HEADER MEMBRANE PROTEIN/INHIBITOR 15-JUL-14 4U15 TITLE M3-MT4L RECEPTOR BOUND TO TIOTROPIUM COMPND MOL_ID: 1; COMPND 2 MOLECULE: MUSCARINIC ACETYLCHOLINE RECEPTOR M3,LYSOZYME,MUSCARINIC COMPND 3 ACETYLCHOLINE RECEPTOR M3; COMPND 4 CHAIN: A, B; COMPND 5 FRAGMENT: UNP P08483 RESIDUES 57-259, 482-563, UNP D9IEF7 RESIDUES COMPND 6 61-161; COMPND 7 EC: 3.2.1.17; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: RATTUS NORVEGICUS, ENTEROBACTERIA PHAGE T4; SOURCE 3 ORGANISM_COMMON: RAT; SOURCE 4 ORGANISM_TAXID: 10116, 10665; SOURCE 5 GENE: CHRM3, CHRM-3, E, T4TP126; SOURCE 6 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 7108 KEYWDS GPCR T4L STABILLIZED CRYSTALLOGRAPHY, MEMBRANE PROTEIN, MEMBRANE KEYWDS 2 PROTEIN-INHIBITOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR T.S.THORSEN,R.MATT,W.I.WEIS,B.KOBILKA REVDAT 5 20-NOV-24 4U15 1 REMARK REVDAT 4 27-DEC-23 4U15 1 REMARK REVDAT 3 22-NOV-17 4U15 1 SOURCE JRNL REMARK REVDAT 2 24-DEC-14 4U15 1 JRNL REVDAT 1 26-NOV-14 4U15 0 JRNL AUTH T.S.THORSEN,R.MATT,W.I.WEIS,B.K.KOBILKA JRNL TITL MODIFIED T4 LYSOZYME FUSION PROTEINS FACILITATE G JRNL TITL 2 PROTEIN-COUPLED RECEPTOR CRYSTALLOGENESIS. JRNL REF STRUCTURE V. 22 1657 2014 JRNL REFN ISSN 0969-2126 JRNL PMID 25450769 JRNL DOI 10.1016/J.STR.2014.08.022 REMARK 2 REMARK 2 RESOLUTION. 2.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.8.4_1496) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 28.48 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.390 REMARK 3 COMPLETENESS FOR RANGE (%) : 96.7 REMARK 3 NUMBER OF REFLECTIONS : 34101 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.232 REMARK 3 R VALUE (WORKING SET) : 0.230 REMARK 3 FREE R VALUE : 0.261 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.990 REMARK 3 FREE R VALUE TEST SET COUNT : 1703 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 28.4782 - 6.3883 0.94 2664 140 0.1830 0.1869 REMARK 3 2 6.3883 - 5.0800 0.97 2718 143 0.2438 0.2420 REMARK 3 3 5.0800 - 4.4406 0.97 2709 142 0.2004 0.2839 REMARK 3 4 4.4406 - 4.0358 0.97 2703 139 0.2065 0.2382 REMARK 3 5 4.0358 - 3.7472 0.98 2713 142 0.2254 0.2599 REMARK 3 6 3.7472 - 3.5267 0.98 2733 141 0.2284 0.2649 REMARK 3 7 3.5267 - 3.3504 0.98 2758 145 0.2476 0.3249 REMARK 3 8 3.3504 - 3.2047 0.98 2724 145 0.2711 0.2949 REMARK 3 9 3.2047 - 3.0815 0.98 2689 142 0.2887 0.3405 REMARK 3 10 3.0815 - 2.9753 0.98 2758 142 0.3146 0.3382 REMARK 3 11 2.9753 - 2.8824 0.95 2653 142 0.3628 0.4293 REMARK 3 12 2.8824 - 2.8000 0.94 2576 140 0.3880 0.4033 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.440 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 33.090 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 73.91 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.003 6495 REMARK 3 ANGLE : 0.656 8837 REMARK 3 CHIRALITY : 0.021 1029 REMARK 3 PLANARITY : 0.003 1071 REMARK 3 DIHEDRAL : 13.449 2293 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4U15 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 15-AUG-14. REMARK 100 THE DEPOSITION ID IS D_1000202634. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-DEC-12 REMARK 200 TEMPERATURE (KELVIN) : 80 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 23-ID-D REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.033 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 37934 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.700 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.4 REMARK 200 DATA REDUNDANCY : 5.100 REMARK 200 R MERGE (I) : 0.12900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 8.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.76 REMARK 200 COMPLETENESS FOR SHELL (%) : 93.2 REMARK 200 DATA REDUNDANCY IN SHELL : 4.00 REMARK 200 R MERGE FOR SHELL (I) : 0.94100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 67.72 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.81 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: THE BEST CRYSTALLIZATION CONDITION WAS REMARK 280 100 MM TRIS PH 7.5, 44% PEG 300 AND 400 MM AMMONIUM TARTRATE., REMARK 280 LIPIDIC CUBIC PHASE, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 76.15550 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 92.28150 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 76.15550 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 92.28150 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: BIOLOGICAL UNIT IS THE SAME AS ASYM. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5140 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 36890 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -21.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 56 REMARK 465 ASP A 57 REMARK 465 PRO A 58 REMARK 465 LEU A 59 REMARK 465 GLY A 60 REMARK 465 GLY A 61 REMARK 465 HIS A 62 REMARK 465 LEU A 558 REMARK 465 LEU A 559 REMARK 465 CYS A 560 REMARK 465 GLN A 561 REMARK 465 CYS A 562 REMARK 465 ASP A 563 REMARK 465 LYS A 564 REMARK 465 ARG A 565 REMARK 465 LYS A 566 REMARK 465 ARG A 567 REMARK 465 ARG A 568 REMARK 465 LYS A 569 REMARK 465 HIS A 570 REMARK 465 HIS A 571 REMARK 465 HIS A 572 REMARK 465 HIS A 573 REMARK 465 HIS A 574 REMARK 465 HIS A 575 REMARK 465 HIS A 576 REMARK 465 HIS A 577 REMARK 465 GLY B 56 REMARK 465 ASP B 57 REMARK 465 PRO B 58 REMARK 465 LEU B 59 REMARK 465 GLY B 60 REMARK 465 GLY B 61 REMARK 465 HIS B 62 REMARK 465 LEU B 559 REMARK 465 CYS B 560 REMARK 465 GLN B 561 REMARK 465 CYS B 562 REMARK 465 ASP B 563 REMARK 465 LYS B 564 REMARK 465 ARG B 565 REMARK 465 LYS B 566 REMARK 465 ARG B 567 REMARK 465 ARG B 568 REMARK 465 LYS B 569 REMARK 465 HIS B 570 REMARK 465 HIS B 571 REMARK 465 HIS B 572 REMARK 465 HIS B 573 REMARK 465 HIS B 574 REMARK 465 HIS B 575 REMARK 465 HIS B 576 REMARK 465 HIS B 577 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ILE A 64 CG1 CG2 CD1 REMARK 470 VAL A 68 CG1 CG2 REMARK 470 ILE A 70 CG1 CG2 CD1 REMARK 470 LYS A 93 CG CD CE NZ REMARK 470 LYS A 96 CG CD CE NZ REMARK 470 GLN A 97 CG CD OE1 NE2 REMARK 470 ARG A 132 CG CD NE CZ NH1 NH2 REMARK 470 LEU A 135 CG CD1 CD2 REMARK 470 ARG A 171 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 178 CG CD CE NZ REMARK 470 LYS A 182 CG CD CE NZ REMARK 470 LYS A 212 CG CD CE NZ REMARK 470 VAL A 215 CG1 CG2 REMARK 470 GLU A 258 CG CD OE1 OE2 REMARK 470 LYS A 259 CG CD CE NZ REMARK 470 ASP A1018 CG OD1 OD2 REMARK 470 LYS A1022 CG CD CE NZ REMARK 470 LYS A1104 CG CD CE NZ REMARK 470 ILE A 483 CG1 CG2 CD1 REMARK 470 LYS A 487 CG CD CE NZ REMARK 470 SER A 518 OG REMARK 470 LEU A 545 CG CD1 CD2 REMARK 470 LYS A 548 CG CD CE NZ REMARK 470 LYS A 555 CG CD CE NZ REMARK 470 THR A 556 OG1 CG2 REMARK 470 LEU A 557 CG CD1 CD2 REMARK 470 ILE B 64 CG1 CG2 CD1 REMARK 470 TRP B 65 CG CD1 CD2 NE1 CE2 CE3 CZ2 REMARK 470 TRP B 65 CZ3 CH2 REMARK 470 LYS B 93 CG CD CE NZ REMARK 470 LYS B 96 CG CD CE NZ REMARK 470 ARG B 132 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 182 CG CD CE NZ REMARK 470 LYS B 212 CG CD CE NZ REMARK 470 LYS B 255 CG CD CE NZ REMARK 470 THR B 257 OG1 CG2 REMARK 470 GLU B 258 CG CD OE1 OE2 REMARK 470 GLN B1026 CG CD OE1 NE2 REMARK 470 LYS B1092 CG CD CE NZ REMARK 470 LYS B 484 CG CD CE NZ REMARK 470 GLU B 485 CG CD OE1 OE2 REMARK 470 LYS B 487 CG CD CE NZ REMARK 470 SER B 518 OG REMARK 470 LYS B 548 CG CD CE NZ REMARK 470 LYS B 555 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 99 58.42 -93.34 REMARK 500 THR A 100 -156.63 -83.64 REMARK 500 ILE A 119 -59.54 -123.35 REMARK 500 TYR A 175 -49.60 -147.14 REMARK 500 ARG A 179 88.70 -69.66 REMARK 500 PHE A 239 -59.74 -134.55 REMARK 500 GLU A 256 52.10 -98.35 REMARK 500 MET A1001 96.04 -167.72 REMARK 500 ASP A 517 -100.27 -87.08 REMARK 500 CYS A 519 -16.21 -141.97 REMARK 500 CYS A 546 -61.76 -131.95 REMARK 500 LYS B 99 82.40 -69.75 REMARK 500 ILE B 119 -69.06 -93.03 REMARK 500 ASN B 131 17.04 57.01 REMARK 500 LEU B 173 -77.23 -70.29 REMARK 500 PHE B 239 -58.71 -128.51 REMARK 500 SER B1015 147.77 -173.35 REMARK 500 THR B1099 71.77 58.92 REMARK 500 ASP B1116 4.05 -64.16 REMARK 500 CYS B 546 -55.58 -122.32 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 0HK A 2001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue P6G A 2002 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue P6G A 2003 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue P6G A 2004 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue TAR A 2005 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue TAR A 2006 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 0HK B 1201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue OLC B 1202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue OLC B 1203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue P6G B 1204 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue TAR B 1205 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue TAR B 1206 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4U14 RELATED DB: PDB REMARK 900 RELATED ID: 4U16 RELATED DB: PDB REMARK 999 REMARK 999 SEQUENCE REMARK 999 THE FUSION PROTEIN IS A CHIMERIC OF M3 AND RB69 LYSOZYME. THE REMARK 999 FUSION PROTEIN IS MADE OF M 3 ( RESIDUES 57-259) - LYSOZYME REMARK 999 (RESIDUES 1000-1117)- M3 (RESIDUES 482-563). DBREF 4U15 A 57 259 UNP P08483 ACM3_RAT 57 259 DBREF 4U15 A 1018 1118 UNP D9IEF7 D9IEF7_BPT4 61 161 DBREF 4U15 A 482 563 UNP P08483 ACM3_RAT 482 563 DBREF 4U15 B 57 259 UNP P08483 ACM3_RAT 57 259 DBREF 4U15 B 1018 1118 UNP D9IEF7 D9IEF7_BPT4 61 161 DBREF 4U15 B 482 563 UNP P08483 ACM3_RAT 482 563 SEQADV 4U15 GLY A 56 UNP P08483 EXPRESSION TAG SEQADV 4U15 MET A 1001 UNP P08483 LINKER SEQADV 4U15 ASN A 1002 UNP P08483 LINKER SEQADV 4U15 ILE A 1003 UNP P08483 LINKER SEQADV 4U15 PHE A 1004 UNP P08483 LINKER SEQADV 4U15 GLU A 1005 UNP P08483 LINKER SEQADV 4U15 MET A 1006 UNP P08483 LINKER SEQADV 4U15 LEU A 1007 UNP P08483 LINKER SEQADV 4U15 ARG A 1008 UNP P08483 LINKER SEQADV 4U15 ILE A 1009 UNP P08483 LINKER SEQADV 4U15 ASP A 1010 UNP P08483 LINKER SEQADV 4U15 GLU A 1011 UNP P08483 LINKER SEQADV 4U15 GLY A 1012 UNP P08483 LINKER SEQADV 4U15 GLY A 1013 UNP P08483 LINKER SEQADV 4U15 GLY A 1014 UNP P08483 LINKER SEQADV 4U15 SER A 1015 UNP P08483 LINKER SEQADV 4U15 GLY A 1016 UNP P08483 LINKER SEQADV 4U15 GLY A 1017 UNP P08483 LINKER SEQADV 4U15 ALA A 1054 UNP D9IEF7 CYS 97 CONFLICT SEQADV 4U15 LYS A 564 UNP P08483 EXPRESSION TAG SEQADV 4U15 ARG A 565 UNP P08483 EXPRESSION TAG SEQADV 4U15 LYS A 566 UNP P08483 EXPRESSION TAG SEQADV 4U15 ARG A 567 UNP P08483 EXPRESSION TAG SEQADV 4U15 ARG A 568 UNP P08483 EXPRESSION TAG SEQADV 4U15 LYS A 569 UNP P08483 EXPRESSION TAG SEQADV 4U15 HIS A 570 UNP P08483 EXPRESSION TAG SEQADV 4U15 HIS A 571 UNP P08483 EXPRESSION TAG SEQADV 4U15 HIS A 572 UNP P08483 EXPRESSION TAG SEQADV 4U15 HIS A 573 UNP P08483 EXPRESSION TAG SEQADV 4U15 HIS A 574 UNP P08483 EXPRESSION TAG SEQADV 4U15 HIS A 575 UNP P08483 EXPRESSION TAG SEQADV 4U15 HIS A 576 UNP P08483 EXPRESSION TAG SEQADV 4U15 HIS A 577 UNP P08483 EXPRESSION TAG SEQADV 4U15 GLY B 56 UNP P08483 EXPRESSION TAG SEQADV 4U15 MET B 1001 UNP P08483 LINKER SEQADV 4U15 ASN B 1002 UNP P08483 LINKER SEQADV 4U15 ILE B 1003 UNP P08483 LINKER SEQADV 4U15 PHE B 1004 UNP P08483 LINKER SEQADV 4U15 GLU B 1005 UNP P08483 LINKER SEQADV 4U15 MET B 1006 UNP P08483 LINKER SEQADV 4U15 LEU B 1007 UNP P08483 LINKER SEQADV 4U15 ARG B 1008 UNP P08483 LINKER SEQADV 4U15 ILE B 1009 UNP P08483 LINKER SEQADV 4U15 ASP B 1010 UNP P08483 LINKER SEQADV 4U15 GLU B 1011 UNP P08483 LINKER SEQADV 4U15 GLY B 1012 UNP P08483 LINKER SEQADV 4U15 GLY B 1013 UNP P08483 LINKER SEQADV 4U15 GLY B 1014 UNP P08483 LINKER SEQADV 4U15 SER B 1015 UNP P08483 LINKER SEQADV 4U15 GLY B 1016 UNP P08483 LINKER SEQADV 4U15 GLY B 1017 UNP P08483 LINKER SEQADV 4U15 ALA B 1054 UNP D9IEF7 CYS 97 CONFLICT SEQADV 4U15 LYS B 564 UNP P08483 EXPRESSION TAG SEQADV 4U15 ARG B 565 UNP P08483 EXPRESSION TAG SEQADV 4U15 LYS B 566 UNP P08483 EXPRESSION TAG SEQADV 4U15 ARG B 567 UNP P08483 EXPRESSION TAG SEQADV 4U15 ARG B 568 UNP P08483 EXPRESSION TAG SEQADV 4U15 LYS B 569 UNP P08483 EXPRESSION TAG SEQADV 4U15 HIS B 570 UNP P08483 EXPRESSION TAG SEQADV 4U15 HIS B 571 UNP P08483 EXPRESSION TAG SEQADV 4U15 HIS B 572 UNP P08483 EXPRESSION TAG SEQADV 4U15 HIS B 573 UNP P08483 EXPRESSION TAG SEQADV 4U15 HIS B 574 UNP P08483 EXPRESSION TAG SEQADV 4U15 HIS B 575 UNP P08483 EXPRESSION TAG SEQADV 4U15 HIS B 576 UNP P08483 EXPRESSION TAG SEQADV 4U15 HIS B 577 UNP P08483 EXPRESSION TAG SEQRES 1 A 418 GLY ASP PRO LEU GLY GLY HIS THR ILE TRP GLN VAL VAL SEQRES 2 A 418 PHE ILE ALA PHE LEU THR GLY PHE LEU ALA LEU VAL THR SEQRES 3 A 418 ILE ILE GLY ASN ILE LEU VAL ILE VAL ALA PHE LYS VAL SEQRES 4 A 418 ASN LYS GLN LEU LYS THR VAL ASN ASN TYR PHE LEU LEU SEQRES 5 A 418 SER LEU ALA CYS ALA ASP LEU ILE ILE GLY VAL ILE SER SEQRES 6 A 418 MET ASN LEU PHE THR THR TYR ILE ILE MET ASN ARG TRP SEQRES 7 A 418 ALA LEU GLY ASN LEU ALA CYS ASP LEU TRP LEU SER ILE SEQRES 8 A 418 ASP TYR VAL ALA SER ASN ALA SER VAL MET ASN LEU LEU SEQRES 9 A 418 VAL ILE SER PHE ASP ARG TYR PHE SER ILE THR ARG PRO SEQRES 10 A 418 LEU THR TYR ARG ALA LYS ARG THR THR LYS ARG ALA GLY SEQRES 11 A 418 VAL MET ILE GLY LEU ALA TRP VAL ILE SER PHE VAL LEU SEQRES 12 A 418 TRP ALA PRO ALA ILE LEU PHE TRP GLN TYR PHE VAL GLY SEQRES 13 A 418 LYS ARG THR VAL PRO PRO GLY GLU CYS PHE ILE GLN PHE SEQRES 14 A 418 LEU SER GLU PRO THR ILE THR PHE GLY THR ALA ILE ALA SEQRES 15 A 418 ALA PHE TYR MET PRO VAL THR ILE MET THR ILE LEU TYR SEQRES 16 A 418 TRP ARG ILE TYR LYS GLU THR GLU LYS MET ASN ILE PHE SEQRES 17 A 418 GLU MET LEU ARG ILE ASP GLU GLY GLY GLY SER GLY GLY SEQRES 18 A 418 ASP GLU ALA GLU LYS LEU PHE ASN GLN ASP VAL ASP ALA SEQRES 19 A 418 ALA VAL ARG GLY ILE LEU ARG ASN ALA LYS LEU LYS PRO SEQRES 20 A 418 VAL TYR ASP SER LEU ASP ALA VAL ARG ARG ALA ALA LEU SEQRES 21 A 418 ILE ASN MET VAL PHE GLN MET GLY GLU THR GLY VAL ALA SEQRES 22 A 418 GLY PHE THR ASN SER LEU ARG MET LEU GLN GLN LYS ARG SEQRES 23 A 418 TRP ASP GLU ALA ALA VAL ASN LEU ALA LYS SER ARG TRP SEQRES 24 A 418 TYR ASN GLN THR PRO ASN ARG ALA LYS ARG VAL ILE THR SEQRES 25 A 418 THR PHE ARG THR GLY THR TRP ASP ALA TYR LEU ILE LYS SEQRES 26 A 418 GLU LYS LYS ALA ALA GLN THR LEU SER ALA ILE LEU LEU SEQRES 27 A 418 ALA PHE ILE ILE THR TRP THR PRO TYR ASN ILE MET VAL SEQRES 28 A 418 LEU VAL ASN THR PHE CYS ASP SER CYS ILE PRO LYS THR SEQRES 29 A 418 TYR TRP ASN LEU GLY TYR TRP LEU CYS TYR ILE ASN SER SEQRES 30 A 418 THR VAL ASN PRO VAL CYS TYR ALA LEU CYS ASN LYS THR SEQRES 31 A 418 PHE ARG THR THR PHE LYS THR LEU LEU LEU CYS GLN CYS SEQRES 32 A 418 ASP LYS ARG LYS ARG ARG LYS HIS HIS HIS HIS HIS HIS SEQRES 33 A 418 HIS HIS SEQRES 1 B 418 GLY ASP PRO LEU GLY GLY HIS THR ILE TRP GLN VAL VAL SEQRES 2 B 418 PHE ILE ALA PHE LEU THR GLY PHE LEU ALA LEU VAL THR SEQRES 3 B 418 ILE ILE GLY ASN ILE LEU VAL ILE VAL ALA PHE LYS VAL SEQRES 4 B 418 ASN LYS GLN LEU LYS THR VAL ASN ASN TYR PHE LEU LEU SEQRES 5 B 418 SER LEU ALA CYS ALA ASP LEU ILE ILE GLY VAL ILE SER SEQRES 6 B 418 MET ASN LEU PHE THR THR TYR ILE ILE MET ASN ARG TRP SEQRES 7 B 418 ALA LEU GLY ASN LEU ALA CYS ASP LEU TRP LEU SER ILE SEQRES 8 B 418 ASP TYR VAL ALA SER ASN ALA SER VAL MET ASN LEU LEU SEQRES 9 B 418 VAL ILE SER PHE ASP ARG TYR PHE SER ILE THR ARG PRO SEQRES 10 B 418 LEU THR TYR ARG ALA LYS ARG THR THR LYS ARG ALA GLY SEQRES 11 B 418 VAL MET ILE GLY LEU ALA TRP VAL ILE SER PHE VAL LEU SEQRES 12 B 418 TRP ALA PRO ALA ILE LEU PHE TRP GLN TYR PHE VAL GLY SEQRES 13 B 418 LYS ARG THR VAL PRO PRO GLY GLU CYS PHE ILE GLN PHE SEQRES 14 B 418 LEU SER GLU PRO THR ILE THR PHE GLY THR ALA ILE ALA SEQRES 15 B 418 ALA PHE TYR MET PRO VAL THR ILE MET THR ILE LEU TYR SEQRES 16 B 418 TRP ARG ILE TYR LYS GLU THR GLU LYS MET ASN ILE PHE SEQRES 17 B 418 GLU MET LEU ARG ILE ASP GLU GLY GLY GLY SER GLY GLY SEQRES 18 B 418 ASP GLU ALA GLU LYS LEU PHE ASN GLN ASP VAL ASP ALA SEQRES 19 B 418 ALA VAL ARG GLY ILE LEU ARG ASN ALA LYS LEU LYS PRO SEQRES 20 B 418 VAL TYR ASP SER LEU ASP ALA VAL ARG ARG ALA ALA LEU SEQRES 21 B 418 ILE ASN MET VAL PHE GLN MET GLY GLU THR GLY VAL ALA SEQRES 22 B 418 GLY PHE THR ASN SER LEU ARG MET LEU GLN GLN LYS ARG SEQRES 23 B 418 TRP ASP GLU ALA ALA VAL ASN LEU ALA LYS SER ARG TRP SEQRES 24 B 418 TYR ASN GLN THR PRO ASN ARG ALA LYS ARG VAL ILE THR SEQRES 25 B 418 THR PHE ARG THR GLY THR TRP ASP ALA TYR LEU ILE LYS SEQRES 26 B 418 GLU LYS LYS ALA ALA GLN THR LEU SER ALA ILE LEU LEU SEQRES 27 B 418 ALA PHE ILE ILE THR TRP THR PRO TYR ASN ILE MET VAL SEQRES 28 B 418 LEU VAL ASN THR PHE CYS ASP SER CYS ILE PRO LYS THR SEQRES 29 B 418 TYR TRP ASN LEU GLY TYR TRP LEU CYS TYR ILE ASN SER SEQRES 30 B 418 THR VAL ASN PRO VAL CYS TYR ALA LEU CYS ASN LYS THR SEQRES 31 B 418 PHE ARG THR THR PHE LYS THR LEU LEU LEU CYS GLN CYS SEQRES 32 B 418 ASP LYS ARG LYS ARG ARG LYS HIS HIS HIS HIS HIS HIS SEQRES 33 B 418 HIS HIS HET 0HK A2001 26 HET P6G A2002 19 HET P6G A2003 19 HET P6G A2004 19 HET TAR A2005 10 HET TAR A2006 10 HET 0HK B1201 26 HET OLC B1202 25 HET OLC B1203 25 HET P6G B1204 19 HET TAR B1205 10 HET TAR B1206 10 HETNAM 0HK (1R,2R,4S,5S,7S)-7-{[HYDROXY(DITHIOPHEN-2-YL) HETNAM 2 0HK ACETYL]OXY}-9,9-DIMETHYL-3-OXA-9- HETNAM 3 0HK AZONIATRICYCLO[3.3.1.0~2,4~]NONANE HETNAM P6G HEXAETHYLENE GLYCOL HETNAM TAR D(-)-TARTARIC ACID HETNAM OLC (2R)-2,3-DIHYDROXYPROPYL (9Z)-OCTADEC-9-ENOATE HETSYN 0HK TIOTROPIUM HETSYN P6G POLYETHYLENE GLYCOL PEG400 HETSYN OLC 1-OLEOYL-R-GLYCEROL FORMUL 3 0HK 2(C19 H22 N O4 S2 1+) FORMUL 4 P6G 4(C12 H26 O7) FORMUL 7 TAR 4(C4 H6 O6) FORMUL 10 OLC 2(C21 H40 O4) FORMUL 15 HOH *(H2 O) HELIX 1 AA1 ILE A 64 ASN A 95 1 32 HELIX 2 AA2 VAL A 101 ILE A 119 1 19 HELIX 3 AA3 ILE A 119 MET A 130 1 12 HELIX 4 AA4 GLY A 136 ARG A 171 1 36 HELIX 5 AA5 THR A 180 GLY A 211 1 32 HELIX 6 AA6 GLU A 227 PHE A 239 1 13 HELIX 7 AA7 PHE A 239 TYR A 254 1 16 HELIX 8 AA8 LYS A 255 GLU A 258 5 4 HELIX 9 AA9 ASN A 1002 GLY A 1012 1 11 HELIX 10 AB1 GLY A 1017 ASN A 1038 1 22 HELIX 11 AB2 LEU A 1041 LEU A 1048 1 8 HELIX 12 AB3 ASP A 1049 GLY A 1070 1 22 HELIX 13 AB4 PHE A 1071 GLN A 1080 1 10 HELIX 14 AB5 ARG A 1082 ALA A 1091 1 10 HELIX 15 AB6 ARG A 1094 THR A 1099 1 6 HELIX 16 AB7 THR A 1099 GLY A 1113 1 15 HELIX 17 AB8 LEU A 482 TRP A 503 1 22 HELIX 18 AB9 TRP A 503 THR A 514 1 12 HELIX 19 AC1 PRO A 521 ILE A 534 1 14 HELIX 20 AC2 ILE A 534 LEU A 545 1 12 HELIX 21 AC3 ASN A 547 LEU A 557 1 11 HELIX 22 AC4 ILE B 64 ASN B 95 1 32 HELIX 23 AC5 THR B 100 ILE B 119 1 20 HELIX 24 AC6 ILE B 119 MET B 130 1 12 HELIX 25 AC7 ASN B 137 ARG B 171 1 35 HELIX 26 AC8 ARG B 171 ALA B 177 1 7 HELIX 27 AC9 THR B 180 TRP B 206 1 27 HELIX 28 AD1 GLU B 227 PHE B 239 1 13 HELIX 29 AD2 PHE B 239 THR B 257 1 19 HELIX 30 AD3 ASN B 1002 GLU B 1011 1 10 HELIX 31 AD4 GLY B 1017 ARG B 1037 1 21 HELIX 32 AD5 LEU B 1041 SER B 1047 1 7 HELIX 33 AD6 ASP B 1049 ALA B 1069 1 21 HELIX 34 AD7 PHE B 1071 GLN B 1080 1 10 HELIX 35 AD8 ARG B 1082 ALA B 1091 1 10 HELIX 36 AD9 SER B 1093 GLN B 1098 1 6 HELIX 37 AE1 THR B 1099 GLY B 1113 1 15 HELIX 38 AE2 LEU B 482 TRP B 503 1 22 HELIX 39 AE3 TRP B 503 THR B 514 1 12 HELIX 40 AE4 PRO B 521 ILE B 534 1 14 HELIX 41 AE5 ILE B 534 ASN B 547 1 14 HELIX 42 AE6 ASN B 547 LEU B 558 1 12 SSBOND 1 CYS A 140 CYS A 220 1555 1555 2.03 SSBOND 2 CYS A 516 CYS A 519 1555 1555 2.03 SSBOND 3 CYS B 140 CYS B 220 1555 1555 2.03 SSBOND 4 CYS B 516 CYS B 519 1555 1555 2.03 CISPEP 1 GLU A 258 LYS A 259 0 -0.64 CISPEP 2 SER B 1015 GLY B 1016 0 0.99 CISPEP 3 GLY B 1016 GLY B 1017 0 10.01 SITE 1 AC1 15 ASP A 147 TYR A 148 SER A 151 ASN A 152 SITE 2 AC1 15 TRP A 199 THR A 231 THR A 234 ALA A 235 SITE 3 AC1 15 ALA A 238 PHE A 239 TRP A 503 TYR A 506 SITE 4 AC1 15 ASN A 507 TYR A 529 CYS A 532 SITE 1 AC2 8 GLY A1014 ALA A1020 PHE A1024 ASP B1027 SITE 2 AC2 8 VAL B1060 PHE B1061 GLY B1064 GLU B1065 SITE 1 AC3 9 GLU A1011 VAL A1060 PHE A1061 GLN A1062 SITE 2 AC3 9 GLY A1064 ARG B1008 GLU B1011 GLY B1013 SITE 3 AC3 9 ASP B1027 SITE 1 AC4 8 THR A1066 GLY A1067 GLY A1070 PHE A1071 SITE 2 AC4 8 TRP A1095 GLN A1098 LYS B 99 ARG B 179 SITE 1 AC5 7 THR A1099 PRO A1100 ASN A1101 ARG A1102 SITE 2 AC5 7 THR B1099 PRO B1100 ASN B1101 SITE 1 AC6 5 PHE A1071 THR A1072 ASN A1073 SER A1074 SITE 2 AC6 5 ASN A1089 SITE 1 AC7 14 ASP B 147 TYR B 148 SER B 151 ASN B 152 SITE 2 AC7 14 THR B 231 ALA B 235 ALA B 238 PHE B 239 SITE 3 AC7 14 TRP B 503 TYR B 506 ASN B 507 TYR B 529 SITE 4 AC7 14 CYS B 532 TYR B 533 SITE 1 AC8 3 THR B 244 THR B 247 TRP B 251 SITE 1 AC9 3 SER B 493 ALA B 494 ILE B 534 SITE 1 AD1 8 PHE B 124 LEU B 144 TYR B 148 PHE B 221 SITE 2 AD1 8 ILE B 222 LEU B 225 TRP B 525 TYR B 529 SITE 1 AD2 5 PHE B1071 THR B1072 ASN B1073 SER B1074 SITE 2 AD2 5 ASN B1089 SITE 1 AD3 5 THR B 100 VAL B 101 ASN B 102 ARG B 176 SITE 2 AD3 5 ARG B 179 CRYST1 152.311 184.563 52.613 90.00 98.54 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006566 0.000000 0.000985 0.00000 SCALE2 0.000000 0.005418 0.000000 0.00000 SCALE3 0.000000 0.000000 0.019220 0.00000