66 HOH HOH A . H 6 HOH 65 365 67 HOH HOH A . H 6 HOH 66 366 68 HOH HOH A . H 6 HOH 67 367 69 HOH HOH A . H 6 HOH 68 368 70 HOH HOH A . H 6 HOH 69 369 71 HOH HOH A . H 6 HOH 70 370 72 HOH HOH A . H 6 HOH 71 371 73 HOH HOH A . H 6 HOH 72 372 75 HOH HOH A . H 6 HOH 73 373 76 HOH HOH A . H 6 HOH 74 374 78 HOH HOH A . H 6 HOH 75 375 79 HOH HOH A . H 6 HOH 76 376 80 HOH HOH A . H 6 HOH 77 377 81 HOH HOH A . H 6 HOH 78 378 82 HOH HOH A . H 6 HOH 79 379 83 HOH HOH A . H 6 HOH 80 380 84 HOH HOH A . H 6 HOH 81 381 85 HOH HOH A . H 6 HOH 82 382 86 HOH HOH A . H 6 HOH 83 383 87 HOH HOH A . H 6 HOH 84 384 88 HOH HOH A . H 6 HOH 85 385 89 HOH HOH A . H 6 HOH 86 386 90 HOH HOH A . H 6 HOH 87 387 91 HOH HOH A . H 6 HOH 88 388 92 HOH HOH A . H 6 HOH 89 389 93 HOH HOH A . H 6 HOH 90 390 94 HOH HOH A . H 6 HOH 91 391 95 HOH HOH A . H 6 HOH 92 392 96 HOH HOH A . H 6 HOH 93 393 97 HOH HOH A . H 6 HOH 94 394 98 HOH HOH A . H 6 HOH 95 395 99 HOH HOH A . H 6 HOH 96 396 100 HOH HOH A . H 6 HOH 97 397 101 HOH HOH A . H 6 HOH 98 398 102 HOH HOH A . H 6 HOH 99 399 103 HOH HOH A . H 6 HOH 100 400 104 HOH HOH A . H 6 HOH 101 401 105 HOH HOH A . H 6 HOH 102 402 106 HOH HOH A . H 6 HOH 103 403 107 HOH HOH A . H 6 HOH 104 404 108 HOH HOH A . H 6 HOH 105 405 109 HOH HOH A . H 6 HOH 106 406 110 HOH HOH A . H 6 HOH 107 407 111 HOH HOH A . H 6 HOH 108 408 112 HOH HOH A . H 6 HOH 109 409 113 HOH HOH A . H 6 HOH 110 410 114 HOH HOH A . H 6 HOH 111 411 115 HOH HOH A . H 6 HOH 112 412 117 HOH HOH A . H 6 HOH 113 413 118 HOH HOH A . H 6 HOH 114 414 119 HOH HOH A . I 6 HOH 1 201 1 HOH HOH B . I 6 HOH 2 202 22 HOH HOH B . I 6 HOH 3 203 74 HOH HOH B . I 6 HOH 4 204 77 HOH HOH B . I 6 HOH 5 205 116 HOH HOH B . # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_and_software_defined_assembly PISA dimeric 2 2 software_defined_assembly PISA tetrameric 4 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,B,C,D,E,F,G,H,I 2 1,2 A,B,C,D,E,F,G,H,I # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 1790 ? 1 MORE -61 ? 1 'SSA (A^2)' 7930 ? 2 'ABSA (A^2)' 4930 ? 2 MORE -130 ? 2 'SSA (A^2)' 14510 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 2_555 -x,y,-z -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O ? A GLN 38 ? A GLN 38 ? 1_555 MG ? D MG . ? A MG 202 ? 1_555 OE2 ? A GLU 58 ? A GLU 58 ? 1_555 93.2 ? 2 O ? A GLN 38 ? A GLN 38 ? 1_555 MG ? D MG . ? A MG 202 ? 1_555 OE2 ? A GLU 121 ? A GLU 121 ? 1_555 173.0 ? 3 OE2 ? A GLU 58 ? A GLU 58 ? 1_555 MG ? D MG . ? A MG 202 ? 1_555 OE2 ? A GLU 121 ? A GLU 121 ? 1_555 85.9 ? 4 O ? A GLN 38 ? A GLN 38 ? 1_555 MG ? D MG . ? A MG 202 ? 1_555 O ? H HOH . ? A HOH 310 ? 1_555 89.0 ? 5 OE2 ? A GLU 58 ? A GLU 58 ? 1_555 MG ? D MG . ? A MG 202 ? 1_555 O ? H HOH . ? A HOH 310 ? 1_555 95.7 ? 6 OE2 ? A GLU 121 ? A GLU 121 ? 1_555 MG ? D MG . ? A MG 202 ? 1_555 O ? H HOH . ? A HOH 310 ? 1_555 84.2 ? 7 O ? A GLN 38 ? A GLN 38 ? 1_555 MG ? D MG . ? A MG 202 ? 1_555 O1B ? B APC 1 ? B APC 1 ? 1_555 92.7 ? 8 OE2 ? A GLU 58 ? A GLU 58 ? 1_555 MG ? D MG . ? A MG 202 ? 1_555 O1B ? B APC 1 ? B APC 1 ? 1_555 87.8 ? 9 OE2 ? A GLU 121 ? A GLU 121 ? 1_555 MG ? D MG . ? A MG 202 ? 1_555 O1B ? B APC 1 ? B APC 1 ? 1_555 94.2 ? 10 O ? H HOH . ? A HOH 310 ? 1_555 MG ? D MG . ? A MG 202 ? 1_555 O1B ? B APC 1 ? B APC 1 ? 1_555 176.0 ? 11 O ? A GLN 38 ? A GLN 38 ? 1_555 MG ? D MG . ? A MG 202 ? 1_555 O2A ? B APC 1 ? B APC 1 ? 1_555 91.5 ? 12 OE2 ? A GLU 58 ? A GLU 58 ? 1_555 MG ? D MG . ? A MG 202 ? 1_555 O2A ? B APC 1 ? B APC 1 ? 1_555 169.0 ? 13 OE2 ? A GLU 121 ? A GLU 121 ? 1_555 MG ? D MG . ? A MG 202 ? 1_555 O2A ? B APC 1 ? B APC 1 ? 1_555 90.6 ? 14 O ? H HOH . ? A HOH 310 ? 1_555 MG ? D MG . ? A MG 202 ? 1_555 O2A ? B APC 1 ? B APC 1 ? 1_555 94.4 ? 15 O1B ? B APC 1 ? B APC 1 ? 1_555 MG ? D MG . ? A MG 202 ? 1_555 O2A ? B APC 1 ? B APC 1 ? 1_555 82.0 ? 16 OE1 ? A GLU 54 ? A GLU 54 ? 1_555 MG ? C MG . ? A MG 201 ? 1_555 OE2 ? A GLU 58 ? A GLU 58 ? 1_555 88.1 ? 17 OE1 ? A GLU 54 ? A GLU 54 ? 1_555 MG ? C MG . ? A MG 201 ? 1_555 OE1 ? A GLU 121 ? A GLU 121 ? 1_555 169.3 ? 18 OE2 ? A GLU 58 ? A GLU 58 ? 1_555 MG ? C MG . ? A MG 201 ? 1_555 OE1 ? A GLU 121 ? A GLU 121 ? 1_555 84.8 ? 19 OE1 ? A GLU 54 ? A GLU 54 ? 1_555 MG ? C MG . ? A MG 201 ? 1_555 O ? H HOH . ? A HOH 308 ? 1_555 89.2 ? 20 OE2 ? A GLU 58 ? A GLU 58 ? 1_555 MG ? C MG . ? A MG 201 ? 1_555 O ? H HOH . ? A HOH 308 ? 1_555 110.5 ? 21 OE1 ? A GLU 121 ? A GLU 121 ? 1_555 MG ? C MG . ? A MG 201 ? 1_555 O ? H HOH . ? A HOH 308 ? 1_555 85.9 ? 22 OE1 ? A GLU 54 ? A GLU 54 ? 1_555 MG ? C MG . ? A MG 201 ? 1_555 O1B ? B APC 1 ? B APC 1 ? 1_555 100.4 ? 23 OE2 ? A GLU 58 ? A GLU 58 ? 1_555 MG ? C MG . ? A MG 201 ? 1_555 O1B ? B APC 1 ? B APC 1 ? 1_555 76.5 ? 24 OE1 ? A GLU 121 ? A GLU 121 ? 1_555 MG ? C MG . ? A MG 201 ? 1_555 O1B ? B APC 1 ? B APC 1 ? 1_555 85.7 ? 25 O ? H HOH . ? A HOH 308 ? 1_555 MG ? C MG . ? A MG 201 ? 1_555 O1B ? B APC 1 ? B APC 1 ? 1_555 168.5 ? 26 OE1 ? A GLU 54 ? A GLU 54 ? 1_555 MG ? C MG . ? A MG 201 ? 1_555 O ? I HOH . ? B HOH 201 ? 1_555 98.7 ? 27 OE2 ? A GLU 58 ? A GLU 58 ? 1_555 MG ? C MG . ? A MG 201 ? 1_555 O ? I HOH . ? B HOH 201 ? 1_555 162.7 ? 28 OE1 ? A GLU 121 ? A GLU 121 ? 1_555 MG ? C MG . ? A MG 201 ? 1_555 O ? I HOH . ? B HOH 201 ? 1_555 90.4 ? 29 O ? H HOH . ? A HOH 308 ? 1_555 MG ? C MG . ? A MG 201 ? 1_555 O ? I HOH . ? B HOH 201 ? 1_555 85.7 ? 30 O1B ? B APC 1 ? B APC 1 ? 1_555 MG ? C MG . ? A MG 201 ? 1_555 O ? I HOH . ? B HOH 201 ? 1_555 86.5 ? 31 OE2 ? A GLU 54 ? A GLU 54 ? 1_555 MG ? G MG . ? B MG 101 ? 1_555 O ? H HOH . ? A HOH 314 ? 1_555 85.3 ? 32 OE2 ? A GLU 54 ? A GLU 54 ? 1_555 MG ? G MG . ? B MG 101 ? 1_555 O ? H HOH . ? A HOH 316 ? 1_555 86.5 ? 33 O ? H HOH . ? A HOH 314 ? 1_555 MG ? G MG . ? B MG 101 ? 1_555 O ? H HOH . ? A HOH 316 ? 1_555 99.9 ? 34 OE2 ? A GLU 54 ? A GLU 54 ? 1_555 MG ? G MG . ? B MG 101 ? 1_555 O2B ? B APC 1 ? B APC 1 ? 1_555 101.9 ? 35 O ? H HOH . ? A HOH 314 ? 1_555 MG ? G MG . ? B MG 101 ? 1_555 O2B ? B APC 1 ? B APC 1 ? 1_555 97.9 ? 36 O ? H HOH . ? A HOH 316 ? 1_555 MG ? G MG . ? B MG 101 ? 1_555 O2B ? B APC 1 ? B APC 1 ? 1_555 161.0 ? 37 OE2 ? A GLU 54 ? A GLU 54 ? 1_555 MG ? G MG . ? B MG 101 ? 1_555 O ? I HOH . ? B HOH 201 ? 1_555 97.0 ? 38 O ? H HOH . ? A HOH 314 ? 1_555 MG ? G MG . ? B MG 101 ? 1_555 O ? I HOH . ? B HOH 201 ? 1_555 177.7 ? 39 O ? H HOH . ? A HOH 316 ? 1_555 MG ? G MG . ? B MG 101 ? 1_555 O ? I HOH . ? B HOH 201 ? 1_555 79.8 ? 40 O2B ? B APC 1 ? B APC 1 ? 1_555 MG ? G MG . ? B MG 101 ? 1_555 O ? I HOH . ? B HOH 201 ? 1_555 82.2 ? 41 OE2 ? A GLU 54 ? A GLU 54 ? 1_555 MG ? G MG . ? B MG 101 ? 1_555 O ? I HOH . ? B HOH 202 ? 1_555 165.0 ? 42 O ? H HOH . ? A HOH 314 ? 1_555 MG ? G MG . ? B MG 101 ? 1_555 O ? I HOH . ? B HOH 202 ? 1_555 84.6 ? 43 O ? H HOH . ? A HOH 316 ? 1_555 MG ? G MG . ? B MG 101 ? 1_555 O ? I HOH . ? B HOH 202 ? 1_555 84.5 ? 44 O2B ? B APC 1 ? B APC 1 ? 1_555 MG ? G MG . ? B MG 101 ? 1_555 O ? I HOH . ? B HOH 202 ? 1_555 90.4 ? 45 O ? I HOH . ? B HOH 201 ? 1_555 MG ? G MG . ? B MG 101 ? 1_555 O ? I HOH . ? B HOH 202 ? 1_555 93.2 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2015-02-11 2 'Structure model' 1 1 2015-02-25 3 'Structure model' 1 2 2015-05-06 4 'Structure model' 1 3 2023-09-20 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Database references' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' 6 4 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 4 4 'Structure model' pdbx_initial_refinement_model 5 4 'Structure model' pdbx_struct_conn_angle 6 4 'Structure model' struct_conn 7 4 'Structure model' struct_conn_type 8 4 'Structure model' struct_ref_seq_dif 9 4 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_asym_id' 4 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 5 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 6 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 7 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 8 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 9 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 10 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_asym_id' 11 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_seq_id' 12 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_asym_id' 13 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_asym_id' 14 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 15 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 16 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 17 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 18 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 19 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 20 4 'Structure model' '_pdbx_struct_conn_angle.value' 21 4 'Structure model' '_struct_conn.conn_type_id' 22 4 'Structure model' '_struct_conn.id' 23 4 'Structure model' '_struct_conn.pdbx_dist_value' 24 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 25 4 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 26 4 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 27 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 28 4 'Structure model' '_struct_conn.ptnr1_label_asym_id' 29 4 'Structure model' '_struct_conn.ptnr1_label_atom_id' 30 4 'Structure model' '_struct_conn.ptnr1_label_comp_id' 31 4 'Structure model' '_struct_conn.ptnr1_label_seq_id' 32 4 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 33 4 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 34 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 35 4 'Structure model' '_struct_conn.ptnr2_label_asym_id' 36 4 'Structure model' '_struct_conn.ptnr2_label_atom_id' 37 4 'Structure model' '_struct_conn.ptnr2_label_comp_id' 38 4 'Structure model' '_struct_conn.ptnr2_label_seq_id' 39 4 'Structure model' '_struct_conn_type.id' 40 4 'Structure model' '_struct_ref_seq_dif.details' 41 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 42 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 43 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] 'X-RAY DIFFRACTION' 1 ? refined 14.7568 -0.4097 11.7030 0.1773 0.1682 0.1406 -0.0125 -0.0124 -0.0074 2.6055 1.9732 2.0301 0.2860 0.0789 -0.3279 0.0288 -0.2974 0.0116 0.2763 -0.0261 -0.1129 -0.1804 0.1570 0.0217 'X-RAY DIFFRACTION' 2 ? refined 25.7226 -0.9705 15.2259 0.3091 0.4699 0.2518 -0.0494 -0.0754 -0.0111 0.0027 0.0440 0.0146 -0.0099 0.0054 -0.0249 -0.0174 -0.0323 0.0553 0.0416 0.0098 -0.0309 0.0170 0.0209 -0.0062 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 'X-RAY DIFFRACTION' 1 1 ? ? ? ? ? ? ? ? ? ;chain 'A' ; 'X-RAY DIFFRACTION' 2 2 ? ? ? ? ? ? ? ? ? ;chain 'B' ; # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal CrystalClear 'data collection' . ? 1 PHENIX 'model building' '(phenix.automr)' ? 2 PHENIX refinement '(phenix.refine: 1.9_1692)' ? 3 XDS 'data reduction' . ? 4 XDS 'data scaling' . ? 5 PHENIX phasing . ? 6 # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 O2 _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 SO4 _pdbx_validate_close_contact.auth_seq_id_1 204 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 O _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 HOH _pdbx_validate_close_contact.auth_seq_id_2 398 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.15 # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id ASN _pdbx_validate_torsion.auth_asym_id A _pdbx_validate_torsion.auth_seq_id 18 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi -117.50 _pdbx_validate_torsion.psi -163.64 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LYS 82 ? CG ? A LYS 82 CG 2 1 Y 1 A LYS 82 ? CD ? A LYS 82 CD 3 1 Y 1 A LYS 82 ? CE ? A LYS 82 CE 4 1 Y 1 A LYS 82 ? NZ ? A LYS 82 NZ 5 1 Y 1 A ARG 83 ? CB ? A ARG 83 CB 6 1 Y 1 A ARG 83 ? CG ? A ARG 83 CG 7 1 Y 1 A ARG 83 ? CD ? A ARG 83 CD 8 1 Y 1 A ARG 83 ? NE ? A ARG 83 NE 9 1 Y 1 A ARG 83 ? CZ ? A ARG 83 CZ 10 1 Y 1 A ARG 83 ? NH1 ? A ARG 83 NH1 11 1 Y 1 A ARG 83 ? NH2 ? A ARG 83 NH2 12 1 Y 1 A ARG 86 ? CG ? A ARG 86 CG 13 1 Y 1 A ARG 86 ? CD ? A ARG 86 CD 14 1 Y 1 A ARG 86 ? NE ? A ARG 86 NE 15 1 Y 1 A ARG 86 ? CZ ? A ARG 86 CZ 16 1 Y 1 A ARG 86 ? NH1 ? A ARG 86 NH1 17 1 Y 1 A ARG 86 ? NH2 ? A ARG 86 NH2 18 1 Y 1 A ARG 135 ? CD ? A ARG 135 CD 19 1 Y 1 A ARG 135 ? NE ? A ARG 135 NE 20 1 Y 1 A ARG 135 ? CZ ? A ARG 135 CZ 21 1 Y 1 A ARG 135 ? NH1 ? A ARG 135 NH1 22 1 Y 1 A ARG 135 ? NH2 ? A ARG 135 NH2 23 1 Y 1 B APC 1 ? N9 ? B APC 1 N9 24 1 Y 1 B APC 1 ? C8 ? B APC 1 C8 25 1 Y 1 B APC 1 ? N7 ? B APC 1 N7 26 1 Y 1 B APC 1 ? C5 ? B APC 1 C5 27 1 Y 1 B APC 1 ? C6 ? B APC 1 C6 28 1 Y 1 B APC 1 ? N6 ? B APC 1 N6 29 1 Y 1 B APC 1 ? N1 ? B APC 1 N1 30 1 Y 1 B APC 1 ? C2 ? B APC 1 C2 31 1 Y 1 B APC 1 ? N3 ? B APC 1 N3 32 1 Y 1 B APC 1 ? C4 ? B APC 1 C4 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A SER 1 ? A SER 1 2 1 Y 1 A TRP 87 ? A TRP 87 3 1 Y 1 A ASP 88 ? A ASP 88 4 1 Y 1 A THR 89 ? A THR 89 5 1 Y 1 A LYS 90 ? A LYS 90 6 1 Y 1 A PRO 91 ? A PRO 91 7 1 Y 1 B U 3 ? B U 3 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 APC PG P N N 14 APC O1G O N N 15 APC O2G O N N 16 APC O3G O N N 17 APC PB P N S 18 APC O1B O N N 19 APC O2B O N N 20 APC O3B O N N 21 APC PA P N R 22 APC O1A O N N 23 APC O2A O N N 24 APC C3A C N N 25 APC "O5'" O N N 26 APC "C5'" C N N 27 APC "C4'" C N R 28 APC "O4'" O N N 29 APC "C3'" C N S 30 APC "O3'" O N N 31 APC "C2'" C N R 32 APC "O2'" O N N 33 APC "C1'" C N R 34 APC N9 N Y N 35 APC C8 C Y N 36 APC N7 N Y N 37 APC C5 C Y N 38 APC C6 C Y N 39 APC N6 N N N 40 APC N1 N Y N 41 APC C2 C Y N 42 APC N3 N Y N 43 APC C4 C Y N 44 APC HOG2 H N N 45 APC HOG3 H N N 46 APC HOB2 H N N 47 APC HOA2 H N N 48 APC H3A1 H N N 49 APC H3A2 H N N 50 APC "H5'1" H N N 51 APC "H5'2" H N N 52 APC "H4'" H N N 53 APC "H3'" H N N 54 APC "HO3'" H N N 55 APC "H2'" H N N 56 APC "HO2'" H N N 57 APC "H1'" H N N 58 APC H8 H N N 59 APC HN61 H N N 60 APC HN62 H N N 61 APC H2 H N N 62 ARG N N N N 63 ARG CA C N S 64 ARG C C N N 65 ARG O O N N 66 ARG CB C N N 67 ARG CG C N N 68 ARG CD C N N 69 ARG NE N N N 70 ARG CZ C N N 71 ARG NH1 N N N 72 ARG NH2 N N N 73 ARG OXT O N N 74 ARG H H N N 75 ARG H2 H N N 76 ARG HA H N N 77 ARG HB2 H N N 78 ARG HB3 H N N 79 ARG HG2 H N N 80 ARG HG3 H N N 81 ARG HD2 H N N 82 ARG HD3 H N N 83 ARG HE H N N 84 ARG HH11 H N N 85 ARG HH12 H N N 86 ARG HH21 H N N 87 ARG HH22 H N N 88 ARG HXT H N N 89 ASN N N N N 90 ASN CA C N S 91 ASN C C N N 92 ASN O O N N 93 ASN CB C N N 94 ASN CG C N N 95 ASN OD1 O N N 96 ASN ND2 N N N 97 ASN OXT O N N 98 ASN H H N N 99 ASN H2 H N N 100 ASN HA H N N 101 ASN HB2 H N N 102 ASN HB3 H N N 103 ASN HD21 H N N 104 ASN HD22 H N N 105 ASN HXT H N N 106 ASP N N N N 107 ASP CA C N S 108 ASP C C N N 109 ASP O O N N 110 ASP CB C N N 111 ASP CG C N N 112 ASP OD1 O N N 113 ASP OD2 O N N 114 ASP OXT O N N 115 ASP H H N N 116 ASP H2 H N N 117 ASP HA H N N 118 ASP HB2 H N N 119 ASP HB3 H N N 120 ASP HD2 H N N 121 ASP HXT H N N 122 CL CL CL N N 123 CYS N N N N 124 CYS CA C N R 125 CYS C C N N 126 CYS O O N N 127 CYS CB C N N 128 CYS SG S N N 129 CYS OXT O N N 130 CYS H H N N 131 CYS H2 H N N 132 CYS HA H N N 133 CYS HB2 H N N 134 CYS HB3 H N N 135 CYS HG H N N 136 CYS HXT H N N 137 G OP3 O N N 138 G P P N N 139 G OP1 O N N 140 G OP2 O N N 141 G "O5'" O N N 142 G "C5'" C N N 143 G "C4'" C N R 144 G "O4'" O N N 145 G "C3'" C N S 146 G "O3'" O N N 147 G "C2'" C N R 148 G "O2'" O N N 149 G "C1'" C N R 150 G N9 N Y N 151 G C8 C Y N 152 G N7 N Y N 153 G C5 C Y N 154 G C6 C N N 155 G O6 O N N 156 G N1 N N N 157 G C2 C N N 158 G N2 N N N 159 G N3 N N N 160 G C4 C Y N 161 G HOP3 H N N 162 G HOP2 H N N 163 G "H5'" H N N 164 G "H5''" H N N 165 G "H4'" H N N 166 G "H3'" H N N 167 G "HO3'" H N N 168 G "H2'" H N N 169 G "HO2'" H N N 170 G "H1'" H N N 171 G H8 H N N 172 G H1 H N N 173 G H21 H N N 174 G H22 H N N 175 GLN N N N N 176 GLN CA C N S 177 GLN C C N N 178 GLN O O N N 179 GLN CB C N N 180 GLN CG C N N 181 GLN CD C N N 182 GLN OE1 O N N 183 GLN NE2 N N N 184 GLN OXT O N N 185 GLN H H N N 186 GLN H2 H N N 187 GLN HA H N N 188 GLN HB2 H N N 189 GLN HB3 H N N 190 GLN HG2 H N N 191 GLN HG3 H N N 192 GLN HE21 H N N 193 GLN HE22 H N N 194 GLN HXT H N N 195 GLU N N N N 196 GLU CA C N S 197 GLU C C N N 198 GLU O O N N 199 GLU CB C N N 200 GLU CG C N N 201 GLU CD C N N 202 GLU OE1 O N N 203 GLU OE2 O N N 204 GLU OXT O N N 205 GLU H H N N 206 GLU H2 H N N 207 GLU HA H N N 208 GLU HB2 H N N 209 GLU HB3 H N N 210 GLU HG2 H N N 211 GLU HG3 H N N 212 GLU HE2 H N N 213 GLU HXT H N N 214 GLY N N N N 215 GLY CA C N N 216 GLY C C N N 217 GLY O O N N 218 GLY OXT O N N 219 GLY H H N N 220 GLY H2 H N N 221 GLY HA2 H N N 222 GLY HA3 H N N 223 GLY HXT H N N 224 HIS N N N N 225 HIS CA C N S 226 HIS C C N N 227 HIS O O N N 228 HIS CB C N N 229 HIS CG C Y N 230 HIS ND1 N Y N 231 HIS CD2 C Y N 232 HIS CE1 C Y N 233 HIS NE2 N Y N 234 HIS OXT O N N 235 HIS H H N N 236 HIS H2 H N N 237 HIS HA H N N 238 HIS HB2 H N N 239 HIS HB3 H N N 240 HIS HD1 H N N 241 HIS HD2 H N N 242 HIS HE1 H N N 243 HIS HE2 H N N 244 HIS HXT H N N 245 HOH O O N N 246 HOH H1 H N N 247 HOH H2 H N N 248 ILE N N N N 249 ILE CA C N S 250 ILE C C N N 251 ILE O O N N 252 ILE CB C N S 253 ILE CG1 C N N 254 ILE CG2 C N N 255 ILE CD1 C N N 256 ILE OXT O N N 257 ILE H H N N 258 ILE H2 H N N 259 ILE HA H N N 260 ILE HB H N N 261 ILE HG12 H N N 262 ILE HG13 H N N 263 ILE HG21 H N N 264 ILE HG22 H N N 265 ILE HG23 H N N 266 ILE HD11 H N N 267 ILE HD12 H N N 268 ILE HD13 H N N 269 ILE HXT H N N 270 LEU N N N N 271 LEU CA C N S 272 LEU C C N N 273 LEU O O N N 274 LEU CB C N N 275 LEU CG C N N 276 LEU CD1 C N N 277 LEU CD2 C N N 278 LEU OXT O N N 279 LEU H H N N 280 LEU H2 H N N 281 LEU HA H N N 282 LEU HB2 H N N 283 LEU HB3 H N N 284 LEU HG H N N 285 LEU HD11 H N N 286 LEU HD12 H N N 287 LEU HD13 H N N 288 LEU HD21 H N N 289 LEU HD22 H N N 290 LEU HD23 H N N 291 LEU HXT H N N 292 LYS N N N N 293 LYS CA C N S 294 LYS C C N N 295 LYS O O N N 296 LYS CB C N N 297 LYS CG C N N 298 LYS CD C N N 299 LYS CE C N N 300 LYS NZ N N N 301 LYS OXT O N N 302 LYS H H N N 303 LYS H2 H N N 304 LYS HA H N N 305 LYS HB2 H N N 306 LYS HB3 H N N 307 LYS HG2 H N N 308 LYS HG3 H N N 309 LYS HD2 H N N 310 LYS HD3 H N N 311 LYS HE2 H N N 312 LYS HE3 H N N 313 LYS HZ1 H N N 314 LYS HZ2 H N N 315 LYS HZ3 H N N 316 LYS HXT H N N 317 MET N N N N 318 MET CA C N S 319 MET C C N N 320 MET O O N N 321 MET CB C N N 322 MET CG C N N 323 MET SD S N N 324 MET CE C N N 325 MET OXT O N N 326 MET H H N N 327 MET H2 H N N 328 MET HA H N N 329 MET HB2 H N N 330 MET HB3 H N N 331 MET HG2 H N N 332 MET HG3 H N N 333 MET HE1 H N N 334 MET HE2 H N N 335 MET HE3 H N N 336 MET HXT H N N 337 MG MG MG N N 338 PHE N N N N 339 PHE CA C N S 340 PHE C C N N 341 PHE O O N N 342 PHE CB C N N 343 PHE CG C Y N 344 PHE CD1 C Y N 345 PHE CD2 C Y N 346 PHE CE1 C Y N 347 PHE CE2 C Y N 348 PHE CZ C Y N 349 PHE OXT O N N 350 PHE H H N N 351 PHE H2 H N N 352 PHE HA H N N 353 PHE HB2 H N N 354 PHE HB3 H N N 355 PHE HD1 H N N 356 PHE HD2 H N N 357 PHE HE1 H N N 358 PHE HE2 H N N 359 PHE HZ H N N 360 PHE HXT H N N 361 PRO N N N N 362 PRO CA C N S 363 PRO C C N N 364 PRO O O N N 365 PRO CB C N N 366 PRO CG C N N 367 PRO CD C N N 368 PRO OXT O N N 369 PRO H H N N 370 PRO HA H N N 371 PRO HB2 H N N 372 PRO HB3 H N N 373 PRO HG2 H N N 374 PRO HG3 H N N 375 PRO HD2 H N N 376 PRO HD3 H N N 377 PRO HXT H N N 378 SER N N N N 379 SER CA C N S 380 SER C C N N 381 SER O O N N 382 SER CB C N N 383 SER OG O N N 384 SER OXT O N N 385 SER H H N N 386 SER H2 H N N 387 SER HA H N N 388 SER HB2 H N N 389 SER HB3 H N N 390 SER HG H N N 391 SER HXT H N N 392 SO4 S S N N 393 SO4 O1 O N N 394 SO4 O2 O N N 395 SO4 O3 O N N 396 SO4 O4 O N N 397 THR N N N N 398 THR CA C N S 399 THR C C N N 400 THR O O N N 401 THR CB C N R 402 THR OG1 O N N 403 THR CG2 C N N 404 THR OXT O N N 405 THR H H N N 406 THR H2 H N N 407 THR HA H N N 408 THR HB H N N 409 THR HG1 H N N 410 THR HG21 H N N 411 THR HG22 H N N 412 THR HG23 H N N 413 THR HXT H N N 414 TRP N N N N 415 TRP CA C N S 416 TRP C C N N 417 TRP O O N N 418 TRP CB C N N 419 TRP CG C Y N 420 TRP CD1 C Y N 421 TRP CD2 C Y N 422 TRP NE1 N Y N 423 TRP CE2 C Y N 424 TRP CE3 C Y N 425 TRP CZ2 C Y N 426 TRP CZ3 C Y N 427 TRP CH2 C Y N 428 TRP OXT O N N 429 TRP H H N N 430 TRP H2 H N N 431 TRP HA H N N 432 TRP HB2 H N N 433 TRP HB3 H N N 434 TRP HD1 H N N 435 TRP HE1 H N N 436 TRP HE3 H N N 437 TRP HZ2 H N N 438 TRP HZ3 H N N 439 TRP HH2 H N N 440 TRP HXT H N N 441 TYR N N N N 442 TYR CA C N S 443 TYR C C N N 444 TYR O O N N 445 TYR CB C N N 446 TYR CG C Y N 447 TYR CD1 C Y N 448 TYR CD2 C Y N 449 TYR CE1 C Y N 450 TYR CE2 C Y N 451 TYR CZ C Y N 452 TYR OH O N N 453 TYR OXT O N N 454 TYR H H N N 455 TYR H2 H N N 456 TYR HA H N N 457 TYR HB2 H N N 458 TYR HB3 H N N 459 TYR HD1 H N N 460 TYR HD2 H N N 461 TYR HE1 H N N 462 TYR HE2 H N N 463 TYR HH H N N 464 TYR HXT H N N 465 U OP3 O N N 466 U P P N N 467 U OP1 O N N 468 U OP2 O N N 469 U "O5'" O N N 470 U "C5'" C N N 471 U "C4'" C N R 472 U "O4'" O N N 473 U "C3'" C N S 474 U "O3'" O N N 475 U "C2'" C N R 476 U "O2'" O N N 477 U "C1'" C N R 478 U N1 N N N 479 U C2 C N N 480 U O2 O N N 481 U N3 N N N 482 U C4 C N N 483 U O4 O N N 484 U C5 C N N 485 U C6 C N N 486 U HOP3 H N N 487 U HOP2 H N N 488 U "H5'" H N N 489 U "H5''" H N N 490 U "H4'" H N N 491 U "H3'" H N N 492 U "HO3'" H N N 493 U "H2'" H N N 494 U "HO2'" H N N 495 U "H1'" H N N 496 U H3 H N N 497 U H5 H N N 498 U H6 H N N 499 VAL N N N N 500 VAL CA C N S 501 VAL C C N N 502 VAL O O N N 503 VAL CB C N N 504 VAL CG1 C N N 505 VAL CG2 C N N 506 VAL OXT O N N 507 VAL H H N N 508 VAL H2 H N N 509 VAL HA H N N 510 VAL HB H N N 511 VAL HG11 H N N 512 VAL HG12 H N N 513 VAL HG13 H N N 514 VAL HG21 H N N 515 VAL HG22 H N N 516 VAL HG23 H N N 517 VAL HXT H N N 518 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 APC PG O1G doub N N 13 APC PG O2G sing N N 14 APC PG O3G sing N N 15 APC PG O3B sing N N 16 APC O2G HOG2 sing N N 17 APC O3G HOG3 sing N N 18 APC PB O1B doub N N 19 APC PB O2B sing N N 20 APC PB O3B sing N N 21 APC PB C3A sing N N 22 APC O2B HOB2 sing N N 23 APC PA O1A doub N N 24 APC PA O2A sing N N 25 APC PA C3A sing N N 26 APC PA "O5'" sing N N 27 APC O2A HOA2 sing N N 28 APC C3A H3A1 sing N N 29 APC C3A H3A2 sing N N 30 APC "O5'" "C5'" sing N N 31 APC "C5'" "C4'" sing N N 32 APC "C5'" "H5'1" sing N N 33 APC "C5'" "H5'2" sing N N 34 APC "C4'" "O4'" sing N N 35 APC "C4'" "C3'" sing N N 36 APC "C4'" "H4'" sing N N 37 APC "O4'" "C1'" sing N N 38 APC "C3'" "O3'" sing N N 39 APC "C3'" "C2'" sing N N 40 APC "C3'" "H3'" sing N N 41 APC "O3'" "HO3'" sing N N 42 APC "C2'" "O2'" sing N N 43 APC "C2'" "C1'" sing N N 44 APC "C2'" "H2'" sing N N 45 APC "O2'" "HO2'" sing N N 46 APC "C1'" N9 sing N N 47 APC "C1'" "H1'" sing N N 48 APC N9 C8 sing Y N 49 APC N9 C4 sing Y N 50 APC C8 N7 doub Y N 51 APC C8 H8 sing N N 52 APC N7 C5 sing Y N 53 APC C5 C6 sing Y N 54 APC C5 C4 doub Y N 55 APC C6 N6 sing N N 56 APC C6 N1 doub Y N 57 APC N6 HN61 sing N N 58 APC N6 HN62 sing N N 59 APC N1 C2 sing Y N 60 APC C2 N3 doub Y N 61 APC C2 H2 sing N N 62 APC N3 C4 sing Y N 63 ARG N CA sing N N 64 ARG N H sing N N 65 ARG N H2 sing N N 66 ARG CA C sing N N 67 ARG CA CB sing N N 68 ARG CA HA sing N N 69 ARG C O doub N N 70 ARG C OXT sing N N 71 ARG CB CG sing N N 72 ARG CB HB2 sing N N 73 ARG CB HB3 sing N N 74 ARG CG CD sing N N 75 ARG CG HG2 sing N N 76 ARG CG HG3 sing N N 77 ARG CD NE sing N N 78 ARG CD HD2 sing N N 79 ARG CD HD3 sing N N 80 ARG NE CZ sing N N 81 ARG NE HE sing N N 82 ARG CZ NH1 sing N N 83 ARG CZ NH2 doub N N 84 ARG NH1 HH11 sing N N 85 ARG NH1 HH12 sing N N 86 ARG NH2 HH21 sing N N 87 ARG NH2 HH22 sing N N 88 ARG OXT HXT sing N N 89 ASN N CA sing N N 90 ASN N H sing N N 91 ASN N H2 sing N N 92 ASN CA C sing N N 93 ASN CA CB sing N N 94 ASN CA HA sing N N 95 ASN C O doub N N 96 ASN C OXT sing N N 97 ASN CB CG sing N N 98 ASN CB HB2 sing N N 99 ASN CB HB3 sing N N 100 ASN CG OD1 doub N N 101 ASN CG ND2 sing N N 102 ASN ND2 HD21 sing N N 103 ASN ND2 HD22 sing N N 104 ASN OXT HXT sing N N 105 ASP N CA sing N N 106 ASP N H sing N N 107 ASP N H2 sing N N 108 ASP CA C sing N N 109 ASP CA CB sing N N 110 ASP CA HA sing N N 111 ASP C O doub N N 112 ASP C OXT sing N N 113 ASP CB CG sing N N 114 ASP CB HB2 sing N N 115 ASP CB HB3 sing N N 116 ASP CG OD1 doub N N 117 ASP CG OD2 sing N N 118 ASP OD2 HD2 sing N N 119 ASP OXT HXT sing N N 120 CYS N CA sing N N 121 CYS N H sing N N 122 CYS N H2 sing N N 123 CYS CA C sing N N 124 CYS CA CB sing N N 125 CYS CA HA sing N N 126 CYS C O doub N N 127 CYS C OXT sing N N 128 CYS CB SG sing N N 129 CYS CB HB2 sing N N 130 CYS CB HB3 sing N N 131 CYS SG HG sing N N 132 CYS OXT HXT sing N N 133 G OP3 P sing N N 134 G OP3 HOP3 sing N N 135 G P OP1 doub N N 136 G P OP2 sing N N 137 G P "O5'" sing N N 138 G OP2 HOP2 sing N N 139 G "O5'" "C5'" sing N N 140 G "C5'" "C4'" sing N N 141 G "C5'" "H5'" sing N N 142 G "C5'" "H5''" sing N N 143 G "C4'" "O4'" sing N N 144 G "C4'" "C3'" sing N N 145 G "C4'" "H4'" sing N N 146 G "O4'" "C1'" sing N N 147 G "C3'" "O3'" sing N N 148 G "C3'" "C2'" sing N N 149 G "C3'" "H3'" sing N N 150 G "O3'" "HO3'" sing N N 151 G "C2'" "O2'" sing N N 152 G "C2'" "C1'" sing N N 153 G "C2'" "H2'" sing N N 154 G "O2'" "HO2'" sing N N 155 G "C1'" N9 sing N N 156 G "C1'" "H1'" sing N N 157 G N9 C8 sing Y N 158 G N9 C4 sing Y N 159 G C8 N7 doub Y N 160 G C8 H8 sing N N 161 G N7 C5 sing Y N 162 G C5 C6 sing N N 163 G C5 C4 doub Y N 164 G C6 O6 doub N N 165 G C6 N1 sing N N 166 G N1 C2 sing N N 167 G N1 H1 sing N N 168 G C2 N2 sing N N 169 G C2 N3 doub N N 170 G N2 H21 sing N N 171 G N2 H22 sing N N 172 G N3 C4 sing N N 173 GLN N CA sing N N 174 GLN N H sing N N 175 GLN N H2 sing N N 176 GLN CA C sing N N 177 GLN CA CB sing N N 178 GLN CA HA sing N N 179 GLN C O doub N N 180 GLN C OXT sing N N 181 GLN CB CG sing N N 182 GLN CB HB2 sing N N 183 GLN CB HB3 sing N N 184 GLN CG CD sing N N 185 GLN CG HG2 sing N N 186 GLN CG HG3 sing N N 187 GLN CD OE1 doub N N 188 GLN CD NE2 sing N N 189 GLN NE2 HE21 sing N N 190 GLN NE2 HE22 sing N N 191 GLN OXT HXT sing N N 192 GLU N CA sing N N 193 GLU N H sing N N 194 GLU N H2 sing N N 195 GLU CA C sing N N 196 GLU CA CB sing N N 197 GLU CA HA sing N N 198 GLU C O doub N N 199 GLU C OXT sing N N 200 GLU CB CG sing N N 201 GLU CB HB2 sing N N 202 GLU CB HB3 sing N N 203 GLU CG CD sing N N 204 GLU CG HG2 sing N N 205 GLU CG HG3 sing N N 206 GLU CD OE1 doub N N 207 GLU CD OE2 sing N N 208 GLU OE2 HE2 sing N N 209 GLU OXT HXT sing N N 210 GLY N CA sing N N 211 GLY N H sing N N 212 GLY N H2 sing N N 213 GLY CA C sing N N 214 GLY CA HA2 sing N N 215 GLY CA HA3 sing N N 216 GLY C O doub N N 217 GLY C OXT sing N N 218 GLY OXT HXT sing N N 219 HIS N CA sing N N 220 HIS N H sing N N 221 HIS N H2 sing N N 222 HIS CA C sing N N 223 HIS CA CB sing N N 224 HIS CA HA sing N N 225 HIS C O doub N N 226 HIS C OXT sing N N 227 HIS CB CG sing N N 228 HIS CB HB2 sing N N 229 HIS CB HB3 sing N N 230 HIS CG ND1 sing Y N 231 HIS CG CD2 doub Y N 232 HIS ND1 CE1 doub Y N 233 HIS ND1 HD1 sing N N 234 HIS CD2 NE2 sing Y N 235 HIS CD2 HD2 sing N N 236 HIS CE1 NE2 sing Y N 237 HIS CE1 HE1 sing N N 238 HIS NE2 HE2 sing N N 239 HIS OXT HXT sing N N 240 HOH O H1 sing N N 241 HOH O H2 sing N N 242 ILE N CA sing N N 243 ILE N H sing N N 244 ILE N H2 sing N N 245 ILE CA C sing N N 246 ILE CA CB sing N N 247 ILE CA HA sing N N 248 ILE C O doub N N 249 ILE C OXT sing N N 250 ILE CB CG1 sing N N 251 ILE CB CG2 sing N N 252 ILE CB HB sing N N 253 ILE CG1 CD1 sing N N 254 ILE CG1 HG12 sing N N 255 ILE CG1 HG13 sing N N 256 ILE CG2 HG21 sing N N 257 ILE CG2 HG22 sing N N 258 ILE CG2 HG23 sing N N 259 ILE CD1 HD11 sing N N 260 ILE CD1 HD12 sing N N 261 ILE CD1 HD13 sing N N 262 ILE OXT HXT sing N N 263 LEU N CA sing N N 264 LEU N H sing N N 265 LEU N H2 sing N N 266 LEU CA C sing N N 267 LEU CA CB sing N N 268 LEU CA HA sing N N 269 LEU C O doub N N 270 LEU C OXT sing N N 271 LEU CB CG sing N N 272 LEU CB HB2 sing N N 273 LEU CB HB3 sing N N 274 LEU CG CD1 sing N N 275 LEU CG CD2 sing N N 276 LEU CG HG sing N N 277 LEU CD1 HD11 sing N N 278 LEU CD1 HD12 sing N N 279 LEU CD1 HD13 sing N N 280 LEU CD2 HD21 sing N N 281 LEU CD2 HD22 sing N N 282 LEU CD2 HD23 sing N N 283 LEU OXT HXT sing N N 284 LYS N CA sing N N 285 LYS N H sing N N 286 LYS N H2 sing N N 287 LYS CA C sing N N 288 LYS CA CB sing N N 289 LYS CA HA sing N N 290 LYS C O doub N N 291 LYS C OXT sing N N 292 LYS CB CG sing N N 293 LYS CB HB2 sing N N 294 LYS CB HB3 sing N N 295 LYS CG CD sing N N 296 LYS CG HG2 sing N N 297 LYS CG HG3 sing N N 298 LYS CD CE sing N N 299 LYS CD HD2 sing N N 300 LYS CD HD3 sing N N 301 LYS CE NZ sing N N 302 LYS CE HE2 sing N N 303 LYS CE HE3 sing N N 304 LYS NZ HZ1 sing N N 305 LYS NZ HZ2 sing N N 306 LYS NZ HZ3 sing N N 307 LYS OXT HXT sing N N 308 MET N CA sing N N 309 MET N H sing N N 310 MET N H2 sing N N 311 MET CA C sing N N 312 MET CA CB sing N N 313 MET CA HA sing N N 314 MET C O doub N N 315 MET C OXT sing N N 316 MET CB CG sing N N 317 MET CB HB2 sing N N 318 MET CB HB3 sing N N 319 MET CG SD sing N N 320 MET CG HG2 sing N N 321 MET CG HG3 sing N N 322 MET SD CE sing N N 323 MET CE HE1 sing N N 324 MET CE HE2 sing N N 325 MET CE HE3 sing N N 326 MET OXT HXT sing N N 327 PHE N CA sing N N 328 PHE N H sing N N 329 PHE N H2 sing N N 330 PHE CA C sing N N 331 PHE CA CB sing N N 332 PHE CA HA sing N N 333 PHE C O doub N N 334 PHE C OXT sing N N 335 PHE CB CG sing N N 336 PHE CB HB2 sing N N 337 PHE CB HB3 sing N N 338 PHE CG CD1 doub Y N 339 PHE CG CD2 sing Y N 340 PHE CD1 CE1 sing Y N 341 PHE CD1 HD1 sing N N 342 PHE CD2 CE2 doub Y N 343 PHE CD2 HD2 sing N N 344 PHE CE1 CZ doub Y N 345 PHE CE1 HE1 sing N N 346 PHE CE2 CZ sing Y N 347 PHE CE2 HE2 sing N N 348 PHE CZ HZ sing N N 349 PHE OXT HXT sing N N 350 PRO N CA sing N N 351 PRO N CD sing N N 352 PRO N H sing N N 353 PRO CA C sing N N 354 PRO CA CB sing N N 355 PRO CA HA sing N N 356 PRO C O doub N N 357 PRO C OXT sing N N 358 PRO CB CG sing N N 359 PRO CB HB2 sing N N 360 PRO CB HB3 sing N N 361 PRO CG CD sing N N 362 PRO CG HG2 sing N N 363 PRO CG HG3 sing N N 364 PRO CD HD2 sing N N 365 PRO CD HD3 sing N N 366 PRO OXT HXT sing N N 367 SER N CA sing N N 368 SER N H sing N N 369 SER N H2 sing N N 370 SER CA C sing N N 371 SER CA CB sing N N 372 SER CA HA sing N N 373 SER C O doub N N 374 SER C OXT sing N N 375 SER CB OG sing N N 376 SER CB HB2 sing N N 377 SER CB HB3 sing N N 378 SER OG HG sing N N 379 SER OXT HXT sing N N 380 SO4 S O1 doub N N 381 SO4 S O2 doub N N 382 SO4 S O3 sing N N 383 SO4 S O4 sing N N 384 THR N CA sing N N 385 THR N H sing N N 386 THR N H2 sing N N 387 THR CA C sing N N 388 THR CA CB sing N N 389 THR CA HA sing N N 390 THR C O doub N N 391 THR C OXT sing N N 392 THR CB OG1 sing N N 393 THR CB CG2 sing N N 394 THR CB HB sing N N 395 THR OG1 HG1 sing N N 396 THR CG2 HG21 sing N N 397 THR CG2 HG22 sing N N 398 THR CG2 HG23 sing N N 399 THR OXT HXT sing N N 400 TRP N CA sing N N 401 TRP N H sing N N 402 TRP N H2 sing N N 403 TRP CA C sing N N 404 TRP CA CB sing N N 405 TRP CA HA sing N N 406 TRP C O doub N N 407 TRP C OXT sing N N 408 TRP CB CG sing N N 409 TRP CB HB2 sing N N 410 TRP CB HB3 sing N N 411 TRP CG CD1 doub Y N 412 TRP CG CD2 sing Y N 413 TRP CD1 NE1 sing Y N 414 TRP CD1 HD1 sing N N 415 TRP CD2 CE2 doub Y N 416 TRP CD2 CE3 sing Y N 417 TRP NE1 CE2 sing Y N 418 TRP NE1 HE1 sing N N 419 TRP CE2 CZ2 sing Y N 420 TRP CE3 CZ3 doub Y N 421 TRP CE3 HE3 sing N N 422 TRP CZ2 CH2 doub Y N 423 TRP CZ2 HZ2 sing N N 424 TRP CZ3 CH2 sing Y N 425 TRP CZ3 HZ3 sing N N 426 TRP CH2 HH2 sing N N 427 TRP OXT HXT sing N N 428 TYR N CA sing N N 429 TYR N H sing N N 430 TYR N H2 sing N N 431 TYR CA C sing N N 432 TYR CA CB sing N N 433 TYR CA HA sing N N 434 TYR C O doub N N 435 TYR C OXT sing N N 436 TYR CB CG sing N N 437 TYR CB HB2 sing N N 438 TYR CB HB3 sing N N 439 TYR CG CD1 doub Y N 440 TYR CG CD2 sing Y N 441 TYR CD1 CE1 sing Y N 442 TYR CD1 HD1 sing N N 443 TYR CD2 CE2 doub Y N 444 TYR CD2 HD2 sing N N 445 TYR CE1 CZ doub Y N 446 TYR CE1 HE1 sing N N 447 TYR CE2 CZ sing Y N 448 TYR CE2 HE2 sing N N 449 TYR CZ OH sing N N 450 TYR OH HH sing N N 451 TYR OXT HXT sing N N 452 U OP3 P sing N N 453 U OP3 HOP3 sing N N 454 U P OP1 doub N N 455 U P OP2 sing N N 456 U P "O5'" sing N N 457 U OP2 HOP2 sing N N 458 U "O5'" "C5'" sing N N 459 U "C5'" "C4'" sing N N 460 U "C5'" "H5'" sing N N 461 U "C5'" "H5''" sing N N 462 U "C4'" "O4'" sing N N 463 U "C4'" "C3'" sing N N 464 U "C4'" "H4'" sing N N 465 U "O4'" "C1'" sing N N 466 U "C3'" "O3'" sing N N 467 U "C3'" "C2'" sing N N 468 U "C3'" "H3'" sing N N 469 U "O3'" "HO3'" sing N N 470 U "C2'" "O2'" sing N N 471 U "C2'" "C1'" sing N N 472 U "C2'" "H2'" sing N N 473 U "O2'" "HO2'" sing N N 474 U "C1'" N1 sing N N 475 U "C1'" "H1'" sing N N 476 U N1 C2 sing N N 477 U N1 C6 sing N N 478 U C2 O2 doub N N 479 U C2 N3 sing N N 480 U N3 C4 sing N N 481 U N3 H3 sing N N 482 U C4 O4 doub N N 483 U C4 C5 sing N N 484 U C5 C6 doub N N 485 U C5 H5 sing N N 486 U C6 H6 sing N N 487 VAL N CA sing N N 488 VAL N H sing N N 489 VAL N H2 sing N N 490 VAL CA C sing N N 491 VAL CA CB sing N N 492 VAL CA HA sing N N 493 VAL C O doub N N 494 VAL C OXT sing N N 495 VAL CB CG1 sing N N 496 VAL CB CG2 sing N N 497 VAL CB HB sing N N 498 VAL CG1 HG11 sing N N 499 VAL CG1 HG12 sing N N 500 VAL CG1 HG13 sing N N 501 VAL CG2 HG21 sing N N 502 VAL CG2 HG22 sing N N 503 VAL CG2 HG23 sing N N 504 VAL OXT HXT sing N N 505 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 'MAGNESIUM ION' MG 4 'CHLORIDE ION' CL 5 'SULFATE ION' SO4 6 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 4S2W _pdbx_initial_refinement_model.details 'PDB ENTRY 4S2W' #