HEADER    TRANSFERASE/TRANSFERASE REGULATOR       31-JUL-14   4U7P              
TITLE     CRYSTAL STRUCTURE OF DNMT3A-DNMT3L COMPLEX                            
COMPND    MOL_ID: 1;                                                            
COMPND   2 MOLECULE: DNA (CYTOSINE-5)-METHYLTRANSFERASE 3A;                     
COMPND   3 CHAIN: A;                                                            
COMPND   4 FRAGMENT: UNP RESIDUES 455-912;                                      
COMPND   5 SYNONYM: DNA METHYLTRANSFERASES DNMT3A;                              
COMPND   6 EC: 2.1.1.37;                                                        
COMPND   7 ENGINEERED: YES;                                                     
COMPND   8 MOL_ID: 2;                                                           
COMPND   9 MOLECULE: DNA (CYTOSINE-5)-METHYLTRANSFERASE 3-LIKE;                 
COMPND  10 CHAIN: B;                                                            
COMPND  11 FRAGMENT: UNP RESIDUES 178-379;                                      
COMPND  12 SYNONYM: DNA METHYLTRANSFERASES DNMT3L;                              
COMPND  13 ENGINEERED: YES                                                      
SOURCE    MOL_ID: 1;                                                            
SOURCE   2 ORGANISM_SCIENTIFIC: HOMO SAPIENS;                                   
SOURCE   3 ORGANISM_COMMON: HUMAN;                                              
SOURCE   4 ORGANISM_TAXID: 9606;                                                
SOURCE   5 GENE: DNMT3A;                                                        
SOURCE   6 EXPRESSION_SYSTEM: ESCHERICHIA COLI;                                 
SOURCE   7 EXPRESSION_SYSTEM_TAXID: 562;                                        
SOURCE   8 MOL_ID: 2;                                                           
SOURCE   9 ORGANISM_SCIENTIFIC: HOMO SAPIENS;                                   
SOURCE  10 ORGANISM_COMMON: HUMAN;                                              
SOURCE  11 ORGANISM_TAXID: 9606;                                                
SOURCE  12 GENE: DNMT3L;                                                        
SOURCE  13 EXPRESSION_SYSTEM: ESCHERICHIA COLI;                                 
SOURCE  14 EXPRESSION_SYSTEM_TAXID: 562                                         
KEYWDS    DNA METHYLTRANSFERASE, AUTOINHIBITORY FORM, TRANSFERASE-TRANSFERASE   
KEYWDS   2 REGULATOR COMPLEX                                                    
EXPDTA    X-RAY DIFFRACTION                                                     
AUTHOR    L.WANG,X.GUO,J.LI,J.XIAO,X.YIN,S.HE,J.WANG,Y.XU                       
REVDAT   4   08-NOV-23 4U7P    1       SOURCE REMARK                            
REVDAT   3   04-FEB-15 4U7P    1       JRNL                                     
REVDAT   2   17-DEC-14 4U7P    1       JRNL                                     
REVDAT   1   12-NOV-14 4U7P    0                                                
JRNL        AUTH   X.GUO,L.WANG,J.LI,Z.DING,J.XIAO,X.YIN,S.HE,P.SHI,L.DONG,     
JRNL        AUTH 2 G.LI,C.TIAN,J.WANG,Y.CONG,Y.XU                               
JRNL        TITL   STRUCTURAL INSIGHT INTO AUTOINHIBITION AND HISTONE           
JRNL        TITL 2 H3-INDUCED ACTIVATION OF DNMT3A                              
JRNL        REF    NATURE                        V. 517   640 2015              
JRNL        REFN                   ISSN 0028-0836                               
JRNL        PMID   25383530                                                     
JRNL        DOI    10.1038/NATURE13899                                          
REMARK   2                                                                      
REMARK   2 RESOLUTION.    3.82 ANGSTROMS.                                       
REMARK   3                                                                      
REMARK   3 REFINEMENT.                                                          
REMARK   3   PROGRAM     : PHENIX (PHENIX.REFINE: 1.9_1692)                     
REMARK   3   AUTHORS     : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN            
REMARK   3               : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE,           
REMARK   3               : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER,            
REMARK   3               : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY,              
REMARK   3               : REETAL PAI,RANDY READ,JANE RICHARDSON,               
REMARK   3               : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI,           
REMARK   3               : NICHOLAS SAUTER,JACOB SMITH,LAURENT                  
REMARK   3               : STORONI,TOM TERWILLIGER,PETER ZWART                  
REMARK   3                                                                      
REMARK   3    REFINEMENT TARGET : ML                                            
REMARK   3                                                                      
REMARK   3  DATA USED IN REFINEMENT.                                            
REMARK   3   RESOLUTION RANGE HIGH (ANGSTROMS) : 3.82                           
REMARK   3   RESOLUTION RANGE LOW  (ANGSTROMS) : 42.01                          
REMARK   3   MIN(FOBS/SIGMA_FOBS)              : 1.330                          
REMARK   3   COMPLETENESS FOR RANGE        (%) : 79.2                           
REMARK   3   NUMBER OF REFLECTIONS             : 13977                          
REMARK   3                                                                      
REMARK   3  FIT TO DATA USED IN REFINEMENT.                                     
REMARK   3   R VALUE     (WORKING + TEST SET) : 0.229                           
REMARK   3   R VALUE            (WORKING SET) : 0.224                           
REMARK   3   FREE R VALUE                     : 0.269                           
REMARK   3   FREE R VALUE TEST SET SIZE   (%) : 9.900                           
REMARK   3   FREE R VALUE TEST SET COUNT      : 1392                            
REMARK   3                                                                      
REMARK   3  FIT TO DATA USED IN REFINEMENT (IN BINS).                           
REMARK   3   BIN  RESOLUTION RANGE  COMPL.    NWORK NFREE   RWORK  RFREE        
REMARK   3     1 42.0077 -  9.3907    0.99     1540   171  0.2032 0.2412        
REMARK   3     2  9.3907 -  7.4674    1.00     1567   177  0.2051 0.2253        
REMARK   3     3  7.4674 -  6.5274    1.00     1597   136  0.2169 0.2477        
REMARK   3     4  6.5274 -  5.9324    1.00     1562   168  0.2082 0.2411        
REMARK   3     5  5.9324 -  5.5082    1.00     1551   185  0.1918 0.2509        
REMARK   3     6  5.5082 -  5.1841    1.00     1561   169  0.1960 0.2697        
REMARK   3     7  5.1841 -  4.9249    0.99     1554   151  0.1939 0.2431        
REMARK   3     8  4.9249 -  4.7108    0.97     1498   167  0.2001 0.2229        
REMARK   3     9  4.7108 -  4.5296    0.80     1224   160  0.2253 0.2927        
REMARK   3    10  4.5296 -  4.3735    0.56      885    98  0.2471 0.3362        
REMARK   3    11  4.3735 -  4.2369    0.54      817    99  0.2589 0.2981        
REMARK   3    12  4.2369 -  4.1159    0.53      829    96  0.2748 0.3589        
REMARK   3    13  4.1159 -  4.0076    0.53      817    92  0.3009 0.3499        
REMARK   3    14  4.0076 -  3.9099    0.52      802   102  0.3167 0.3183        
REMARK   3    15  3.9099 -  3.8211    0.45      720    65  0.3248 0.3406        
REMARK   3                                                                      
REMARK   3  BULK SOLVENT MODELLING.                                             
REMARK   3   METHOD USED        : FLAT BULK SOLVENT MODEL                       
REMARK   3   SOLVENT RADIUS     : 1.11                                          
REMARK   3   SHRINKAGE RADIUS   : 0.90                                          
REMARK   3   K_SOL              : NULL                                          
REMARK   3   B_SOL              : NULL                                          
REMARK   3                                                                      
REMARK   3  ERROR ESTIMATES.                                                    
REMARK   3   COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED)     : 0.450            
REMARK   3   PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 25.850           
REMARK   3                                                                      
REMARK   3  B VALUES.                                                           
REMARK   3   FROM WILSON PLOT           (A**2) : 46.31                          
REMARK   3   MEAN B VALUE      (OVERALL, A**2) : 78.33                          
REMARK   3   OVERALL ANISOTROPIC B VALUE.                                       
REMARK   3    B11 (A**2) : NULL                                                 
REMARK   3    B22 (A**2) : NULL                                                 
REMARK   3    B33 (A**2) : NULL                                                 
REMARK   3    B12 (A**2) : NULL                                                 
REMARK   3    B13 (A**2) : NULL                                                 
REMARK   3    B23 (A**2) : NULL                                                 
REMARK   3                                                                      
REMARK   3  TWINNING INFORMATION.                                               
REMARK   3   FRACTION: NULL                                                     
REMARK   3   OPERATOR: NULL                                                     
REMARK   3                                                                      
REMARK   3  DEVIATIONS FROM IDEAL VALUES.                                       
REMARK   3                 RMSD          COUNT                                  
REMARK   3   BOND      :  0.006           5218                                  
REMARK   3   ANGLE     :  0.977           7072                                  
REMARK   3   CHIRALITY :  0.036            744                                  
REMARK   3   PLANARITY :  0.005            916                                  
REMARK   3   DIHEDRAL  : 14.243           1944                                  
REMARK   3                                                                      
REMARK   3  TLS DETAILS                                                         
REMARK   3   NUMBER OF TLS GROUPS  : NULL                                       
REMARK   3                                                                      
REMARK   3  NCS DETAILS                                                         
REMARK   3   NUMBER OF NCS GROUPS : NULL                                        
REMARK   3                                                                      
REMARK   3  OTHER REFINEMENT REMARKS: NULL                                      
REMARK   4                                                                      
REMARK   4 4U7P COMPLIES WITH FORMAT V. 3.30, 13-JUL-11                         
REMARK 100                                                                      
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 07-AUG-14.                  
REMARK 100 THE DEPOSITION ID IS D_1000202950.                                   
REMARK 200                                                                      
REMARK 200 EXPERIMENTAL DETAILS                                                 
REMARK 200  EXPERIMENT TYPE                : X-RAY DIFFRACTION                  
REMARK 200  DATE OF DATA COLLECTION        : 10-NOV-13                          
REMARK 200  TEMPERATURE           (KELVIN) : 100                                
REMARK 200  PH                             : 5.6-6.0                            
REMARK 200  NUMBER OF CRYSTALS USED        : 1                                  
REMARK 200                                                                      
REMARK 200  SYNCHROTRON              (Y/N) : Y                                  
REMARK 200  RADIATION SOURCE               : SSRF                               
REMARK 200  BEAMLINE                       : BL17U                              
REMARK 200  X-RAY GENERATOR MODEL          : NULL                               
REMARK 200  MONOCHROMATIC OR LAUE    (M/L) : M                                  
REMARK 200  WAVELENGTH OR RANGE        (A) : 1.2816                             
REMARK 200  MONOCHROMATOR                  : SAGITALLY FOCUSED SI(111)          
REMARK 200  OPTICS                         : NULL                               
REMARK 200                                                                      
REMARK 200  DETECTOR TYPE                  : CCD                                
REMARK 200  DETECTOR MANUFACTURER          : ADSC QUANTUM 315R                  
REMARK 200  INTENSITY-INTEGRATION SOFTWARE : HKL-2000                           
REMARK 200  DATA SCALING SOFTWARE          : HKL-2000                           
REMARK 200                                                                      
REMARK 200  NUMBER OF UNIQUE REFLECTIONS   : 14153                              
REMARK 200  RESOLUTION RANGE HIGH      (A) : 3.820                              
REMARK 200  RESOLUTION RANGE LOW       (A) : 50.000                             
REMARK 200  REJECTION CRITERIA  (SIGMA(I)) : NULL                               
REMARK 200                                                                      
REMARK 200 OVERALL.                                                             
REMARK 200  COMPLETENESS FOR RANGE     (%) : 99.9                               
REMARK 200  DATA REDUNDANCY                : 5.700                              
REMARK 200  R MERGE                    (I) : 0.09800                            
REMARK 200  R SYM                      (I) : NULL                               
REMARK 200  <I/SIGMA(I)> FOR THE DATA SET  : 6.9000                             
REMARK 200                                                                      
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.                                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.82                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE LOW  (A) : 3.96                     
REMARK 200  COMPLETENESS FOR SHELL     (%) : 99.9                               
REMARK 200  DATA REDUNDANCY IN SHELL       : 5.80                               
REMARK 200  R MERGE FOR SHELL          (I) : 0.87000                            
REMARK 200  R SYM FOR SHELL            (I) : NULL                               
REMARK 200  <I/SIGMA(I)> FOR SHELL         : NULL                               
REMARK 200                                                                      
REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH                              
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT        
REMARK 200 SOFTWARE USED: PHASER                                                
REMARK 200 STARTING MODEL: 2QRV, 3A1A                                           
REMARK 200                                                                      
REMARK 200 REMARK: NULL                                                         
REMARK 280                                                                      
REMARK 280 CRYSTAL                                                              
REMARK 280 SOLVENT CONTENT, VS   (%): 72.41                                     
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.46                     
REMARK 280                                                                      
REMARK 280 CRYSTALLIZATION CONDITIONS: 0.05M BIS-TRIS, 0.1M SODIUM MALONATE,    
REMARK 280  8% PEG3350, PH 5.6, VAPOR DIFFUSION, TEMPERATURE 291K               
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY                                            
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 63 2 2                         
REMARK 290                                                                      
REMARK 290      SYMOP   SYMMETRY                                                
REMARK 290     NNNMMM   OPERATOR                                                
REMARK 290       1555   X,Y,Z                                                   
REMARK 290       2555   -Y,X-Y,Z                                                
REMARK 290       3555   -X+Y,-X,Z                                               
REMARK 290       4555   -X,-Y,Z+1/2                                             
REMARK 290       5555   Y,-X+Y,Z+1/2                                            
REMARK 290       6555   X-Y,X,Z+1/2                                             
REMARK 290       7555   Y,X,-Z                                                  
REMARK 290       8555   X-Y,-Y,-Z                                               
REMARK 290       9555   -X,-X+Y,-Z                                              
REMARK 290      10555   -Y,-X,-Z+1/2                                            
REMARK 290      11555   -X+Y,Y,-Z+1/2                                           
REMARK 290      12555   X,X-Y,-Z+1/2                                            
REMARK 290                                                                      
REMARK 290     WHERE NNN -> OPERATOR NUMBER                                     
REMARK 290           MMM -> TRANSLATION VECTOR                                  
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS                            
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM             
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY                
REMARK 290 RELATED MOLECULES.                                                   
REMARK 290   SMTRY1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 290   SMTRY1   2 -0.500000 -0.866025  0.000000        0.00000            
REMARK 290   SMTRY2   2  0.866025 -0.500000  0.000000        0.00000            
REMARK 290   SMTRY3   2  0.000000  0.000000  1.000000        0.00000            
REMARK 290   SMTRY1   3 -0.500000  0.866025  0.000000        0.00000            
REMARK 290   SMTRY2   3 -0.866025 -0.500000  0.000000        0.00000            
REMARK 290   SMTRY3   3  0.000000  0.000000  1.000000        0.00000            
REMARK 290   SMTRY1   4 -1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   4  0.000000 -1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   4  0.000000  0.000000  1.000000       37.66800            
REMARK 290   SMTRY1   5  0.500000  0.866025  0.000000        0.00000            
REMARK 290   SMTRY2   5 -0.866025  0.500000  0.000000        0.00000            
REMARK 290   SMTRY3   5  0.000000  0.000000  1.000000       37.66800            
REMARK 290   SMTRY1   6  0.500000 -0.866025  0.000000        0.00000            
REMARK 290   SMTRY2   6  0.866025  0.500000  0.000000        0.00000            
REMARK 290   SMTRY3   6  0.000000  0.000000  1.000000       37.66800            
REMARK 290   SMTRY1   7 -0.500000  0.866025  0.000000        0.00000            
REMARK 290   SMTRY2   7  0.866025  0.500000  0.000000        0.00000            
REMARK 290   SMTRY3   7  0.000000  0.000000 -1.000000        0.00000            
REMARK 290   SMTRY1   8  1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   8  0.000000 -1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   8  0.000000  0.000000 -1.000000        0.00000            
REMARK 290   SMTRY1   9 -0.500000 -0.866025  0.000000        0.00000            
REMARK 290   SMTRY2   9 -0.866025  0.500000  0.000000        0.00000            
REMARK 290   SMTRY3   9  0.000000  0.000000 -1.000000        0.00000            
REMARK 290   SMTRY1  10  0.500000 -0.866025  0.000000        0.00000            
REMARK 290   SMTRY2  10 -0.866025 -0.500000  0.000000        0.00000            
REMARK 290   SMTRY3  10  0.000000  0.000000 -1.000000       37.66800            
REMARK 290   SMTRY1  11 -1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2  11  0.000000  1.000000  0.000000        0.00000            
REMARK 290   SMTRY3  11  0.000000  0.000000 -1.000000       37.66800            
REMARK 290   SMTRY1  12  0.500000  0.866025  0.000000        0.00000            
REMARK 290   SMTRY2  12  0.866025 -0.500000  0.000000        0.00000            
REMARK 290   SMTRY3  12  0.000000  0.000000 -1.000000       37.66800            
REMARK 290                                                                      
REMARK 290 REMARK: NULL                                                         
REMARK 300                                                                      
REMARK 300 BIOMOLECULE: 1                                                       
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM                
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN                  
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON               
REMARK 300 BURIED SURFACE AREA.                                                 
REMARK 300 REMARK: BIOLOGICAL UNIT IS THE SAME AS ASYM.                         
REMARK 350                                                                      
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN           
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE                
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS          
REMARK 350 GIVEN BELOW.  BOTH NON-CRYSTALLOGRAPHIC AND                          
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.                               
REMARK 350                                                                      
REMARK 350 BIOMOLECULE: 1                                                       
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC                           
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC                    
REMARK 350 SOFTWARE USED: PISA                                                  
REMARK 350 TOTAL BURIED SURFACE AREA: 1810 ANGSTROM**2                          
REMARK 350 SURFACE AREA OF THE COMPLEX: 29790 ANGSTROM**2                       
REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -6.0 KCAL/MOL                         
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B                                  
REMARK 350   BIOMT1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 350   BIOMT2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 350   BIOMT3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 465                                                                      
REMARK 465 MISSING RESIDUES                                                     
REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE                       
REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN               
REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.)                
REMARK 465                                                                      
REMARK 465   M RES C SSSEQI                                                     
REMARK 465     GLY A   447                                                      
REMARK 465     PRO A   448                                                      
REMARK 465     LEU A   449                                                      
REMARK 465     GLY A   450                                                      
REMARK 465     SER A   451                                                      
REMARK 465     PRO A   452                                                      
REMARK 465     GLU A   453                                                      
REMARK 465     PHE A   454                                                      
REMARK 465     LYS A   455                                                      
REMARK 465     LYS A   456                                                      
REMARK 465     PRO A   457                                                      
REMARK 465     ARG A   458                                                      
REMARK 465     LYS A   459                                                      
REMARK 465     SER A   460                                                      
REMARK 465     THR A   461                                                      
REMARK 465     ALA A   462                                                      
REMARK 465     GLU A   463                                                      
REMARK 465     LYS A   464                                                      
REMARK 465     PRO A   465                                                      
REMARK 465     LYS A   466                                                      
REMARK 465     VAL A   467                                                      
REMARK 465     LYS A   468                                                      
REMARK 465     GLU A   469                                                      
REMARK 465     ILE A   470                                                      
REMARK 465     ILE A   471                                                      
REMARK 465     ASP A   472                                                      
REMARK 465     GLU A   473                                                      
REMARK 465     ILE A   833                                                      
REMARK 465     THR A   834                                                      
REMARK 465     THR A   835                                                      
REMARK 465     ARG A   836                                                      
REMARK 465     SER A   837                                                      
REMARK 465     ASN A   838                                                      
REMARK 465     SER A   839                                                      
REMARK 465     ILE A   840                                                      
REMARK 465     LYS A   841                                                      
REMARK 465     GLN A   842                                                      
REMARK 465     GLY A   843                                                      
REMARK 465     LYS A   844                                                      
REMARK 465     ASP A   845                                                      
REMARK 465     GLY B   171                                                      
REMARK 465     PRO B   172                                                      
REMARK 465     LEU B   173                                                      
REMARK 465     GLY B   174                                                      
REMARK 465     SER B   175                                                      
REMARK 465     GLU B   176                                                      
REMARK 465     PHE B   177                                                      
REMARK 465     MET B   178                                                      
REMARK 465     LYS B   354                                                      
REMARK 465     LEU B   355                                                      
REMARK 465     ALA B   356                                                      
REMARK 465     SER B   379                                                      
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT                     
REMARK 500                                                                      
REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT.                            
REMARK 500                                                                      
REMARK 500  ATM1  RES C  SSEQI   ATM2  RES C  SSEQI           DISTANCE          
REMARK 500   O    TYR A   528     OG   SER A   535              2.04            
REMARK 500   NZ   LYS B   376     O    PHE B   378              2.13            
REMARK 500   OE2  GLU A   733     NH1  ARG A   736              2.19            
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: TORSION ANGLES                                             
REMARK 500                                                                      
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:            
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                             
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)                    
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-           
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400            
REMARK 500                                                                      
REMARK 500  M RES CSSEQI        PSI       PHI                                   
REMARK 500    SER A 496      -72.90    -84.64                                   
REMARK 500    SER A 535      -23.65     64.03                                   
REMARK 500    TYR A 536     -134.56     40.54                                   
REMARK 500    CYS A 541       19.43     58.90                                   
REMARK 500    ARG A 544      -72.52   -110.85                                   
REMARK 500    CYS A 554      -71.20   -119.71                                   
REMARK 500    LYS A 577       -4.58     82.09                                   
REMARK 500    ASP A 618       79.76     52.26                                   
REMARK 500    PHE A 640       71.89     53.42                                   
REMARK 500    ALA A 644       59.80    -63.12                                   
REMARK 500    VAL A 665      -62.04   -105.14                                   
REMARK 500    CYS A 666      105.93    -45.01                                   
REMARK 500    HIS A 677       10.76   -142.38                                   
REMARK 500    CYS A 710      -76.93    -88.54                                   
REMARK 500    ASN A 711     -108.93     50.11                                   
REMARK 500    ASP A 712       -6.41    -57.63                                   
REMARK 500    ARG A 729      -38.38    -35.20                                   
REMARK 500    VAL A 785      -14.12   -144.26                                   
REMARK 500    ARG A 831      -66.22   -130.79                                   
REMARK 500    HIS A 847      -73.72    -76.74                                   
REMARK 500    SER A 878     -150.62     57.13                                   
REMARK 500    PRO B 183      153.18    -49.72                                   
REMARK 500    ARG B 186       -6.54   -146.23                                   
REMARK 500    PHE B 196      -31.65     63.90                                   
REMARK 500    GLU B 210      -77.90    -82.26                                   
REMARK 500    SER B 211      176.47    174.10                                   
REMARK 500    SER B 213      -62.57   -139.28                                   
REMARK 500    PRO B 215       63.86   -100.46                                   
REMARK 500    VAL B 224       31.44    -95.43                                   
REMARK 500    ASP B 226       63.36   -114.62                                   
REMARK 500    TRP B 235       23.86    -75.13                                   
REMARK 500    THR B 251     -141.30     48.02                                   
REMARK 500    CYS B 252      -64.25   -132.63                                   
REMARK 500    ASP B 253     -114.87     57.10                                   
REMARK 500    ASN B 287       55.09   -101.93                                   
REMARK 500    LEU B 317       87.62    -64.75                                   
REMARK 500    ILE B 330      -55.59   -135.07                                   
REMARK 500    ARG B 333      -88.60   -121.08                                   
REMARK 500    HIS B 334      -21.58     57.74                                   
REMARK 500    TRP B 335     -156.89     43.71                                   
REMARK 500    ALA B 336      -63.17   -145.96                                   
REMARK 500    GLN B 351      -74.47   -121.34                                   
REMARK 500    PRO B 370        9.25    -69.14                                   
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 620                                                                      
REMARK 620 METAL COORDINATION                                                   
REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE):                             
REMARK 620                                                                      
REMARK 620 COORDINATION ANGLES FOR:  M RES CSSEQI METAL                         
REMARK 620                              ZN A1002  ZN                            
REMARK 620 N RES CSSEQI ATOM                                                    
REMARK 620 1 CYS A 494   SG                                                     
REMARK 620 2 CYS A 497   SG  119.6                                              
REMARK 620 3 CYS A 514   SG  116.3 118.8                                        
REMARK 620 4 CYS A 517   SG  101.3  98.2  93.4                                  
REMARK 620 N                    1     2     3                                   
REMARK 620                                                                      
REMARK 620 COORDINATION ANGLES FOR:  M RES CSSEQI METAL                         
REMARK 620                              ZN A1001  ZN                            
REMARK 620 N RES CSSEQI ATOM                                                    
REMARK 620 1 CYS A 537   SG                                                     
REMARK 620 2 CYS A 540   SG  106.1                                              
REMARK 620 3 CYS A 559   SG   96.8 135.2                                        
REMARK 620 4 CYS A 562   SG  118.5 109.7  91.2                                  
REMARK 620 N                    1     2     3                                   
REMARK 620                                                                      
REMARK 620 COORDINATION ANGLES FOR:  M RES CSSEQI METAL                         
REMARK 620                              ZN A1003  ZN                            
REMARK 620 N RES CSSEQI ATOM                                                    
REMARK 620 1 CYS A 549   SG                                                     
REMARK 620 2 CYS A 554   SG  115.7                                              
REMARK 620 3 CYS A 583   SG  111.0 112.6                                        
REMARK 620 4 CYS A 586   SG  107.0  86.4 122.4                                  
REMARK 620 N                    1     2     3                                   
REMARK 800                                                                      
REMARK 800 SITE                                                                 
REMARK 800 SITE_IDENTIFIER: AC1                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 1001                 
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC2                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 1002                 
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC3                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 1003                 
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC4                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: binding site for residue SAH A 1004                
REMARK 900                                                                      
REMARK 900 RELATED ENTRIES                                                      
REMARK 900 RELATED ID: 4U7T   RELATED DB: PDB                                   
DBREF  4U7P A  455   912  UNP    Q9Y6K1   DNM3A_HUMAN    455    912             
DBREF  4U7P B  178   379  UNP    Q9UJW3   DNM3L_HUMAN    178    379             
SEQADV 4U7P GLY A  447  UNP  Q9Y6K1              EXPRESSION TAG                 
SEQADV 4U7P PRO A  448  UNP  Q9Y6K1              EXPRESSION TAG                 
SEQADV 4U7P LEU A  449  UNP  Q9Y6K1              EXPRESSION TAG                 
SEQADV 4U7P GLY A  450  UNP  Q9Y6K1              EXPRESSION TAG                 
SEQADV 4U7P SER A  451  UNP  Q9Y6K1              EXPRESSION TAG                 
SEQADV 4U7P PRO A  452  UNP  Q9Y6K1              EXPRESSION TAG                 
SEQADV 4U7P GLU A  453  UNP  Q9Y6K1              EXPRESSION TAG                 
SEQADV 4U7P PHE A  454  UNP  Q9Y6K1              EXPRESSION TAG                 
SEQADV 4U7P GLY B  171  UNP  Q9UJW3              EXPRESSION TAG                 
SEQADV 4U7P PRO B  172  UNP  Q9UJW3              EXPRESSION TAG                 
SEQADV 4U7P LEU B  173  UNP  Q9UJW3              EXPRESSION TAG                 
SEQADV 4U7P GLY B  174  UNP  Q9UJW3              EXPRESSION TAG                 
SEQADV 4U7P SER B  175  UNP  Q9UJW3              EXPRESSION TAG                 
SEQADV 4U7P GLU B  176  UNP  Q9UJW3              EXPRESSION TAG                 
SEQADV 4U7P PHE B  177  UNP  Q9UJW3              EXPRESSION TAG                 
SEQRES   1 A  466  GLY PRO LEU GLY SER PRO GLU PHE LYS LYS PRO ARG LYS          
SEQRES   2 A  466  SER THR ALA GLU LYS PRO LYS VAL LYS GLU ILE ILE ASP          
SEQRES   3 A  466  GLU ARG THR ARG GLU ARG LEU VAL TYR GLU VAL ARG GLN          
SEQRES   4 A  466  LYS CYS ARG ASN ILE GLU ASP ILE CYS ILE SER CYS GLY          
SEQRES   5 A  466  SER LEU ASN VAL THR LEU GLU HIS PRO LEU PHE VAL GLY          
SEQRES   6 A  466  GLY MET CYS GLN ASN CYS LYS ASN CYS PHE LEU GLU CYS          
SEQRES   7 A  466  ALA TYR GLN TYR ASP ASP ASP GLY TYR GLN SER TYR CYS          
SEQRES   8 A  466  THR ILE CYS CYS GLY GLY ARG GLU VAL LEU MET CYS GLY          
SEQRES   9 A  466  ASN ASN ASN CYS CYS ARG CYS PHE CYS VAL GLU CYS VAL          
SEQRES  10 A  466  ASP LEU LEU VAL GLY PRO GLY ALA ALA GLN ALA ALA ILE          
SEQRES  11 A  466  LYS GLU ASP PRO TRP ASN CYS TYR MET CYS GLY HIS LYS          
SEQRES  12 A  466  GLY THR TYR GLY LEU LEU ARG ARG ARG GLU ASP TRP PRO          
SEQRES  13 A  466  SER ARG LEU GLN MET PHE PHE ALA ASN ASN HIS ASP GLN          
SEQRES  14 A  466  GLU PHE ASP PRO PRO LYS VAL TYR PRO PRO VAL PRO ALA          
SEQRES  15 A  466  GLU LYS ARG LYS PRO ILE ARG VAL LEU SER LEU PHE ASP          
SEQRES  16 A  466  GLY ILE ALA THR GLY LEU LEU VAL LEU LYS ASP LEU GLY          
SEQRES  17 A  466  ILE GLN VAL ASP ARG TYR ILE ALA SER GLU VAL CYS GLU          
SEQRES  18 A  466  ASP SER ILE THR VAL GLY MET VAL ARG HIS GLN GLY LYS          
SEQRES  19 A  466  ILE MET TYR VAL GLY ASP VAL ARG SER VAL THR GLN LYS          
SEQRES  20 A  466  HIS ILE GLN GLU TRP GLY PRO PHE ASP LEU VAL ILE GLY          
SEQRES  21 A  466  GLY SER PRO CYS ASN ASP LEU SER ILE VAL ASN PRO ALA          
SEQRES  22 A  466  ARG LYS GLY LEU TYR GLU GLY THR GLY ARG LEU PHE PHE          
SEQRES  23 A  466  GLU PHE TYR ARG LEU LEU HIS ASP ALA ARG PRO LYS GLU          
SEQRES  24 A  466  GLY ASP ASP ARG PRO PHE PHE TRP LEU PHE GLU ASN VAL          
SEQRES  25 A  466  VAL ALA MET GLY VAL SER ASP LYS ARG ASP ILE SER ARG          
SEQRES  26 A  466  PHE LEU GLU SER ASN PRO VAL MET ILE ASP ALA LYS GLU          
SEQRES  27 A  466  VAL SER ALA ALA HIS ARG ALA ARG TYR PHE TRP GLY ASN          
SEQRES  28 A  466  LEU PRO GLY MET ASN ARG PRO LEU ALA SER THR VAL ASN          
SEQRES  29 A  466  ASP LYS LEU GLU LEU GLN GLU CYS LEU GLU HIS GLY ARG          
SEQRES  30 A  466  ILE ALA LYS PHE SER LYS VAL ARG THR ILE THR THR ARG          
SEQRES  31 A  466  SER ASN SER ILE LYS GLN GLY LYS ASP GLN HIS PHE PRO          
SEQRES  32 A  466  VAL PHE MET ASN GLU LYS GLU ASP ILE LEU TRP CYS THR          
SEQRES  33 A  466  GLU MET GLU ARG VAL PHE GLY PHE PRO VAL HIS TYR THR          
SEQRES  34 A  466  ASP VAL SER ASN MET SER ARG LEU ALA ARG GLN ARG LEU          
SEQRES  35 A  466  LEU GLY ARG SER TRP SER VAL PRO VAL ILE ARG HIS LEU          
SEQRES  36 A  466  PHE ALA PRO LEU LYS GLU TYR PHE ALA CYS VAL                  
SEQRES   1 B  209  GLY PRO LEU GLY SER GLU PHE MET PHE GLU THR VAL PRO          
SEQRES   2 B  209  VAL TRP ARG ARG GLN PRO VAL ARG VAL LEU SER LEU PHE          
SEQRES   3 B  209  GLU ASP ILE LYS LYS GLU LEU THR SER LEU GLY PHE LEU          
SEQRES   4 B  209  GLU SER GLY SER ASP PRO GLY GLN LEU LYS HIS VAL VAL          
SEQRES   5 B  209  ASP VAL THR ASP THR VAL ARG LYS ASP VAL GLU GLU TRP          
SEQRES   6 B  209  GLY PRO PHE ASP LEU VAL TYR GLY ALA THR PRO PRO LEU          
SEQRES   7 B  209  GLY HIS THR CYS ASP ARG PRO PRO SER TRP TYR LEU PHE          
SEQRES   8 B  209  GLN PHE HIS ARG LEU LEU GLN TYR ALA ARG PRO LYS PRO          
SEQRES   9 B  209  GLY SER PRO ARG PRO PHE PHE TRP MET PHE VAL ASP ASN          
SEQRES  10 B  209  LEU VAL LEU ASN LYS GLU ASP LEU ASP VAL ALA SER ARG          
SEQRES  11 B  209  PHE LEU GLU MET GLU PRO VAL THR ILE PRO ASP VAL HIS          
SEQRES  12 B  209  GLY GLY SER LEU GLN ASN ALA VAL ARG VAL TRP SER ASN          
SEQRES  13 B  209  ILE PRO ALA ILE ARG SER ARG HIS TRP ALA LEU VAL SER          
SEQRES  14 B  209  GLU GLU GLU LEU SER LEU LEU ALA GLN ASN LYS GLN SER          
SEQRES  15 B  209  SER LYS LEU ALA ALA LYS TRP PRO THR LYS LEU VAL LYS          
SEQRES  16 B  209  ASN CYS PHE LEU PRO LEU ARG GLU TYR PHE LYS TYR PHE          
SEQRES  17 B  209  SER                                                          
HET     ZN  A1001       1                                                       
HET     ZN  A1002       1                                                       
HET     ZN  A1003       1                                                       
HET    SAH  A1004      26                                                       
HETNAM      ZN ZINC ION                                                         
HETNAM     SAH S-ADENOSYL-L-HOMOCYSTEINE                                        
FORMUL   3   ZN    3(ZN 2+)                                                     
FORMUL   6  SAH    C14 H20 N6 O5 S                                              
HELIX    1 AA1 ARG A  474  GLN A  485  1                                  12    
HELIX    2 AA2 ASN A  489  ILE A  493  5                                   5    
HELIX    3 AA3 CYS A  514  TYR A  528  1                                  15    
HELIX    4 AA4 VAL A  560  VAL A  567  1                                   8    
HELIX    5 AA5 GLY A  570  ILE A  576  1                                   7    
HELIX    6 AA6 ASP A  600  PHE A  609  1                                  10    
HELIX    7 AA7 ALA A  644  GLY A  654  1                                  11    
HELIX    8 AA8 CYS A  666  HIS A  677  1                                  12    
HELIX    9 AA9 THR A  691  TRP A  698  1                                   8    
HELIX   10 AB1 CYS A  710  SER A  714  5                                   5    
HELIX   11 AB2 ARG A  729  ASP A  740  1                                  12    
HELIX   12 AB3 GLY A  762  GLU A  774  1                                  13    
HELIX   13 AB4 LYS A  783  VAL A  785  5                                   3    
HELIX   14 AB5 GLU A  814  CYS A  818  5                                   5    
HELIX   15 AB6 TRP A  860  GLY A  869  1                                  10    
HELIX   16 AB7 SER A  881  ARG A  891  1                                  11    
HELIX   17 AB8 SER A  894  PHE A  902  1                                   9    
HELIX   18 AB9 ALA A  903  LYS A  906  5                                   4    
HELIX   19 AC1 PRO B  183  ARG B  187  5                                   5    
HELIX   20 AC2 ILE B  199  LEU B  206  1                                   8    
HELIX   21 AC3 ASP B  223  THR B  227  5                                   5    
HELIX   22 AC4 VAL B  228  TRP B  235  1                                   8    
HELIX   23 AC5 PRO B  255  ARG B  271  1                                  17    
HELIX   24 AC6 ASN B  291  LEU B  302  1                                  12    
HELIX   25 AC7 SER B  339  LYS B  350  1                                  12    
HELIX   26 AC8 THR B  361  ASN B  366  1                                   6    
HELIX   27 AC9 CYS B  367  TYR B  374  5                                   8    
SHEET    1 AA1 2 LEU A 504  GLU A 505  0                                        
SHEET    2 AA1 2 GLY A 512  MET A 513 -1  O  MET A 513   N  LEU A 504           
SHEET    1 AA2 2 VAL A 546  MET A 548  0                                        
SHEET    2 AA2 2 CYS A 557  CYS A 559 -1  O  PHE A 558   N  LEU A 547           
SHEET    1 AA3 2 THR A 591  TYR A 592  0                                        
SHEET    2 AA3 2 LEU A 595  ARG A 596 -1  O  LEU A 595   N  TYR A 592           
SHEET    1 AA4 7 ILE A 681  VAL A 684  0                                        
SHEET    2 AA4 7 VAL A 657  SER A 663  1  N  TYR A 660   O  MET A 682           
SHEET    3 AA4 7 ILE A 634  LEU A 639  1  N  SER A 638   O  SER A 663           
SHEET    4 AA4 7 LEU A 703  GLY A 707  1  O  LEU A 703   N  LEU A 637           
SHEET    5 AA4 7 PHE A 752  VAL A 758  1  O  PHE A 752   N  VAL A 704           
SHEET    6 AA4 7 ALA A 791  GLY A 796 -1  O  TRP A 795   N  PHE A 755           
SHEET    7 AA4 7 VAL A 778  ASP A 781 -1  N  ILE A 780   O  ARG A 792           
SHEET    1 AA5 3 ILE A 824  ALA A 825  0                                        
SHEET    2 AA5 3 VAL A 850  PHE A 851 -1  O  PHE A 851   N  ILE A 824           
SHEET    3 AA5 3 GLU A 856  ASP A 857 -1  O  ASP A 857   N  VAL A 850           
SHEET    1 AA6 6 LEU B 218  VAL B 221  0                                        
SHEET    2 AA6 6 VAL B 192  LEU B 195  1  N  VAL B 192   O  LYS B 219           
SHEET    3 AA6 6 LEU B 240  ALA B 244  1  O  TYR B 242   N  LEU B 195           
SHEET    4 AA6 6 PHE B 281  ASP B 286  1  O  MET B 283   N  VAL B 241           
SHEET    5 AA6 6 LEU B 317  SER B 325 -1  O  TRP B 324   N  PHE B 284           
SHEET    6 AA6 6 VAL B 307  VAL B 312 -1  N  VAL B 307   O  VAL B 323           
LINK         SG  CYS A 494                ZN    ZN A1002     1555   1555  2.37  
LINK         SG  CYS A 497                ZN    ZN A1002     1555   1555  2.35  
LINK         SG  CYS A 514                ZN    ZN A1002     1555   1555  2.26  
LINK         SG  CYS A 517                ZN    ZN A1002     1555   1555  2.17  
LINK         SG  CYS A 537                ZN    ZN A1001     1555   1555  2.39  
LINK         SG  CYS A 540                ZN    ZN A1001     1555   1555  2.22  
LINK         SG  CYS A 549                ZN    ZN A1003     1555   1555  2.44  
LINK         SG  CYS A 554                ZN    ZN A1003     1555   1555  2.36  
LINK         SG  CYS A 559                ZN    ZN A1001     1555   1555  2.32  
LINK         SG  CYS A 562                ZN    ZN A1001     1555   1555  2.38  
LINK         SG  CYS A 583                ZN    ZN A1003     1555   1555  2.27  
LINK         SG  CYS A 586                ZN    ZN A1003     1555   1555  2.28  
CISPEP   1 TYR A  536    CYS A  537          0        -3.92                     
CISPEP   2 GLU A  629    LYS A  630          0        -0.50                     
CISPEP   3 SER B  213    ASP B  214          0        11.08                     
CISPEP   4 PRO B  215    GLY B  216          0        -7.18                     
SITE     1 AC1  4 CYS A 537  CYS A 540  CYS A 559  CYS A 562                    
SITE     1 AC2  4 CYS A 494  CYS A 497  CYS A 514  CYS A 517                    
SITE     1 AC3  4 CYS A 549  CYS A 554  CYS A 583  CYS A 586                    
SITE     1 AC4 15 PHE A 640  ASP A 641  ILE A 643  THR A 645                    
SITE     2 AC4 15 GLU A 664  VAL A 665  CYS A 666  ASP A 686                    
SITE     3 AC4 15 VAL A 687  GLY A 707  PRO A 709  LEU A 730                    
SITE     4 AC4 15 ARG A 891  SER A 892  TRP A 893                               
CRYST1  252.031  252.031   75.336  90.00  90.00 120.00 P 63 2 2     12          
ORIGX1      1.000000  0.000000  0.000000        0.00000                         
ORIGX2      0.000000  1.000000  0.000000        0.00000                         
ORIGX3      0.000000  0.000000  1.000000        0.00000                         
SCALE1      0.003968  0.002291  0.000000        0.00000                         
SCALE2      0.000000  0.004582  0.000000        0.00000                         
SCALE3      0.000000  0.000000  0.013274        0.00000