HEADER TRANSFERASE/TRANSFERASE REGULATOR 31-JUL-14 4U7T TITLE CRYSTAL STRUCTURE OF DNMT3A-DNMT3L IN COMPLEX WITH HISTONE H3 COMPND MOL_ID: 1; COMPND 2 MOLECULE: DNA (CYTOSINE-5)-METHYLTRANSFERASE 3A; COMPND 3 CHAIN: A, C; COMPND 4 FRAGMENT: UNP RESIDUES 476-912; COMPND 5 SYNONYM: DNA METHYLTRANSFERASES DNMT3A; COMPND 6 EC: 2.1.1.37; COMPND 7 ENGINEERED: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: DNA (CYTOSINE-5)-METHYLTRANSFERASE 3-LIKE; COMPND 10 CHAIN: B, D; COMPND 11 FRAGMENT: UNP RESIDUES 178-379; COMPND 12 SYNONYM: DNA METHYLTRANSFERASES DNMT3L; COMPND 13 ENGINEERED: YES; COMPND 14 MOL_ID: 3; COMPND 15 MOLECULE: PEPTIDE FROM HISTONE H3.3; COMPND 16 CHAIN: F, G; COMPND 17 SYNONYM: HISTONE H3 PEPTIDE; COMPND 18 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: DNMT3A; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 10 ORGANISM_COMMON: HUMAN; SOURCE 11 ORGANISM_TAXID: 9606; SOURCE 12 GENE: DNMT3L; SOURCE 13 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 15 MOL_ID: 3; SOURCE 16 SYNTHETIC: YES; SOURCE 17 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 18 ORGANISM_COMMON: HUMAN; SOURCE 19 ORGANISM_TAXID: 9606 KEYWDS DNA METHYLTRANSFERASE, ACTIVE FORM, TRANSFERASE-TRANSFERASE REGULATOR KEYWDS 2 COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR X.GUO,L.WANG,X.YIN,J.LI,J.XIAO,S.HE,J.WANG,Y.XU REVDAT 4 08-NOV-23 4U7T 1 SOURCE REMARK REVDAT 3 04-FEB-15 4U7T 1 JRNL REVDAT 2 17-DEC-14 4U7T 1 JRNL REVDAT 1 12-NOV-14 4U7T 0 JRNL AUTH X.GUO,L.WANG,J.LI,Z.DING,J.XIAO,X.YIN,S.HE,P.SHI,L.DONG, JRNL AUTH 2 G.LI,C.TIAN,J.WANG,Y.CONG,Y.XU JRNL TITL STRUCTURAL INSIGHT INTO AUTOINHIBITION AND HISTONE JRNL TITL 2 H3-INDUCED ACTIVATION OF DNMT3A JRNL REF NATURE V. 517 640 2015 JRNL REFN ISSN 0028-0836 JRNL PMID 25383530 JRNL DOI 10.1038/NATURE13899 REMARK 2 REMARK 2 RESOLUTION. 2.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.9_1692) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 40.21 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 52407 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.225 REMARK 3 R VALUE (WORKING SET) : 0.223 REMARK 3 FREE R VALUE : 0.261 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.090 REMARK 3 FREE R VALUE TEST SET COUNT : 2667 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 40.2173 - 7.7187 0.98 2627 157 0.1951 0.2180 REMARK 3 2 7.7187 - 6.1336 1.00 2628 152 0.2109 0.2598 REMARK 3 3 6.1336 - 5.3603 1.00 2639 150 0.2078 0.2642 REMARK 3 4 5.3603 - 4.8711 1.00 2652 123 0.1851 0.1829 REMARK 3 5 4.8711 - 4.5225 1.00 2639 131 0.1720 0.2228 REMARK 3 6 4.5225 - 4.2562 1.00 2614 143 0.1784 0.2071 REMARK 3 7 4.2562 - 4.0432 1.00 2627 155 0.2034 0.2106 REMARK 3 8 4.0432 - 3.8674 1.00 2614 131 0.2134 0.2743 REMARK 3 9 3.8674 - 3.7186 1.00 2621 149 0.2439 0.3084 REMARK 3 10 3.7186 - 3.5904 1.00 2589 156 0.2418 0.2763 REMARK 3 11 3.5904 - 3.4782 1.00 2638 144 0.2639 0.3127 REMARK 3 12 3.4782 - 3.3788 1.00 2611 131 0.2637 0.3272 REMARK 3 13 3.3788 - 3.2899 1.00 2610 137 0.3025 0.3229 REMARK 3 14 3.2899 - 3.2096 1.00 2626 130 0.2828 0.3297 REMARK 3 15 3.2096 - 3.1367 1.00 2637 127 0.2910 0.4118 REMARK 3 16 3.1367 - 3.0700 1.00 2577 137 0.3017 0.3574 REMARK 3 17 3.0700 - 3.0086 1.00 2654 119 0.3298 0.3904 REMARK 3 18 3.0086 - 2.9518 1.00 2589 156 0.3207 0.3977 REMARK 3 19 2.9518 - 2.8991 0.97 2548 139 0.3695 0.4063 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.460 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 30.490 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 77.28 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 83.46 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.010 10286 REMARK 3 ANGLE : 1.408 13910 REMARK 3 CHIRALITY : 0.056 1480 REMARK 3 PLANARITY : 0.006 1792 REMARK 3 DIHEDRAL : 17.287 3846 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : 3 REMARK 3 NCS GROUP : 1 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: CHAIN A REMARK 3 SELECTION : CHAIN C REMARK 3 ATOM PAIRS NUMBER : 3913 REMARK 3 RMSD : NULL REMARK 3 NCS GROUP : 2 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: CHAIN B REMARK 3 SELECTION : CHAIN D REMARK 3 ATOM PAIRS NUMBER : 1674 REMARK 3 RMSD : NULL REMARK 3 NCS GROUP : 3 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: CHAIN F REMARK 3 SELECTION : CHAIN G REMARK 3 ATOM PAIRS NUMBER : 80 REMARK 3 RMSD : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4U7T COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 07-AUG-14. REMARK 100 THE DEPOSITION ID IS D_1000202955. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 07-NOV-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.3-5.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL17U REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9792 REMARK 200 MONOCHROMATOR : SAGITALLY FOCUSED SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 52477 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.900 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 9.900 REMARK 200 R MERGE (I) : 0.09500 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 139.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 3A1A, 2QRV REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 69.37 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.02 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M SODIUM ACETATE, 0.6M AMMONIUM REMARK 280 SULFATE, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 65 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/6 REMARK 290 6555 X-Y,X,Z+5/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 82.17667 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 41.08833 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 61.63250 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 20.54417 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 102.72083 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: BIOLOGICAL UNIT IS THE SAME AS ASYM. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D, F, G REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 468 REMARK 465 PRO A 469 REMARK 465 LEU A 470 REMARK 465 GLY A 471 REMARK 465 SER A 472 REMARK 465 PRO A 473 REMARK 465 ASN A 611 REMARK 465 ASN A 612 REMARK 465 HIS A 613 REMARK 465 ASP A 614 REMARK 465 GLN A 615 REMARK 465 GLU A 616 REMARK 465 PHE A 617 REMARK 465 ASP A 618 REMARK 465 PRO A 619 REMARK 465 PRO A 620 REMARK 465 THR A 834 REMARK 465 THR A 835 REMARK 465 ARG A 836 REMARK 465 SER A 837 REMARK 465 ASN A 838 REMARK 465 SER A 839 REMARK 465 ILE A 840 REMARK 465 LYS A 841 REMARK 465 GLN A 842 REMARK 465 GLY A 843 REMARK 465 LYS A 844 REMARK 465 ASP A 845 REMARK 465 GLY B 171 REMARK 465 PRO B 172 REMARK 465 LEU B 173 REMARK 465 GLY B 174 REMARK 465 SER B 175 REMARK 465 GLU B 176 REMARK 465 SER B 316 REMARK 465 LEU B 317 REMARK 465 GLN B 318 REMARK 465 ASN B 319 REMARK 465 ALA B 320 REMARK 465 ARG B 333 REMARK 465 HIS B 334 REMARK 465 TRP B 335 REMARK 465 GLN B 351 REMARK 465 LYS B 354 REMARK 465 LEU B 355 REMARK 465 ALA B 356 REMARK 465 ALA B 357 REMARK 465 LYS B 358 REMARK 465 TRP B 359 REMARK 465 PRO B 360 REMARK 465 GLY C 468 REMARK 465 PRO C 469 REMARK 465 LEU C 470 REMARK 465 GLY C 471 REMARK 465 SER C 472 REMARK 465 PRO C 473 REMARK 465 ASN C 611 REMARK 465 ASN C 612 REMARK 465 HIS C 613 REMARK 465 ASP C 614 REMARK 465 GLN C 615 REMARK 465 GLU C 616 REMARK 465 PHE C 617 REMARK 465 ASP C 618 REMARK 465 PRO C 619 REMARK 465 THR C 834 REMARK 465 THR C 835 REMARK 465 ARG C 836 REMARK 465 SER C 837 REMARK 465 ASN C 838 REMARK 465 SER C 839 REMARK 465 ILE C 840 REMARK 465 LYS C 841 REMARK 465 GLN C 842 REMARK 465 GLY C 843 REMARK 465 LYS C 844 REMARK 465 ASP C 845 REMARK 465 GLY D 171 REMARK 465 PRO D 172 REMARK 465 LEU D 173 REMARK 465 GLY D 174 REMARK 465 SER D 175 REMARK 465 GLU D 176 REMARK 465 GLY D 314 REMARK 465 GLY D 315 REMARK 465 SER D 316 REMARK 465 LEU D 317 REMARK 465 GLN D 318 REMARK 465 ASN D 319 REMARK 465 LYS D 354 REMARK 465 LEU D 355 REMARK 465 ALA D 356 REMARK 465 ALA D 357 REMARK 465 LYS D 358 REMARK 465 TRP D 359 REMARK 465 THR F 11 REMARK 465 GLY F 12 REMARK 465 THR G 11 REMARK 465 GLY G 12 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O THR D 245 ND2 ASN D 287 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 NZ LYS B 230 OE1 GLU D 180 2664 2.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO A 849 C - N - CA ANGL. DEV. = 9.3 DEGREES REMARK 500 PRO C 904 C - N - CA ANGL. DEV. = -9.0 DEGREES REMARK 500 PRO D 310 C - N - CA ANGL. DEV. = 9.4 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 501 49.62 -73.25 REMARK 500 THR A 503 -54.32 -122.64 REMARK 500 TYR A 526 35.21 -91.95 REMARK 500 ILE A 539 -71.77 -79.40 REMARK 500 ASN A 553 -9.43 71.62 REMARK 500 LEU A 565 -67.00 -125.39 REMARK 500 TYR A 592 55.72 -145.77 REMARK 500 ASP A 686 135.79 -38.89 REMARK 500 ALA A 760 42.95 -71.68 REMARK 500 VAL A 785 -4.31 -143.58 REMARK 500 GLU A 814 117.34 79.12 REMARK 500 GLU A 854 -14.76 62.29 REMARK 500 HIS A 873 9.83 85.52 REMARK 500 VAL A 877 -51.49 -135.69 REMARK 500 SER A 878 -144.99 -111.18 REMARK 500 PHE B 196 -59.48 -122.54 REMARK 500 PHE B 196 -58.11 -122.54 REMARK 500 GLU B 202 -15.27 -158.75 REMARK 500 VAL B 222 -58.76 -136.40 REMARK 500 THR B 225 -46.34 -22.72 REMARK 500 TRP B 235 29.84 -72.91 REMARK 500 HIS B 250 -70.02 -63.98 REMARK 500 THR B 251 68.42 -103.76 REMARK 500 CYS B 252 70.43 -118.82 REMARK 500 HIS B 313 -58.78 -158.42 REMARK 500 ASN C 501 48.96 -72.76 REMARK 500 THR C 503 -53.37 -122.43 REMARK 500 TYR C 526 34.35 -92.03 REMARK 500 ILE C 539 -70.72 -79.33 REMARK 500 ASN C 553 -9.67 72.02 REMARK 500 LEU C 565 -66.81 -124.42 REMARK 500 TYR C 592 52.74 -149.02 REMARK 500 GLN C 678 42.32 70.51 REMARK 500 ARG C 720 137.70 -35.73 REMARK 500 ALA C 760 44.41 -73.61 REMARK 500 VAL C 785 -4.18 -143.96 REMARK 500 GLU C 814 117.74 78.34 REMARK 500 GLU C 854 -11.91 62.68 REMARK 500 HIS C 873 9.26 87.17 REMARK 500 VAL C 877 -50.93 -135.17 REMARK 500 SER C 878 -145.13 -111.67 REMARK 500 PHE D 196 -56.37 -123.31 REMARK 500 LYS D 201 -80.60 -46.87 REMARK 500 VAL D 222 -58.98 -135.21 REMARK 500 THR D 225 -44.44 -25.60 REMARK 500 TRP D 235 28.40 -72.66 REMARK 500 HIS D 250 -71.98 -61.85 REMARK 500 THR D 251 69.70 -106.37 REMARK 500 CYS D 252 68.17 -116.86 REMARK 500 ASP D 311 -126.37 -91.60 REMARK 500 REMARK 500 THIS ENTRY HAS 54 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 LYS B 201 GLU B 202 148.00 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A1001 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 494 SG REMARK 620 2 CYS A 497 SG 121.4 REMARK 620 3 CYS A 514 SG 119.4 101.4 REMARK 620 4 CYS A 517 SG 118.2 97.8 93.1 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A1002 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 537 SG REMARK 620 2 CYS A 540 SG 96.7 REMARK 620 3 CYS A 559 SG 115.8 113.9 REMARK 620 4 CYS A 562 SG 101.6 115.3 112.1 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A1003 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 549 SG REMARK 620 2 CYS A 554 SG 95.8 REMARK 620 3 CYS A 583 SG 99.4 125.2 REMARK 620 4 CYS A 586 SG 123.8 107.5 106.6 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN C1001 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS C 494 SG REMARK 620 2 CYS C 497 SG 124.3 REMARK 620 3 CYS C 514 SG 115.3 98.8 REMARK 620 4 CYS C 517 SG 119.4 97.0 96.8 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN C1002 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS C 537 SG REMARK 620 2 CYS C 540 SG 95.3 REMARK 620 3 CYS C 559 SG 112.1 102.8 REMARK 620 4 CYS C 562 SG 110.2 121.6 113.5 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN C1003 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS C 549 SG REMARK 620 2 CYS C 554 SG 93.0 REMARK 620 3 CYS C 583 SG 96.5 123.8 REMARK 620 4 CYS C 586 SG 127.4 109.4 107.8 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 1001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 1002 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 1003 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SAH A 1004 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN C 1001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN C 1002 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN C 1003 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SAH C 1004 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4U7P RELATED DB: PDB DBREF 4U7T A 476 912 UNP Q9Y6K1 DNM3A_HUMAN 476 912 DBREF 4U7T B 178 379 UNP Q9UJW3 DNM3L_HUMAN 178 379 DBREF 4U7T C 476 912 UNP Q9Y6K1 DNM3A_HUMAN 476 912 DBREF 4U7T D 178 379 UNP Q9UJW3 DNM3L_HUMAN 178 379 DBREF 4U7T F 1 12 UNP P84243 H33_HUMAN 2 13 DBREF 4U7T G 1 12 UNP P84243 H33_HUMAN 2 13 SEQADV 4U7T GLY A 468 UNP Q9Y6K1 EXPRESSION TAG SEQADV 4U7T PRO A 469 UNP Q9Y6K1 EXPRESSION TAG SEQADV 4U7T LEU A 470 UNP Q9Y6K1 EXPRESSION TAG SEQADV 4U7T GLY A 471 UNP Q9Y6K1 EXPRESSION TAG SEQADV 4U7T SER A 472 UNP Q9Y6K1 EXPRESSION TAG SEQADV 4U7T PRO A 473 UNP Q9Y6K1 EXPRESSION TAG SEQADV 4U7T GLU A 474 UNP Q9Y6K1 EXPRESSION TAG SEQADV 4U7T PHE A 475 UNP Q9Y6K1 EXPRESSION TAG SEQADV 4U7T GLY B 171 UNP Q9UJW3 EXPRESSION TAG SEQADV 4U7T PRO B 172 UNP Q9UJW3 EXPRESSION TAG SEQADV 4U7T LEU B 173 UNP Q9UJW3 EXPRESSION TAG SEQADV 4U7T GLY B 174 UNP Q9UJW3 EXPRESSION TAG SEQADV 4U7T SER B 175 UNP Q9UJW3 EXPRESSION TAG SEQADV 4U7T GLU B 176 UNP Q9UJW3 EXPRESSION TAG SEQADV 4U7T PHE B 177 UNP Q9UJW3 EXPRESSION TAG SEQADV 4U7T GLY C 468 UNP Q9Y6K1 EXPRESSION TAG SEQADV 4U7T PRO C 469 UNP Q9Y6K1 EXPRESSION TAG SEQADV 4U7T LEU C 470 UNP Q9Y6K1 EXPRESSION TAG SEQADV 4U7T GLY C 471 UNP Q9Y6K1 EXPRESSION TAG SEQADV 4U7T SER C 472 UNP Q9Y6K1 EXPRESSION TAG SEQADV 4U7T PRO C 473 UNP Q9Y6K1 EXPRESSION TAG SEQADV 4U7T GLU C 474 UNP Q9Y6K1 EXPRESSION TAG SEQADV 4U7T PHE C 475 UNP Q9Y6K1 EXPRESSION TAG SEQADV 4U7T GLY D 171 UNP Q9UJW3 EXPRESSION TAG SEQADV 4U7T PRO D 172 UNP Q9UJW3 EXPRESSION TAG SEQADV 4U7T LEU D 173 UNP Q9UJW3 EXPRESSION TAG SEQADV 4U7T GLY D 174 UNP Q9UJW3 EXPRESSION TAG SEQADV 4U7T SER D 175 UNP Q9UJW3 EXPRESSION TAG SEQADV 4U7T GLU D 176 UNP Q9UJW3 EXPRESSION TAG SEQADV 4U7T PHE D 177 UNP Q9UJW3 EXPRESSION TAG SEQRES 1 A 445 GLY PRO LEU GLY SER PRO GLU PHE ARG GLU ARG LEU VAL SEQRES 2 A 445 TYR GLU VAL ARG GLN LYS CYS ARG ASN ILE GLU ASP ILE SEQRES 3 A 445 CYS ILE SER CYS GLY SER LEU ASN VAL THR LEU GLU HIS SEQRES 4 A 445 PRO LEU PHE VAL GLY GLY MET CYS GLN ASN CYS LYS ASN SEQRES 5 A 445 CYS PHE LEU GLU CYS ALA TYR GLN TYR ASP ASP ASP GLY SEQRES 6 A 445 TYR GLN SER TYR CYS THR ILE CYS CYS GLY GLY ARG GLU SEQRES 7 A 445 VAL LEU MET CYS GLY ASN ASN ASN CYS CYS ARG CYS PHE SEQRES 8 A 445 CYS VAL GLU CYS VAL ASP LEU LEU VAL GLY PRO GLY ALA SEQRES 9 A 445 ALA GLN ALA ALA ILE LYS GLU ASP PRO TRP ASN CYS TYR SEQRES 10 A 445 MET CYS GLY HIS LYS GLY THR TYR GLY LEU LEU ARG ARG SEQRES 11 A 445 ARG GLU ASP TRP PRO SER ARG LEU GLN MET PHE PHE ALA SEQRES 12 A 445 ASN ASN HIS ASP GLN GLU PHE ASP PRO PRO LYS VAL TYR SEQRES 13 A 445 PRO PRO VAL PRO ALA GLU LYS ARG LYS PRO ILE ARG VAL SEQRES 14 A 445 LEU SER LEU PHE ASP GLY ILE ALA THR GLY LEU LEU VAL SEQRES 15 A 445 LEU LYS ASP LEU GLY ILE GLN VAL ASP ARG TYR ILE ALA SEQRES 16 A 445 SER GLU VAL CYS GLU ASP SER ILE THR VAL GLY MET VAL SEQRES 17 A 445 ARG HIS GLN GLY LYS ILE MET TYR VAL GLY ASP VAL ARG SEQRES 18 A 445 SER VAL THR GLN LYS HIS ILE GLN GLU TRP GLY PRO PHE SEQRES 19 A 445 ASP LEU VAL ILE GLY GLY SER PRO CYS ASN ASP LEU SER SEQRES 20 A 445 ILE VAL ASN PRO ALA ARG LYS GLY LEU TYR GLU GLY THR SEQRES 21 A 445 GLY ARG LEU PHE PHE GLU PHE TYR ARG LEU LEU HIS ASP SEQRES 22 A 445 ALA ARG PRO LYS GLU GLY ASP ASP ARG PRO PHE PHE TRP SEQRES 23 A 445 LEU PHE GLU ASN VAL VAL ALA MET GLY VAL SER ASP LYS SEQRES 24 A 445 ARG ASP ILE SER ARG PHE LEU GLU SER ASN PRO VAL MET SEQRES 25 A 445 ILE ASP ALA LYS GLU VAL SER ALA ALA HIS ARG ALA ARG SEQRES 26 A 445 TYR PHE TRP GLY ASN LEU PRO GLY MET ASN ARG PRO LEU SEQRES 27 A 445 ALA SER THR VAL ASN ASP LYS LEU GLU LEU GLN GLU CYS SEQRES 28 A 445 LEU GLU HIS GLY ARG ILE ALA LYS PHE SER LYS VAL ARG SEQRES 29 A 445 THR ILE THR THR ARG SER ASN SER ILE LYS GLN GLY LYS SEQRES 30 A 445 ASP GLN HIS PHE PRO VAL PHE MET ASN GLU LYS GLU ASP SEQRES 31 A 445 ILE LEU TRP CYS THR GLU MET GLU ARG VAL PHE GLY PHE SEQRES 32 A 445 PRO VAL HIS TYR THR ASP VAL SER ASN MET SER ARG LEU SEQRES 33 A 445 ALA ARG GLN ARG LEU LEU GLY ARG SER TRP SER VAL PRO SEQRES 34 A 445 VAL ILE ARG HIS LEU PHE ALA PRO LEU LYS GLU TYR PHE SEQRES 35 A 445 ALA CYS VAL SEQRES 1 B 209 GLY PRO LEU GLY SER GLU PHE MET PHE GLU THR VAL PRO SEQRES 2 B 209 VAL TRP ARG ARG GLN PRO VAL ARG VAL LEU SER LEU PHE SEQRES 3 B 209 GLU ASP ILE LYS LYS GLU LEU THR SER LEU GLY PHE LEU SEQRES 4 B 209 GLU SER GLY SER ASP PRO GLY GLN LEU LYS HIS VAL VAL SEQRES 5 B 209 ASP VAL THR ASP THR VAL ARG LYS ASP VAL GLU GLU TRP SEQRES 6 B 209 GLY PRO PHE ASP LEU VAL TYR GLY ALA THR PRO PRO LEU SEQRES 7 B 209 GLY HIS THR CYS ASP ARG PRO PRO SER TRP TYR LEU PHE SEQRES 8 B 209 GLN PHE HIS ARG LEU LEU GLN TYR ALA ARG PRO LYS PRO SEQRES 9 B 209 GLY SER PRO ARG PRO PHE PHE TRP MET PHE VAL ASP ASN SEQRES 10 B 209 LEU VAL LEU ASN LYS GLU ASP LEU ASP VAL ALA SER ARG SEQRES 11 B 209 PHE LEU GLU MET GLU PRO VAL THR ILE PRO ASP VAL HIS SEQRES 12 B 209 GLY GLY SER LEU GLN ASN ALA VAL ARG VAL TRP SER ASN SEQRES 13 B 209 ILE PRO ALA ILE ARG SER ARG HIS TRP ALA LEU VAL SER SEQRES 14 B 209 GLU GLU GLU LEU SER LEU LEU ALA GLN ASN LYS GLN SER SEQRES 15 B 209 SER LYS LEU ALA ALA LYS TRP PRO THR LYS LEU VAL LYS SEQRES 16 B 209 ASN CYS PHE LEU PRO LEU ARG GLU TYR PHE LYS TYR PHE SEQRES 17 B 209 SER SEQRES 1 C 445 GLY PRO LEU GLY SER PRO GLU PHE ARG GLU ARG LEU VAL SEQRES 2 C 445 TYR GLU VAL ARG GLN LYS CYS ARG ASN ILE GLU ASP ILE SEQRES 3 C 445 CYS ILE SER CYS GLY SER LEU ASN VAL THR LEU GLU HIS SEQRES 4 C 445 PRO LEU PHE VAL GLY GLY MET CYS GLN ASN CYS LYS ASN SEQRES 5 C 445 CYS PHE LEU GLU CYS ALA TYR GLN TYR ASP ASP ASP GLY SEQRES 6 C 445 TYR GLN SER TYR CYS THR ILE CYS CYS GLY GLY ARG GLU SEQRES 7 C 445 VAL LEU MET CYS GLY ASN ASN ASN CYS CYS ARG CYS PHE SEQRES 8 C 445 CYS VAL GLU CYS VAL ASP LEU LEU VAL GLY PRO GLY ALA SEQRES 9 C 445 ALA GLN ALA ALA ILE LYS GLU ASP PRO TRP ASN CYS TYR SEQRES 10 C 445 MET CYS GLY HIS LYS GLY THR TYR GLY LEU LEU ARG ARG SEQRES 11 C 445 ARG GLU ASP TRP PRO SER ARG LEU GLN MET PHE PHE ALA SEQRES 12 C 445 ASN ASN HIS ASP GLN GLU PHE ASP PRO PRO LYS VAL TYR SEQRES 13 C 445 PRO PRO VAL PRO ALA GLU LYS ARG LYS PRO ILE ARG VAL SEQRES 14 C 445 LEU SER LEU PHE ASP GLY ILE ALA THR GLY LEU LEU VAL SEQRES 15 C 445 LEU LYS ASP LEU GLY ILE GLN VAL ASP ARG TYR ILE ALA SEQRES 16 C 445 SER GLU VAL CYS GLU ASP SER ILE THR VAL GLY MET VAL SEQRES 17 C 445 ARG HIS GLN GLY LYS ILE MET TYR VAL GLY ASP VAL ARG SEQRES 18 C 445 SER VAL THR GLN LYS HIS ILE GLN GLU TRP GLY PRO PHE SEQRES 19 C 445 ASP LEU VAL ILE GLY GLY SER PRO CYS ASN ASP LEU SER SEQRES 20 C 445 ILE VAL ASN PRO ALA ARG LYS GLY LEU TYR GLU GLY THR SEQRES 21 C 445 GLY ARG LEU PHE PHE GLU PHE TYR ARG LEU LEU HIS ASP SEQRES 22 C 445 ALA ARG PRO LYS GLU GLY ASP ASP ARG PRO PHE PHE TRP SEQRES 23 C 445 LEU PHE GLU ASN VAL VAL ALA MET GLY VAL SER ASP LYS SEQRES 24 C 445 ARG ASP ILE SER ARG PHE LEU GLU SER ASN PRO VAL MET SEQRES 25 C 445 ILE ASP ALA LYS GLU VAL SER ALA ALA HIS ARG ALA ARG SEQRES 26 C 445 TYR PHE TRP GLY ASN LEU PRO GLY MET ASN ARG PRO LEU SEQRES 27 C 445 ALA SER THR VAL ASN ASP LYS LEU GLU LEU GLN GLU CYS SEQRES 28 C 445 LEU GLU HIS GLY ARG ILE ALA LYS PHE SER LYS VAL ARG SEQRES 29 C 445 THR ILE THR THR ARG SER ASN SER ILE LYS GLN GLY LYS SEQRES 30 C 445 ASP GLN HIS PHE PRO VAL PHE MET ASN GLU LYS GLU ASP SEQRES 31 C 445 ILE LEU TRP CYS THR GLU MET GLU ARG VAL PHE GLY PHE SEQRES 32 C 445 PRO VAL HIS TYR THR ASP VAL SER ASN MET SER ARG LEU SEQRES 33 C 445 ALA ARG GLN ARG LEU LEU GLY ARG SER TRP SER VAL PRO SEQRES 34 C 445 VAL ILE ARG HIS LEU PHE ALA PRO LEU LYS GLU TYR PHE SEQRES 35 C 445 ALA CYS VAL SEQRES 1 D 209 GLY PRO LEU GLY SER GLU PHE MET PHE GLU THR VAL PRO SEQRES 2 D 209 VAL TRP ARG ARG GLN PRO VAL ARG VAL LEU SER LEU PHE SEQRES 3 D 209 GLU ASP ILE LYS LYS GLU LEU THR SER LEU GLY PHE LEU SEQRES 4 D 209 GLU SER GLY SER ASP PRO GLY GLN LEU LYS HIS VAL VAL SEQRES 5 D 209 ASP VAL THR ASP THR VAL ARG LYS ASP VAL GLU GLU TRP SEQRES 6 D 209 GLY PRO PHE ASP LEU VAL TYR GLY ALA THR PRO PRO LEU SEQRES 7 D 209 GLY HIS THR CYS ASP ARG PRO PRO SER TRP TYR LEU PHE SEQRES 8 D 209 GLN PHE HIS ARG LEU LEU GLN TYR ALA ARG PRO LYS PRO SEQRES 9 D 209 GLY SER PRO ARG PRO PHE PHE TRP MET PHE VAL ASP ASN SEQRES 10 D 209 LEU VAL LEU ASN LYS GLU ASP LEU ASP VAL ALA SER ARG SEQRES 11 D 209 PHE LEU GLU MET GLU PRO VAL THR ILE PRO ASP VAL HIS SEQRES 12 D 209 GLY GLY SER LEU GLN ASN ALA VAL ARG VAL TRP SER ASN SEQRES 13 D 209 ILE PRO ALA ILE ARG SER ARG HIS TRP ALA LEU VAL SER SEQRES 14 D 209 GLU GLU GLU LEU SER LEU LEU ALA GLN ASN LYS GLN SER SEQRES 15 D 209 SER LYS LEU ALA ALA LYS TRP PRO THR LYS LEU VAL LYS SEQRES 16 D 209 ASN CYS PHE LEU PRO LEU ARG GLU TYR PHE LYS TYR PHE SEQRES 17 D 209 SER SEQRES 1 F 12 ALA ARG THR LYS GLN THR ALA ARG LYS SER THR GLY SEQRES 1 G 12 ALA ARG THR LYS GLN THR ALA ARG LYS SER THR GLY HET ZN A1001 1 HET ZN A1002 1 HET ZN A1003 1 HET SAH A1004 26 HET ZN C1001 1 HET ZN C1002 1 HET ZN C1003 1 HET SAH C1004 26 HETNAM ZN ZINC ION HETNAM SAH S-ADENOSYL-L-HOMOCYSTEINE FORMUL 7 ZN 6(ZN 2+) FORMUL 10 SAH 2(C14 H20 N6 O5 S) FORMUL 15 HOH *11(H2 O) HELIX 1 AA1 ARG A 476 GLN A 485 1 10 HELIX 2 AA2 ASN A 489 ILE A 493 5 5 HELIX 3 AA3 CYS A 514 ALA A 525 1 12 HELIX 4 AA4 VAL A 560 VAL A 567 1 8 HELIX 5 AA5 GLY A 570 GLU A 578 1 9 HELIX 6 AA6 ASP A 600 PHE A 609 1 10 HELIX 7 AA7 PRO A 627 ARG A 631 5 5 HELIX 8 AA8 ALA A 644 GLY A 654 1 11 HELIX 9 AA9 CYS A 666 GLN A 678 1 13 HELIX 10 AB1 ASP A 686 VAL A 690 5 5 HELIX 11 AB2 THR A 691 TRP A 698 1 8 HELIX 12 AB3 ARG A 729 ARG A 742 1 14 HELIX 13 AB4 GLY A 762 LEU A 773 1 12 HELIX 14 AB5 LYS A 783 VAL A 785 5 3 HELIX 15 AB6 GLU A 814 LEU A 819 5 6 HELIX 16 AB7 TRP A 860 PHE A 868 1 9 HELIX 17 AB8 SER A 881 SER A 892 1 12 HELIX 18 AB9 SER A 894 ALA A 903 1 10 HELIX 19 AC1 PRO A 904 TYR A 908 5 5 HELIX 20 AC2 PRO B 183 ARG B 187 5 5 HELIX 21 AC3 ILE B 199 THR B 204 1 6 HELIX 22 AC4 ASP B 223 THR B 227 5 5 HELIX 23 AC5 VAL B 228 TRP B 235 1 8 HELIX 24 AC6 PRO B 255 ARG B 271 1 17 HELIX 25 AC7 ASN B 291 LEU B 302 1 12 HELIX 26 AC8 SER B 339 LYS B 350 1 12 HELIX 27 AC9 VAL B 364 TYR B 374 5 11 HELIX 28 AD1 ARG C 476 GLN C 485 1 10 HELIX 29 AD2 ASN C 489 ILE C 493 5 5 HELIX 30 AD3 CYS C 514 ALA C 525 1 12 HELIX 31 AD4 VAL C 560 VAL C 567 1 8 HELIX 32 AD5 GLY C 570 GLU C 578 1 9 HELIX 33 AD6 ASP C 600 PHE C 609 1 10 HELIX 34 AD7 ALA C 644 LEU C 653 1 10 HELIX 35 AD8 CYS C 666 GLN C 678 1 13 HELIX 36 AD9 ASP C 686 VAL C 690 5 5 HELIX 37 AE1 THR C 691 TRP C 698 1 8 HELIX 38 AE2 ARG C 729 ARG C 742 1 14 HELIX 39 AE3 GLY C 762 LEU C 773 1 12 HELIX 40 AE4 LYS C 783 VAL C 785 5 3 HELIX 41 AE5 GLU C 814 LEU C 819 5 6 HELIX 42 AE6 TRP C 860 PHE C 868 1 9 HELIX 43 AE7 SER C 881 SER C 892 1 12 HELIX 44 AE8 SER C 894 ALA C 903 1 10 HELIX 45 AE9 PRO C 904 TYR C 908 5 5 HELIX 46 AF1 PRO D 183 ARG D 187 5 5 HELIX 47 AF2 ILE D 199 LEU D 206 1 8 HELIX 48 AF3 ASP D 223 THR D 227 5 5 HELIX 49 AF4 VAL D 228 TRP D 235 1 8 HELIX 50 AF5 PRO D 255 ARG D 271 1 17 HELIX 51 AF6 ASN D 291 LEU D 302 1 12 HELIX 52 AF7 ALA D 329 ARG D 333 5 5 HELIX 53 AF8 SER D 339 LYS D 350 1 12 HELIX 54 AF9 VAL D 364 TYR D 374 5 11 SHEET 1 AA1 2 LEU A 504 GLU A 505 0 SHEET 2 AA1 2 GLY A 512 MET A 513 -1 O MET A 513 N LEU A 504 SHEET 1 AA2 3 CYS A 557 CYS A 559 0 SHEET 2 AA2 3 GLU A 545 MET A 548 -1 N LEU A 547 O PHE A 558 SHEET 3 AA2 3 THR F 3 GLN F 5 -1 O LYS F 4 N VAL A 546 SHEET 1 AA3 7 MET A 682 VAL A 684 0 SHEET 2 AA3 7 VAL A 657 SER A 663 1 N ALA A 662 O MET A 682 SHEET 3 AA3 7 ILE A 634 LEU A 639 1 N VAL A 636 O ILE A 661 SHEET 4 AA3 7 LEU A 703 GLY A 706 1 O LEU A 703 N LEU A 637 SHEET 5 AA3 7 PHE A 752 VAL A 758 1 O PHE A 752 N VAL A 704 SHEET 6 AA3 7 ALA A 791 GLY A 796 -1 O TRP A 795 N PHE A 755 SHEET 7 AA3 7 VAL A 778 ASP A 781 -1 N ILE A 780 O ARG A 792 SHEET 1 AA4 2 ALA A 788 HIS A 789 0 SHEET 2 AA4 2 VAL A 830 ARG A 831 1 O VAL A 830 N HIS A 789 SHEET 1 AA5 3 ARG A 823 ALA A 825 0 SHEET 2 AA5 3 VAL A 850 MET A 852 -1 O PHE A 851 N ILE A 824 SHEET 3 AA5 3 LYS A 855 ASP A 857 -1 O LYS A 855 N MET A 852 SHEET 1 AA6 6 LEU B 218 HIS B 220 0 SHEET 2 AA6 6 VAL B 192 SER B 194 1 N SER B 194 O LYS B 219 SHEET 3 AA6 6 LEU B 240 ALA B 244 1 O TYR B 242 N LEU B 193 SHEET 4 AA6 6 PHE B 281 ASP B 286 1 O MET B 283 N VAL B 241 SHEET 5 AA6 6 ARG B 322 SER B 325 -1 O ARG B 322 N ASP B 286 SHEET 6 AA6 6 VAL B 307 THR B 308 -1 N VAL B 307 O VAL B 323 SHEET 1 AA7 2 LEU C 504 GLU C 505 0 SHEET 2 AA7 2 GLY C 512 MET C 513 -1 O MET C 513 N LEU C 504 SHEET 1 AA8 3 CYS C 557 CYS C 559 0 SHEET 2 AA8 3 GLU C 545 MET C 548 -1 N LEU C 547 O PHE C 558 SHEET 3 AA8 3 THR G 3 GLN G 5 -1 O LYS G 4 N VAL C 546 SHEET 1 AA9 7 MET C 682 VAL C 684 0 SHEET 2 AA9 7 VAL C 657 SER C 663 1 N ALA C 662 O MET C 682 SHEET 3 AA9 7 ILE C 634 LEU C 639 1 N VAL C 636 O ILE C 661 SHEET 4 AA9 7 LEU C 703 GLY C 706 1 O ILE C 705 N LEU C 639 SHEET 5 AA9 7 PHE C 752 VAL C 758 1 O PHE C 752 N VAL C 704 SHEET 6 AA9 7 ALA C 791 GLY C 796 -1 O TRP C 795 N PHE C 755 SHEET 7 AA9 7 VAL C 778 ASP C 781 -1 N ILE C 780 O ARG C 792 SHEET 1 AB1 2 ALA C 788 HIS C 789 0 SHEET 2 AB1 2 VAL C 830 ARG C 831 1 O VAL C 830 N HIS C 789 SHEET 1 AB2 3 ARG C 823 ALA C 825 0 SHEET 2 AB2 3 VAL C 850 MET C 852 -1 O PHE C 851 N ILE C 824 SHEET 3 AB2 3 LYS C 855 ASP C 857 -1 O LYS C 855 N MET C 852 SHEET 1 AB3 6 LEU D 218 HIS D 220 0 SHEET 2 AB3 6 VAL D 192 SER D 194 1 N SER D 194 O LYS D 219 SHEET 3 AB3 6 LEU D 240 ALA D 244 1 O TYR D 242 N LEU D 193 SHEET 4 AB3 6 PHE D 281 ASP D 286 1 O MET D 283 N VAL D 241 SHEET 5 AB3 6 VAL D 321 SER D 325 -1 O TRP D 324 N PHE D 284 SHEET 6 AB3 6 VAL D 307 ILE D 309 -1 N ILE D 309 O VAL D 321 LINK SG CYS A 494 ZN ZN A1001 1555 1555 2.17 LINK SG CYS A 497 ZN ZN A1001 1555 1555 2.26 LINK SG CYS A 514 ZN ZN A1001 1555 1555 2.42 LINK SG CYS A 517 ZN ZN A1001 1555 1555 2.28 LINK SG CYS A 537 ZN ZN A1002 1555 1555 2.57 LINK SG CYS A 540 ZN ZN A1002 1555 1555 2.24 LINK SG CYS A 549 ZN ZN A1003 1555 1555 2.52 LINK SG CYS A 554 ZN ZN A1003 1555 1555 2.22 LINK SG CYS A 559 ZN ZN A1002 1555 1555 2.42 LINK SG CYS A 562 ZN ZN A1002 1555 1555 2.16 LINK SG CYS A 583 ZN ZN A1003 1555 1555 2.13 LINK SG CYS A 586 ZN ZN A1003 1555 1555 2.30 LINK SG CYS C 494 ZN ZN C1001 1555 1555 2.23 LINK SG CYS C 497 ZN ZN C1001 1555 1555 2.28 LINK SG CYS C 514 ZN ZN C1001 1555 1555 2.48 LINK SG CYS C 517 ZN ZN C1001 1555 1555 2.28 LINK SG CYS C 537 ZN ZN C1002 1555 1555 2.48 LINK SG CYS C 540 ZN ZN C1002 1555 1555 2.42 LINK SG CYS C 549 ZN ZN C1003 1555 1555 2.48 LINK SG CYS C 554 ZN ZN C1003 1555 1555 2.18 LINK SG CYS C 559 ZN ZN C1002 1555 1555 2.32 LINK SG CYS C 562 ZN ZN C1002 1555 1555 2.10 LINK SG CYS C 583 ZN ZN C1003 1555 1555 2.12 LINK SG CYS C 586 ZN ZN C1003 1555 1555 2.27 CISPEP 1 PRO B 274 GLY B 275 0 -10.45 CISPEP 2 PRO D 274 GLY D 275 0 -11.02 CISPEP 3 PRO D 360 THR D 361 0 8.06 SITE 1 AC1 4 CYS A 494 CYS A 497 CYS A 514 CYS A 517 SITE 1 AC2 4 CYS A 537 CYS A 540 CYS A 559 CYS A 562 SITE 1 AC3 4 CYS A 549 CYS A 554 CYS A 583 CYS A 586 SITE 1 AC4 16 PHE A 640 ASP A 641 GLY A 642 ILE A 643 SITE 2 AC4 16 THR A 645 SER A 663 GLU A 664 VAL A 665 SITE 3 AC4 16 CYS A 666 ASP A 686 VAL A 687 ARG A 688 SITE 4 AC4 16 GLY A 707 ARG A 891 SER A 892 TRP A 893 SITE 1 AC5 4 CYS C 494 CYS C 497 CYS C 514 CYS C 517 SITE 1 AC6 4 CYS C 537 CYS C 540 CYS C 559 CYS C 562 SITE 1 AC7 4 CYS C 549 CYS C 554 CYS C 583 CYS C 586 SITE 1 AC8 17 PHE C 640 ASP C 641 GLY C 642 ILE C 643 SITE 2 AC8 17 THR C 645 SER C 663 GLU C 664 VAL C 665 SITE 3 AC8 17 CYS C 666 ASP C 686 VAL C 687 ARG C 688 SITE 4 AC8 17 GLY C 707 LEU C 730 ARG C 891 SER C 892 SITE 5 AC8 17 TRP C 893 CRYST1 183.823 183.823 123.265 90.00 90.00 120.00 P 65 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.005440 0.003141 0.000000 0.00000 SCALE2 0.000000 0.006282 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008113 0.00000