HEADER TRANSFERASE 31-JUL-14 4U7O TITLE ACTIVE HISTIDINE KINASE BOUND WITH ATP COMPND MOL_ID: 1; COMPND 2 MOLECULE: HISTIDINE PROTEIN KINASE SENSOR PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: UNP RESIDUES 370-624; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: LACTOBACILLUS PLANTARUM; SOURCE 3 ORGANISM_TAXID: 644042; SOURCE 4 STRAIN: JDM1; SOURCE 5 GENE: HPK1, JDM1_0052; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS HISTIDINE KINASE, PHOSPHORYLTRANSFERASE, ATP, ACTIVE STATE, KEYWDS 2 ASYMMETRIC BENDING, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR Y.CAI,X.HU,J.SANG REVDAT 4 08-NOV-23 4U7O 1 REMARK REVDAT 3 25-OCT-17 4U7O 1 JRNL REVDAT 2 18-OCT-17 4U7O 1 REMARK REVDAT 1 02-SEP-15 4U7O 0 JRNL AUTH Y.CAI,M.SU,A.AHMAD,X.HU,J.SANG,L.KONG,X.CHEN,C.WANG,J.SHUAI, JRNL AUTH 2 A.HAN JRNL TITL CONFORMATIONAL DYNAMICS OF THE ESSENTIAL SENSOR HISTIDINE JRNL TITL 2 KINASE WALK. JRNL REF ACTA CRYSTALLOGR D STRUCT V. 73 793 2017 JRNL REF 2 BIOL JRNL REFN ISSN 2059-7983 JRNL PMID 28994408 JRNL DOI 10.1107/S2059798317013043 REMARK 2 REMARK 2 RESOLUTION. 2.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.8.4_1496) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 13.99 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 3 NUMBER OF REFLECTIONS : 25012 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.200 REMARK 3 R VALUE (WORKING SET) : 0.198 REMARK 3 FREE R VALUE : 0.239 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.040 REMARK 3 FREE R VALUE TEST SET COUNT : 1260 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 13.9902 - 4.9168 0.98 2753 126 0.1712 0.2257 REMARK 3 2 4.9168 - 3.9311 0.99 2694 126 0.1617 0.1855 REMARK 3 3 3.9311 - 3.4426 1.00 2673 126 0.1967 0.2043 REMARK 3 4 3.4426 - 3.1317 1.00 2515 252 0.2216 0.2790 REMARK 3 5 3.1317 - 2.9094 1.00 2665 126 0.2399 0.2948 REMARK 3 6 2.9094 - 2.7392 1.00 2631 126 0.2427 0.2863 REMARK 3 7 2.7392 - 2.6030 1.00 2635 126 0.2399 0.3200 REMARK 3 8 2.6030 - 2.4903 1.00 2613 126 0.2548 0.2930 REMARK 3 9 2.4903 - 2.3949 0.97 2573 126 0.2709 0.2915 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.280 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 25.480 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.011 3747 REMARK 3 ANGLE : 1.440 5068 REMARK 3 CHIRALITY : 0.059 569 REMARK 3 PLANARITY : 0.007 643 REMARK 3 DIHEDRAL : 14.073 1410 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 5 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN A AND (RESID 372 THROUGH 446 ) REMARK 3 ORIGIN FOR THE GROUP (A): -11.2010 4.0195 -20.6251 REMARK 3 T TENSOR REMARK 3 T11: 0.5276 T22: 0.5507 REMARK 3 T33: 0.4814 T12: 0.0038 REMARK 3 T13: -0.0291 T23: -0.0623 REMARK 3 L TENSOR REMARK 3 L11: 0.8523 L22: 1.8282 REMARK 3 L33: 0.7810 L12: -0.1836 REMARK 3 L13: -0.7833 L23: 0.4585 REMARK 3 S TENSOR REMARK 3 S11: 0.1146 S12: 0.0237 S13: 0.0557 REMARK 3 S21: -0.1746 S22: 0.0577 S23: 0.1175 REMARK 3 S31: 0.0961 S32: -0.0441 S33: -0.0001 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN A AND (RESID 447 THROUGH 610 ) REMARK 3 ORIGIN FOR THE GROUP (A): -1.4795 27.0733 -28.3834 REMARK 3 T TENSOR REMARK 3 T11: 0.3815 T22: 0.4573 REMARK 3 T33: 0.4636 T12: 0.0165 REMARK 3 T13: -0.0567 T23: -0.0122 REMARK 3 L TENSOR REMARK 3 L11: 1.4088 L22: 1.5797 REMARK 3 L33: 1.4874 L12: 0.2321 REMARK 3 L13: -0.3785 L23: 0.1670 REMARK 3 S TENSOR REMARK 3 S11: -0.0036 S12: 0.0643 S13: 0.1322 REMARK 3 S21: 0.1194 S22: 0.0968 S23: -0.1005 REMARK 3 S31: 0.0048 S32: 0.1995 S33: 0.0078 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN B AND (RESID 384 THROUGH 442 ) REMARK 3 ORIGIN FOR THE GROUP (A): -10.2918 -1.0150 -9.9198 REMARK 3 T TENSOR REMARK 3 T11: 0.6696 T22: 0.6266 REMARK 3 T33: 0.4991 T12: 0.0241 REMARK 3 T13: -0.0085 T23: -0.0353 REMARK 3 L TENSOR REMARK 3 L11: 1.1976 L22: 2.0177 REMARK 3 L33: 1.8955 L12: -0.7557 REMARK 3 L13: 0.2208 L23: -0.4877 REMARK 3 S TENSOR REMARK 3 S11: -0.4461 S12: -0.2081 S13: 0.1898 REMARK 3 S21: 0.5409 S22: 0.4517 S23: 0.0408 REMARK 3 S31: -0.1155 S32: -0.1751 S33: 0.2565 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN B AND (RESID 443 THROUGH 476 ) REMARK 3 ORIGIN FOR THE GROUP (A): -16.9045 -3.0128 -0.2061 REMARK 3 T TENSOR REMARK 3 T11: 0.6254 T22: 0.6199 REMARK 3 T33: 0.6895 T12: 0.0223 REMARK 3 T13: 0.1079 T23: -0.0229 REMARK 3 L TENSOR REMARK 3 L11: 0.1258 L22: 0.4380 REMARK 3 L33: 0.6112 L12: 0.1403 REMARK 3 L13: -0.2146 L23: -0.0039 REMARK 3 S TENSOR REMARK 3 S11: -0.1167 S12: 0.3978 S13: -0.4236 REMARK 3 S21: 0.4808 S22: 0.2575 S23: 0.1235 REMARK 3 S31: 0.0547 S32: 0.4183 S33: 0.0097 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN B AND (RESID 477 THROUGH 610 ) REMARK 3 ORIGIN FOR THE GROUP (A): -19.5917 8.7843 5.6410 REMARK 3 T TENSOR REMARK 3 T11: 0.6268 T22: 0.5322 REMARK 3 T33: 0.5020 T12: 0.0035 REMARK 3 T13: 0.0961 T23: 0.0339 REMARK 3 L TENSOR REMARK 3 L11: 1.9839 L22: 2.3543 REMARK 3 L33: 2.3535 L12: -0.6460 REMARK 3 L13: -0.8873 L23: 1.5160 REMARK 3 S TENSOR REMARK 3 S11: 0.0905 S12: 0.0255 S13: 0.0968 REMARK 3 S21: -0.2818 S22: -0.0850 S23: 0.0546 REMARK 3 S31: -0.2433 S32: 0.0127 S33: 0.0005 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4U7O COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 14-AUG-14. REMARK 100 THE DEPOSITION ID IS D_1000202689. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 04-MAY-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.8 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL17U REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97924 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 25170 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.395 REMARK 200 RESOLUTION RANGE LOW (A) : 25.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 200 DATA REDUNDANCY : 6.400 REMARK 200 R MERGE (I) : 0.10000 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 38.1640 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.44 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 7.30 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 4.160 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: 4I5S REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.86 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.67 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: AMMONIUM SULFATE, PEG 4000, PH 5.8, REMARK 280 VAPOR DIFFUSION, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 27.26400 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 58.18450 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 49.19450 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 58.18450 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 27.26400 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 49.19450 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4620 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 22390 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -38.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 348 REMARK 465 GLY A 349 REMARK 465 SER A 350 REMARK 465 SER A 351 REMARK 465 HIS A 352 REMARK 465 HIS A 353 REMARK 465 HIS A 354 REMARK 465 HIS A 355 REMARK 465 HIS A 356 REMARK 465 HIS A 357 REMARK 465 SER A 358 REMARK 465 SER A 359 REMARK 465 GLY A 360 REMARK 465 LEU A 361 REMARK 465 VAL A 362 REMARK 465 PRO A 363 REMARK 465 ARG A 364 REMARK 465 GLY A 365 REMARK 465 SER A 366 REMARK 465 ALA A 367 REMARK 465 GLU A 368 REMARK 465 PHE A 369 REMARK 465 HIS A 370 REMARK 465 ASP A 371 REMARK 465 ALA A 565 REMARK 465 ARG A 566 REMARK 465 SER A 567 REMARK 465 ARG A 568 REMARK 465 ALA A 569 REMARK 465 PRO A 611 REMARK 465 TYR A 612 REMARK 465 GLU A 613 REMARK 465 GLU A 614 REMARK 465 GLU A 615 REMARK 465 ASP A 616 REMARK 465 LEU A 617 REMARK 465 TRP A 618 REMARK 465 ASP A 619 REMARK 465 ASP A 620 REMARK 465 ASP A 621 REMARK 465 SER A 622 REMARK 465 GLN A 623 REMARK 465 ALA A 624 REMARK 465 MET B 348 REMARK 465 GLY B 349 REMARK 465 SER B 350 REMARK 465 SER B 351 REMARK 465 HIS B 352 REMARK 465 HIS B 353 REMARK 465 HIS B 354 REMARK 465 HIS B 355 REMARK 465 HIS B 356 REMARK 465 HIS B 357 REMARK 465 SER B 358 REMARK 465 SER B 359 REMARK 465 GLY B 360 REMARK 465 LEU B 361 REMARK 465 VAL B 362 REMARK 465 PRO B 363 REMARK 465 ARG B 364 REMARK 465 GLY B 365 REMARK 465 SER B 366 REMARK 465 ALA B 367 REMARK 465 GLU B 368 REMARK 465 PHE B 369 REMARK 465 HIS B 370 REMARK 465 ASP B 371 REMARK 465 VAL B 372 REMARK 465 THR B 373 REMARK 465 GLU B 374 REMARK 465 GLN B 375 REMARK 465 GLN B 376 REMARK 465 LYS B 377 REMARK 465 ILE B 378 REMARK 465 ASP B 379 REMARK 465 ASN B 380 REMARK 465 ASP B 381 REMARK 465 ARG B 382 REMARK 465 LYS B 383 REMARK 465 ARG B 444 REMARK 465 MET B 445 REMARK 465 ASP B 446 REMARK 465 SER B 447 REMARK 465 GLY B 448 REMARK 465 THR B 449 REMARK 465 SER B 567 REMARK 465 ARG B 568 REMARK 465 ALA B 569 REMARK 465 PRO B 611 REMARK 465 TYR B 612 REMARK 465 GLU B 613 REMARK 465 GLU B 614 REMARK 465 GLU B 615 REMARK 465 ASP B 616 REMARK 465 LEU B 617 REMARK 465 TRP B 618 REMARK 465 ASP B 619 REMARK 465 ASP B 620 REMARK 465 ASP B 621 REMARK 465 SER B 622 REMARK 465 GLN B 623 REMARK 465 ALA B 624 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OG1 THR A 373 O HOH A 817 1.93 REMARK 500 O LEU B 545 O HOH B 806 2.14 REMARK 500 NH1 ARG B 528 O HOH B 801 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER B 519 67.41 -108.47 REMARK 500 LYS B 564 -156.77 -136.39 REMARK 500 TYR B 609 -68.08 -93.79 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue AN2 A 701 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue AN2 B 701 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4U7N RELATED DB: PDB DBREF 4U7O A 370 624 UNP C6VIM1 C6VIM1_LACPJ 370 624 DBREF 4U7O B 370 624 UNP C6VIM1 C6VIM1_LACPJ 370 624 SEQADV 4U7O MET A 348 UNP C6VIM1 EXPRESSION TAG SEQADV 4U7O GLY A 349 UNP C6VIM1 EXPRESSION TAG SEQADV 4U7O SER A 350 UNP C6VIM1 EXPRESSION TAG SEQADV 4U7O SER A 351 UNP C6VIM1 EXPRESSION TAG SEQADV 4U7O HIS A 352 UNP C6VIM1 EXPRESSION TAG SEQADV 4U7O HIS A 353 UNP C6VIM1 EXPRESSION TAG SEQADV 4U7O HIS A 354 UNP C6VIM1 EXPRESSION TAG SEQADV 4U7O HIS A 355 UNP C6VIM1 EXPRESSION TAG SEQADV 4U7O HIS A 356 UNP C6VIM1 EXPRESSION TAG SEQADV 4U7O HIS A 357 UNP C6VIM1 EXPRESSION TAG SEQADV 4U7O SER A 358 UNP C6VIM1 EXPRESSION TAG SEQADV 4U7O LEU A 361 UNP C6VIM1 EXPRESSION TAG SEQADV 4U7O VAL A 362 UNP C6VIM1 EXPRESSION TAG SEQADV 4U7O PRO A 363 UNP C6VIM1 EXPRESSION TAG SEQADV 4U7O ARG A 364 UNP C6VIM1 EXPRESSION TAG SEQADV 4U7O GLY A 365 UNP C6VIM1 EXPRESSION TAG SEQADV 4U7O SER A 366 UNP C6VIM1 EXPRESSION TAG SEQADV 4U7O ALA A 367 UNP C6VIM1 EXPRESSION TAG SEQADV 4U7O GLU A 368 UNP C6VIM1 EXPRESSION TAG SEQADV 4U7O PHE A 369 UNP C6VIM1 EXPRESSION TAG SEQADV 4U7O MET B 348 UNP C6VIM1 EXPRESSION TAG SEQADV 4U7O GLY B 349 UNP C6VIM1 EXPRESSION TAG SEQADV 4U7O SER B 350 UNP C6VIM1 EXPRESSION TAG SEQADV 4U7O SER B 351 UNP C6VIM1 EXPRESSION TAG SEQADV 4U7O HIS B 352 UNP C6VIM1 EXPRESSION TAG SEQADV 4U7O HIS B 353 UNP C6VIM1 EXPRESSION TAG SEQADV 4U7O HIS B 354 UNP C6VIM1 EXPRESSION TAG SEQADV 4U7O HIS B 355 UNP C6VIM1 EXPRESSION TAG SEQADV 4U7O HIS B 356 UNP C6VIM1 EXPRESSION TAG SEQADV 4U7O HIS B 357 UNP C6VIM1 EXPRESSION TAG SEQADV 4U7O SER B 358 UNP C6VIM1 EXPRESSION TAG SEQADV 4U7O LEU B 361 UNP C6VIM1 EXPRESSION TAG SEQADV 4U7O VAL B 362 UNP C6VIM1 EXPRESSION TAG SEQADV 4U7O PRO B 363 UNP C6VIM1 EXPRESSION TAG SEQADV 4U7O ARG B 364 UNP C6VIM1 EXPRESSION TAG SEQADV 4U7O GLY B 365 UNP C6VIM1 EXPRESSION TAG SEQADV 4U7O SER B 366 UNP C6VIM1 EXPRESSION TAG SEQADV 4U7O ALA B 367 UNP C6VIM1 EXPRESSION TAG SEQADV 4U7O GLU B 368 UNP C6VIM1 EXPRESSION TAG SEQADV 4U7O PHE B 369 UNP C6VIM1 EXPRESSION TAG SEQRES 1 A 277 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 277 LEU VAL PRO ARG GLY SER ALA GLU PHE HIS ASP VAL THR SEQRES 3 A 277 GLU GLN GLN LYS ILE ASP ASN ASP ARG LYS GLN PHE VAL SEQRES 4 A 277 SER ASN VAL SER HIS GLU LEU ARG THR PRO LEU THR SER SEQRES 5 A 277 LEU ARG SER TYR ILE GLU ALA LEU SER ASP GLY ALA TRP SEQRES 6 A 277 LYS ASP PRO GLU VAL ALA PRO GLY PHE LEU LYS VAL THR SEQRES 7 A 277 GLN GLU GLU THR ASP ARG MET ILE ARG MET ILE ASN GLU SEQRES 8 A 277 LEU LEU SER LEU SER ARG MET ASP SER GLY THR THR ARG SEQRES 9 A 277 VAL ASP MET GLU LEU VAL ASN ILE ASN GLU MET PHE ASN SEQRES 10 A 277 TYR VAL LEU ASP ARG PHE ASP MET ILE LEU LYS LYS ASP SEQRES 11 A 277 ASP ASN PRO ALA LYS TYR TYR THR ILE LYS ARG GLU PHE SEQRES 12 A 277 THR LYS ARG ASP LEU TRP VAL GLU ILE ASP THR ASP LYS SEQRES 13 A 277 PHE THR GLN VAL LEU ASP ASN ILE MET ASN ASN ALA ILE SEQRES 14 A 277 LYS TYR SER PRO ASP GLY GLY VAL VAL THR CYS ARG LEU SEQRES 15 A 277 LEU GLU THR HIS ASN GLN VAL ILE ILE SER ILE SER ASP SEQRES 16 A 277 GLN GLY LEU GLY ILE PRO ARG ALA ASP LEU GLY HIS VAL SEQRES 17 A 277 PHE ASP ARG PHE PHE ARG VAL ASP LYS ALA ARG SER ARG SEQRES 18 A 277 ALA GLN GLY GLY THR GLY LEU GLY LEU ALA ILE SER LYS SEQRES 19 A 277 GLU VAL VAL GLN MET LEU GLY GLY ARG ILE TRP VAL ASP SEQRES 20 A 277 SER VAL GLU GLY LYS GLY SER THR PHE TYR ILE SER LEU SEQRES 21 A 277 PRO TYR GLU PRO TYR GLU GLU GLU ASP LEU TRP ASP ASP SEQRES 22 A 277 ASP SER GLN ALA SEQRES 1 B 277 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 B 277 LEU VAL PRO ARG GLY SER ALA GLU PHE HIS ASP VAL THR SEQRES 3 B 277 GLU GLN GLN LYS ILE ASP ASN ASP ARG LYS GLN PHE VAL SEQRES 4 B 277 SER ASN VAL SER HIS GLU LEU ARG THR PRO LEU THR SER SEQRES 5 B 277 LEU ARG SER TYR ILE GLU ALA LEU SER ASP GLY ALA TRP SEQRES 6 B 277 LYS ASP PRO GLU VAL ALA PRO GLY PHE LEU LYS VAL THR SEQRES 7 B 277 GLN GLU GLU THR ASP ARG MET ILE ARG MET ILE ASN GLU SEQRES 8 B 277 LEU LEU SER LEU SER ARG MET ASP SER GLY THR THR ARG SEQRES 9 B 277 VAL ASP MET GLU LEU VAL ASN ILE ASN GLU MET PHE ASN SEQRES 10 B 277 TYR VAL LEU ASP ARG PHE ASP MET ILE LEU LYS LYS ASP SEQRES 11 B 277 ASP ASN PRO ALA LYS TYR TYR THR ILE LYS ARG GLU PHE SEQRES 12 B 277 THR LYS ARG ASP LEU TRP VAL GLU ILE ASP THR ASP LYS SEQRES 13 B 277 PHE THR GLN VAL LEU ASP ASN ILE MET ASN ASN ALA ILE SEQRES 14 B 277 LYS TYR SER PRO ASP GLY GLY VAL VAL THR CYS ARG LEU SEQRES 15 B 277 LEU GLU THR HIS ASN GLN VAL ILE ILE SER ILE SER ASP SEQRES 16 B 277 GLN GLY LEU GLY ILE PRO ARG ALA ASP LEU GLY HIS VAL SEQRES 17 B 277 PHE ASP ARG PHE PHE ARG VAL ASP LYS ALA ARG SER ARG SEQRES 18 B 277 ALA GLN GLY GLY THR GLY LEU GLY LEU ALA ILE SER LYS SEQRES 19 B 277 GLU VAL VAL GLN MET LEU GLY GLY ARG ILE TRP VAL ASP SEQRES 20 B 277 SER VAL GLU GLY LYS GLY SER THR PHE TYR ILE SER LEU SEQRES 21 B 277 PRO TYR GLU PRO TYR GLU GLU GLU ASP LEU TRP ASP ASP SEQRES 22 B 277 ASP SER GLN ALA HET AN2 A 701 27 HET AN2 B 701 27 HETNAM AN2 AMP PHOSPHORAMIDATE FORMUL 3 AN2 2(C10 H16 N6 O9 P2) FORMUL 5 HOH *34(H2 O) HELIX 1 AA1 VAL A 372 ASP A 409 1 38 HELIX 2 AA2 GLY A 410 ASP A 414 5 5 HELIX 3 AA3 VAL A 417 SER A 447 1 31 HELIX 4 AA4 ILE A 459 LYS A 476 1 18 HELIX 5 AA5 ASP A 500 TYR A 518 1 19 HELIX 6 AA6 PRO A 548 LEU A 552 5 5 HELIX 7 AA7 GLY A 553 ASP A 557 5 5 HELIX 8 AA8 LEU A 575 LEU A 587 1 13 HELIX 9 AA9 PHE B 385 ASP B 409 1 25 HELIX 10 AB1 GLY B 410 ASP B 414 5 5 HELIX 11 AB2 VAL B 417 SER B 443 1 27 HELIX 12 AB3 ILE B 459 LYS B 476 1 18 HELIX 13 AB4 ASP B 500 TYR B 518 1 19 HELIX 14 AB5 PRO B 548 LEU B 552 5 5 HELIX 15 AB6 GLY B 553 ASP B 557 5 5 HELIX 16 AB7 LEU B 575 LEU B 587 1 13 SHEET 1 AA1 2 GLU A 455 ASN A 458 0 SHEET 2 AA1 2 TRP A 496 ILE A 499 -1 O ILE A 499 N GLU A 455 SHEET 1 AA2 5 TYR A 484 PHE A 490 0 SHEET 2 AA2 5 GLY A 523 GLU A 531 1 O VAL A 525 N THR A 485 SHEET 3 AA2 5 GLN A 535 ASP A 542 -1 O ILE A 537 N LEU A 530 SHEET 4 AA2 5 GLY A 600 PRO A 608 -1 O LEU A 607 N VAL A 536 SHEET 5 AA2 5 ARG A 590 VAL A 596 -1 N ASP A 594 O THR A 602 SHEET 1 AA3 2 GLU B 455 ASN B 458 0 SHEET 2 AA3 2 TRP B 496 ILE B 499 -1 O ILE B 499 N GLU B 455 SHEET 1 AA4 5 TYR B 484 PHE B 490 0 SHEET 2 AA4 5 GLY B 523 THR B 532 1 O VAL B 525 N THR B 485 SHEET 3 AA4 5 GLN B 535 ASP B 542 -1 O ILE B 537 N LEU B 530 SHEET 4 AA4 5 GLY B 600 PRO B 608 -1 O ILE B 605 N ILE B 538 SHEET 5 AA4 5 ARG B 590 VAL B 596 -1 N ARG B 590 O SER B 606 CISPEP 1 ASP A 478 ASN A 479 0 -10.36 SITE 1 AC1 19 ASN A 510 ASN A 514 TYR A 518 ASP A 542 SITE 2 AC1 19 ILE A 547 VAL A 555 PHE A 560 ARG A 561 SITE 3 AC1 19 VAL A 562 GLY A 572 THR A 573 GLY A 574 SITE 4 AC1 19 LEU A 575 GLY A 576 LEU A 577 PHE A 603 SITE 5 AC1 19 HOH A 811 HOH A 815 HOH A 816 SITE 1 AC2 21 HIS B 391 ASN B 514 LYS B 517 TYR B 518 SITE 2 AC2 21 ASP B 542 LEU B 545 GLY B 546 ILE B 547 SITE 3 AC2 21 PHE B 560 ARG B 561 VAL B 562 GLY B 572 SITE 4 AC2 21 THR B 573 GLY B 574 LEU B 575 GLY B 576 SITE 5 AC2 21 LEU B 577 SER B 601 PHE B 603 HOH B 806 SITE 6 AC2 21 HOH B 816 CRYST1 54.528 98.389 116.369 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018339 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010164 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008593 0.00000