HEADER OXIDOREDUCTASE 19-FEB-15 4S3M TITLE EVIDENCE OF KINETIC COOPERATIVITY IN DIMERIC KETOPANTOATE REDUCTASE TITLE 2 FROM STAPHYLOCOCCUS AUREUS COMPND MOL_ID: 1; COMPND 2 MOLECULE: 2-DEHYDROPANTOATE 2-REDUCTASE; COMPND 3 CHAIN: A, B; COMPND 4 EC: 1.1.1.169; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STAPHYLOCOCCUS AUREUS SUBSP. AUREUS MU50; SOURCE 3 ORGANISM_TAXID: 158878; SOURCE 4 STRAIN: MU50 / ATCC 700699; SOURCE 5 GENE: SAV2600; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS ROSSMAN FOLD, NUCLEOTIDE BINDING DOMAIN, NADPH, OXIDATION, KEYWDS 2 OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR J.E.SANCHEZ,R.M.WALSH JR.,Z.A.WOOD REVDAT 4 28-FEB-24 4S3M 1 REMARK SEQADV REVDAT 3 25-APR-18 4S3M 1 AUTHOR JRNL REVDAT 2 10-JUN-15 4S3M 1 JRNL REVDAT 1 11-MAR-15 4S3M 0 JRNL AUTH J.E.SANCHEZ,P.G.GROSS,R.W.GOETZE,R.M.WALSH JR.,W.B.PEEPLES, JRNL AUTH 2 Z.A.WOOD JRNL TITL EVIDENCE OF KINETIC COOPERATIVITY IN DIMERIC KETOPANTOATE JRNL TITL 2 REDUCTASE FROM STAPHYLOCOCCUS AUREUS. JRNL REF BIOCHEMISTRY V. 54 3360 2015 JRNL REFN ISSN 0006-2960 JRNL PMID 25946571 JRNL DOI 10.1021/ACS.BIOCHEM.5B00174 REMARK 2 REMARK 2 RESOLUTION. 2.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.8.4_1496) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.97 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.860 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.4 REMARK 3 NUMBER OF REFLECTIONS : 20177 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.227 REMARK 3 R VALUE (WORKING SET) : 0.222 REMARK 3 FREE R VALUE : 0.268 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2018 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 30.9763 - 6.2614 0.97 1345 150 0.1718 0.2224 REMARK 3 2 6.2614 - 4.9765 0.99 1331 148 0.1998 0.2546 REMARK 3 3 4.9765 - 4.3494 0.99 1330 147 0.1727 0.2058 REMARK 3 4 4.3494 - 3.9526 0.99 1315 147 0.1876 0.2315 REMARK 3 5 3.9526 - 3.6698 0.99 1319 146 0.2040 0.2614 REMARK 3 6 3.6698 - 3.4537 0.99 1329 148 0.2289 0.2742 REMARK 3 7 3.4537 - 3.2809 0.99 1310 145 0.2390 0.3075 REMARK 3 8 3.2809 - 3.1383 0.99 1331 148 0.2554 0.3457 REMARK 3 9 3.1383 - 3.0176 1.00 1300 144 0.2839 0.3117 REMARK 3 10 3.0176 - 2.9135 1.00 1315 147 0.2910 0.2940 REMARK 3 11 2.9135 - 2.8225 0.99 1304 144 0.2928 0.3650 REMARK 3 12 2.8225 - 2.7418 1.00 1338 149 0.3157 0.3481 REMARK 3 13 2.7418 - 2.6697 0.98 1296 145 0.3389 0.3572 REMARK 3 14 2.6697 - 2.6050 0.76 996 110 0.3632 0.3785 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.420 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 29.930 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.002 4375 REMARK 3 ANGLE : 0.665 5978 REMARK 3 CHIRALITY : 0.024 709 REMARK 3 PLANARITY : 0.002 750 REMARK 3 DIHEDRAL : 15.346 1596 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 3 THROUGH 98 ) REMARK 3 ORIGIN FOR THE GROUP (A): 16.9130 18.9439 14.0516 REMARK 3 T TENSOR REMARK 3 T11: 0.3623 T22: 0.3019 REMARK 3 T33: 0.2579 T12: -0.0404 REMARK 3 T13: 0.0305 T23: -0.0556 REMARK 3 L TENSOR REMARK 3 L11: 8.0483 L22: 6.3065 REMARK 3 L33: 5.4509 L12: -0.9889 REMARK 3 L13: 2.1497 L23: -2.2422 REMARK 3 S TENSOR REMARK 3 S11: -0.0494 S12: 0.2142 S13: -0.1951 REMARK 3 S21: -0.1519 S22: -0.0708 S23: -0.4527 REMARK 3 S31: -0.0742 S32: 0.4115 S33: 0.0986 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 99 THROUGH 158 ) REMARK 3 ORIGIN FOR THE GROUP (A): 7.1862 13.2503 15.0006 REMARK 3 T TENSOR REMARK 3 T11: 0.3687 T22: 0.3250 REMARK 3 T33: 0.3743 T12: -0.0694 REMARK 3 T13: 0.0036 T23: -0.0332 REMARK 3 L TENSOR REMARK 3 L11: 7.8432 L22: 2.2100 REMARK 3 L33: 7.3914 L12: -1.9468 REMARK 3 L13: 3.7136 L23: -2.7563 REMARK 3 S TENSOR REMARK 3 S11: 0.1679 S12: -0.1130 S13: -0.6145 REMARK 3 S21: -0.0923 S22: 0.3473 S23: 0.2423 REMARK 3 S31: 0.5521 S32: -0.4861 S33: -0.5237 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 159 THROUGH 198 ) REMARK 3 ORIGIN FOR THE GROUP (A): -0.4546 10.4370 35.4637 REMARK 3 T TENSOR REMARK 3 T11: 0.4282 T22: 0.4531 REMARK 3 T33: 0.4250 T12: 0.0274 REMARK 3 T13: 0.0587 T23: -0.0431 REMARK 3 L TENSOR REMARK 3 L11: 1.3410 L22: 0.9485 REMARK 3 L33: 2.8382 L12: 0.6125 REMARK 3 L13: -1.7505 L23: -1.4104 REMARK 3 S TENSOR REMARK 3 S11: 0.0812 S12: 0.2790 S13: 0.1196 REMARK 3 S21: -0.1433 S22: -0.0438 S23: -0.0605 REMARK 3 S31: 0.3453 S32: 0.2136 S33: -0.0013 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 199 THROUGH 283 ) REMARK 3 ORIGIN FOR THE GROUP (A): -6.3628 16.2668 34.2813 REMARK 3 T TENSOR REMARK 3 T11: 0.4756 T22: 0.4551 REMARK 3 T33: 0.4729 T12: 0.0756 REMARK 3 T13: 0.1547 T23: 0.0551 REMARK 3 L TENSOR REMARK 3 L11: 7.1851 L22: 4.8293 REMARK 3 L33: 8.7663 L12: 1.1187 REMARK 3 L13: 0.2076 L23: 0.2467 REMARK 3 S TENSOR REMARK 3 S11: 0.3076 S12: 0.6294 S13: 0.7449 REMARK 3 S21: -0.3459 S22: 0.0682 S23: 0.0279 REMARK 3 S31: -0.4570 S32: -0.3776 S33: -0.3545 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 4 THROUGH 161 ) REMARK 3 ORIGIN FOR THE GROUP (A): -19.9671 -13.8926 23.7068 REMARK 3 T TENSOR REMARK 3 T11: 0.4090 T22: 0.5082 REMARK 3 T33: 0.3868 T12: -0.0950 REMARK 3 T13: -0.0318 T23: -0.0979 REMARK 3 L TENSOR REMARK 3 L11: 7.6544 L22: 3.5125 REMARK 3 L33: 4.6179 L12: -0.6824 REMARK 3 L13: 2.8132 L23: -0.1122 REMARK 3 S TENSOR REMARK 3 S11: 0.0804 S12: 0.1266 S13: -0.5966 REMARK 3 S21: 0.2985 S22: -0.1014 S23: 0.1178 REMARK 3 S31: -0.1405 S32: -0.2169 S33: 0.0045 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 162 THROUGH 285 ) REMARK 3 ORIGIN FOR THE GROUP (A): -29.7611 -11.3928 -1.0055 REMARK 3 T TENSOR REMARK 3 T11: 0.3983 T22: 0.4648 REMARK 3 T33: 0.5987 T12: -0.0518 REMARK 3 T13: 0.0634 T23: -0.1784 REMARK 3 L TENSOR REMARK 3 L11: 4.4492 L22: 2.5019 REMARK 3 L33: 4.6012 L12: -1.6071 REMARK 3 L13: -0.9628 L23: 1.7210 REMARK 3 S TENSOR REMARK 3 S11: 0.3761 S12: -0.5297 S13: 0.8318 REMARK 3 S21: -0.0959 S22: 0.2734 S23: -0.8267 REMARK 3 S31: -0.5616 S32: 0.8294 S33: -0.4997 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4S3M COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 23-FEB-15. REMARK 100 THE DEPOSITION ID IS D_1000088137. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-OCT-12 REMARK 200 TEMPERATURE (KELVIN) : 293 REMARK 200 PH : 6.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 22-BM REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : 1.0 REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS, XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 20271 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.600 REMARK 200 RESOLUTION RANGE LOW (A) : 31.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.72 REMARK 200 COMPLETENESS FOR SHELL (%) : 94.4 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.55 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.54 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 4MM NADPH, 5-6% TACSIMATE, 100MM MES, REMARK 280 15-16% POLYETHYLENE GLYCOL 3350, PH 6.0, VAPOR DIFFUSION, REMARK 280 SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z+1/2 REMARK 290 4555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 23.24567 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 33.38200 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 57.44387 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 23.24567 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 33.38200 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 57.44387 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4240 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 23520 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -18.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 23.24567 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 33.38200 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 57.44387 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 SER A 2 REMARK 465 PRO A 233 REMARK 465 ASP A 234 REMARK 465 GLU A 235 REMARK 465 MET A 236 REMARK 465 GLY A 237 REMARK 465 THR A 238 REMARK 465 SER A 239 REMARK 465 MET A 240 REMARK 465 TYR A 241 REMARK 465 TYR A 242 REMARK 465 ASP A 243 REMARK 465 ILE A 244 REMARK 465 VAL A 245 REMARK 465 HIS A 246 REMARK 465 GLN A 247 REMARK 465 GLN A 248 REMARK 465 PRO A 249 REMARK 465 LEU A 250 REMARK 465 GLN A 284 REMARK 465 GLN A 285 REMARK 465 ASN A 286 REMARK 465 GLU A 287 REMARK 465 GLY A 288 REMARK 465 HIS A 289 REMARK 465 HIS A 290 REMARK 465 HIS A 291 REMARK 465 HIS A 292 REMARK 465 HIS A 293 REMARK 465 HIS A 294 REMARK 465 MET B 1 REMARK 465 SER B 2 REMARK 465 LEU B 3 REMARK 465 GLY B 231 REMARK 465 TYR B 232 REMARK 465 PRO B 233 REMARK 465 ASP B 234 REMARK 465 GLU B 235 REMARK 465 MET B 236 REMARK 465 GLY B 237 REMARK 465 THR B 238 REMARK 465 SER B 239 REMARK 465 MET B 240 REMARK 465 TYR B 241 REMARK 465 TYR B 242 REMARK 465 ASP B 243 REMARK 465 ILE B 244 REMARK 465 VAL B 245 REMARK 465 HIS B 246 REMARK 465 GLN B 247 REMARK 465 GLN B 248 REMARK 465 PRO B 249 REMARK 465 ASN B 286 REMARK 465 GLU B 287 REMARK 465 GLY B 288 REMARK 465 HIS B 289 REMARK 465 HIS B 290 REMARK 465 HIS B 291 REMARK 465 HIS B 292 REMARK 465 HIS B 293 REMARK 465 HIS B 294 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 HIS A 87 -163.00 -107.35 REMARK 500 PRO A 106 48.32 -81.84 REMARK 500 TYR A 116 73.79 -119.90 REMARK 500 PHE A 129 -62.23 -95.85 REMARK 500 ASP A 131 144.92 67.17 REMARK 500 SER A 218 -164.06 -114.85 REMARK 500 ILE A 255 -82.57 -108.22 REMARK 500 TYR B 116 67.81 -112.65 REMARK 500 PHE B 129 -69.51 -107.10 REMARK 500 ASP B 131 150.13 68.17 REMARK 500 TYR B 132 42.07 -140.51 REMARK 500 ILE B 255 -77.18 -111.63 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NAP A 500 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NAP B 500 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4YCA RELATED DB: PDB REMARK 900 WILDTYPE KPR, WITH NADPH DBREF 4S3M A 3 286 UNP Q99R37 Q99R37_STAAM 2 285 DBREF 4S3M B 3 286 UNP Q99R37 Q99R37_STAAM 2 285 SEQADV 4S3M MET A 1 UNP Q99R37 EXPRESSION TAG SEQADV 4S3M SER A 2 UNP Q99R37 EXPRESSION TAG SEQADV 4S3M LEU A 181 UNP Q99R37 ALA 180 ENGINEERED MUTATION SEQADV 4S3M GLU A 287 UNP Q99R37 EXPRESSION TAG SEQADV 4S3M GLY A 288 UNP Q99R37 EXPRESSION TAG SEQADV 4S3M HIS A 289 UNP Q99R37 EXPRESSION TAG SEQADV 4S3M HIS A 290 UNP Q99R37 EXPRESSION TAG SEQADV 4S3M HIS A 291 UNP Q99R37 EXPRESSION TAG SEQADV 4S3M HIS A 292 UNP Q99R37 EXPRESSION TAG SEQADV 4S3M HIS A 293 UNP Q99R37 EXPRESSION TAG SEQADV 4S3M HIS A 294 UNP Q99R37 EXPRESSION TAG SEQADV 4S3M MET B 1 UNP Q99R37 EXPRESSION TAG SEQADV 4S3M SER B 2 UNP Q99R37 EXPRESSION TAG SEQADV 4S3M LEU B 181 UNP Q99R37 ALA 180 ENGINEERED MUTATION SEQADV 4S3M GLU B 287 UNP Q99R37 EXPRESSION TAG SEQADV 4S3M GLY B 288 UNP Q99R37 EXPRESSION TAG SEQADV 4S3M HIS B 289 UNP Q99R37 EXPRESSION TAG SEQADV 4S3M HIS B 290 UNP Q99R37 EXPRESSION TAG SEQADV 4S3M HIS B 291 UNP Q99R37 EXPRESSION TAG SEQADV 4S3M HIS B 292 UNP Q99R37 EXPRESSION TAG SEQADV 4S3M HIS B 293 UNP Q99R37 EXPRESSION TAG SEQADV 4S3M HIS B 294 UNP Q99R37 EXPRESSION TAG SEQRES 1 A 294 MET SER LEU SER VAL ALA ILE ILE GLY PRO GLY ALA VAL SEQRES 2 A 294 GLY THR THR ILE ALA TYR GLU LEU GLN GLN SER LEU PRO SEQRES 3 A 294 HIS THR THR LEU ILE GLY ARG HIS ALA LYS THR ILE THR SEQRES 4 A 294 TYR TYR THR VAL PRO HIS ALA PRO ALA GLN ASP ILE VAL SEQRES 5 A 294 VAL LYS GLY TYR GLU ASP VAL THR ASN THR PHE ASP VAL SEQRES 6 A 294 ILE ILE ILE ALA VAL LYS THR HIS GLN LEU ASP ALA VAL SEQRES 7 A 294 ILE PRO HIS LEU THR TYR LEU ALA HIS GLU ASP THR LEU SEQRES 8 A 294 ILE ILE LEU ALA GLN ASN GLY TYR GLY GLN LEU GLU HIS SEQRES 9 A 294 ILE PRO PHE LYS ASN VAL CYS GLN ALA VAL VAL TYR ILE SEQRES 10 A 294 SER GLY GLN LYS LYS GLY ASP VAL VAL THR HIS PHE ARG SEQRES 11 A 294 ASP TYR GLN LEU ARG ILE GLN ASP ASN ALA LEU THR ARG SEQRES 12 A 294 GLN PHE ARG ASP LEU VAL GLN ASP SER GLN ILE ASP ILE SEQRES 13 A 294 VAL LEU GLU ALA ASN ILE GLN GLN ALA ILE TRP TYR LYS SEQRES 14 A 294 LEU LEU VAL ASN LEU GLY ILE ASN SER ILE THR LEU LEU SEQRES 15 A 294 GLY ARG GLN THR VAL ALA ILE MET HIS ASN PRO GLU ILE SEQRES 16 A 294 ARG ILE LEU CYS ARG GLN LEU LEU LEU ASP GLY CYS ARG SEQRES 17 A 294 VAL ALA GLN ALA GLU GLY LEU ASN PHE SER GLU GLN THR SEQRES 18 A 294 VAL ASP THR ILE MET THR ILE TYR GLN GLY TYR PRO ASP SEQRES 19 A 294 GLU MET GLY THR SER MET TYR TYR ASP ILE VAL HIS GLN SEQRES 20 A 294 GLN PRO LEU GLU VAL GLU ALA ILE GLN GLY PHE ILE TYR SEQRES 21 A 294 ARG ARG ALA ARG GLU HIS ASN LEU ASP THR PRO TYR LEU SEQRES 22 A 294 ASP THR ILE TYR SER PHE LEU ARG ALA TYR GLN GLN ASN SEQRES 23 A 294 GLU GLY HIS HIS HIS HIS HIS HIS SEQRES 1 B 294 MET SER LEU SER VAL ALA ILE ILE GLY PRO GLY ALA VAL SEQRES 2 B 294 GLY THR THR ILE ALA TYR GLU LEU GLN GLN SER LEU PRO SEQRES 3 B 294 HIS THR THR LEU ILE GLY ARG HIS ALA LYS THR ILE THR SEQRES 4 B 294 TYR TYR THR VAL PRO HIS ALA PRO ALA GLN ASP ILE VAL SEQRES 5 B 294 VAL LYS GLY TYR GLU ASP VAL THR ASN THR PHE ASP VAL SEQRES 6 B 294 ILE ILE ILE ALA VAL LYS THR HIS GLN LEU ASP ALA VAL SEQRES 7 B 294 ILE PRO HIS LEU THR TYR LEU ALA HIS GLU ASP THR LEU SEQRES 8 B 294 ILE ILE LEU ALA GLN ASN GLY TYR GLY GLN LEU GLU HIS SEQRES 9 B 294 ILE PRO PHE LYS ASN VAL CYS GLN ALA VAL VAL TYR ILE SEQRES 10 B 294 SER GLY GLN LYS LYS GLY ASP VAL VAL THR HIS PHE ARG SEQRES 11 B 294 ASP TYR GLN LEU ARG ILE GLN ASP ASN ALA LEU THR ARG SEQRES 12 B 294 GLN PHE ARG ASP LEU VAL GLN ASP SER GLN ILE ASP ILE SEQRES 13 B 294 VAL LEU GLU ALA ASN ILE GLN GLN ALA ILE TRP TYR LYS SEQRES 14 B 294 LEU LEU VAL ASN LEU GLY ILE ASN SER ILE THR LEU LEU SEQRES 15 B 294 GLY ARG GLN THR VAL ALA ILE MET HIS ASN PRO GLU ILE SEQRES 16 B 294 ARG ILE LEU CYS ARG GLN LEU LEU LEU ASP GLY CYS ARG SEQRES 17 B 294 VAL ALA GLN ALA GLU GLY LEU ASN PHE SER GLU GLN THR SEQRES 18 B 294 VAL ASP THR ILE MET THR ILE TYR GLN GLY TYR PRO ASP SEQRES 19 B 294 GLU MET GLY THR SER MET TYR TYR ASP ILE VAL HIS GLN SEQRES 20 B 294 GLN PRO LEU GLU VAL GLU ALA ILE GLN GLY PHE ILE TYR SEQRES 21 B 294 ARG ARG ALA ARG GLU HIS ASN LEU ASP THR PRO TYR LEU SEQRES 22 B 294 ASP THR ILE TYR SER PHE LEU ARG ALA TYR GLN GLN ASN SEQRES 23 B 294 GLU GLY HIS HIS HIS HIS HIS HIS HET NAP A 500 48 HET NAP B 500 48 HETNAM NAP NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE HETSYN NAP 2'-MONOPHOSPHOADENOSINE 5'-DIPHOSPHORIBOSE FORMUL 3 NAP 2(C21 H28 N7 O17 P3) FORMUL 5 HOH *42(H2 O) HELIX 1 1 GLY A 11 GLN A 23 1 13 HELIX 2 2 LYS A 71 HIS A 73 5 3 HELIX 3 3 GLN A 74 ILE A 79 1 6 HELIX 4 4 HIS A 81 LEU A 85 1 5 HELIX 5 5 GLN A 101 ILE A 105 5 5 HELIX 6 6 ASN A 139 VAL A 149 1 11 HELIX 7 7 ASN A 161 ARG A 184 1 24 HELIX 8 8 THR A 186 HIS A 191 5 6 HELIX 9 9 ASN A 192 GLU A 213 1 22 HELIX 10 10 SER A 218 GLN A 230 1 13 HELIX 11 11 ILE A 255 HIS A 266 1 12 HELIX 12 12 THR A 270 ARG A 281 1 12 HELIX 13 13 GLY B 11 LEU B 25 1 15 HELIX 14 14 LYS B 71 LEU B 75 5 5 HELIX 15 15 VAL B 78 PRO B 80 5 3 HELIX 16 16 HIS B 81 LEU B 85 1 5 HELIX 17 17 GLN B 101 ILE B 105 5 5 HELIX 18 18 ASN B 139 VAL B 149 1 11 HELIX 19 19 ILE B 162 GLY B 183 1 22 HELIX 20 20 THR B 186 HIS B 191 5 6 HELIX 21 21 ASN B 192 GLU B 213 1 22 HELIX 22 22 SER B 218 TYR B 229 1 12 HELIX 23 23 GLU B 251 ALA B 254 5 4 HELIX 24 24 ILE B 255 HIS B 266 1 12 HELIX 25 25 THR B 270 GLN B 285 1 16 SHEET 1 A10 ASP A 155 GLU A 159 0 SHEET 2 A10 VAL A 125 GLN A 137 1 N LEU A 134 O ASP A 155 SHEET 3 A10 VAL A 110 LYS A 122 -1 N VAL A 114 O ARG A 135 SHEET 4 A10 ALA A 86 ALA A 95 1 N ILE A 92 O CYS A 111 SHEET 5 A10 PHE A 63 ILE A 68 1 N ILE A 66 O ILE A 93 SHEET 6 A10 VAL A 5 ILE A 8 1 N ALA A 6 O ILE A 67 SHEET 7 A10 THR A 29 GLY A 32 1 O THR A 29 N ILE A 7 SHEET 8 A10 GLN A 49 GLY A 55 1 O LYS A 54 N LEU A 30 SHEET 9 A10 LYS A 36 TYR A 41 -1 N TYR A 40 O GLN A 49 SHEET 10 A10 VAL A 125 GLN A 137 1 O HIS A 128 N TYR A 41 SHEET 1 B 9 ASN B 109 GLN B 112 0 SHEET 2 B 9 ALA B 86 LEU B 94 1 N ILE B 92 O ASN B 109 SHEET 3 B 9 PHE B 63 ILE B 68 1 N ILE B 66 O ILE B 93 SHEET 4 B 9 VAL B 5 ILE B 8 1 N ALA B 6 O ILE B 67 SHEET 5 B 9 THR B 29 GLY B 32 1 O ILE B 31 N ILE B 7 SHEET 6 B 9 GLN B 49 GLY B 55 1 O LYS B 54 N GLY B 32 SHEET 7 B 9 LYS B 36 TYR B 41 -1 N TYR B 40 O GLN B 49 SHEET 8 B 9 VAL B 125 HIS B 128 1 O HIS B 128 N TYR B 41 SHEET 9 B 9 GLY B 119 LYS B 122 -1 N GLN B 120 O THR B 127 SHEET 1 C 3 VAL B 114 TYR B 116 0 SHEET 2 C 3 GLN B 133 GLN B 137 -1 O GLN B 133 N TYR B 116 SHEET 3 C 3 ASP B 155 GLU B 159 1 O VAL B 157 N LEU B 134 SITE 1 AC1 20 PRO A 10 GLY A 11 ALA A 12 VAL A 13 SITE 2 AC1 20 ARG A 33 LYS A 36 TYR A 56 LYS A 71 SITE 3 AC1 20 GLN A 74 ALA A 95 ASN A 97 VAL A 115 SITE 4 AC1 20 ILE A 117 SER A 118 GLY A 119 LYS A 121 SITE 5 AC1 20 LYS A 169 GLU A 251 HOH A 606 HOH A 609 SITE 1 AC2 21 GLY B 9 PRO B 10 GLY B 11 ALA B 12 SITE 2 AC2 21 VAL B 13 ARG B 33 LYS B 36 TYR B 56 SITE 3 AC2 21 VAL B 70 LYS B 71 GLN B 74 ALA B 77 SITE 4 AC2 21 ALA B 95 ASN B 97 VAL B 115 ILE B 117 SITE 5 AC2 21 SER B 118 GLY B 119 LYS B 121 GLU B 251 SITE 6 AC2 21 HOH B 607 CRYST1 88.648 66.764 122.378 90.00 110.15 90.00 I 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011281 0.000000 0.004139 0.00000 SCALE2 0.000000 0.014978 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008704 0.00000