data_4TKC # _entry.id 4TKC # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4TKC pdb_00004tkc 10.2210/pdb4tkc/pdb WWPDB D_1000201661 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2015-06-03 2 'Structure model' 1 1 2019-02-20 3 'Structure model' 1 2 2020-07-29 4 'Structure model' 1 3 2024-03-20 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 3 'Structure model' repository Remediation 'Carbohydrate remediation' ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' 3 2 'Structure model' 'Derived calculations' 4 2 'Structure model' Other 5 2 'Structure model' 'Source and taxonomy' 6 2 'Structure model' 'Structure summary' 7 3 'Structure model' 'Data collection' 8 3 'Structure model' 'Derived calculations' 9 3 'Structure model' 'Refinement description' 10 3 'Structure model' 'Structure summary' 11 4 'Structure model' 'Data collection' 12 4 'Structure model' 'Database references' 13 4 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' entity 3 2 'Structure model' entity_src_gen 4 2 'Structure model' pdbx_database_status 5 2 'Structure model' pdbx_entity_nonpoly 6 2 'Structure model' pdbx_struct_assembly 7 2 'Structure model' pdbx_struct_oper_list 8 3 'Structure model' chem_comp 9 3 'Structure model' entity 10 3 'Structure model' pdbx_chem_comp_identifier 11 3 'Structure model' pdbx_entity_nonpoly 12 3 'Structure model' refine_hist 13 3 'Structure model' struct_site 14 3 'Structure model' struct_site_gen 15 4 'Structure model' chem_comp 16 4 'Structure model' chem_comp_atom 17 4 'Structure model' chem_comp_bond 18 4 'Structure model' database_2 # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.journal_id_CSD' 2 2 'Structure model' '_entity.pdbx_description' 3 2 'Structure model' '_entity.src_method' 4 2 'Structure model' '_entity_src_gen.pdbx_alt_source_flag' 5 2 'Structure model' '_entity_src_gen.pdbx_host_org_ncbi_taxonomy_id' 6 2 'Structure model' '_entity_src_gen.pdbx_host_org_scientific_name' 7 2 'Structure model' '_pdbx_database_status.pdb_format_compatible' 8 2 'Structure model' '_pdbx_entity_nonpoly.name' 9 2 'Structure model' '_pdbx_struct_assembly.oligomeric_details' 10 2 'Structure model' '_pdbx_struct_oper_list.symmetry_operation' 11 3 'Structure model' '_chem_comp.name' 12 3 'Structure model' '_chem_comp.type' 13 3 'Structure model' '_entity.pdbx_description' 14 3 'Structure model' '_pdbx_entity_nonpoly.name' 15 3 'Structure model' '_refine_hist.number_atoms_solvent' 16 3 'Structure model' '_refine_hist.pdbx_number_atoms_ligand' 17 3 'Structure model' '_refine_hist.pdbx_number_atoms_nucleic_acid' 18 3 'Structure model' '_refine_hist.pdbx_number_atoms_protein' 19 4 'Structure model' '_chem_comp.pdbx_synonyms' 20 4 'Structure model' '_database_2.pdbx_DOI' 21 4 'Structure model' '_database_2.pdbx_database_accession' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 4TKC _pdbx_database_status.recvd_initial_deposition_date 2014-05-26 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Noma, Y.' 1 'Shimokawa, M.' 2 'Maeganeku, C.' 3 'Motoshima, H.' 4 'Watanabe, K.' 5 'Minami, Y.' 6 'Yagi, F.' 7 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country ? _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'To Be Published' _citation.journal_id_ASTM ? _citation.journal_id_CSD 0353 _citation.journal_id_ISSN ? _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title 'Structure of Japanese Marasmius oreades lectin complexed with mannose.' _citation.year ? _citation.database_id_CSD ? _citation.pdbx_database_id_DOI ? _citation.pdbx_database_id_PubMed ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Noma, Y.' 1 ? primary 'Shimokawa, M.' 2 ? primary 'Maeganeku, C.' 3 ? primary 'Motoshima, H.' 4 ? primary 'Watanabe, K.' 5 ? primary 'Yagi, F.' 6 ? primary 'Minami, Y.' 7 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Mannose recognizing lectin' 13117.445 1 ? ? ? ? 2 non-polymer man beta-D-mannopyranose 180.156 1 ? ? ? ? 3 non-polymer syn GLYCEROL 92.094 1 ? ? ? ? 4 non-polymer man alpha-D-mannopyranose 180.156 1 ? ? ? ? 5 water nat water 18.015 132 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MSYVHPYGSTLPENGVIGRGYALISDSGRVEFRVTDEGNIQLFLDDSRKLWSVDGKNASFVKMQTDGNCVGYDPNGTAVW HTATNGDDHPYNLVCQNDGNLVVYAKGGKAVWHTNTAVVH ; _entity_poly.pdbx_seq_one_letter_code_can ;MSYVHPYGSTLPENGVIGRGYALISDSGRVEFRVTDEGNIQLFLDDSRKLWSVDGKNASFVKMQTDGNCVGYDPNGTAVW HTATNGDDHPYNLVCQNDGNLVVYAKGGKAVWHTNTAVVH ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 beta-D-mannopyranose BMA 3 GLYCEROL GOL 4 alpha-D-mannopyranose MAN 5 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 SER n 1 3 TYR n 1 4 VAL n 1 5 HIS n 1 6 PRO n 1 7 TYR n 1 8 GLY n 1 9 SER n 1 10 THR n 1 11 LEU n 1 12 PRO n 1 13 GLU n 1 14 ASN n 1 15 GLY n 1 16 VAL n 1 17 ILE n 1 18 GLY n 1 19 ARG n 1 20 GLY n 1 21 TYR n 1 22 ALA n 1 23 LEU n 1 24 ILE n 1 25 SER n 1 26 ASP n 1 27 SER n 1 28 GLY n 1 29 ARG n 1 30 VAL n 1 31 GLU n 1 32 PHE n 1 33 ARG n 1 34 VAL n 1 35 THR n 1 36 ASP n 1 37 GLU n 1 38 GLY n 1 39 ASN n 1 40 ILE n 1 41 GLN n 1 42 LEU n 1 43 PHE n 1 44 LEU n 1 45 ASP n 1 46 ASP n 1 47 SER n 1 48 ARG n 1 49 LYS n 1 50 LEU n 1 51 TRP n 1 52 SER n 1 53 VAL n 1 54 ASP n 1 55 GLY n 1 56 LYS n 1 57 ASN n 1 58 ALA n 1 59 SER n 1 60 PHE n 1 61 VAL n 1 62 LYS n 1 63 MET n 1 64 GLN n 1 65 THR n 1 66 ASP n 1 67 GLY n 1 68 ASN n 1 69 CYS n 1 70 VAL n 1 71 GLY n 1 72 TYR n 1 73 ASP n 1 74 PRO n 1 75 ASN n 1 76 GLY n 1 77 THR n 1 78 ALA n 1 79 VAL n 1 80 TRP n 1 81 HIS n 1 82 THR n 1 83 ALA n 1 84 THR n 1 85 ASN n 1 86 GLY n 1 87 ASP n 1 88 ASP n 1 89 HIS n 1 90 PRO n 1 91 TYR n 1 92 ASN n 1 93 LEU n 1 94 VAL n 1 95 CYS n 1 96 GLN n 1 97 ASN n 1 98 ASP n 1 99 GLY n 1 100 ASN n 1 101 LEU n 1 102 VAL n 1 103 VAL n 1 104 TYR n 1 105 ALA n 1 106 LYS n 1 107 GLY n 1 108 GLY n 1 109 LYS n 1 110 ALA n 1 111 VAL n 1 112 TRP n 1 113 HIS n 1 114 THR n 1 115 ASN n 1 116 THR n 1 117 ALA n 1 118 VAL n 1 119 VAL n 1 120 HIS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 120 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene Mlec1 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Marasmius oreades' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 181124 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 BMA 'D-saccharide, beta linking' . beta-D-mannopyranose 'beta-D-mannose; D-mannose; mannose' 'C6 H12 O6' 180.156 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MAN 'D-saccharide, alpha linking' . alpha-D-mannopyranose 'alpha-D-mannose; D-mannose; mannose' 'C6 H12 O6' 180.156 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier BMA 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DManpb BMA 'COMMON NAME' GMML 1.0 b-D-mannopyranose BMA 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-Manp BMA 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Man MAN 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DManpa MAN 'COMMON NAME' GMML 1.0 a-D-mannopyranose MAN 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 a-D-Manp MAN 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Man # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 0 ? ? ? A . n A 1 2 SER 2 1 1 SER SER A . n A 1 3 TYR 3 2 2 TYR TYR A . n A 1 4 VAL 4 3 3 VAL VAL A . n A 1 5 HIS 5 4 4 HIS HIS A . n A 1 6 PRO 6 5 5 PRO PRO A . n A 1 7 TYR 7 6 6 TYR TYR A . n A 1 8 GLY 8 7 7 GLY GLY A . n A 1 9 SER 9 8 8 SER SER A . n A 1 10 THR 10 9 9 THR THR A . n A 1 11 LEU 11 10 10 LEU LEU A . n A 1 12 PRO 12 11 11 PRO PRO A . n A 1 13 GLU 13 12 12 GLU GLU A . n A 1 14 ASN 14 13 13 ASN ASN A . n A 1 15 GLY 15 14 14 GLY GLY A . n A 1 16 VAL 16 15 15 VAL VAL A . n A 1 17 ILE 17 16 16 ILE ILE A . n A 1 18 GLY 18 17 17 GLY GLY A . n A 1 19 ARG 19 18 18 ARG ARG A . n A 1 20 GLY 20 19 19 GLY GLY A . n A 1 21 TYR 21 20 20 TYR TYR A . n A 1 22 ALA 22 21 21 ALA ALA A . n A 1 23 LEU 23 22 22 LEU LEU A . n A 1 24 ILE 24 23 23 ILE ILE A . n A 1 25 SER 25 24 24 SER SER A . n A 1 26 ASP 26 25 25 ASP ASP A . n A 1 27 SER 27 26 26 SER SER A . n A 1 28 GLY 28 27 27 GLY GLY A . n A 1 29 ARG 29 28 28 ARG ARG A . n A 1 30 VAL 30 29 29 VAL VAL A . n A 1 31 GLU 31 30 30 GLU GLU A . n A 1 32 PHE 32 31 31 PHE PHE A . n A 1 33 ARG 33 32 32 ARG ARG A . n A 1 34 VAL 34 33 33 VAL VAL A . n A 1 35 THR 35 34 34 THR THR A . n A 1 36 ASP 36 35 35 ASP ASP A . n A 1 37 GLU 37 36 36 GLU GLU A . n A 1 38 GLY 38 37 37 GLY GLY A . n A 1 39 ASN 39 38 38 ASN ASN A . n A 1 40 ILE 40 39 39 ILE ILE A . n A 1 41 GLN 41 40 40 GLN GLN A . n A 1 42 LEU 42 41 41 LEU LEU A . n A 1 43 PHE 43 42 42 PHE PHE A . n A 1 44 LEU 44 43 43 LEU LEU A . n A 1 45 ASP 45 44 44 ASP ASP A . n A 1 46 ASP 46 45 45 ASP ASP A . n A 1 47 SER 47 46 46 SER SER A . n A 1 48 ARG 48 47 47 ARG ARG A . n A 1 49 LYS 49 48 48 LYS LYS A . n A 1 50 LEU 50 49 49 LEU LEU A . n A 1 51 TRP 51 50 50 TRP TRP A . n A 1 52 SER 52 51 51 SER SER A . n A 1 53 VAL 53 52 52 VAL VAL A . n A 1 54 ASP 54 53 53 ASP ASP A . n A 1 55 GLY 55 54 54 GLY GLY A . n A 1 56 LYS 56 55 55 LYS LYS A . n A 1 57 ASN 57 56 56 ASN ASN A . n A 1 58 ALA 58 57 57 ALA ALA A . n A 1 59 SER 59 58 58 SER SER A . n A 1 60 PHE 60 59 59 PHE PHE A . n A 1 61 VAL 61 60 60 VAL VAL A . n A 1 62 LYS 62 61 61 LYS LYS A . n A 1 63 MET 63 62 62 MET MET A . n A 1 64 GLN 64 63 63 GLN GLN A . n A 1 65 THR 65 64 64 THR THR A . n A 1 66 ASP 66 65 65 ASP ASP A . n A 1 67 GLY 67 66 66 GLY GLY A . n A 1 68 ASN 68 67 67 ASN ASN A . n A 1 69 CYS 69 68 68 CYS CYS A . n A 1 70 VAL 70 69 69 VAL VAL A . n A 1 71 GLY 71 70 70 GLY GLY A . n A 1 72 TYR 72 71 71 TYR TYR A . n A 1 73 ASP 73 72 72 ASP ASP A . n A 1 74 PRO 74 73 73 PRO PRO A . n A 1 75 ASN 75 74 74 ASN ASN A . n A 1 76 GLY 76 75 75 GLY GLY A . n A 1 77 THR 77 76 76 THR THR A . n A 1 78 ALA 78 77 77 ALA ALA A . n A 1 79 VAL 79 78 78 VAL VAL A . n A 1 80 TRP 80 79 79 TRP TRP A . n A 1 81 HIS 81 80 80 HIS HIS A . n A 1 82 THR 82 81 81 THR THR A . n A 1 83 ALA 83 82 82 ALA ALA A . n A 1 84 THR 84 83 83 THR THR A . n A 1 85 ASN 85 84 84 ASN ASN A . n A 1 86 GLY 86 85 85 GLY GLY A . n A 1 87 ASP 87 86 86 ASP ASP A . n A 1 88 ASP 88 87 87 ASP ASP A . n A 1 89 HIS 89 88 88 HIS HIS A . n A 1 90 PRO 90 89 89 PRO PRO A . n A 1 91 TYR 91 90 90 TYR TYR A . n A 1 92 ASN 92 91 91 ASN ASN A . n A 1 93 LEU 93 92 92 LEU LEU A . n A 1 94 VAL 94 93 93 VAL VAL A . n A 1 95 CYS 95 94 94 CYS CYS A . n A 1 96 GLN 96 95 95 GLN GLN A . n A 1 97 ASN 97 96 96 ASN ASN A . n A 1 98 ASP 98 97 97 ASP ASP A . n A 1 99 GLY 99 98 98 GLY GLY A . n A 1 100 ASN 100 99 99 ASN ASN A . n A 1 101 LEU 101 100 100 LEU LEU A . n A 1 102 VAL 102 101 101 VAL VAL A . n A 1 103 VAL 103 102 102 VAL VAL A . n A 1 104 TYR 104 103 103 TYR TYR A . n A 1 105 ALA 105 104 104 ALA ALA A . n A 1 106 LYS 106 105 105 LYS LYS A . n A 1 107 GLY 107 106 106 GLY GLY A . n A 1 108 GLY 108 107 107 GLY GLY A . n A 1 109 LYS 109 108 108 LYS LYS A . n A 1 110 ALA 110 109 109 ALA ALA A . n A 1 111 VAL 111 110 110 VAL VAL A . n A 1 112 TRP 112 111 111 TRP TRP A . n A 1 113 HIS 113 112 112 HIS HIS A . n A 1 114 THR 114 113 113 THR THR A . n A 1 115 ASN 115 114 114 ASN ASN A . n A 1 116 THR 116 115 115 THR THR A . n A 1 117 ALA 117 116 116 ALA ALA A . n A 1 118 VAL 118 117 117 VAL VAL A . n A 1 119 VAL 119 118 118 VAL VAL A . n A 1 120 HIS 120 119 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 BMA 1 201 201 BMA BMA A . C 3 GOL 1 202 202 GOL GOL A . D 4 MAN 1 203 203 MAN MAN A . E 5 HOH 1 301 318 HOH HOH A . E 5 HOH 2 302 521 HOH HOH A . E 5 HOH 3 303 394 HOH HOH A . E 5 HOH 4 304 381 HOH HOH A . E 5 HOH 5 305 317 HOH HOH A . E 5 HOH 6 306 324 HOH HOH A . E 5 HOH 7 307 504 HOH HOH A . E 5 HOH 8 308 447 HOH HOH A . E 5 HOH 9 309 303 HOH HOH A . E 5 HOH 10 310 401 HOH HOH A . E 5 HOH 11 311 305 HOH HOH A . E 5 HOH 12 312 338 HOH HOH A . E 5 HOH 13 313 442 HOH HOH A . E 5 HOH 14 314 387 HOH HOH A . E 5 HOH 15 315 316 HOH HOH A . E 5 HOH 16 316 306 HOH HOH A . E 5 HOH 17 317 438 HOH HOH A . E 5 HOH 18 318 339 HOH HOH A . E 5 HOH 19 319 435 HOH HOH A . E 5 HOH 20 320 326 HOH HOH A . E 5 HOH 21 321 358 HOH HOH A . E 5 HOH 22 322 409 HOH HOH A . E 5 HOH 23 323 354 HOH HOH A . E 5 HOH 24 324 307 HOH HOH A . E 5 HOH 25 325 331 HOH HOH A . E 5 HOH 26 326 319 HOH HOH A . E 5 HOH 27 327 304 HOH HOH A . E 5 HOH 28 328 313 HOH HOH A . E 5 HOH 29 329 400 HOH HOH A . E 5 HOH 30 330 426 HOH HOH A . E 5 HOH 31 331 414 HOH HOH A . E 5 HOH 32 332 349 HOH HOH A . E 5 HOH 33 333 337 HOH HOH A . E 5 HOH 34 334 506 HOH HOH A . E 5 HOH 35 335 312 HOH HOH A . E 5 HOH 36 336 526 HOH HOH A . E 5 HOH 37 337 321 HOH HOH A . E 5 HOH 38 338 517 HOH HOH A . E 5 HOH 39 339 522 HOH HOH A . E 5 HOH 40 340 362 HOH HOH A . E 5 HOH 41 341 365 HOH HOH A . E 5 HOH 42 342 376 HOH HOH A . E 5 HOH 43 343 368 HOH HOH A . E 5 HOH 44 344 350 HOH HOH A . E 5 HOH 45 345 369 HOH HOH A . E 5 HOH 46 346 328 HOH HOH A . E 5 HOH 47 347 309 HOH HOH A . E 5 HOH 48 348 427 HOH HOH A . E 5 HOH 49 349 527 HOH HOH A . E 5 HOH 50 350 396 HOH HOH A . E 5 HOH 51 351 420 HOH HOH A . E 5 HOH 52 352 507 HOH HOH A . E 5 HOH 53 353 302 HOH HOH A . E 5 HOH 54 354 356 HOH HOH A . E 5 HOH 55 355 351 HOH HOH A . E 5 HOH 56 356 346 HOH HOH A . E 5 HOH 57 357 505 HOH HOH A . E 5 HOH 58 358 344 HOH HOH A . E 5 HOH 59 359 511 HOH HOH A . E 5 HOH 60 360 341 HOH HOH A . E 5 HOH 61 361 509 HOH HOH A . E 5 HOH 62 362 343 HOH HOH A . E 5 HOH 63 363 503 HOH HOH A . E 5 HOH 64 364 336 HOH HOH A . E 5 HOH 65 365 329 HOH HOH A . E 5 HOH 66 366 502 HOH HOH A . E 5 HOH 67 367 391 HOH HOH A . E 5 HOH 68 368 397 HOH HOH A . E 5 HOH 69 369 425 HOH HOH A . E 5 HOH 70 370 385 HOH HOH A . E 5 HOH 71 371 432 HOH HOH A . E 5 HOH 72 372 403 HOH HOH A . E 5 HOH 73 373 510 HOH HOH A . E 5 HOH 74 374 528 HOH HOH A . E 5 HOH 75 375 367 HOH HOH A . E 5 HOH 76 376 378 HOH HOH A . E 5 HOH 77 377 410 HOH HOH A . E 5 HOH 78 378 352 HOH HOH A . E 5 HOH 79 379 355 HOH HOH A . E 5 HOH 80 380 357 HOH HOH A . E 5 HOH 81 381 519 HOH HOH A . E 5 HOH 82 382 515 HOH HOH A . E 5 HOH 83 383 428 HOH HOH A . E 5 HOH 84 384 512 HOH HOH A . E 5 HOH 85 385 524 HOH HOH A . E 5 HOH 86 386 359 HOH HOH A . E 5 HOH 87 387 520 HOH HOH A . E 5 HOH 88 388 301 HOH HOH A . E 5 HOH 89 389 308 HOH HOH A . E 5 HOH 90 390 310 HOH HOH A . E 5 HOH 91 391 314 HOH HOH A . E 5 HOH 92 392 320 HOH HOH A . E 5 HOH 93 393 322 HOH HOH A . E 5 HOH 94 394 323 HOH HOH A . E 5 HOH 95 395 325 HOH HOH A . E 5 HOH 96 396 327 HOH HOH A . E 5 HOH 97 397 332 HOH HOH A . E 5 HOH 98 398 334 HOH HOH A . E 5 HOH 99 399 335 HOH HOH A . E 5 HOH 100 400 342 HOH HOH A . E 5 HOH 101 401 345 HOH HOH A . E 5 HOH 102 402 347 HOH HOH A . E 5 HOH 103 403 353 HOH HOH A . E 5 HOH 104 404 361 HOH HOH A . E 5 HOH 105 405 363 HOH HOH A . E 5 HOH 106 406 370 HOH HOH A . E 5 HOH 107 407 371 HOH HOH A . E 5 HOH 108 408 373 HOH HOH A . E 5 HOH 109 409 374 HOH HOH A . E 5 HOH 110 410 375 HOH HOH A . E 5 HOH 111 411 386 HOH HOH A . E 5 HOH 112 412 393 HOH HOH A . E 5 HOH 113 413 399 HOH HOH A . E 5 HOH 114 414 402 HOH HOH A . E 5 HOH 115 415 405 HOH HOH A . E 5 HOH 116 416 406 HOH HOH A . E 5 HOH 117 417 417 HOH HOH A . E 5 HOH 118 418 421 HOH HOH A . E 5 HOH 119 419 434 HOH HOH A . E 5 HOH 120 420 439 HOH HOH A . E 5 HOH 121 421 440 HOH HOH A . E 5 HOH 122 422 443 HOH HOH A . E 5 HOH 123 423 446 HOH HOH A . E 5 HOH 124 424 501 HOH HOH A . E 5 HOH 125 425 508 HOH HOH A . E 5 HOH 126 426 513 HOH HOH A . E 5 HOH 127 427 514 HOH HOH A . E 5 HOH 128 428 516 HOH HOH A . E 5 HOH 129 429 518 HOH HOH A . E 5 HOH 130 430 523 HOH HOH A . E 5 HOH 131 431 525 HOH HOH A . E 5 HOH 132 432 529 HOH HOH A . # _software.citation_id ? _software.classification refinement _software.compiler_name ? _software.compiler_version ? _software.contact_author ? _software.contact_author_email ? _software.date ? _software.description ? _software.dependencies ? _software.hardware ? _software.language ? _software.location ? _software.mods ? _software.name REFMAC _software.os ? _software.os_version ? _software.type ? _software.version 5.8.0071 _software.pdbx_ordinal 1 # _cell.entry_id 4TKC _cell.length_a 58.420 _cell.length_b 58.420 _cell.length_c 57.732 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4TKC _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 32 2 1' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 4TKC _exptl.crystals_number ? _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.17 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 43.27 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 5.6 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 298 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '0.5M Ammonium sulfate, 0.1M Sodium citrate tribasic dihydrate, 1.0M Lithium sulfate monohydrate, 5% 2-propanol, 0.2M mannose' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector CCD _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'RIGAKU SATURN A200' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2013-07-24 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.0 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'SAGA-LS BEAMLINE BL07' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 1.0 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline BL07 _diffrn_source.pdbx_synchrotron_site SAGA-LS # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 4TKC _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.29 _reflns.d_resolution_low 50.59 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 29101 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.9 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 10.59 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 7.2 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_R_split ? # _refine.aniso_B[1][1] 0.00 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] -0.00 _refine.aniso_B[2][2] 0.00 _refine.aniso_B[2][3] 0.00 _refine.aniso_B[3][3] -0.01 _refine.B_iso_max ? _refine.B_iso_mean 19.540 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc 0.976 _refine.correlation_coeff_Fo_to_Fc_free 0.964 _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 4TKC _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 1.29 _refine.ls_d_res_low 50.59 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 27627 _refine.ls_number_reflns_R_free 1469 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.90 _refine.ls_percent_reflns_R_free 5.0 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.16164 _refine.ls_R_factor_R_free 0.20688 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.15937 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details MASK _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct ? _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R 0.051 _refine.pdbx_overall_ESU_R_Free 0.053 _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B 3.482 _refine.overall_SU_ML 0.058 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id 1 _refine_hist.pdbx_number_atoms_protein 905 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 30 _refine_hist.number_atoms_solvent 132 _refine_hist.number_atoms_total 1067 _refine_hist.d_res_high 1.29 _refine_hist.d_res_low 50.59 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.013 0.019 956 ? r_bond_refined_d ? ? 'X-RAY DIFFRACTION' ? 0.002 0.020 858 ? r_bond_other_d ? ? 'X-RAY DIFFRACTION' ? 1.587 1.946 1303 ? r_angle_refined_deg ? ? 'X-RAY DIFFRACTION' ? 0.740 3.000 1961 ? r_angle_other_deg ? ? 'X-RAY DIFFRACTION' ? 7.812 5.000 117 ? r_dihedral_angle_1_deg ? ? 'X-RAY DIFFRACTION' ? 31.753 24.783 46 ? r_dihedral_angle_2_deg ? ? 'X-RAY DIFFRACTION' ? 10.863 15.000 134 ? r_dihedral_angle_3_deg ? ? 'X-RAY DIFFRACTION' ? 13.330 15.000 4 ? r_dihedral_angle_4_deg ? ? 'X-RAY DIFFRACTION' ? 0.100 0.200 147 ? r_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.016 0.020 1096 ? r_gen_planes_refined ? ? 'X-RAY DIFFRACTION' ? 0.002 0.020 228 ? r_gen_planes_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbd_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbd_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbtor_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbtor_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_xyhbond_nbd_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_xyhbond_nbd_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_metal_ion_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_metal_ion_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_vdw_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_vdw_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_hbond_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_hbond_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_metal_ion_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_metal_ion_other ? ? 'X-RAY DIFFRACTION' ? 3.080 1.706 471 ? r_mcbond_it ? ? 'X-RAY DIFFRACTION' ? 2.899 1.701 470 ? r_mcbond_other ? ? 'X-RAY DIFFRACTION' ? 3.215 2.575 587 ? r_mcangle_it ? ? 'X-RAY DIFFRACTION' ? 3.246 2.578 588 ? r_mcangle_other ? ? 'X-RAY DIFFRACTION' ? 4.613 2.034 485 ? r_scbond_it ? ? 'X-RAY DIFFRACTION' ? 4.608 2.035 486 ? r_scbond_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_scangle_it ? ? 'X-RAY DIFFRACTION' ? 5.728 2.943 717 ? r_scangle_other ? ? 'X-RAY DIFFRACTION' ? 5.377 16.251 1143 ? r_long_range_B_refined ? ? 'X-RAY DIFFRACTION' ? 5.376 16.245 1143 ? r_long_range_B_other ? ? 'X-RAY DIFFRACTION' ? 8.196 3.000 1814 ? r_rigid_bond_restr ? ? 'X-RAY DIFFRACTION' ? 61.362 5.000 35 ? r_sphericity_free ? ? 'X-RAY DIFFRACTION' ? 19.661 5.000 1890 ? r_sphericity_bonded ? ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.d_res_high 1.290 _refine_ls_shell.d_res_low 1.323 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.number_reflns_R_free 97 _refine_ls_shell.number_reflns_R_work 2045 _refine_ls_shell.percent_reflns_obs 100.00 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_obs ? _refine_ls_shell.R_factor_R_free 0.349 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.R_factor_R_work 0.252 _refine_ls_shell.redundancy_reflns_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.wR_factor_all ? _refine_ls_shell.wR_factor_obs ? _refine_ls_shell.wR_factor_R_free ? _refine_ls_shell.wR_factor_R_work ? _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.pdbx_phase_error ? # _struct.entry_id 4TKC _struct.title 'Japanese Marasmius oreades lectin complexed with mannose' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag ? # _struct_keywords.entry_id 4TKC _struct_keywords.text 'mannose, fungal lectin, mannose binding motif, SUGAR BINDING PROTEIN' _struct_keywords.pdbx_keywords 'SUGAR BINDING PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code I7H471_9AGAR _struct_ref.pdbx_db_accession I7H471 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MSYVHPYGSTLPENGVIGRGYALISDSGRVEFRVTDEGNIQLFLDDSRKLWSVDGKNASFVKMQTDGNCVGYDPNGTAVW HTATNGDDHPYNLVCQNDGNLVVYAKGGKAVWHTNTAVVH ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 4TKC _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 120 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession I7H471 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 120 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 0 _struct_ref_seq.pdbx_auth_seq_align_end 119 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 2660 ? 1 MORE -0 ? 1 'SSA (A^2)' 10190 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 4_556 y,x,-z+1 -0.5000000000 0.8660254038 0.0000000000 0.0000000000 0.8660254038 0.5000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 57.7320000000 # _struct_conf.conf_type_id HELX_P _struct_conf.id HELX_P1 _struct_conf.pdbx_PDB_helix_id AA1 _struct_conf.beg_label_comp_id LYS _struct_conf.beg_label_asym_id A _struct_conf.beg_label_seq_id 106 _struct_conf.pdbx_beg_PDB_ins_code ? _struct_conf.end_label_comp_id GLY _struct_conf.end_label_asym_id A _struct_conf.end_label_seq_id 108 _struct_conf.pdbx_end_PDB_ins_code ? _struct_conf.beg_auth_comp_id LYS _struct_conf.beg_auth_asym_id A _struct_conf.beg_auth_seq_id 105 _struct_conf.end_auth_comp_id GLY _struct_conf.end_auth_asym_id A _struct_conf.end_auth_seq_id 107 _struct_conf.pdbx_PDB_helix_class 5 _struct_conf.details ? _struct_conf.pdbx_PDB_helix_length 3 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id HIS _struct_mon_prot_cis.label_seq_id 89 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id HIS _struct_mon_prot_cis.auth_seq_id 88 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 90 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 89 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle 0.87 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 4 ? AA2 ? 4 ? AA3 ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA2 1 2 ? anti-parallel AA2 2 3 ? anti-parallel AA2 3 4 ? anti-parallel AA3 1 2 ? anti-parallel AA3 2 3 ? anti-parallel AA3 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 THR A 10 ? PRO A 12 ? THR A 9 PRO A 11 AA1 2 ASN A 92 ? CYS A 95 ? ASN A 91 CYS A 94 AA1 3 LEU A 101 ? ALA A 105 ? LEU A 100 ALA A 104 AA1 4 LYS A 109 ? HIS A 113 ? LYS A 108 HIS A 112 AA2 1 GLY A 15 ? GLY A 18 ? GLY A 14 GLY A 17 AA2 2 PHE A 60 ? MET A 63 ? PHE A 59 MET A 62 AA2 3 CYS A 69 ? TYR A 72 ? CYS A 68 TYR A 71 AA2 4 ALA A 78 ? HIS A 81 ? ALA A 77 HIS A 80 AA3 1 TYR A 21 ? ILE A 24 ? TYR A 20 ILE A 23 AA3 2 VAL A 30 ? VAL A 34 ? VAL A 29 VAL A 33 AA3 3 ILE A 40 ? LEU A 44 ? ILE A 39 LEU A 43 AA3 4 ARG A 48 ? VAL A 53 ? ARG A 47 VAL A 52 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N LEU A 11 ? N LEU A 10 O LEU A 93 ? O LEU A 92 AA1 2 3 N VAL A 94 ? N VAL A 93 O VAL A 102 ? O VAL A 101 AA1 3 4 N ALA A 105 ? N ALA A 104 O LYS A 109 ? O LYS A 108 AA2 1 2 N ILE A 17 ? N ILE A 16 O VAL A 61 ? O VAL A 60 AA2 2 3 N PHE A 60 ? N PHE A 59 O TYR A 72 ? O TYR A 71 AA2 3 4 N GLY A 71 ? N GLY A 70 O VAL A 79 ? O VAL A 78 AA3 1 2 N LEU A 23 ? N LEU A 22 O PHE A 32 ? O PHE A 31 AA3 2 3 N ARG A 33 ? N ARG A 32 O GLN A 41 ? O GLN A 40 AA3 3 4 N LEU A 42 ? N LEU A 41 O TRP A 51 ? O TRP A 50 # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 NE _pdbx_validate_rmsd_angle.auth_asym_id_1 A _pdbx_validate_rmsd_angle.auth_comp_id_1 ARG _pdbx_validate_rmsd_angle.auth_seq_id_1 28 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 CZ _pdbx_validate_rmsd_angle.auth_asym_id_2 A _pdbx_validate_rmsd_angle.auth_comp_id_2 ARG _pdbx_validate_rmsd_angle.auth_seq_id_2 28 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 NH2 _pdbx_validate_rmsd_angle.auth_asym_id_3 A _pdbx_validate_rmsd_angle.auth_comp_id_3 ARG _pdbx_validate_rmsd_angle.auth_seq_id_3 28 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 116.90 _pdbx_validate_rmsd_angle.angle_target_value 120.30 _pdbx_validate_rmsd_angle.angle_deviation -3.40 _pdbx_validate_rmsd_angle.angle_standard_deviation 0.50 _pdbx_validate_rmsd_angle.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER A 46 ? ? -138.65 -46.12 2 1 THR A 115 ? ? -140.11 38.77 # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 A HOH 306 ? E HOH . 2 1 A HOH 311 ? E HOH . # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 0 ? A MET 1 2 1 Y 1 A HIS 119 ? A HIS 120 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 BMA C1 C N R 74 BMA C2 C N S 75 BMA C3 C N S 76 BMA C4 C N S 77 BMA C5 C N R 78 BMA C6 C N N 79 BMA O1 O N N 80 BMA O2 O N N 81 BMA O3 O N N 82 BMA O4 O N N 83 BMA O5 O N N 84 BMA O6 O N N 85 BMA H1 H N N 86 BMA H2 H N N 87 BMA H3 H N N 88 BMA H4 H N N 89 BMA H5 H N N 90 BMA H61 H N N 91 BMA H62 H N N 92 BMA HO1 H N N 93 BMA HO2 H N N 94 BMA HO3 H N N 95 BMA HO4 H N N 96 BMA HO6 H N N 97 CYS N N N N 98 CYS CA C N R 99 CYS C C N N 100 CYS O O N N 101 CYS CB C N N 102 CYS SG S N N 103 CYS OXT O N N 104 CYS H H N N 105 CYS H2 H N N 106 CYS HA H N N 107 CYS HB2 H N N 108 CYS HB3 H N N 109 CYS HG H N N 110 CYS HXT H N N 111 GLN N N N N 112 GLN CA C N S 113 GLN C C N N 114 GLN O O N N 115 GLN CB C N N 116 GLN CG C N N 117 GLN CD C N N 118 GLN OE1 O N N 119 GLN NE2 N N N 120 GLN OXT O N N 121 GLN H H N N 122 GLN H2 H N N 123 GLN HA H N N 124 GLN HB2 H N N 125 GLN HB3 H N N 126 GLN HG2 H N N 127 GLN HG3 H N N 128 GLN HE21 H N N 129 GLN HE22 H N N 130 GLN HXT H N N 131 GLU N N N N 132 GLU CA C N S 133 GLU C C N N 134 GLU O O N N 135 GLU CB C N N 136 GLU CG C N N 137 GLU CD C N N 138 GLU OE1 O N N 139 GLU OE2 O N N 140 GLU OXT O N N 141 GLU H H N N 142 GLU H2 H N N 143 GLU HA H N N 144 GLU HB2 H N N 145 GLU HB3 H N N 146 GLU HG2 H N N 147 GLU HG3 H N N 148 GLU HE2 H N N 149 GLU HXT H N N 150 GLY N N N N 151 GLY CA C N N 152 GLY C C N N 153 GLY O O N N 154 GLY OXT O N N 155 GLY H H N N 156 GLY H2 H N N 157 GLY HA2 H N N 158 GLY HA3 H N N 159 GLY HXT H N N 160 GOL C1 C N N 161 GOL O1 O N N 162 GOL C2 C N N 163 GOL O2 O N N 164 GOL C3 C N N 165 GOL O3 O N N 166 GOL H11 H N N 167 GOL H12 H N N 168 GOL HO1 H N N 169 GOL H2 H N N 170 GOL HO2 H N N 171 GOL H31 H N N 172 GOL H32 H N N 173 GOL HO3 H N N 174 HIS N N N N 175 HIS CA C N S 176 HIS C C N N 177 HIS O O N N 178 HIS CB C N N 179 HIS CG C Y N 180 HIS ND1 N Y N 181 HIS CD2 C Y N 182 HIS CE1 C Y N 183 HIS NE2 N Y N 184 HIS OXT O N N 185 HIS H H N N 186 HIS H2 H N N 187 HIS HA H N N 188 HIS HB2 H N N 189 HIS HB3 H N N 190 HIS HD1 H N N 191 HIS HD2 H N N 192 HIS HE1 H N N 193 HIS HE2 H N N 194 HIS HXT H N N 195 HOH O O N N 196 HOH H1 H N N 197 HOH H2 H N N 198 ILE N N N N 199 ILE CA C N S 200 ILE C C N N 201 ILE O O N N 202 ILE CB C N S 203 ILE CG1 C N N 204 ILE CG2 C N N 205 ILE CD1 C N N 206 ILE OXT O N N 207 ILE H H N N 208 ILE H2 H N N 209 ILE HA H N N 210 ILE HB H N N 211 ILE HG12 H N N 212 ILE HG13 H N N 213 ILE HG21 H N N 214 ILE HG22 H N N 215 ILE HG23 H N N 216 ILE HD11 H N N 217 ILE HD12 H N N 218 ILE HD13 H N N 219 ILE HXT H N N 220 LEU N N N N 221 LEU CA C N S 222 LEU C C N N 223 LEU O O N N 224 LEU CB C N N 225 LEU CG C N N 226 LEU CD1 C N N 227 LEU CD2 C N N 228 LEU OXT O N N 229 LEU H H N N 230 LEU H2 H N N 231 LEU HA H N N 232 LEU HB2 H N N 233 LEU HB3 H N N 234 LEU HG H N N 235 LEU HD11 H N N 236 LEU HD12 H N N 237 LEU HD13 H N N 238 LEU HD21 H N N 239 LEU HD22 H N N 240 LEU HD23 H N N 241 LEU HXT H N N 242 LYS N N N N 243 LYS CA C N S 244 LYS C C N N 245 LYS O O N N 246 LYS CB C N N 247 LYS CG C N N 248 LYS CD C N N 249 LYS CE C N N 250 LYS NZ N N N 251 LYS OXT O N N 252 LYS H H N N 253 LYS H2 H N N 254 LYS HA H N N 255 LYS HB2 H N N 256 LYS HB3 H N N 257 LYS HG2 H N N 258 LYS HG3 H N N 259 LYS HD2 H N N 260 LYS HD3 H N N 261 LYS HE2 H N N 262 LYS HE3 H N N 263 LYS HZ1 H N N 264 LYS HZ2 H N N 265 LYS HZ3 H N N 266 LYS HXT H N N 267 MAN C1 C N S 268 MAN C2 C N S 269 MAN C3 C N S 270 MAN C4 C N S 271 MAN C5 C N R 272 MAN C6 C N N 273 MAN O1 O N N 274 MAN O2 O N N 275 MAN O3 O N N 276 MAN O4 O N N 277 MAN O5 O N N 278 MAN O6 O N N 279 MAN H1 H N N 280 MAN H2 H N N 281 MAN H3 H N N 282 MAN H4 H N N 283 MAN H5 H N N 284 MAN H61 H N N 285 MAN H62 H N N 286 MAN HO1 H N N 287 MAN HO2 H N N 288 MAN HO3 H N N 289 MAN HO4 H N N 290 MAN HO6 H N N 291 MET N N N N 292 MET CA C N S 293 MET C C N N 294 MET O O N N 295 MET CB C N N 296 MET CG C N N 297 MET SD S N N 298 MET CE C N N 299 MET OXT O N N 300 MET H H N N 301 MET H2 H N N 302 MET HA H N N 303 MET HB2 H N N 304 MET HB3 H N N 305 MET HG2 H N N 306 MET HG3 H N N 307 MET HE1 H N N 308 MET HE2 H N N 309 MET HE3 H N N 310 MET HXT H N N 311 PHE N N N N 312 PHE CA C N S 313 PHE C C N N 314 PHE O O N N 315 PHE CB C N N 316 PHE CG C Y N 317 PHE CD1 C Y N 318 PHE CD2 C Y N 319 PHE CE1 C Y N 320 PHE CE2 C Y N 321 PHE CZ C Y N 322 PHE OXT O N N 323 PHE H H N N 324 PHE H2 H N N 325 PHE HA H N N 326 PHE HB2 H N N 327 PHE HB3 H N N 328 PHE HD1 H N N 329 PHE HD2 H N N 330 PHE HE1 H N N 331 PHE HE2 H N N 332 PHE HZ H N N 333 PHE HXT H N N 334 PRO N N N N 335 PRO CA C N S 336 PRO C C N N 337 PRO O O N N 338 PRO CB C N N 339 PRO CG C N N 340 PRO CD C N N 341 PRO OXT O N N 342 PRO H H N N 343 PRO HA H N N 344 PRO HB2 H N N 345 PRO HB3 H N N 346 PRO HG2 H N N 347 PRO HG3 H N N 348 PRO HD2 H N N 349 PRO HD3 H N N 350 PRO HXT H N N 351 SER N N N N 352 SER CA C N S 353 SER C C N N 354 SER O O N N 355 SER CB C N N 356 SER OG O N N 357 SER OXT O N N 358 SER H H N N 359 SER H2 H N N 360 SER HA H N N 361 SER HB2 H N N 362 SER HB3 H N N 363 SER HG H N N 364 SER HXT H N N 365 THR N N N N 366 THR CA C N S 367 THR C C N N 368 THR O O N N 369 THR CB C N R 370 THR OG1 O N N 371 THR CG2 C N N 372 THR OXT O N N 373 THR H H N N 374 THR H2 H N N 375 THR HA H N N 376 THR HB H N N 377 THR HG1 H N N 378 THR HG21 H N N 379 THR HG22 H N N 380 THR HG23 H N N 381 THR HXT H N N 382 TRP N N N N 383 TRP CA C N S 384 TRP C C N N 385 TRP O O N N 386 TRP CB C N N 387 TRP CG C Y N 388 TRP CD1 C Y N 389 TRP CD2 C Y N 390 TRP NE1 N Y N 391 TRP CE2 C Y N 392 TRP CE3 C Y N 393 TRP CZ2 C Y N 394 TRP CZ3 C Y N 395 TRP CH2 C Y N 396 TRP OXT O N N 397 TRP H H N N 398 TRP H2 H N N 399 TRP HA H N N 400 TRP HB2 H N N 401 TRP HB3 H N N 402 TRP HD1 H N N 403 TRP HE1 H N N 404 TRP HE3 H N N 405 TRP HZ2 H N N 406 TRP HZ3 H N N 407 TRP HH2 H N N 408 TRP HXT H N N 409 TYR N N N N 410 TYR CA C N S 411 TYR C C N N 412 TYR O O N N 413 TYR CB C N N 414 TYR CG C Y N 415 TYR CD1 C Y N 416 TYR CD2 C Y N 417 TYR CE1 C Y N 418 TYR CE2 C Y N 419 TYR CZ C Y N 420 TYR OH O N N 421 TYR OXT O N N 422 TYR H H N N 423 TYR H2 H N N 424 TYR HA H N N 425 TYR HB2 H N N 426 TYR HB3 H N N 427 TYR HD1 H N N 428 TYR HD2 H N N 429 TYR HE1 H N N 430 TYR HE2 H N N 431 TYR HH H N N 432 TYR HXT H N N 433 VAL N N N N 434 VAL CA C N S 435 VAL C C N N 436 VAL O O N N 437 VAL CB C N N 438 VAL CG1 C N N 439 VAL CG2 C N N 440 VAL OXT O N N 441 VAL H H N N 442 VAL H2 H N N 443 VAL HA H N N 444 VAL HB H N N 445 VAL HG11 H N N 446 VAL HG12 H N N 447 VAL HG13 H N N 448 VAL HG21 H N N 449 VAL HG22 H N N 450 VAL HG23 H N N 451 VAL HXT H N N 452 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 BMA C1 C2 sing N N 70 BMA C1 O1 sing N N 71 BMA C1 O5 sing N N 72 BMA C1 H1 sing N N 73 BMA C2 C3 sing N N 74 BMA C2 O2 sing N N 75 BMA C2 H2 sing N N 76 BMA C3 C4 sing N N 77 BMA C3 O3 sing N N 78 BMA C3 H3 sing N N 79 BMA C4 C5 sing N N 80 BMA C4 O4 sing N N 81 BMA C4 H4 sing N N 82 BMA C5 C6 sing N N 83 BMA C5 O5 sing N N 84 BMA C5 H5 sing N N 85 BMA C6 O6 sing N N 86 BMA C6 H61 sing N N 87 BMA C6 H62 sing N N 88 BMA O1 HO1 sing N N 89 BMA O2 HO2 sing N N 90 BMA O3 HO3 sing N N 91 BMA O4 HO4 sing N N 92 BMA O6 HO6 sing N N 93 CYS N CA sing N N 94 CYS N H sing N N 95 CYS N H2 sing N N 96 CYS CA C sing N N 97 CYS CA CB sing N N 98 CYS CA HA sing N N 99 CYS C O doub N N 100 CYS C OXT sing N N 101 CYS CB SG sing N N 102 CYS CB HB2 sing N N 103 CYS CB HB3 sing N N 104 CYS SG HG sing N N 105 CYS OXT HXT sing N N 106 GLN N CA sing N N 107 GLN N H sing N N 108 GLN N H2 sing N N 109 GLN CA C sing N N 110 GLN CA CB sing N N 111 GLN CA HA sing N N 112 GLN C O doub N N 113 GLN C OXT sing N N 114 GLN CB CG sing N N 115 GLN CB HB2 sing N N 116 GLN CB HB3 sing N N 117 GLN CG CD sing N N 118 GLN CG HG2 sing N N 119 GLN CG HG3 sing N N 120 GLN CD OE1 doub N N 121 GLN CD NE2 sing N N 122 GLN NE2 HE21 sing N N 123 GLN NE2 HE22 sing N N 124 GLN OXT HXT sing N N 125 GLU N CA sing N N 126 GLU N H sing N N 127 GLU N H2 sing N N 128 GLU CA C sing N N 129 GLU CA CB sing N N 130 GLU CA HA sing N N 131 GLU C O doub N N 132 GLU C OXT sing N N 133 GLU CB CG sing N N 134 GLU CB HB2 sing N N 135 GLU CB HB3 sing N N 136 GLU CG CD sing N N 137 GLU CG HG2 sing N N 138 GLU CG HG3 sing N N 139 GLU CD OE1 doub N N 140 GLU CD OE2 sing N N 141 GLU OE2 HE2 sing N N 142 GLU OXT HXT sing N N 143 GLY N CA sing N N 144 GLY N H sing N N 145 GLY N H2 sing N N 146 GLY CA C sing N N 147 GLY CA HA2 sing N N 148 GLY CA HA3 sing N N 149 GLY C O doub N N 150 GLY C OXT sing N N 151 GLY OXT HXT sing N N 152 GOL C1 O1 sing N N 153 GOL C1 C2 sing N N 154 GOL C1 H11 sing N N 155 GOL C1 H12 sing N N 156 GOL O1 HO1 sing N N 157 GOL C2 O2 sing N N 158 GOL C2 C3 sing N N 159 GOL C2 H2 sing N N 160 GOL O2 HO2 sing N N 161 GOL C3 O3 sing N N 162 GOL C3 H31 sing N N 163 GOL C3 H32 sing N N 164 GOL O3 HO3 sing N N 165 HIS N CA sing N N 166 HIS N H sing N N 167 HIS N H2 sing N N 168 HIS CA C sing N N 169 HIS CA CB sing N N 170 HIS CA HA sing N N 171 HIS C O doub N N 172 HIS C OXT sing N N 173 HIS CB CG sing N N 174 HIS CB HB2 sing N N 175 HIS CB HB3 sing N N 176 HIS CG ND1 sing Y N 177 HIS CG CD2 doub Y N 178 HIS ND1 CE1 doub Y N 179 HIS ND1 HD1 sing N N 180 HIS CD2 NE2 sing Y N 181 HIS CD2 HD2 sing N N 182 HIS CE1 NE2 sing Y N 183 HIS CE1 HE1 sing N N 184 HIS NE2 HE2 sing N N 185 HIS OXT HXT sing N N 186 HOH O H1 sing N N 187 HOH O H2 sing N N 188 ILE N CA sing N N 189 ILE N H sing N N 190 ILE N H2 sing N N 191 ILE CA C sing N N 192 ILE CA CB sing N N 193 ILE CA HA sing N N 194 ILE C O doub N N 195 ILE C OXT sing N N 196 ILE CB CG1 sing N N 197 ILE CB CG2 sing N N 198 ILE CB HB sing N N 199 ILE CG1 CD1 sing N N 200 ILE CG1 HG12 sing N N 201 ILE CG1 HG13 sing N N 202 ILE CG2 HG21 sing N N 203 ILE CG2 HG22 sing N N 204 ILE CG2 HG23 sing N N 205 ILE CD1 HD11 sing N N 206 ILE CD1 HD12 sing N N 207 ILE CD1 HD13 sing N N 208 ILE OXT HXT sing N N 209 LEU N CA sing N N 210 LEU N H sing N N 211 LEU N H2 sing N N 212 LEU CA C sing N N 213 LEU CA CB sing N N 214 LEU CA HA sing N N 215 LEU C O doub N N 216 LEU C OXT sing N N 217 LEU CB CG sing N N 218 LEU CB HB2 sing N N 219 LEU CB HB3 sing N N 220 LEU CG CD1 sing N N 221 LEU CG CD2 sing N N 222 LEU CG HG sing N N 223 LEU CD1 HD11 sing N N 224 LEU CD1 HD12 sing N N 225 LEU CD1 HD13 sing N N 226 LEU CD2 HD21 sing N N 227 LEU CD2 HD22 sing N N 228 LEU CD2 HD23 sing N N 229 LEU OXT HXT sing N N 230 LYS N CA sing N N 231 LYS N H sing N N 232 LYS N H2 sing N N 233 LYS CA C sing N N 234 LYS CA CB sing N N 235 LYS CA HA sing N N 236 LYS C O doub N N 237 LYS C OXT sing N N 238 LYS CB CG sing N N 239 LYS CB HB2 sing N N 240 LYS CB HB3 sing N N 241 LYS CG CD sing N N 242 LYS CG HG2 sing N N 243 LYS CG HG3 sing N N 244 LYS CD CE sing N N 245 LYS CD HD2 sing N N 246 LYS CD HD3 sing N N 247 LYS CE NZ sing N N 248 LYS CE HE2 sing N N 249 LYS CE HE3 sing N N 250 LYS NZ HZ1 sing N N 251 LYS NZ HZ2 sing N N 252 LYS NZ HZ3 sing N N 253 LYS OXT HXT sing N N 254 MAN C1 C2 sing N N 255 MAN C1 O1 sing N N 256 MAN C1 O5 sing N N 257 MAN C1 H1 sing N N 258 MAN C2 C3 sing N N 259 MAN C2 O2 sing N N 260 MAN C2 H2 sing N N 261 MAN C3 C4 sing N N 262 MAN C3 O3 sing N N 263 MAN C3 H3 sing N N 264 MAN C4 C5 sing N N 265 MAN C4 O4 sing N N 266 MAN C4 H4 sing N N 267 MAN C5 C6 sing N N 268 MAN C5 O5 sing N N 269 MAN C5 H5 sing N N 270 MAN C6 O6 sing N N 271 MAN C6 H61 sing N N 272 MAN C6 H62 sing N N 273 MAN O1 HO1 sing N N 274 MAN O2 HO2 sing N N 275 MAN O3 HO3 sing N N 276 MAN O4 HO4 sing N N 277 MAN O6 HO6 sing N N 278 MET N CA sing N N 279 MET N H sing N N 280 MET N H2 sing N N 281 MET CA C sing N N 282 MET CA CB sing N N 283 MET CA HA sing N N 284 MET C O doub N N 285 MET C OXT sing N N 286 MET CB CG sing N N 287 MET CB HB2 sing N N 288 MET CB HB3 sing N N 289 MET CG SD sing N N 290 MET CG HG2 sing N N 291 MET CG HG3 sing N N 292 MET SD CE sing N N 293 MET CE HE1 sing N N 294 MET CE HE2 sing N N 295 MET CE HE3 sing N N 296 MET OXT HXT sing N N 297 PHE N CA sing N N 298 PHE N H sing N N 299 PHE N H2 sing N N 300 PHE CA C sing N N 301 PHE CA CB sing N N 302 PHE CA HA sing N N 303 PHE C O doub N N 304 PHE C OXT sing N N 305 PHE CB CG sing N N 306 PHE CB HB2 sing N N 307 PHE CB HB3 sing N N 308 PHE CG CD1 doub Y N 309 PHE CG CD2 sing Y N 310 PHE CD1 CE1 sing Y N 311 PHE CD1 HD1 sing N N 312 PHE CD2 CE2 doub Y N 313 PHE CD2 HD2 sing N N 314 PHE CE1 CZ doub Y N 315 PHE CE1 HE1 sing N N 316 PHE CE2 CZ sing Y N 317 PHE CE2 HE2 sing N N 318 PHE CZ HZ sing N N 319 PHE OXT HXT sing N N 320 PRO N CA sing N N 321 PRO N CD sing N N 322 PRO N H sing N N 323 PRO CA C sing N N 324 PRO CA CB sing N N 325 PRO CA HA sing N N 326 PRO C O doub N N 327 PRO C OXT sing N N 328 PRO CB CG sing N N 329 PRO CB HB2 sing N N 330 PRO CB HB3 sing N N 331 PRO CG CD sing N N 332 PRO CG HG2 sing N N 333 PRO CG HG3 sing N N 334 PRO CD HD2 sing N N 335 PRO CD HD3 sing N N 336 PRO OXT HXT sing N N 337 SER N CA sing N N 338 SER N H sing N N 339 SER N H2 sing N N 340 SER CA C sing N N 341 SER CA CB sing N N 342 SER CA HA sing N N 343 SER C O doub N N 344 SER C OXT sing N N 345 SER CB OG sing N N 346 SER CB HB2 sing N N 347 SER CB HB3 sing N N 348 SER OG HG sing N N 349 SER OXT HXT sing N N 350 THR N CA sing N N 351 THR N H sing N N 352 THR N H2 sing N N 353 THR CA C sing N N 354 THR CA CB sing N N 355 THR CA HA sing N N 356 THR C O doub N N 357 THR C OXT sing N N 358 THR CB OG1 sing N N 359 THR CB CG2 sing N N 360 THR CB HB sing N N 361 THR OG1 HG1 sing N N 362 THR CG2 HG21 sing N N 363 THR CG2 HG22 sing N N 364 THR CG2 HG23 sing N N 365 THR OXT HXT sing N N 366 TRP N CA sing N N 367 TRP N H sing N N 368 TRP N H2 sing N N 369 TRP CA C sing N N 370 TRP CA CB sing N N 371 TRP CA HA sing N N 372 TRP C O doub N N 373 TRP C OXT sing N N 374 TRP CB CG sing N N 375 TRP CB HB2 sing N N 376 TRP CB HB3 sing N N 377 TRP CG CD1 doub Y N 378 TRP CG CD2 sing Y N 379 TRP CD1 NE1 sing Y N 380 TRP CD1 HD1 sing N N 381 TRP CD2 CE2 doub Y N 382 TRP CD2 CE3 sing Y N 383 TRP NE1 CE2 sing Y N 384 TRP NE1 HE1 sing N N 385 TRP CE2 CZ2 sing Y N 386 TRP CE3 CZ3 doub Y N 387 TRP CE3 HE3 sing N N 388 TRP CZ2 CH2 doub Y N 389 TRP CZ2 HZ2 sing N N 390 TRP CZ3 CH2 sing Y N 391 TRP CZ3 HZ3 sing N N 392 TRP CH2 HH2 sing N N 393 TRP OXT HXT sing N N 394 TYR N CA sing N N 395 TYR N H sing N N 396 TYR N H2 sing N N 397 TYR CA C sing N N 398 TYR CA CB sing N N 399 TYR CA HA sing N N 400 TYR C O doub N N 401 TYR C OXT sing N N 402 TYR CB CG sing N N 403 TYR CB HB2 sing N N 404 TYR CB HB3 sing N N 405 TYR CG CD1 doub Y N 406 TYR CG CD2 sing Y N 407 TYR CD1 CE1 sing Y N 408 TYR CD1 HD1 sing N N 409 TYR CD2 CE2 doub Y N 410 TYR CD2 HD2 sing N N 411 TYR CE1 CZ doub Y N 412 TYR CE1 HE1 sing N N 413 TYR CE2 CZ sing Y N 414 TYR CE2 HE2 sing N N 415 TYR CZ OH sing N N 416 TYR OH HH sing N N 417 TYR OXT HXT sing N N 418 VAL N CA sing N N 419 VAL N H sing N N 420 VAL N H2 sing N N 421 VAL CA C sing N N 422 VAL CA CB sing N N 423 VAL CA HA sing N N 424 VAL C O doub N N 425 VAL C OXT sing N N 426 VAL CB CG1 sing N N 427 VAL CB CG2 sing N N 428 VAL CB HB sing N N 429 VAL CG1 HG11 sing N N 430 VAL CG1 HG12 sing N N 431 VAL CG1 HG13 sing N N 432 VAL CG2 HG21 sing N N 433 VAL CG2 HG22 sing N N 434 VAL CG2 HG23 sing N N 435 VAL OXT HXT sing N N 436 # _atom_sites.entry_id 4TKC _atom_sites.fract_transf_matrix[1][1] 0.017118 _atom_sites.fract_transf_matrix[1][2] 0.009883 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] -0.000000 _atom_sites.fract_transf_matrix[2][2] 0.019766 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] -0.000000 _atom_sites.fract_transf_matrix[3][3] 0.017321 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_