HEADER LIGASE 30-JUN-14 4TWA TITLE CRYSTAL STRUCTURE OF PROLYL-TRNA SYNTHETASE (PRS) FROM PLASMODIUM TITLE 2 FALCIPARUM COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROLINE--TRNA LIGASE; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: UNP RESIDUES 254-746; COMPND 5 SYNONYM: PROLYL-TRNA SYNTHETASE,PRORS; COMPND 6 EC: 6.1.1.15; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PLASMODIUM FALCIPARUM; SOURCE 3 ORGANISM_TAXID: 36329; SOURCE 4 STRAIN: ISOLATE 3D7; SOURCE 5 GENE: PRORS, PFL0670C; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: B834; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PETM41 KEYWDS PROTEIN TRANSLATION, HALOFUGINONE, MALARIA, INHIBITOR, PRS, KEYWDS 2 SYNTHETASE, LIGASE EXPDTA X-RAY DIFFRACTION AUTHOR V.JAIN,M.YOGAVEL,A.SHARMA REVDAT 3 27-SEP-23 4TWA 1 SOURCE KEYWDS REMARK REVDAT 2 03-DEC-14 4TWA 1 JRNL REVDAT 1 13-AUG-14 4TWA 0 JRNL AUTH V.JAIN,H.KIKUCHI,Y.OSHIMA,A.SHARMA,M.YOGAVEL JRNL TITL STRUCTURAL AND FUNCTIONAL ANALYSIS OF THE ANTI-MALARIAL DRUG JRNL TITL 2 TARGET PROLYL-TRNA SYNTHETASE. JRNL REF J. STRUCT. FUNCT. GENOMICS V. 15 181 2014 JRNL REFN ISSN 1570-0267 JRNL PMID 25047712 JRNL DOI 10.1007/S10969-014-9186-X REMARK 2 REMARK 2 RESOLUTION. 3.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.8.4_1496) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : TWIN_LSQ_F REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 38.79 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 30581 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.175 REMARK 3 R VALUE (WORKING SET) : 0.172 REMARK 3 FREE R VALUE : 0.249 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.180 REMARK 3 FREE R VALUE TEST SET COUNT : 1583 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 29.0866 - 6.6488 0.95 2707 143 0.1726 0.2072 REMARK 3 2 6.6488 - 5.2877 0.95 2648 128 0.1711 0.2324 REMARK 3 3 5.2877 - 4.6223 0.95 2667 132 0.1446 0.2083 REMARK 3 4 4.6223 - 4.2010 0.95 2643 128 0.1322 0.1989 REMARK 3 5 4.2010 - 3.9007 0.95 2640 144 0.1541 0.2015 REMARK 3 6 3.9007 - 3.6712 0.94 2599 162 0.1582 0.2705 REMARK 3 7 3.6712 - 3.4876 0.94 2614 153 0.1962 0.2975 REMARK 3 8 3.4876 - 3.3360 0.95 2613 139 0.1832 0.2992 REMARK 3 9 3.3360 - 3.2078 0.95 2621 144 0.2032 0.3059 REMARK 3 10 3.2078 - 3.0972 0.95 2628 132 0.2248 0.3424 REMARK 3 11 3.0972 - 3.0005 0.95 2629 138 0.2348 0.3463 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 25.500 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.009 8121 REMARK 3 ANGLE : 1.227 11028 REMARK 3 CHIRALITY : 0.047 1181 REMARK 3 PLANARITY : 0.006 1387 REMARK 3 DIHEDRAL : 16.063 2980 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ALL REMARK 3 ORIGIN FOR THE GROUP (A): 35.2759 22.1673 32.9794 REMARK 3 T TENSOR REMARK 3 T11: 0.1159 T22: 0.1182 REMARK 3 T33: 0.0872 T12: -0.0360 REMARK 3 T13: -0.0092 T23: 0.0034 REMARK 3 L TENSOR REMARK 3 L11: 0.1165 L22: 0.3603 REMARK 3 L33: 0.2870 L12: -0.0580 REMARK 3 L13: -0.0171 L23: 0.1325 REMARK 3 S TENSOR REMARK 3 S11: -0.0555 S12: 0.0001 S13: -0.0405 REMARK 3 S21: -0.1367 S22: 0.0050 S23: -0.0027 REMARK 3 S31: -0.0674 S32: 0.0012 S33: -0.0105 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4TWA COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 17-JUL-14. REMARK 100 THE DEPOSITION ID IS D_1000202391. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 23-APR-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.6 REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU FR-E+ SUPERBRIGHT REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.54 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS IV++ REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 30738 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.000 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 5.100 REMARK 200 R MERGE (I) : 0.15900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.05 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 5.10 REMARK 200 R MERGE FOR SHELL (I) : 0.68900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: 4K86 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 64.70 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.48 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.8 M LITHIUM SULPHATE MONOHYDRATE AND REMARK 280 0.1 M SODIUM ACETATE, PH 4.6, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 66.62000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 52.05300 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 66.62000 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 52.05300 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6900 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 40040 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -203.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 16340 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 77560 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -427.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 128.76852 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 111.33024 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 250 REMARK 465 ALA A 251 REMARK 465 ASN A 699 REMARK 465 GLN A 700 REMARK 465 THR A 701 REMARK 465 ASN A 702 REMARK 465 SER A 703 REMARK 465 GLU A 704 REMARK 465 THR A 705 REMARK 465 GLY B 250 REMARK 465 ALA B 251 REMARK 465 LYS B 324 REMARK 465 LEU B 325 REMARK 465 GLU B 326 REMARK 465 LYS B 327 REMARK 465 GLU B 328 REMARK 465 LYS B 329 REMARK 465 ASN B 330 REMARK 465 HIS B 331 REMARK 465 ASN B 699 REMARK 465 GLN B 700 REMARK 465 THR B 701 REMARK 465 ASN B 702 REMARK 465 SER B 703 REMARK 465 GLU B 704 REMARK 465 THR B 705 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 MET A 252 CG SD CE REMARK 470 LYS A 322 CE NZ REMARK 470 ASN A 323 CG OD1 ND2 REMARK 470 LYS A 344 CE NZ REMARK 470 ASP A 347 CG OD1 OD2 REMARK 470 SER A 348 OG REMARK 470 ASN A 349 CG OD1 ND2 REMARK 470 LEU A 350 CG CD1 CD2 REMARK 470 LYS A 394 CE NZ REMARK 470 ARG A 472 NH1 NH2 REMARK 470 LYS A 564 CG CD CE NZ REMARK 470 LYS A 604 CG CD CE NZ REMARK 470 LYS A 625 CE NZ REMARK 470 LYS A 647 CE NZ REMARK 470 ARG A 695 CZ NH1 NH2 REMARK 470 LEU A 698 CG CD1 CD2 REMARK 470 THR A 706 OG1 CG2 REMARK 470 ASN A 726 CG OD1 ND2 REMARK 470 LYS A 728 CD CE NZ REMARK 470 GLU B 260 CG CD OE1 OE2 REMARK 470 ASP B 280 CG OD1 OD2 REMARK 470 ILE B 281 CG1 CG2 CD1 REMARK 470 LYS B 322 CE NZ REMARK 470 ASN B 323 CG OD1 ND2 REMARK 470 GLU B 333 CG CD OE1 OE2 REMARK 470 THR B 343 OG1 CG2 REMARK 470 LYS B 344 CG CD CE NZ REMARK 470 ASP B 347 CG OD1 OD2 REMARK 470 SER B 348 OG REMARK 470 ASN B 349 CG OD1 ND2 REMARK 470 LEU B 350 CG CD1 CD2 REMARK 470 GLU B 352 CG CD OE1 OE2 REMARK 470 GLU B 353 CG CD OE1 OE2 REMARK 470 ILE B 354 CG1 CG2 CD1 REMARK 470 ILE B 356 CG1 CG2 CD1 REMARK 470 LYS B 394 CG CD CE NZ REMARK 470 GLN B 395 CG CD OE1 NE2 REMARK 470 LYS B 491 CG CD CE NZ REMARK 470 ASN B 534 OD1 ND2 REMARK 470 LYS B 548 CE NZ REMARK 470 ASN B 553 CG OD1 ND2 REMARK 470 LYS B 564 CG CD CE NZ REMARK 470 ASN B 568 OD1 ND2 REMARK 470 LYS B 604 CG CD CE NZ REMARK 470 LYS B 672 CG CD CE NZ REMARK 470 LEU B 698 CG CD1 CD2 REMARK 470 THR B 706 OG1 CG2 REMARK 470 LEU B 707 CG CD1 CD2 REMARK 470 SER B 708 OG REMARK 470 LYS B 712 CG CD CE NZ REMARK 470 ASN B 726 CG OD1 ND2 REMARK 470 LYS B 728 CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO B 351 C - N - CA ANGL. DEV. = 9.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 282 -7.81 75.11 REMARK 500 ASN A 349 140.65 -179.57 REMARK 500 LEU A 350 -64.11 -104.55 REMARK 500 PHE A 393 157.98 -48.13 REMARK 500 PHE A 399 -58.35 68.59 REMARK 500 GLU A 499 61.39 60.56 REMARK 500 THR A 513 -15.90 -49.42 REMARK 500 TYR A 547 -61.36 -128.53 REMARK 500 SER A 610 -154.00 -122.34 REMARK 500 CYS A 611 -177.13 -174.36 REMARK 500 ASN A 619 25.54 47.91 REMARK 500 GLU A 681 6.02 54.60 REMARK 500 LEU A 714 -64.23 -97.22 REMARK 500 ASN B 349 -134.57 49.65 REMARK 500 LEU B 350 146.05 -174.16 REMARK 500 GLU B 353 -128.68 58.59 REMARK 500 ILE B 354 -127.70 60.64 REMARK 500 ARG B 373 -69.69 -92.21 REMARK 500 PHE B 393 152.77 -47.19 REMARK 500 PHE B 399 -8.80 72.89 REMARK 500 ILE B 400 -50.35 -122.14 REMARK 500 SER B 610 -166.53 -129.29 REMARK 500 CYS B 611 148.45 -174.06 REMARK 500 ASN B 619 27.53 46.65 REMARK 500 ASN B 670 31.71 -96.11 REMARK 500 LEU B 707 14.45 -148.47 REMARK 500 SER B 708 158.75 174.93 REMARK 500 ALA B 710 -159.70 -99.72 REMARK 500 LEU B 714 -75.21 -90.20 REMARK 500 MET B 727 101.37 -164.58 REMARK 500 CYS B 729 171.35 -58.21 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 801 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 802 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 803 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 804 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 805 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 806 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 807 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 808 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 809 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL B 801 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL B 802 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL B 803 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 804 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 805 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 806 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 807 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 808 DBREF 4TWA A 254 746 UNP Q8I5R7 SYP_PLAF7 254 746 DBREF 4TWA B 254 746 UNP Q8I5R7 SYP_PLAF7 254 746 SEQADV 4TWA GLY A 250 UNP Q8I5R7 EXPRESSION TAG SEQADV 4TWA ALA A 251 UNP Q8I5R7 EXPRESSION TAG SEQADV 4TWA MET A 252 UNP Q8I5R7 EXPRESSION TAG SEQADV 4TWA ALA A 253 UNP Q8I5R7 EXPRESSION TAG SEQADV 4TWA GLY B 250 UNP Q8I5R7 EXPRESSION TAG SEQADV 4TWA ALA B 251 UNP Q8I5R7 EXPRESSION TAG SEQADV 4TWA MET B 252 UNP Q8I5R7 EXPRESSION TAG SEQADV 4TWA ALA B 253 UNP Q8I5R7 EXPRESSION TAG SEQRES 1 A 497 GLY ALA MET ALA ILE THR SER LYS LYS ILE GLU ASN PHE SEQRES 2 A 497 SER ASP TRP TYR THR GLN VAL ILE VAL LYS SER GLU LEU SEQRES 3 A 497 ILE GLU TYR TYR ASP ILE SER GLY CYS TYR ILE LEU ARG SEQRES 4 A 497 PRO ALA ALA TYR TYR ILE TRP GLU CYS VAL GLN ALA PHE SEQRES 5 A 497 PHE ASN LYS GLU ILE LYS LYS LEU ASN VAL GLU ASN SER SEQRES 6 A 497 TYR PHE PRO LEU PHE VAL THR LYS ASN LYS LEU GLU LYS SEQRES 7 A 497 GLU LYS ASN HIS ILE GLU GLY PHE SER PRO GLU VAL ALA SEQRES 8 A 497 TRP VAL THR LYS TYR GLY ASP SER ASN LEU PRO GLU GLU SEQRES 9 A 497 ILE ALA ILE ARG PRO THR SER GLU THR ILE MET TYR SER SEQRES 10 A 497 VAL PHE PRO LYS TRP ILE ARG SER TYR ARG ASP LEU PRO SEQRES 11 A 497 LEU LYS LEU ASN GLN TRP ASN THR VAL VAL ARG TRP GLU SEQRES 12 A 497 PHE LYS GLN PRO THR PRO PHE ILE ARG THR ARG GLU PHE SEQRES 13 A 497 LEU TRP GLN GLU GLY HIS THR ALA HIS LYS ASN GLU GLU SEQRES 14 A 497 GLU ALA VAL LYS LEU VAL PHE ASP ILE LEU ASP LEU TYR SEQRES 15 A 497 ARG ARG TRP TYR GLU GLU TYR LEU ALA VAL PRO ILE ILE SEQRES 16 A 497 LYS GLY ILE LYS SER GLU GLY GLU LYS PHE GLY GLY ALA SEQRES 17 A 497 ASN PHE THR SER THR ALA GLU ALA PHE ILE SER GLU ASN SEQRES 18 A 497 GLY ARG ALA ILE GLN ALA ALA THR SER HIS TYR LEU GLY SEQRES 19 A 497 THR ASN PHE ALA LYS MET PHE LYS ILE GLU PHE GLU ASP SEQRES 20 A 497 GLU ASN GLU VAL LYS GLN TYR VAL HIS GLN THR SER TRP SEQRES 21 A 497 GLY CYS THR THR ARG SER ILE GLY ILE MET ILE MET THR SEQRES 22 A 497 HIS GLY ASP ASP LYS GLY LEU VAL LEU PRO PRO ASN VAL SEQRES 23 A 497 SER LYS TYR LYS VAL VAL ILE VAL PRO ILE PHE TYR LYS SEQRES 24 A 497 THR THR ASP GLU ASN ALA ILE HIS SER TYR CYS LYS ASP SEQRES 25 A 497 ILE GLU LYS ILE LEU LYS ASN ALA GLN ILE ASN CYS VAL SEQRES 26 A 497 TYR ASP ASP ARG ALA SER TYR SER PRO GLY TYR LYS PHE SEQRES 27 A 497 ASN HIS TRP GLU LEU ARG GLY ILE PRO ILE ARG ILE GLU SEQRES 28 A 497 VAL GLY PRO LYS ASP LEU GLN ASN ASN SER CYS VAL ILE SEQRES 29 A 497 VAL ARG ARG ASP ASN ASN GLU LYS CYS ASN VAL LYS LYS SEQRES 30 A 497 GLU SER VAL LEU LEU GLU THR GLN GLN MET LEU VAL ASP SEQRES 31 A 497 ILE HIS LYS ASN LEU PHE LEU LYS ALA LYS LYS LYS LEU SEQRES 32 A 497 ASP ASP SER ILE VAL GLN VAL THR SER PHE SER GLU VAL SEQRES 33 A 497 MET ASN ALA LEU ASN LYS LYS LYS MET VAL LEU ALA PRO SEQRES 34 A 497 TRP CYS GLU ASP ILE ALA THR GLU GLU GLU ILE LYS LYS SEQRES 35 A 497 GLU THR GLN ARG LEU SER LEU ASN GLN THR ASN SER GLU SEQRES 36 A 497 THR THR LEU SER GLY ALA MET LYS PRO LEU CYS ILE PRO SEQRES 37 A 497 LEU ASP GLN PRO PRO MET PRO PRO ASN MET LYS CYS PHE SEQRES 38 A 497 TRP SER GLY LYS PRO ALA LYS ARG TRP CYS LEU PHE GLY SEQRES 39 A 497 ARG SER TYR SEQRES 1 B 497 GLY ALA MET ALA ILE THR SER LYS LYS ILE GLU ASN PHE SEQRES 2 B 497 SER ASP TRP TYR THR GLN VAL ILE VAL LYS SER GLU LEU SEQRES 3 B 497 ILE GLU TYR TYR ASP ILE SER GLY CYS TYR ILE LEU ARG SEQRES 4 B 497 PRO ALA ALA TYR TYR ILE TRP GLU CYS VAL GLN ALA PHE SEQRES 5 B 497 PHE ASN LYS GLU ILE LYS LYS LEU ASN VAL GLU ASN SER SEQRES 6 B 497 TYR PHE PRO LEU PHE VAL THR LYS ASN LYS LEU GLU LYS SEQRES 7 B 497 GLU LYS ASN HIS ILE GLU GLY PHE SER PRO GLU VAL ALA SEQRES 8 B 497 TRP VAL THR LYS TYR GLY ASP SER ASN LEU PRO GLU GLU SEQRES 9 B 497 ILE ALA ILE ARG PRO THR SER GLU THR ILE MET TYR SER SEQRES 10 B 497 VAL PHE PRO LYS TRP ILE ARG SER TYR ARG ASP LEU PRO SEQRES 11 B 497 LEU LYS LEU ASN GLN TRP ASN THR VAL VAL ARG TRP GLU SEQRES 12 B 497 PHE LYS GLN PRO THR PRO PHE ILE ARG THR ARG GLU PHE SEQRES 13 B 497 LEU TRP GLN GLU GLY HIS THR ALA HIS LYS ASN GLU GLU SEQRES 14 B 497 GLU ALA VAL LYS LEU VAL PHE ASP ILE LEU ASP LEU TYR SEQRES 15 B 497 ARG ARG TRP TYR GLU GLU TYR LEU ALA VAL PRO ILE ILE SEQRES 16 B 497 LYS GLY ILE LYS SER GLU GLY GLU LYS PHE GLY GLY ALA SEQRES 17 B 497 ASN PHE THR SER THR ALA GLU ALA PHE ILE SER GLU ASN SEQRES 18 B 497 GLY ARG ALA ILE GLN ALA ALA THR SER HIS TYR LEU GLY SEQRES 19 B 497 THR ASN PHE ALA LYS MET PHE LYS ILE GLU PHE GLU ASP SEQRES 20 B 497 GLU ASN GLU VAL LYS GLN TYR VAL HIS GLN THR SER TRP SEQRES 21 B 497 GLY CYS THR THR ARG SER ILE GLY ILE MET ILE MET THR SEQRES 22 B 497 HIS GLY ASP ASP LYS GLY LEU VAL LEU PRO PRO ASN VAL SEQRES 23 B 497 SER LYS TYR LYS VAL VAL ILE VAL PRO ILE PHE TYR LYS SEQRES 24 B 497 THR THR ASP GLU ASN ALA ILE HIS SER TYR CYS LYS ASP SEQRES 25 B 497 ILE GLU LYS ILE LEU LYS ASN ALA GLN ILE ASN CYS VAL SEQRES 26 B 497 TYR ASP ASP ARG ALA SER TYR SER PRO GLY TYR LYS PHE SEQRES 27 B 497 ASN HIS TRP GLU LEU ARG GLY ILE PRO ILE ARG ILE GLU SEQRES 28 B 497 VAL GLY PRO LYS ASP LEU GLN ASN ASN SER CYS VAL ILE SEQRES 29 B 497 VAL ARG ARG ASP ASN ASN GLU LYS CYS ASN VAL LYS LYS SEQRES 30 B 497 GLU SER VAL LEU LEU GLU THR GLN GLN MET LEU VAL ASP SEQRES 31 B 497 ILE HIS LYS ASN LEU PHE LEU LYS ALA LYS LYS LYS LEU SEQRES 32 B 497 ASP ASP SER ILE VAL GLN VAL THR SER PHE SER GLU VAL SEQRES 33 B 497 MET ASN ALA LEU ASN LYS LYS LYS MET VAL LEU ALA PRO SEQRES 34 B 497 TRP CYS GLU ASP ILE ALA THR GLU GLU GLU ILE LYS LYS SEQRES 35 B 497 GLU THR GLN ARG LEU SER LEU ASN GLN THR ASN SER GLU SEQRES 36 B 497 THR THR LEU SER GLY ALA MET LYS PRO LEU CYS ILE PRO SEQRES 37 B 497 LEU ASP GLN PRO PRO MET PRO PRO ASN MET LYS CYS PHE SEQRES 38 B 497 TRP SER GLY LYS PRO ALA LYS ARG TRP CYS LEU PHE GLY SEQRES 39 B 497 ARG SER TYR HET CL A 801 1 HET CL A 802 1 HET CL A 803 1 HET SO4 A 804 5 HET SO4 A 805 5 HET SO4 A 806 5 HET SO4 A 807 5 HET SO4 A 808 5 HET SO4 A 809 5 HET CL B 801 1 HET CL B 802 1 HET CL B 803 1 HET SO4 B 804 5 HET SO4 B 805 5 HET SO4 B 806 5 HET SO4 B 807 5 HET SO4 B 808 5 HETNAM CL CHLORIDE ION HETNAM SO4 SULFATE ION FORMUL 3 CL 6(CL 1-) FORMUL 6 SO4 11(O4 S 2-) FORMUL 20 HOH *57(H2 O) HELIX 1 AA1 ASN A 261 SER A 273 1 13 HELIX 2 AA2 ARG A 288 LEU A 309 1 22 HELIX 3 AA3 THR A 321 LYS A 324 5 4 HELIX 4 AA4 LEU A 325 ILE A 332 1 8 HELIX 5 AA5 SER A 336 THR A 343 5 8 HELIX 6 AA6 PRO A 351 ILE A 356 1 6 HELIX 7 AA7 SER A 360 ILE A 372 1 13 HELIX 8 AA8 SER A 374 LEU A 378 5 5 HELIX 9 AA9 ASN A 416 ALA A 440 1 25 HELIX 10 AB1 THR A 484 LYS A 491 1 8 HELIX 11 AB2 THR A 513 GLY A 524 1 12 HELIX 12 AB3 PRO A 532 SER A 536 5 5 HELIX 13 AB4 ASP A 551 ASN A 568 1 18 HELIX 14 AB5 SER A 582 ARG A 593 1 12 HELIX 15 AB6 GLY A 602 GLN A 607 1 6 HELIX 16 AB7 SER A 628 SER A 655 1 28 HELIX 17 AB8 PHE A 662 LYS A 671 1 10 HELIX 18 AB9 ILE A 683 LEU A 696 1 14 HELIX 19 AC1 ASN B 261 SER B 273 1 13 HELIX 20 AC2 ARG B 288 LEU B 309 1 22 HELIX 21 AC3 GLU B 353 ARG B 357 5 5 HELIX 22 AC4 THR B 359 PHE B 368 1 10 HELIX 23 AC5 PRO B 369 ILE B 372 5 4 HELIX 24 AC6 SER B 374 LEU B 378 5 5 HELIX 25 AC7 ASN B 416 ALA B 440 1 25 HELIX 26 AC8 THR B 484 LYS B 491 1 8 HELIX 27 AC9 THR B 513 GLY B 524 1 12 HELIX 28 AD1 PRO B 532 SER B 536 5 5 HELIX 29 AD2 LYS B 548 ASN B 568 1 21 HELIX 30 AD3 SER B 582 LEU B 592 1 11 HELIX 31 AD4 GLY B 602 ASN B 608 1 7 HELIX 32 AD5 SER B 628 SER B 655 1 28 HELIX 33 AD6 SER B 661 ASN B 670 1 10 HELIX 34 AD7 ALA B 684 SER B 697 1 14 SHEET 1 AA1 2 ILE A 276 TYR A 278 0 SHEET 2 AA1 2 TYR A 285 LEU A 287 -1 O ILE A 286 N GLU A 277 SHEET 1 AA211 GLU A 312 ASN A 313 0 SHEET 2 AA211 LEU A 380 VAL A 388 1 O LYS A 381 N GLU A 312 SHEET 3 AA211 PHE A 405 HIS A 414 -1 O PHE A 405 N VAL A 388 SHEET 4 AA211 HIS A 505 THR A 512 -1 O TRP A 509 N GLY A 410 SHEET 5 AA211 ARG A 472 GLY A 483 -1 N HIS A 480 O SER A 508 SHEET 6 AA211 PHE A 459 ILE A 467 -1 N SER A 461 O SER A 479 SHEET 7 AA211 ILE A 444 ILE A 447 -1 N ILE A 444 O GLU A 464 SHEET 8 AA211 LYS A 712 PRO A 717 -1 O ILE A 716 N ILE A 447 SHEET 9 AA211 ARG A 738 GLY A 743 -1 O LEU A 741 N LEU A 714 SHEET 10 AA211 MET A 674 TRP A 679 -1 N TRP A 679 O ARG A 738 SHEET 11 AA211 ILE A 656 GLN A 658 1 N VAL A 657 O LEU A 676 SHEET 1 AA3 2 GLU A 493 GLU A 495 0 SHEET 2 AA3 2 LYS A 501 TYR A 503 -1 O GLN A 502 N PHE A 494 SHEET 1 AA4 5 CYS A 573 TYR A 575 0 SHEET 2 AA4 5 VAL A 540 PRO A 544 1 N ILE A 542 O VAL A 574 SHEET 3 AA4 5 ILE A 597 VAL A 601 1 O ILE A 599 N VAL A 543 SHEET 4 AA4 5 VAL A 612 ARG A 615 -1 O VAL A 612 N GLU A 600 SHEET 5 AA4 5 LYS A 621 ASN A 623 -1 O CYS A 622 N ILE A 613 SHEET 1 AA5 2 ILE B 276 TYR B 278 0 SHEET 2 AA5 2 TYR B 285 LEU B 287 -1 O ILE B 286 N GLU B 277 SHEET 1 AA6 7 GLU B 312 ASN B 313 0 SHEET 2 AA6 7 LEU B 380 VAL B 389 1 O LYS B 381 N GLU B 312 SHEET 3 AA6 7 GLU B 404 ALA B 413 -1 O TRP B 407 N ASN B 386 SHEET 4 AA6 7 GLN B 506 THR B 512 -1 O TRP B 509 N GLY B 410 SHEET 5 AA6 7 ARG B 472 GLY B 483 -1 N LEU B 482 O GLN B 506 SHEET 6 AA6 7 ARG B 738 SER B 745 1 O ARG B 744 N ALA B 473 SHEET 7 AA6 7 LYS B 712 PRO B 713 -1 N LYS B 712 O GLY B 743 SHEET 1 AA7 7 ILE B 656 GLN B 658 0 SHEET 2 AA7 7 MET B 674 TRP B 679 1 O MET B 674 N VAL B 657 SHEET 3 AA7 7 ARG B 738 SER B 745 -1 O PHE B 742 N VAL B 675 SHEET 4 AA7 7 ARG B 472 GLY B 483 1 N ALA B 473 O ARG B 744 SHEET 5 AA7 7 PHE B 459 ILE B 467 -1 N PHE B 459 O TYR B 481 SHEET 6 AA7 7 ILE B 444 LYS B 448 -1 N LYS B 448 O THR B 460 SHEET 7 AA7 7 CYS B 715 PRO B 717 -1 O ILE B 716 N ILE B 447 SHEET 1 AA8 2 GLU B 493 GLU B 495 0 SHEET 2 AA8 2 LYS B 501 TYR B 503 -1 O GLN B 502 N PHE B 494 SHEET 1 AA9 2 LEU B 529 VAL B 530 0 SHEET 2 AA9 2 ARG B 593 GLY B 594 1 O GLY B 594 N LEU B 529 SHEET 1 AB1 5 CYS B 573 TYR B 575 0 SHEET 2 AB1 5 VAL B 540 PRO B 544 1 N VAL B 540 O VAL B 574 SHEET 3 AB1 5 ILE B 597 VAL B 601 1 O ILE B 599 N VAL B 543 SHEET 4 AB1 5 VAL B 612 ARG B 615 -1 O VAL B 614 N ARG B 598 SHEET 5 AB1 5 LYS B 621 ASN B 623 -1 O CYS B 622 N ILE B 613 CISPEP 1 ASN A 349 LEU A 350 0 7.39 CISPEP 2 LEU A 378 PRO A 379 0 -3.38 CISPEP 3 LYS B 322 ASN B 323 0 1.15 CISPEP 4 LEU B 378 PRO B 379 0 0.19 CISPEP 5 SER B 697 LEU B 698 0 -2.00 CISPEP 6 SER B 708 GLY B 709 0 -2.05 CISPEP 7 ASN B 726 MET B 727 0 -21.47 SITE 1 AC1 2 ARG A 403 CL A 802 SITE 1 AC2 3 LYS A 394 ARG A 401 CL A 801 SITE 1 AC3 2 ASN A 310 LYS A 381 SITE 1 AC4 5 LYS A 324 ARG A 390 PHE A 393 ARG A 403 SITE 2 AC4 5 ARG A 695 SITE 1 AC5 3 ASP A 429 ARG A 432 LYS A 445 SITE 1 AC6 3 ASN A 458 LYS A 548 PRO A 603 SITE 1 AC7 1 TYR A 293 SITE 1 AC8 3 ARG A 432 GLU A 436 GLU A 437 SITE 1 AC9 2 ASN A 618 LYS A 647 SITE 1 AD1 1 CL B 802 SITE 1 AD2 4 LYS B 394 GLN B 395 ARG B 401 CL B 801 SITE 1 AD3 2 ASN B 310 LYS B 381 SITE 1 AD4 6 ARG A 578 ALA A 579 SER A 580 PRO A 722 SITE 2 AD4 6 TYR B 375 ARG B 376 SITE 1 AD5 3 ASN B 618 ASN B 643 LYS B 647 SITE 1 AD6 4 LYS A 307 TYR B 293 LYS B 537 LYS B 539 SITE 1 AD7 2 ASN B 623 ARG B 695 SITE 1 AD8 2 LYS B 344 TYR B 345 CRYST1 133.240 104.106 111.420 90.00 92.30 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007505 0.000000 0.000302 0.00000 SCALE2 0.000000 0.009606 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008982 0.00000