HEADER PHOTOSYNTHESIS 11-JUN-14 4TQQ TITLE PHOTOSYNTHETIC REACTION CENTER FROM R. SPHAEROIDES ANALYZED AT ROOM TITLE 2 TEMPERATURE ON AN X-RAY TRANSPARENT MICROFLUIDIC CHIP COMPND MOL_ID: 1; COMPND 2 MOLECULE: REACTION CENTER PROTEIN H CHAIN; COMPND 3 CHAIN: H; COMPND 4 SYNONYM: PHOTOSYNTHETIC REACTION CENTER H SUBUNIT; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: REACTION CENTER PROTEIN L CHAIN; COMPND 7 CHAIN: L; COMPND 8 SYNONYM: PHOTOSYNTHETIC REACTION CENTER L SUBUNIT; COMPND 9 MOL_ID: 3; COMPND 10 MOLECULE: REACTION CENTER PROTEIN M CHAIN; COMPND 11 CHAIN: M; COMPND 12 SYNONYM: PHOTOSYNTHETIC REACTION CENTER M SUBUNIT SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: RHODOBACTER SPHAEROIDES; SOURCE 3 ORGANISM_TAXID: 1063; SOURCE 4 MOL_ID: 2; SOURCE 5 ORGANISM_SCIENTIFIC: RHODOBACTER SPHAEROIDES; SOURCE 6 ORGANISM_TAXID: 1063; SOURCE 7 MOL_ID: 3; SOURCE 8 ORGANISM_SCIENTIFIC: RHODOBACTER SPHAEROIDES; SOURCE 9 ORGANISM_TAXID: 1063 KEYWDS PHOTOSYNTHETIC, MEMBRANE PROTEIN, PHOTOSYNTHESIS EXPDTA X-RAY DIFFRACTION AUTHOR J.M.SCHIEFERSTEIN,D.S.KHVOSTICHENKO,A.S.PAWATE,P.J.A.KENIS REVDAT 5 27-SEP-23 4TQQ 1 REMARK LINK REVDAT 4 25-DEC-19 4TQQ 1 REMARK REVDAT 3 13-SEP-17 4TQQ 1 SOURCE REMARK REVDAT 2 22-OCT-14 4TQQ 1 JRNL REVDAT 1 16-JUL-14 4TQQ 0 JRNL AUTH D.S.KHVOSTICHENKO,J.M.SCHIEFERSTEIN,A.S.PAWATE,P.D.LAIBLE, JRNL AUTH 2 P.J.KENIS JRNL TITL X-RAY TRANSPARENT MICROFLUIDIC CHIP FOR MESOPHASE-BASED JRNL TITL 2 CRYSTALLIZATION OF MEMBRANE PROTEINS AND ON-CHIP STRUCTURE JRNL TITL 3 DETERMINATION. JRNL REF CRYST.GROWTH DES. V. 14 4886 2014 JRNL REFN ISSN 1528-7483 JRNL PMID 25285049 JRNL DOI 10.1021/CG5011488 REMARK 2 REMARK 2 RESOLUTION. 2.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 42.81 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 95.8 REMARK 3 NUMBER OF REFLECTIONS : 43247 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.165 REMARK 3 R VALUE (WORKING SET) : 0.162 REMARK 3 FREE R VALUE : 0.213 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.430 REMARK 3 FREE R VALUE TEST SET COUNT : 1915 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 42.8205 - 6.0187 0.97 3245 151 0.1624 0.2319 REMARK 3 2 6.0187 - 4.7793 0.98 3137 146 0.1692 0.2236 REMARK 3 3 4.7793 - 4.1757 0.98 3076 144 0.1530 0.1884 REMARK 3 4 4.1757 - 3.7942 0.99 3035 142 0.1431 0.1756 REMARK 3 5 3.7942 - 3.5224 0.98 3023 141 0.1462 0.1944 REMARK 3 6 3.5224 - 3.3148 0.98 3015 141 0.1418 0.1945 REMARK 3 7 3.3148 - 3.1488 0.97 2967 135 0.1571 0.1833 REMARK 3 8 3.1488 - 3.0118 0.96 2928 137 0.1691 0.2245 REMARK 3 9 3.0118 - 2.8959 0.96 2915 136 0.1683 0.2352 REMARK 3 10 2.8959 - 2.7960 0.95 2887 130 0.1748 0.2289 REMARK 3 11 2.7960 - 2.7086 0.94 2843 133 0.1827 0.2406 REMARK 3 12 2.7086 - 2.6312 0.93 2786 129 0.1854 0.2987 REMARK 3 13 2.6312 - 2.5619 0.92 2787 123 0.1971 0.2502 REMARK 3 14 2.5619 - 2.4994 0.90 2688 127 0.2084 0.2514 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.230 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 20.140 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 35.62 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.010 7198 REMARK 3 ANGLE : 1.388 9889 REMARK 3 CHIRALITY : 0.054 1009 REMARK 3 PLANARITY : 0.008 1232 REMARK 3 DIHEDRAL : 12.906 2447 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4TQQ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 16-JUN-14. REMARK 100 THE DEPOSITION ID IS D_1000202094. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 18-DEC-12 REMARK 200 TEMPERATURE (KELVIN) : 298 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 21-ID-F REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97872 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 45251 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.499 REMARK 200 RESOLUTION RANGE LOW (A) : 42.814 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.8 REMARK 200 DATA REDUNDANCY : 4.000 REMARK 200 R MERGE (I) : 0.16500 REMARK 200 R SYM (I) : 0.16500 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 10.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.56 REMARK 200 COMPLETENESS FOR SHELL (%) : 90.0 REMARK 200 DATA REDUNDANCY IN SHELL : 3.20 REMARK 200 R MERGE FOR SHELL (I) : 0.62800 REMARK 200 R SYM FOR SHELL (I) : 0.62800 REMARK 200 <I/SIGMA(I)> FOR SHELL : 3.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: 2UWW REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 64.37 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.45 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PROTEIN INCORPORATED INTO LCP BY REMARK 280 DIFFUSION, INCUBATED FOR HOURS, CRYSTALLIZATION INDUCED BY REMARK 280 ADDITION OF JEFFAMINE M-600 AND AMMONIUM SULFATE, MICROFLUIDIC, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 42 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -Y+1/2,X+1/2,Z+1/2 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/2 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 51.24200 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 51.24200 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 119.96950 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 51.24200 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 51.24200 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 119.96950 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 51.24200 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 51.24200 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 119.96950 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 51.24200 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 51.24200 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 119.96950 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 30760 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 30310 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -228.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: H, L, M REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH L 445 O HOH M 550 1.91 REMARK 500 O HOH L 447 O HOH L 451 1.91 REMARK 500 O HOH H 340 O HOH H 341 1.98 REMARK 500 NE ARG M 253 O HOH M 516 2.04 REMARK 500 O HOH M 508 O HOH M 535 2.07 REMARK 500 NH1 ARG M 136 O HOH M 548 2.08 REMARK 500 O HOH M 552 O HOH M 553 2.11 REMARK 500 O LEU M 52 O HOH M 510 2.15 REMARK 500 OE2 GLU H 34 O HOH H 313 2.17 REMARK 500 OG SER M 172 O HOH M 549 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 GLU H 94 CA - CB - CG ANGL. DEV. = 19.3 DEGREES REMARK 500 LYS H 249 CA - CB - CG ANGL. DEV. = 13.9 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 VAL L 31 -82.99 -97.87 REMARK 500 LEU L 133 -64.77 -133.43 REMARK 500 LEU L 269 170.78 -48.76 REMARK 500 TYR M 3 115.59 7.38 REMARK 500 GLU M 22 -120.14 43.36 REMARK 500 ASN M 25 98.34 -68.13 REMARK 500 SER M 30 -177.49 -69.39 REMARK 500 LEU M 52 -88.23 -105.24 REMARK 500 GLU M 100 -7.06 -57.66 REMARK 500 PHE M 162 -60.51 -138.60 REMARK 500 ASN M 195 101.93 82.49 REMARK 500 ASP M 240 84.44 -154.01 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 ARG H 248 LYS H 249 -147.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 U10 M 401 REMARK 610 BCL M 403 REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 FE2 L 305 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS L 190 NE2 REMARK 620 2 HIS L 230 NE2 90.0 REMARK 620 3 HIS M 219 NE2 111.0 95.0 REMARK 620 4 GLU M 234 OE1 149.0 98.0 98.2 REMARK 620 5 GLU M 234 OE2 99.2 80.2 149.4 53.4 REMARK 620 6 HIS M 266 NE2 87.8 171.9 93.0 80.0 92.4 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue BPH L 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue BCL L 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue BCL L 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue UQ1 L 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FE2 L 305 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue U10 M 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue BCL M 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue BCL M 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue BPH M 404 DBREF 4TQQ H 11 250 UNP P0C0Y7 RCEH_RHOSH 11 250 DBREF 4TQQ L 1 281 UNP P0C0Y8 RCEL_RHOSH 2 282 DBREF 4TQQ M 1 302 UNP P0C0Y9 RCEM_RHOSH 2 303 SEQRES 1 H 240 ASP LEU ALA SER LEU ALA ILE TYR SER PHE TRP ILE PHE SEQRES 2 H 240 LEU ALA GLY LEU ILE TYR TYR LEU GLN THR GLU ASN MET SEQRES 3 H 240 ARG GLU GLY TYR PRO LEU GLU ASN GLU ASP GLY THR PRO SEQRES 4 H 240 ALA ALA ASN GLN GLY PRO PHE PRO LEU PRO LYS PRO LYS SEQRES 5 H 240 THR PHE ILE LEU PRO HIS GLY ARG GLY THR LEU THR VAL SEQRES 6 H 240 PRO GLY PRO GLU SER GLU ASP ARG PRO ILE ALA LEU ALA SEQRES 7 H 240 ARG THR ALA VAL SER GLU GLY PHE PRO HIS ALA PRO THR SEQRES 8 H 240 GLY ASP PRO MET LYS ASP GLY VAL GLY PRO ALA SER TRP SEQRES 9 H 240 VAL ALA ARG ARG ASP LEU PRO GLU LEU ASP GLY HIS GLY SEQRES 10 H 240 HIS ASN LYS ILE LYS PRO MET LYS ALA ALA ALA GLY PHE SEQRES 11 H 240 HIS VAL SER ALA GLY LYS ASN PRO ILE GLY LEU PRO VAL SEQRES 12 H 240 ARG GLY CYS ASP LEU GLU ILE ALA GLY LYS VAL VAL ASP SEQRES 13 H 240 ILE TRP VAL ASP ILE PRO GLU GLN MET ALA ARG PHE LEU SEQRES 14 H 240 GLU VAL GLU LEU LYS ASP GLY SER THR ARG LEU LEU PRO SEQRES 15 H 240 MET GLN MET VAL LYS VAL GLN SER ASN ARG VAL HIS VAL SEQRES 16 H 240 ASN ALA LEU SER SER ASP LEU PHE ALA GLY ILE PRO THR SEQRES 17 H 240 ILE LYS SER PRO THR GLU VAL THR LEU LEU GLU GLU ASP SEQRES 18 H 240 LYS ILE CYS GLY TYR VAL ALA GLY GLY LEU MET TYR ALA SEQRES 19 H 240 ALA PRO LYS ARG LYS SER SEQRES 1 L 281 ALA LEU LEU SER PHE GLU ARG LYS TYR ARG VAL PRO GLY SEQRES 2 L 281 GLY THR LEU VAL GLY GLY ASN LEU PHE ASP PHE TRP VAL SEQRES 3 L 281 GLY PRO PHE TYR VAL GLY PHE PHE GLY VAL ALA THR PHE SEQRES 4 L 281 PHE PHE ALA ALA LEU GLY ILE ILE LEU ILE ALA TRP SER SEQRES 5 L 281 ALA VAL LEU GLN GLY THR TRP ASN PRO GLN LEU ILE SER SEQRES 6 L 281 VAL TYR PRO PRO ALA LEU GLU TYR GLY LEU GLY GLY ALA SEQRES 7 L 281 PRO LEU ALA LYS GLY GLY LEU TRP GLN ILE ILE THR ILE SEQRES 8 L 281 CYS ALA THR GLY ALA PHE VAL SER TRP ALA LEU ARG GLU SEQRES 9 L 281 VAL GLU ILE CYS ARG LYS LEU GLY ILE GLY TYR HIS ILE SEQRES 10 L 281 PRO PHE ALA PHE ALA PHE ALA ILE LEU ALA TYR LEU THR SEQRES 11 L 281 LEU VAL LEU PHE ARG PRO VAL MET MET GLY ALA TRP GLY SEQRES 12 L 281 TYR ALA PHE PRO TYR GLY ILE TRP THR HIS LEU ASP TRP SEQRES 13 L 281 VAL SER ASN THR GLY TYR THR TYR GLY ASN PHE HIS TYR SEQRES 14 L 281 ASN PRO ALA HIS MET ILE ALA ILE SER PHE PHE PHE THR SEQRES 15 L 281 ASN ALA LEU ALA LEU ALA LEU HIS GLY ALA LEU VAL LEU SEQRES 16 L 281 SER ALA ALA ASN PRO GLU LYS GLY LYS GLU MET ARG THR SEQRES 17 L 281 PRO ASP HIS GLU ASP THR PHE PHE ARG ASP LEU VAL GLY SEQRES 18 L 281 TYR SER ILE GLY THR LEU GLY ILE HIS ARG LEU GLY LEU SEQRES 19 L 281 LEU LEU SER LEU SER ALA VAL PHE PHE SER ALA LEU CYS SEQRES 20 L 281 MET ILE ILE THR GLY THR ILE TRP PHE ASP GLN TRP VAL SEQRES 21 L 281 ASP TRP TRP GLN TRP TRP VAL LYS LEU PRO TRP TRP ALA SEQRES 22 L 281 ASN ILE PRO GLY GLY ILE ASN GLY SEQRES 1 M 302 ALA GLU TYR GLN ASN ILE PHE SER GLN VAL GLN VAL ARG SEQRES 2 M 302 GLY PRO ALA ASP LEU GLY MET THR GLU ASP VAL ASN LEU SEQRES 3 M 302 ALA ASN ARG SER GLY VAL GLY PRO PHE SER THR LEU LEU SEQRES 4 M 302 GLY TRP PHE GLY ASN ALA GLN LEU GLY PRO ILE TYR LEU SEQRES 5 M 302 GLY SER LEU GLY VAL LEU SER LEU PHE SER GLY LEU MET SEQRES 6 M 302 TRP PHE PHE THR ILE GLY ILE TRP PHE TRP TYR GLN ALA SEQRES 7 M 302 GLY TRP ASN PRO ALA VAL PHE LEU ARG ASP LEU PHE PHE SEQRES 8 M 302 PHE SER LEU GLU PRO PRO ALA PRO GLU TYR GLY LEU SER SEQRES 9 M 302 PHE ALA ALA PRO LEU LYS GLU GLY GLY LEU TRP LEU ILE SEQRES 10 M 302 ALA SER PHE PHE MET PHE VAL ALA VAL TRP SER TRP TRP SEQRES 11 M 302 GLY ARG THR TYR LEU ARG ALA GLN ALA LEU GLY MET GLY SEQRES 12 M 302 LYS HIS THR ALA TRP ALA PHE LEU SER ALA ILE TRP LEU SEQRES 13 M 302 TRP MET VAL LEU GLY PHE ILE ARG PRO ILE LEU MET GLY SEQRES 14 M 302 SER TRP SER GLU ALA VAL PRO TYR GLY ILE PHE SER HIS SEQRES 15 M 302 LEU ASP TRP THR ASN ASN PHE SER LEU VAL HIS GLY ASN SEQRES 16 M 302 LEU PHE TYR ASN PRO PHE HIS GLY LEU SER ILE ALA PHE SEQRES 17 M 302 LEU TYR GLY SER ALA LEU LEU PHE ALA MET HIS GLY ALA SEQRES 18 M 302 THR ILE LEU ALA VAL SER ARG PHE GLY GLY GLU ARG GLU SEQRES 19 M 302 LEU GLU GLN ILE ALA ASP ARG GLY THR ALA ALA GLU ARG SEQRES 20 M 302 ALA ALA LEU PHE TRP ARG TRP THR MET GLY PHE ASN ALA SEQRES 21 M 302 THR MET GLU GLY ILE HIS ARG TRP ALA ILE TRP MET ALA SEQRES 22 M 302 VAL LEU VAL THR LEU THR GLY GLY ILE GLY ILE LEU LEU SEQRES 23 M 302 SER GLY THR VAL VAL ASP ASN TRP TYR VAL TRP GLY GLN SEQRES 24 M 302 ASN HIS GLY HET BPH L 301 65 HET BCL L 302 66 HET BCL L 303 66 HET UQ1 L 304 18 HET FE2 L 305 1 HET U10 M 401 62 HET BCL M 402 66 HET BCL M 403 51 HET BPH M 404 65 HETNAM BPH BACTERIOPHEOPHYTIN A HETNAM BCL BACTERIOCHLOROPHYLL A HETNAM UQ1 UBIQUINONE-1 HETNAM FE2 FE (II) ION HETNAM U10 UBIQUINONE-10 HETSYN U10 COENZYME Q10 FORMUL 4 BPH 2(C55 H76 N4 O6) FORMUL 5 BCL 4(C55 H74 MG N4 O6) FORMUL 7 UQ1 C14 H18 O4 FORMUL 8 FE2 FE 2+ FORMUL 9 U10 C59 H90 O4 FORMUL 13 HOH *186(H2 O) HELIX 1 AA1 ASP H 11 ASN H 35 1 25 HELIX 2 AA2 ASP H 103 GLY H 108 1 6 HELIX 3 AA3 VAL H 109 SER H 113 5 5 HELIX 4 AA4 LYS H 135 ALA H 137 5 3 HELIX 5 AA5 GLN H 194 VAL H 196 5 3 HELIX 6 AA6 LEU H 212 ILE H 216 5 5 HELIX 7 AA7 THR H 226 ALA H 244 1 19 HELIX 8 AA8 ALA H 245 ARG H 248 5 4 HELIX 9 AA9 GLU L 6 ARG L 10 5 5 HELIX 10 AB1 VAL L 31 GLY L 57 1 27 HELIX 11 AB2 ALA L 70 GLY L 74 5 5 HELIX 12 AB3 PRO L 79 LYS L 82 5 4 HELIX 13 AB4 GLY L 83 GLY L 112 1 30 HELIX 14 AB5 TYR L 115 LEU L 133 1 19 HELIX 15 AB6 LEU L 133 GLY L 140 1 8 HELIX 16 AB7 ALA L 141 ALA L 145 5 5 HELIX 17 AB8 TRP L 151 TYR L 164 1 14 HELIX 18 AB9 GLY L 165 TYR L 169 5 5 HELIX 19 AC1 ASN L 170 ASN L 199 1 30 HELIX 20 AC2 THR L 208 GLY L 221 1 14 HELIX 21 AC3 GLY L 225 ILE L 250 1 26 HELIX 22 AC4 GLN L 258 TRP L 262 5 5 HELIX 23 AC5 TRP L 263 LYS L 268 1 6 HELIX 24 AC6 ASN M 25 ARG M 29 5 5 HELIX 25 AC7 SER M 36 TRP M 41 1 6 HELIX 26 AC8 LEU M 52 ALA M 78 1 27 HELIX 27 AC9 ASN M 81 ASP M 88 1 8 HELIX 28 AD1 ALA M 98 GLY M 102 5 5 HELIX 29 AD2 PRO M 108 GLU M 111 5 4 HELIX 30 AD3 GLY M 112 LEU M 140 1 29 HELIX 31 AD4 LYS M 144 PHE M 162 1 19 HELIX 32 AD5 PHE M 162 GLY M 169 1 8 HELIX 33 AD6 SER M 170 ALA M 174 5 5 HELIX 34 AD7 GLY M 178 HIS M 193 1 16 HELIX 35 AD8 ASN M 195 TYR M 198 5 4 HELIX 36 AD9 ASN M 199 VAL M 226 1 28 HELIX 37 AE1 SER M 227 GLY M 230 5 4 HELIX 38 AE2 ARG M 233 ASP M 240 1 8 HELIX 39 AE3 GLY M 242 GLY M 257 1 16 HELIX 40 AE4 GLU M 263 SER M 287 1 25 HELIX 41 AE5 ASN M 293 ASN M 300 1 8 SHEET 1 AA1 2 LYS H 62 ILE H 65 0 SHEET 2 AA1 2 THR H 72 VAL H 75 -1 O LEU H 73 N PHE H 64 SHEET 1 AA2 2 LEU H 87 ARG H 89 0 SHEET 2 AA2 2 HIS H 98 PRO H 100 -1 O ALA H 99 N ALA H 88 SHEET 1 AA3 4 ILE H 131 PRO H 133 0 SHEET 2 AA3 4 ILE H 160 ASP H 170 -1 O VAL H 169 N LYS H 132 SHEET 3 AA3 4 MET H 175 LEU H 183 -1 O MET H 175 N ASP H 170 SHEET 4 AA3 4 THR H 188 PRO H 192 -1 O ARG H 189 N VAL H 181 SHEET 1 AA4 5 ILE H 131 PRO H 133 0 SHEET 2 AA4 5 ILE H 160 ASP H 170 -1 O VAL H 169 N LYS H 132 SHEET 3 AA4 5 PRO H 152 ARG H 154 -1 N VAL H 153 O ALA H 161 SHEET 4 AA4 5 VAL H 203 HIS H 204 1 O VAL H 203 N ARG H 154 SHEET 5 AA4 5 LYS H 197 VAL H 198 -1 N LYS H 197 O HIS H 204 SHEET 1 AA5 2 HIS H 141 ALA H 144 0 SHEET 2 AA5 2 GLN M 11 ARG M 13 -1 O ARG M 13 N HIS H 141 SHEET 1 AA6 2 TRP L 25 VAL L 26 0 SHEET 2 AA6 2 PHE L 29 TYR L 30 -1 O PHE L 29 N VAL L 26 LINK NE2 HIS L 190 FE FE2 L 305 1555 1555 2.22 LINK NE2 HIS L 230 FE FE2 L 305 1555 1555 2.38 LINK FE FE2 L 305 NE2 HIS M 219 1555 1555 2.38 LINK FE FE2 L 305 OE1 GLU M 234 1555 1555 2.46 LINK FE FE2 L 305 OE2 GLU M 234 1555 1555 2.35 LINK FE FE2 L 305 NE2 HIS M 266 1555 1555 2.37 CISPEP 1 TYR H 40 PRO H 41 0 -0.52 CISPEP 2 VAL H 75 PRO H 76 0 -0.43 CISPEP 3 ALA H 138 GLY H 139 0 -11.36 CISPEP 4 GLY M 48 PRO M 49 0 -1.77 SITE 1 AC1 13 TRP L 100 GLU L 104 ILE L 117 PHE L 121 SITE 2 AC1 13 TYR L 148 VAL L 241 BCL L 302 BCL L 303 SITE 3 AC1 13 TYR M 210 ALA M 213 LEU M 214 TRP M 252 SITE 4 AC1 13 MET M 256 SITE 1 AC2 12 TYR L 128 HIS L 153 LEU L 154 BPH L 301 SITE 2 AC2 12 BCL L 303 PHE M 197 GLY M 203 ILE M 206 SITE 3 AC2 12 ALA M 207 TYR M 210 U10 M 401 HOH M 511 SITE 1 AC3 18 PHE L 97 ALA L 124 LEU L 131 VAL L 157 SITE 2 AC3 18 THR L 160 TYR L 162 ASN L 166 HIS L 168 SITE 3 AC3 18 HIS L 173 ALA L 176 ILE L 177 SER L 244 SITE 4 AC3 18 MET L 248 BPH L 301 BCL L 302 TYR M 210 SITE 5 AC3 18 BCL M 402 BCL M 403 SITE 1 AC4 10 HIS L 190 LEU L 193 ASP L 213 PHE L 216 SITE 2 AC4 10 TYR L 222 SER L 223 ILE L 224 GLY L 225 SITE 3 AC4 10 ILE L 229 HOH L 423 SITE 1 AC5 5 HIS L 190 HIS L 230 HIS M 219 GLU M 234 SITE 2 AC5 5 HIS M 266 SITE 1 AC6 14 SER H 93 PHE L 29 GLY L 35 PHE L 39 SITE 2 AC6 14 BCL L 302 HIS M 219 THR M 222 ALA M 248 SITE 3 AC6 14 ALA M 249 TRP M 252 ASN M 259 ALA M 260 SITE 4 AC6 14 ILE M 265 TRP M 268 SITE 1 AC7 21 VAL L 157 TYR L 162 PHE L 181 BCL L 303 SITE 2 AC7 21 ALA M 153 LEU M 156 LEU M 160 THR M 186 SITE 3 AC7 21 ASN M 187 PHE M 189 LEU M 196 PHE M 197 SITE 4 AC7 21 HIS M 202 SER M 205 ILE M 206 TYR M 210 SITE 5 AC7 21 VAL M 276 GLY M 280 ILE M 284 BCL M 403 SITE 6 AC7 21 BPH M 404 SITE 1 AC8 14 HIS L 168 MET L 174 ILE L 177 SER L 178 SITE 2 AC8 14 THR L 182 BCL L 303 HOH L 430 TRP M 157 SITE 3 AC8 14 ILE M 179 HIS M 182 LEU M 183 THR M 186 SITE 4 AC8 14 BCL M 402 BPH M 404 SITE 1 AC9 17 PHE L 181 ALA L 184 LEU L 185 LEU L 189 SITE 2 AC9 17 GLY M 63 TRP M 66 PHE M 67 GLY M 71 SITE 3 AC9 17 ALA M 125 VAL M 126 TRP M 129 THR M 146 SITE 4 AC9 17 PHE M 150 ALA M 273 THR M 277 BCL M 402 SITE 5 AC9 17 BCL M 403 CRYST1 102.484 102.484 239.939 90.00 90.00 90.00 P 42 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009758 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009758 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004168 0.00000