HEADER TRANSFERASE/DNA 30-JUL-14 4U7C TITLE STRUCTURE OF DNA POLYMERASE KAPPA IN COMPLEX WITH BENZOPYRENE ADDUCTED TITLE 2 DNA COMPND MOL_ID: 1; COMPND 2 MOLECULE: DNA POLYMERASE KAPPA; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: UNP RESIDUES 27-518; COMPND 5 SYNONYM: DINB PROTEIN,DINP; COMPND 6 EC: 2.7.7.7; COMPND 7 ENGINEERED: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: DNA (5'-D(P*GP*CP*GP*GP*AP*TP*CP*AP*G)-3'); COMPND 10 CHAIN: C, P; COMPND 11 ENGINEERED: YES; COMPND 12 MOL_ID: 3; COMPND 13 MOLECULE: DNA (5'-D(*P*AP*TP*GP*(VKJ)P*CP*TP*GP*AP*TP*CP*CP*GP*C)- COMPND 14 3'); COMPND 15 CHAIN: D, T; COMPND 16 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: POLK, DINB1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 MOL_ID: 2; SOURCE 11 SYNTHETIC: YES; SOURCE 12 ORGANISM_SCIENTIFIC: UNIDENTIFIED; SOURCE 13 ORGANISM_TAXID: 32644; SOURCE 14 MOL_ID: 3; SOURCE 15 SYNTHETIC: YES; SOURCE 16 ORGANISM_SCIENTIFIC: UNIDENTIFIED; SOURCE 17 ORGANISM_TAXID: 32644 KEYWDS BENZO[A]PYRENE-N2-GUANINE, DNA REPLICATION, DNA DAMAGE TOLERANCE, KEYWDS 2 POLYMERASE KAPPA, ENVIRONMENT POLLUTION, TRANSFERASE-DNA COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR V.K.JHA,H.LING REVDAT 7 27-SEP-23 4U7C 1 LINK REVDAT 6 08-JAN-20 4U7C 1 REMARK REVDAT 5 27-SEP-17 4U7C 1 JRNL REMARK REVDAT 4 15-JUN-16 4U7C 1 JRNL REVDAT 3 13-APR-16 4U7C 1 JRNL REVDAT 2 23-MAR-16 4U7C 1 REMARK REVDAT 1 27-JAN-16 4U7C 0 JRNL AUTH V.JHA,C.BIAN,G.XING,H.LING JRNL TITL STRUCTURE AND MECHANISM OF ERROR-FREE REPLICATION PAST THE JRNL TITL 2 MAJOR BENZO[A]PYRENE ADDUCT BY HUMAN DNA POLYMERASE KAPPA. JRNL REF NUCLEIC ACIDS RES. V. 44 4957 2016 JRNL REFN ESSN 1362-4962 JRNL PMID 27034468 JRNL DOI 10.1093/NAR/GKW204 REMARK 2 REMARK 2 RESOLUTION. 2.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.8.2_1309 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.11 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.1 REMARK 3 NUMBER OF REFLECTIONS : 34189 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.213 REMARK 3 R VALUE (WORKING SET) : 0.212 REMARK 3 FREE R VALUE : 0.252 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 2.570 REMARK 3 FREE R VALUE TEST SET COUNT : 877 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 47.1176 - 5.0862 0.96 5685 139 0.1844 0.1866 REMARK 3 2 5.0862 - 4.0378 0.99 5586 147 0.1850 0.2411 REMARK 3 3 4.0378 - 3.5275 0.99 5562 153 0.2094 0.2875 REMARK 3 4 3.5275 - 3.2051 0.98 5519 128 0.2362 0.3077 REMARK 3 5 3.2051 - 2.9754 0.99 5494 149 0.2918 0.3298 REMARK 3 6 2.9754 - 2.8000 0.98 5466 161 0.3565 0.3868 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.450 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 31.330 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 8005 REMARK 3 ANGLE : 1.057 10995 REMARK 3 CHIRALITY : 0.044 1255 REMARK 3 PLANARITY : 0.004 1234 REMARK 3 DIHEDRAL : 20.598 3095 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4U7C COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 31-JUL-14. REMARK 100 THE DEPOSITION ID IS D_1000202906. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 13-MAY-13 REMARK 200 TEMPERATURE (KELVIN) : 110 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : CLSI REMARK 200 BEAMLINE : 08ID-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.98 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX-300 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 34235 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.800 REMARK 200 RESOLUTION RANGE LOW (A) : 47.111 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.7 REMARK 200 DATA REDUNDANCY : 3.300 REMARK 200 R MERGE (I) : 0.07000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.95 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.4 REMARK 200 DATA REDUNDANCY IN SHELL : 3.30 REMARK 200 R MERGE FOR SHELL (I) : 0.67100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 2OH2 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 55.45 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.76 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 400, AMMONIUM IODIDE, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 295.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 31.82000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 83.15000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 65.08500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 83.15000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 31.82000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 65.08500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4680 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 24440 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -33.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4650 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 23930 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -34.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, P, T REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 27 REMARK 465 MET A 28 REMARK 465 GLU A 29 REMARK 465 GLY A 30 REMARK 465 LEU A 31 REMARK 465 MET A 225 REMARK 465 GLY A 226 REMARK 465 SER A 227 REMARK 465 SER A 228 REMARK 465 VAL A 229 REMARK 465 GLU A 230 REMARK 465 ASN A 231 REMARK 465 ASP A 232 REMARK 465 ASN A 233 REMARK 465 PRO A 234 REMARK 465 GLY A 235 REMARK 465 LYS A 236 REMARK 465 GLU A 237 REMARK 465 VAL A 238 REMARK 465 ASN A 239 REMARK 465 LYS A 240 REMARK 465 LEU A 241 REMARK 465 SER A 242 REMARK 465 GLU A 243 REMARK 465 HIS A 244 REMARK 465 GLU A 245 REMARK 465 ARG A 246 REMARK 465 SER A 247 REMARK 465 ILE A 248 REMARK 465 SER A 249 REMARK 465 PRO A 250 REMARK 465 LEU A 251 REMARK 465 LEU A 252 REMARK 465 PHE A 253 REMARK 465 GLU A 254 REMARK 465 GLU A 255 REMARK 465 SER A 256 REMARK 465 PRO A 257 REMARK 465 SER A 258 REMARK 465 ASP A 259 REMARK 465 VAL A 260 REMARK 465 GLN A 261 REMARK 465 PRO A 262 REMARK 465 PRO A 263 REMARK 465 GLY A 264 REMARK 465 ASP A 265 REMARK 465 PRO A 266 REMARK 465 PHE A 267 REMARK 465 GLN A 268 REMARK 465 VAL A 269 REMARK 465 ASN A 270 REMARK 465 PHE A 271 REMARK 465 GLU A 272 REMARK 465 GLU A 273 REMARK 465 GLN A 274 REMARK 465 ASN A 275 REMARK 465 ASN A 276 REMARK 465 PRO A 277 REMARK 465 GLN A 278 REMARK 465 ILE A 279 REMARK 465 LEU A 280 REMARK 465 GLY B 27 REMARK 465 MET B 28 REMARK 465 GLU B 29 REMARK 465 GLY B 30 REMARK 465 MET B 225 REMARK 465 GLY B 226 REMARK 465 SER B 227 REMARK 465 SER B 228 REMARK 465 VAL B 229 REMARK 465 GLU B 230 REMARK 465 ASN B 231 REMARK 465 ASP B 232 REMARK 465 ASN B 233 REMARK 465 PRO B 234 REMARK 465 GLY B 235 REMARK 465 LYS B 236 REMARK 465 GLU B 237 REMARK 465 VAL B 238 REMARK 465 ASN B 239 REMARK 465 LYS B 240 REMARK 465 LEU B 241 REMARK 465 SER B 242 REMARK 465 GLU B 243 REMARK 465 HIS B 244 REMARK 465 GLU B 245 REMARK 465 ARG B 246 REMARK 465 SER B 247 REMARK 465 ILE B 248 REMARK 465 SER B 249 REMARK 465 PRO B 250 REMARK 465 LEU B 251 REMARK 465 LEU B 252 REMARK 465 PHE B 253 REMARK 465 GLU B 254 REMARK 465 GLU B 255 REMARK 465 SER B 256 REMARK 465 PRO B 257 REMARK 465 SER B 258 REMARK 465 ASP B 259 REMARK 465 VAL B 260 REMARK 465 GLN B 261 REMARK 465 PRO B 262 REMARK 465 PRO B 263 REMARK 465 GLY B 264 REMARK 465 ASP B 265 REMARK 465 PRO B 266 REMARK 465 PHE B 267 REMARK 465 GLN B 268 REMARK 465 VAL B 269 REMARK 465 ASN B 270 REMARK 465 PHE B 271 REMARK 465 GLU B 272 REMARK 465 GLU B 273 REMARK 465 GLN B 274 REMARK 465 ASN B 275 REMARK 465 ASN B 276 REMARK 465 PRO B 277 REMARK 465 GLN B 278 REMARK 465 ILE B 279 REMARK 465 LEU B 280 REMARK 465 GLN B 281 REMARK 465 ASN B 518 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASP A 32 CG OD1 OD2 REMARK 470 LYS A 33 CG CD CE NZ REMARK 470 GLU A 34 CG CD OE1 OE2 REMARK 470 LYS A 35 NZ REMARK 470 LYS A 38 CG CD CE NZ REMARK 470 GLU A 42 CG CD OE1 OE2 REMARK 470 LYS A 45 CG CD CE NZ REMARK 470 LYS A 55 CE NZ REMARK 470 ARG A 88 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 92 CG CD OE1 OE2 REMARK 470 GLN A 95 CG CD OE1 NE2 REMARK 470 SER A 96 OG REMARK 470 ASN A 191 CG OD1 ND2 REMARK 470 ASP A 217 CG OD1 OD2 REMARK 470 LYS A 224 CG CD CE NZ REMARK 470 GLN A 281 CG CD OE1 NE2 REMARK 470 ASP A 410 CG OD1 OD2 REMARK 470 GLU A 412 CG CD OE1 OE2 REMARK 470 ASP A 499 CG OD1 OD2 REMARK 470 PHE A 500 CG CD1 CD2 CE1 CE2 CZ REMARK 470 ASN A 518 CG OD1 ND2 REMARK 470 LEU B 31 CG CD1 CD2 REMARK 470 ASP B 32 CG OD1 OD2 REMARK 470 GLU B 34 CG CD OE1 OE2 REMARK 470 ASN B 37 CG OD1 ND2 REMARK 470 LYS B 38 CG CD CE NZ REMARK 470 ILE B 39 CG1 CG2 CD1 REMARK 470 GLU B 42 CG CD OE1 OE2 REMARK 470 LYS B 58 CE NZ REMARK 470 GLU B 65 CD OE1 OE2 REMARK 470 LEU B 84 CG CD1 CD2 REMARK 470 ARG B 88 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 122 CG CD OE1 OE2 REMARK 470 LYS B 124 CG CD CE NZ REMARK 470 ARG B 145 CG CD NE CZ NH1 NH2 REMARK 470 ARG B 149 CG CD NE CZ NH1 NH2 REMARK 470 GLN B 163 CG CD OE1 NE2 REMARK 470 LYS B 182 CE NZ REMARK 470 ASN B 191 CG OD1 ND2 REMARK 470 GLU B 216 CG CD OE1 OE2 REMARK 470 ASP B 217 CG OD1 OD2 REMARK 470 PHE B 222 CG CD1 CD2 CE1 CE2 CZ REMARK 470 LYS B 224 CG CD CE NZ REMARK 470 SER B 283 OG REMARK 470 VAL B 285 CG1 CG2 REMARK 470 LYS B 347 CG CD CE NZ REMARK 470 LYS B 359 CD CE NZ REMARK 470 ARG B 409 CG CD NE CZ NH1 NH2 REMARK 470 ASP B 410 CG OD1 OD2 REMARK 470 GLU B 412 CG CD OE1 OE2 REMARK 470 ARG B 450 CD NE CZ NH1 NH2 REMARK 470 GLU B 490 CD OE1 OE2 REMARK 470 DA D 2 O5' REMARK 470 DA T 2 O5' REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O9 VKJ T 5 O2 0KX B 603 2.06 REMARK 500 OG SER B 388 OP1 DC T 12 2.10 REMARK 500 OP2 DG C 13 O HOH C 101 2.12 REMARK 500 O VAL B 354 O HOH B 701 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 DG C 8 O4' - C1' - N9 ANGL. DEV. = 2.0 DEGREES REMARK 500 DG P 5 O4' - C1' - N9 ANGL. DEV. = 2.8 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 110 30.08 37.54 REMARK 500 PHE A 111 -86.64 -13.66 REMARK 500 SER A 132 -159.90 -126.14 REMARK 500 CYS A 161 92.36 -162.80 REMARK 500 ASN A 170 76.96 -118.34 REMARK 500 ASN A 191 33.07 -92.34 REMARK 500 MET A 195 -70.46 -76.05 REMARK 500 SER A 196 -146.29 -119.75 REMARK 500 ILE A 204 31.93 -95.72 REMARK 500 ASN A 213 53.62 -100.94 REMARK 500 SER A 324 -18.97 -48.56 REMARK 500 ASN A 330 71.20 49.02 REMARK 500 ASP A 410 105.37 -49.43 REMARK 500 SER A 479 -39.00 -150.34 REMARK 500 LYS B 35 -48.74 64.40 REMARK 500 ALA B 110 26.01 39.18 REMARK 500 PHE B 111 -86.37 -13.02 REMARK 500 ASN B 120 86.90 -151.28 REMARK 500 GLU B 122 1.92 -67.87 REMARK 500 SER B 132 -157.97 -127.61 REMARK 500 THR B 138 -178.42 -170.01 REMARK 500 CYS B 161 92.94 -162.51 REMARK 500 ASN B 191 32.91 -93.59 REMARK 500 MET B 195 -71.43 -76.50 REMARK 500 SER B 196 -147.10 -119.63 REMARK 500 ILE B 204 34.11 -95.02 REMARK 500 ASN B 213 54.93 -103.24 REMARK 500 SER B 324 -19.63 -48.87 REMARK 500 ASN B 330 71.37 47.87 REMARK 500 ASP B 410 106.63 -48.15 REMARK 500 SER B 479 -30.81 -151.44 REMARK 500 PHE B 500 137.64 -39.79 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH D 114 DISTANCE = 5.95 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 601 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 107 OD1 REMARK 620 2 MET A 108 O 94.5 REMARK 620 3 ASP A 198 OD1 98.7 95.4 REMARK 620 4 0KX A 602 O1B 164.5 95.5 92.1 REMARK 620 5 0KX A 602 O2A 81.5 168.2 96.2 86.5 REMARK 620 6 0KX A 602 O2G 84.3 88.9 174.5 84.1 79.7 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 602 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 107 OD1 REMARK 620 2 MET B 108 O 90.5 REMARK 620 3 ASP B 198 OD2 95.4 73.5 REMARK 620 4 0KX B 603 O1A 99.4 169.9 103.5 REMARK 620 5 0KX B 603 O2G 108.1 96.0 154.5 82.7 REMARK 620 6 0KX B 603 O2B 154.0 76.4 59.5 93.7 95.7 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 0KX A 602 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PEG A 603 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG B 602 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 0KX B 603 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PEG B 604 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PEG B 605 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Di-nucleotide DG D 4 and VKJ D REMARK 800 5 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Di-nucleotide VKJ D 5 and DC D REMARK 800 6 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Di-nucleotide DG T 4 and VKJ T REMARK 800 5 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Di-nucleotide VKJ T 5 and DC T REMARK 800 6 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4U6P RELATED DB: PDB DBREF 4U7C A 27 518 UNP Q9UBT6 POLK_HUMAN 27 518 DBREF 4U7C B 27 518 UNP Q9UBT6 POLK_HUMAN 27 518 DBREF 4U7C C 5 13 PDB 4U7C 4U7C 5 13 DBREF 4U7C D 2 14 PDB 4U7C 4U7C 2 14 DBREF 4U7C P 5 13 PDB 4U7C 4U7C 5 13 DBREF 4U7C T 2 14 PDB 4U7C 4U7C 2 14 SEQRES 1 A 492 GLY MET GLU GLY LEU ASP LYS GLU LYS ILE ASN LYS ILE SEQRES 2 A 492 ILE MET GLU ALA THR LYS GLY SER ARG PHE TYR GLY ASN SEQRES 3 A 492 GLU LEU LYS LYS GLU LYS GLN VAL ASN GLN ARG ILE GLU SEQRES 4 A 492 ASN MET MET GLN GLN LYS ALA GLN ILE THR SER GLN GLN SEQRES 5 A 492 LEU ARG LYS ALA GLN LEU GLN VAL ASP ARG PHE ALA MET SEQRES 6 A 492 GLU LEU GLU GLN SER ARG ASN LEU SER ASN THR ILE VAL SEQRES 7 A 492 HIS ILE ASP MET ASP ALA PHE TYR ALA ALA VAL GLU MET SEQRES 8 A 492 ARG ASP ASN PRO GLU LEU LYS ASP LYS PRO ILE ALA VAL SEQRES 9 A 492 GLY SER MET SER MET LEU SER THR SER ASN TYR HIS ALA SEQRES 10 A 492 ARG ARG PHE GLY VAL ARG ALA ALA MET PRO GLY PHE ILE SEQRES 11 A 492 ALA LYS ARG LEU CYS PRO GLN LEU ILE ILE VAL PRO PRO SEQRES 12 A 492 ASN PHE ASP LYS TYR ARG ALA VAL SER LYS GLU VAL LYS SEQRES 13 A 492 GLU ILE LEU ALA ASP TYR ASP PRO ASN PHE MET ALA MET SEQRES 14 A 492 SER LEU ASP GLU ALA TYR LEU ASN ILE THR LYS HIS LEU SEQRES 15 A 492 GLU GLU ARG GLN ASN TRP PRO GLU ASP LYS ARG ARG TYR SEQRES 16 A 492 PHE ILE LYS MET GLY SER SER VAL GLU ASN ASP ASN PRO SEQRES 17 A 492 GLY LYS GLU VAL ASN LYS LEU SER GLU HIS GLU ARG SER SEQRES 18 A 492 ILE SER PRO LEU LEU PHE GLU GLU SER PRO SER ASP VAL SEQRES 19 A 492 GLN PRO PRO GLY ASP PRO PHE GLN VAL ASN PHE GLU GLU SEQRES 20 A 492 GLN ASN ASN PRO GLN ILE LEU GLN ASN SER VAL VAL PHE SEQRES 21 A 492 GLY THR SER ALA GLN GLU VAL VAL LYS GLU ILE ARG PHE SEQRES 22 A 492 ARG ILE GLU GLN LYS THR THR LEU THR ALA SER ALA GLY SEQRES 23 A 492 ILE ALA PRO ASN THR MET LEU ALA LYS VAL CYS SER ASP SEQRES 24 A 492 LYS ASN LYS PRO ASN GLY GLN TYR GLN ILE LEU PRO ASN SEQRES 25 A 492 ARG GLN ALA VAL MET ASP PHE ILE LYS ASP LEU PRO ILE SEQRES 26 A 492 ARG LYS VAL SER GLY ILE GLY LYS VAL THR GLU LYS MET SEQRES 27 A 492 LEU LYS ALA LEU GLY ILE ILE THR CYS THR GLU LEU TYR SEQRES 28 A 492 GLN GLN ARG ALA LEU LEU SER LEU LEU PHE SER GLU THR SEQRES 29 A 492 SER TRP HIS TYR PHE LEU HIS ILE SER LEU GLY LEU GLY SEQRES 30 A 492 SER THR HIS LEU THR ARG ASP GLY GLU ARG LYS SER MET SEQRES 31 A 492 SER VAL GLU ARG THR PHE SER GLU ILE ASN LYS ALA GLU SEQRES 32 A 492 GLU GLN TYR SER LEU CYS GLN GLU LEU CYS SER GLU LEU SEQRES 33 A 492 ALA GLN ASP LEU GLN LYS GLU ARG LEU LYS GLY ARG THR SEQRES 34 A 492 VAL THR ILE LYS LEU LYS ASN VAL ASN PHE GLU VAL LYS SEQRES 35 A 492 THR ARG ALA SER THR VAL SER SER VAL VAL SER THR ALA SEQRES 36 A 492 GLU GLU ILE PHE ALA ILE ALA LYS GLU LEU LEU LYS THR SEQRES 37 A 492 GLU ILE ASP ALA ASP PHE PRO HIS PRO LEU ARG LEU ARG SEQRES 38 A 492 LEU MET GLY VAL ARG ILE SER SER PHE PRO ASN SEQRES 1 B 492 GLY MET GLU GLY LEU ASP LYS GLU LYS ILE ASN LYS ILE SEQRES 2 B 492 ILE MET GLU ALA THR LYS GLY SER ARG PHE TYR GLY ASN SEQRES 3 B 492 GLU LEU LYS LYS GLU LYS GLN VAL ASN GLN ARG ILE GLU SEQRES 4 B 492 ASN MET MET GLN GLN LYS ALA GLN ILE THR SER GLN GLN SEQRES 5 B 492 LEU ARG LYS ALA GLN LEU GLN VAL ASP ARG PHE ALA MET SEQRES 6 B 492 GLU LEU GLU GLN SER ARG ASN LEU SER ASN THR ILE VAL SEQRES 7 B 492 HIS ILE ASP MET ASP ALA PHE TYR ALA ALA VAL GLU MET SEQRES 8 B 492 ARG ASP ASN PRO GLU LEU LYS ASP LYS PRO ILE ALA VAL SEQRES 9 B 492 GLY SER MET SER MET LEU SER THR SER ASN TYR HIS ALA SEQRES 10 B 492 ARG ARG PHE GLY VAL ARG ALA ALA MET PRO GLY PHE ILE SEQRES 11 B 492 ALA LYS ARG LEU CYS PRO GLN LEU ILE ILE VAL PRO PRO SEQRES 12 B 492 ASN PHE ASP LYS TYR ARG ALA VAL SER LYS GLU VAL LYS SEQRES 13 B 492 GLU ILE LEU ALA ASP TYR ASP PRO ASN PHE MET ALA MET SEQRES 14 B 492 SER LEU ASP GLU ALA TYR LEU ASN ILE THR LYS HIS LEU SEQRES 15 B 492 GLU GLU ARG GLN ASN TRP PRO GLU ASP LYS ARG ARG TYR SEQRES 16 B 492 PHE ILE LYS MET GLY SER SER VAL GLU ASN ASP ASN PRO SEQRES 17 B 492 GLY LYS GLU VAL ASN LYS LEU SER GLU HIS GLU ARG SER SEQRES 18 B 492 ILE SER PRO LEU LEU PHE GLU GLU SER PRO SER ASP VAL SEQRES 19 B 492 GLN PRO PRO GLY ASP PRO PHE GLN VAL ASN PHE GLU GLU SEQRES 20 B 492 GLN ASN ASN PRO GLN ILE LEU GLN ASN SER VAL VAL PHE SEQRES 21 B 492 GLY THR SER ALA GLN GLU VAL VAL LYS GLU ILE ARG PHE SEQRES 22 B 492 ARG ILE GLU GLN LYS THR THR LEU THR ALA SER ALA GLY SEQRES 23 B 492 ILE ALA PRO ASN THR MET LEU ALA LYS VAL CYS SER ASP SEQRES 24 B 492 LYS ASN LYS PRO ASN GLY GLN TYR GLN ILE LEU PRO ASN SEQRES 25 B 492 ARG GLN ALA VAL MET ASP PHE ILE LYS ASP LEU PRO ILE SEQRES 26 B 492 ARG LYS VAL SER GLY ILE GLY LYS VAL THR GLU LYS MET SEQRES 27 B 492 LEU LYS ALA LEU GLY ILE ILE THR CYS THR GLU LEU TYR SEQRES 28 B 492 GLN GLN ARG ALA LEU LEU SER LEU LEU PHE SER GLU THR SEQRES 29 B 492 SER TRP HIS TYR PHE LEU HIS ILE SER LEU GLY LEU GLY SEQRES 30 B 492 SER THR HIS LEU THR ARG ASP GLY GLU ARG LYS SER MET SEQRES 31 B 492 SER VAL GLU ARG THR PHE SER GLU ILE ASN LYS ALA GLU SEQRES 32 B 492 GLU GLN TYR SER LEU CYS GLN GLU LEU CYS SER GLU LEU SEQRES 33 B 492 ALA GLN ASP LEU GLN LYS GLU ARG LEU LYS GLY ARG THR SEQRES 34 B 492 VAL THR ILE LYS LEU LYS ASN VAL ASN PHE GLU VAL LYS SEQRES 35 B 492 THR ARG ALA SER THR VAL SER SER VAL VAL SER THR ALA SEQRES 36 B 492 GLU GLU ILE PHE ALA ILE ALA LYS GLU LEU LEU LYS THR SEQRES 37 B 492 GLU ILE ASP ALA ASP PHE PRO HIS PRO LEU ARG LEU ARG SEQRES 38 B 492 LEU MET GLY VAL ARG ILE SER SER PHE PRO ASN SEQRES 1 C 9 DG DC DG DG DA DT DC DA DG SEQRES 1 D 13 DA DT DG VKJ DC DT DG DA DT DC DC DG DC SEQRES 1 P 9 DG DC DG DG DA DT DC DA DG SEQRES 1 T 13 DA DT DG VKJ DC DT DG DA DT DC DC DG DC HET VKJ D 5 45 HET VKJ T 5 45 HET MG A 601 1 HET 0KX A 602 28 HET PEG A 603 7 HET EDO B 601 4 HET MG B 602 1 HET 0KX B 603 28 HET PEG B 604 7 HET PEG B 605 7 HETNAM VKJ 2'-DEOXY-N-[(7R,8S,9R,10S)-7,8,9-TRIHYDROXY-7,8,9,10- HETNAM 2 VKJ TETRAHYDROBENZO[PQR]TETRAPHEN-10-YL]GUANOSINE 5'- HETNAM 3 VKJ (DIHYDROGEN PHOSPHATE) HETNAM MG MAGNESIUM ION HETNAM 0KX 2'-DEOXY-5'-O-[(R)-HYDROXY{[(R)-HYDROXY(PHOSPHONOOXY) HETNAM 2 0KX PHOSPHORYL]AMINO}PHOSPHORYL]CYTIDINE HETNAM PEG DI(HYDROXYETHYL)ETHER HETNAM EDO 1,2-ETHANEDIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 4 VKJ 2(C30 H28 N5 O10 P) FORMUL 7 MG 2(MG 2+) FORMUL 8 0KX 2(C9 H17 N4 O12 P3) FORMUL 9 PEG 3(C4 H10 O3) FORMUL 10 EDO C2 H6 O2 FORMUL 15 HOH *113(H2 O) HELIX 1 AA1 ASP A 32 LYS A 45 1 14 HELIX 2 AA2 SER A 47 GLN A 73 1 27 HELIX 3 AA3 THR A 75 SER A 96 1 22 HELIX 4 AA4 ALA A 110 ASP A 119 1 10 HELIX 5 AA5 ASN A 120 LYS A 124 5 5 HELIX 6 AA6 ASN A 140 ARG A 145 1 6 HELIX 7 AA7 PRO A 153 CYS A 161 1 9 HELIX 8 AA8 ASN A 170 ALA A 186 1 17 HELIX 9 AA9 ILE A 204 GLN A 212 1 9 HELIX 10 AB1 PRO A 215 LYS A 218 5 4 HELIX 11 AB2 SER A 289 THR A 306 1 18 HELIX 12 AB3 ASN A 316 SER A 324 1 9 HELIX 13 AB4 ASN A 338 LYS A 347 1 10 HELIX 14 AB5 ASP A 348 LEU A 349 5 2 HELIX 15 AB6 PRO A 350 VAL A 354 5 5 HELIX 16 AB7 GLY A 358 LEU A 368 1 11 HELIX 17 AB8 THR A 372 GLN A 379 1 8 HELIX 18 AB9 GLN A 379 PHE A 387 1 9 HELIX 19 AC1 SER A 388 GLY A 401 1 14 HELIX 20 AC2 LYS A 427 ARG A 450 1 24 HELIX 21 AC3 THR A 480 PHE A 500 1 21 HELIX 22 AC4 ASP B 32 LYS B 45 1 14 HELIX 23 AC5 SER B 47 GLN B 73 1 27 HELIX 24 AC6 THR B 75 SER B 96 1 22 HELIX 25 AC7 ALA B 110 ASP B 119 1 10 HELIX 26 AC8 ASN B 120 LYS B 124 5 5 HELIX 27 AC9 ASN B 140 ARG B 145 1 6 HELIX 28 AD1 PRO B 153 CYS B 161 1 9 HELIX 29 AD2 ASN B 170 ALA B 186 1 17 HELIX 30 AD3 ILE B 204 GLN B 212 1 9 HELIX 31 AD4 PRO B 215 LYS B 218 5 4 HELIX 32 AD5 SER B 289 THR B 306 1 18 HELIX 33 AD6 ASN B 316 SER B 324 1 9 HELIX 34 AD7 ASN B 338 LYS B 347 1 10 HELIX 35 AD8 ASP B 348 LEU B 349 5 2 HELIX 36 AD9 PRO B 350 VAL B 354 5 5 HELIX 37 AE1 GLY B 358 LEU B 368 1 11 HELIX 38 AE2 THR B 372 GLN B 379 1 8 HELIX 39 AE3 GLN B 379 PHE B 387 1 9 HELIX 40 AE4 SER B 388 GLY B 401 1 14 HELIX 41 AE5 LYS B 427 ARG B 450 1 24 HELIX 42 AE6 THR B 480 PHE B 500 1 21 SHEET 1 AA1 5 MET A 193 ALA A 194 0 SHEET 2 AA1 5 GLU A 199 ASN A 203 -1 O TYR A 201 N MET A 193 SHEET 3 AA1 5 ILE A 103 MET A 108 -1 N VAL A 104 O LEU A 202 SHEET 4 AA1 5 ALA A 309 ALA A 314 -1 O ALA A 314 N ILE A 103 SHEET 5 AA1 5 GLN A 332 GLN A 334 1 O TYR A 333 N ILE A 313 SHEET 1 AA2 3 LEU A 136 SER A 139 0 SHEET 2 AA2 3 ILE A 128 GLY A 131 -1 N VAL A 130 O THR A 138 SHEET 3 AA2 3 ILE A 165 VAL A 167 1 O ILE A 165 N ALA A 129 SHEET 1 AA3 2 ARG A 220 PHE A 222 0 SHEET 2 AA3 2 SER A 283 VAL A 285 -1 O VAL A 284 N TYR A 221 SHEET 1 AA4 4 SER A 415 ILE A 425 0 SHEET 2 AA4 4 LEU A 506 SER A 514 -1 O ILE A 513 N MET A 416 SHEET 3 AA4 4 GLY A 453 ASN A 462 -1 N THR A 457 O ARG A 512 SHEET 4 AA4 4 VAL A 467 VAL A 478 -1 O VAL A 478 N GLY A 453 SHEET 1 AA5 5 MET B 193 ALA B 194 0 SHEET 2 AA5 5 GLU B 199 ASN B 203 -1 O TYR B 201 N MET B 193 SHEET 3 AA5 5 ILE B 103 MET B 108 -1 N VAL B 104 O LEU B 202 SHEET 4 AA5 5 ALA B 309 ALA B 314 -1 O SER B 310 N ASP B 107 SHEET 5 AA5 5 GLN B 332 GLN B 334 1 O TYR B 333 N ILE B 313 SHEET 1 AA6 3 LEU B 136 SER B 139 0 SHEET 2 AA6 3 ILE B 128 GLY B 131 -1 N VAL B 130 O THR B 138 SHEET 3 AA6 3 ILE B 165 VAL B 167 1 O ILE B 165 N ALA B 129 SHEET 1 AA7 2 ARG B 220 PHE B 222 0 SHEET 2 AA7 2 SER B 283 VAL B 285 -1 O VAL B 284 N TYR B 221 SHEET 1 AA8 4 SER B 415 ILE B 425 0 SHEET 2 AA8 4 LEU B 506 SER B 514 -1 O ILE B 513 N MET B 416 SHEET 3 AA8 4 GLY B 453 ASN B 462 -1 N THR B 457 O ARG B 512 SHEET 4 AA8 4 VAL B 467 VAL B 478 -1 O VAL B 478 N GLY B 453 LINK O3' DG D 4 P1 VKJ D 5 1555 1555 1.52 LINK O3 VKJ D 5 P DC D 6 1555 1555 1.50 LINK O3' DG T 4 P1 VKJ T 5 1555 1555 1.59 LINK O3 VKJ T 5 P DC T 6 1555 1555 1.58 LINK OD1 ASP A 107 MG MG A 601 1555 1555 2.12 LINK O MET A 108 MG MG A 601 1555 1555 2.07 LINK OD1 ASP A 198 MG MG A 601 1555 1555 2.28 LINK MG MG A 601 O1B 0KX A 602 1555 1555 2.32 LINK MG MG A 601 O2A 0KX A 602 1555 1555 2.21 LINK MG MG A 601 O2G 0KX A 602 1555 1555 2.18 LINK OD1 ASP B 107 MG MG B 602 1555 1555 2.01 LINK O MET B 108 MG MG B 602 1555 1555 2.73 LINK OD2 ASP B 198 MG MG B 602 1555 1555 2.69 LINK MG MG B 602 O1A 0KX B 603 1555 1555 2.29 LINK MG MG B 602 O2G 0KX B 603 1555 1555 2.10 LINK MG MG B 602 O2B 0KX B 603 1555 1555 2.29 CISPEP 1 LYS A 328 PRO A 329 0 -0.20 CISPEP 2 PHE A 500 PRO A 501 0 7.96 CISPEP 3 LYS B 328 PRO B 329 0 -1.80 CISPEP 4 PHE B 500 PRO B 501 0 7.36 SITE 1 AC1 4 ASP A 107 MET A 108 ASP A 198 0KX A 602 SITE 1 AC2 14 ASP A 107 MET A 108 ALA A 110 PHE A 111 SITE 2 AC2 14 TYR A 112 SER A 137 THR A 138 TYR A 141 SITE 3 AC2 14 ARG A 144 ASP A 198 LYS A 328 MG A 601 SITE 4 AC2 14 DG C 13 VKJ D 5 SITE 1 AC3 4 LYS A 459 LYS A 461 VAL A 467 DA C 9 SITE 1 AC4 5 GLY B 131 SER B 132 MET B 135 PRO B 169 SITE 2 AC4 5 VKJ T 5 SITE 1 AC5 4 ASP B 107 MET B 108 ASP B 198 0KX B 603 SITE 1 AC6 13 ASP B 107 MET B 108 ALA B 110 PHE B 111 SITE 2 AC6 13 SER B 137 THR B 138 TYR B 141 ARG B 144 SITE 3 AC6 13 ASP B 198 LYS B 328 MG B 602 DG P 13 SITE 4 AC6 13 VKJ T 5 SITE 1 AC7 3 PHE B 171 HOH B 726 VKJ T 5 SITE 1 AC8 3 TYR B 432 LYS B 489 HOH B 710 SITE 1 AC9 19 THR A 44 SER A 47 PHE A 49 TYR A 112 SITE 2 AC9 19 SER A 134 MET A 135 SER A 137 ALA A 151 SITE 3 AC9 19 PRO A 153 PRO A 169 THR A 421 ARG A 507 SITE 4 AC9 19 0KX A 602 HOH A 708 HOH A 722 DG C 13 SITE 5 AC9 19 DT D 3 DC D 6 HOH D 108 SITE 1 AD1 18 TYR A 112 MET A 135 SER A 137 ALA A 151 SITE 2 AD1 18 PRO A 169 GLU A 419 THR A 421 ARG A 507 SITE 3 AD1 18 LEU A 508 0KX A 602 HOH A 708 HOH A 722 SITE 4 AD1 18 DG C 13 DG D 4 DT D 7 HOH D 101 SITE 5 AD1 18 HOH D 108 HOH D 109 SITE 1 AD2 18 THR B 44 SER B 47 PHE B 49 TYR B 112 SITE 2 AD2 18 SER B 134 MET B 135 ALA B 151 PRO B 153 SITE 3 AD2 18 ILE B 156 PHE B 171 ARG B 507 EDO B 601 SITE 4 AD2 18 0KX B 603 PEG B 604 HOH B 726 DG P 13 SITE 5 AD2 18 DT T 3 DC T 6 SITE 1 AD3 16 TYR B 112 MET B 135 ALA B 151 PHE B 171 SITE 2 AD3 16 GLU B 419 THR B 421 ARG B 507 LEU B 508 SITE 3 AD3 16 EDO B 601 0KX B 603 PEG B 604 HOH B 712 SITE 4 AD3 16 HOH B 726 DG P 13 DG T 4 DT T 7 CRYST1 63.640 130.170 166.300 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015713 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007682 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006013 0.00000