HEADER TRANSFERASE 21-MAY-14 4UMT TITLE STRUCTURE OF MELK IN COMPLEX WITH INHIBITORS COMPND MOL_ID: 1; COMPND 2 MOLECULE: MATERNAL EMBRYONIC LEUCINE ZIPPER KINASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: HMELK, PROTEIN KINASE EG3, PEG3 KINASE, PROTEIN KINASE PK38, COMPND 5 HPK38, TYROSINE-PROTEIN KINASE MELK; COMPND 6 EC: 2.7.11.1, 2.7.10.2; COMPND 7 ENGINEERED: YES; COMPND 8 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 OTHER_DETAILS: IMAGE CLONE KEYWDS TRANSFERASE, FRAGMENT BASED DRUG DESIGN EXPDTA X-RAY DIFFRACTION AUTHOR C.N.JOHNSON,V.BERDINI,L.BEKE,P.BONNET,D.BREHMER,J.E.COYLE,P.J.DAY, AUTHOR 2 M.FREDERICKSON,E.J.E.FREYNE,R.A.H.J.GILISSEN,C.C.F.HAMLETT,S.HOWARD, AUTHOR 3 L.MEERPOEL,R.MCMENAMIN,S.PATEL,D.C.REES,A.SHARFF,F.SOMMEN,T.WU, AUTHOR 4 J.T.M.LINDERS REVDAT 3 08-MAY-24 4UMT 1 REMARK REVDAT 2 28-JAN-15 4UMT 1 JRNL REVDAT 1 22-OCT-14 4UMT 0 JRNL AUTH C.N.JOHNSON,C.ADELINET,V.BERDINI,L.BEKE,P.BONNET,D.BREHMER, JRNL AUTH 2 F.CALO,J.E.COYLE,P.J.DAY,M.FREDERICKSON,E.J.E.FREYNE, JRNL AUTH 3 R.A.H.J.GILISSEN,C.C.F.HAMLETT,S.HOWARD,L.MEERPOEL, JRNL AUTH 4 L.MEVELLEC,R.MCMENAMIN,E.PASQUIER,S.PATEL,D.C.REES, JRNL AUTH 5 J.T.M.LINDERS JRNL TITL STRUCTURE-BASED DESIGN OF TYPE II INHIBITORS APPLIED TO JRNL TITL 2 MATERNAL EMBRYONIC LEUCINE ZIPPER KINASE. JRNL REF ACS MED.CHEM.LETT. V. 6 31 2015 JRNL REFN ISSN 1948-5875 JRNL PMID 25589926 JRNL DOI 10.1021/ML5001273 REMARK 2 REMARK 2 RESOLUTION. 1.98 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0064 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.98 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 89.44 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 3 NUMBER OF REFLECTIONS : 26683 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.214 REMARK 3 R VALUE (WORKING SET) : 0.213 REMARK 3 FREE R VALUE : 0.236 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 1388 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.98 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.03 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1942 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.94 REMARK 3 BIN R VALUE (WORKING SET) : 0.3030 REMARK 3 BIN FREE R VALUE SET COUNT : 112 REMARK 3 BIN FREE R VALUE : 0.3390 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2565 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 33 REMARK 3 SOLVENT ATOMS : 198 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 47.20 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.00000 REMARK 3 B22 (A**2) : 0.00000 REMARK 3 B33 (A**2) : 0.00000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.182 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.154 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): NULL REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): NULL REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.954 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.948 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2659 ; 0.011 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 2577 ; 0.000 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3596 ; 1.364 ; 1.963 REMARK 3 BOND ANGLES OTHERS (DEGREES): 5932 ; 3.568 ; 2.980 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 314 ; 5.508 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 122 ;36.694 ;23.918 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 485 ;16.841 ;15.031 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 13 ;20.052 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 396 ; 0.082 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2922 ; 0.002 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 604 ; 0.003 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1262 ; 2.001 ;10.985 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1261 ; 1.995 ;10.981 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1397 ; 2.422 ;11.167 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 1398 ; 2.422 ;11.165 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 935 ; 5.176 ;23.938 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 926 ; 5.200 ;23.990 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. U VALUES REFINED INDIVIDUALLY. REMARK 4 REMARK 4 4UMT COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 21-MAY-14. REMARK 100 THE DEPOSITION ID IS D_1290060712. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 16-JUN-10 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID29 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 28321 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.980 REMARK 200 RESOLUTION RANGE LOW (A) : 89.990 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 200 DATA REDUNDANCY : 3.500 REMARK 200 R MERGE (I) : 0.04000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 2.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: OTHER REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NONE REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 60.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.10 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+2/3 REMARK 290 6555 -X,-X+Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 21.62900 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 43.25800 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 43.25800 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 21.62900 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -19 REMARK 465 GLY A -18 REMARK 465 SER A -17 REMARK 465 SER A -16 REMARK 465 HIS A -15 REMARK 465 HIS A -14 REMARK 465 HIS A -13 REMARK 465 HIS A -12 REMARK 465 HIS A -11 REMARK 465 HIS A -10 REMARK 465 SER A -9 REMARK 465 SER A -8 REMARK 465 GLY A -7 REMARK 465 LEU A -6 REMARK 465 VAL A -5 REMARK 465 PRO A -4 REMARK 465 ARG A -3 REMARK 465 GLY A -2 REMARK 465 SER A -1 REMARK 465 HIS A 0 REMARK 465 MET A 1 REMARK 465 LYS A 2 REMARK 465 CYS A 154 REMARK 465 ALA A 155 REMARK 465 LYS A 156 REMARK 465 PRO A 157 REMARK 465 LYS A 158 REMARK 465 GLY A 159 REMARK 465 ASN A 160 REMARK 465 LYS A 161 REMARK 465 ASP A 162 REMARK 465 TYR A 163 REMARK 465 HIS A 164 REMARK 465 LEU A 165 REMARK 465 GLN A 166 REMARK 465 THR A 167 REMARK 465 CYS A 168 REMARK 465 LEU A 334 REMARK 465 SER A 335 REMARK 465 SER A 336 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 LEU A 217 C VAL A 218 N -0.177 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 251 NE - CZ - NH1 ANGL. DEV. = 4.5 DEGREES REMARK 500 ARG A 251 NE - CZ - NH2 ANGL. DEV. = -4.7 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 HIS A 14 -159.17 -110.76 REMARK 500 THR A 78 -168.74 -129.68 REMARK 500 ASP A 102 -69.87 79.97 REMARK 500 ARG A 131 -2.05 79.99 REMARK 500 ASP A 132 48.33 -142.55 REMARK 500 LEU A 244 54.55 -103.86 REMARK 500 ILE A 280 -88.24 -104.04 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE DMS A 1334 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 47W A 1335 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4UMP RELATED DB: PDB REMARK 900 STRUCTURE OF MELK IN COMPLEX WITH INHIBITORS REMARK 900 RELATED ID: 4UMQ RELATED DB: PDB REMARK 900 STRUCTURE OF MELK IN COMPLEX WITH INHIBITORS REMARK 900 RELATED ID: 4UMR RELATED DB: PDB REMARK 900 STRUCTURE OF MELK IN COMPLEX WITH INHIBITORS REMARK 900 RELATED ID: 4UMU RELATED DB: PDB REMARK 900 STRUCTURE OF MELK IN COMPLEX WITH INHIBITORS REMARK 999 REMARK 999 SEQUENCE REMARK 999 POINT MUTATIONS AND HIS TAG ARE PRESENT DBREF 4UMT A 1 336 UNP Q14680 MELK_HUMAN 1 336 SEQADV 4UMT MET A -19 UNP Q14680 EXPRESSION TAG SEQADV 4UMT GLY A -18 UNP Q14680 EXPRESSION TAG SEQADV 4UMT SER A -17 UNP Q14680 EXPRESSION TAG SEQADV 4UMT SER A -16 UNP Q14680 EXPRESSION TAG SEQADV 4UMT HIS A -15 UNP Q14680 EXPRESSION TAG SEQADV 4UMT HIS A -14 UNP Q14680 EXPRESSION TAG SEQADV 4UMT HIS A -13 UNP Q14680 EXPRESSION TAG SEQADV 4UMT HIS A -12 UNP Q14680 EXPRESSION TAG SEQADV 4UMT HIS A -11 UNP Q14680 EXPRESSION TAG SEQADV 4UMT HIS A -10 UNP Q14680 EXPRESSION TAG SEQADV 4UMT SER A -9 UNP Q14680 EXPRESSION TAG SEQADV 4UMT SER A -8 UNP Q14680 EXPRESSION TAG SEQADV 4UMT GLY A -7 UNP Q14680 EXPRESSION TAG SEQADV 4UMT LEU A -6 UNP Q14680 EXPRESSION TAG SEQADV 4UMT VAL A -5 UNP Q14680 EXPRESSION TAG SEQADV 4UMT PRO A -4 UNP Q14680 EXPRESSION TAG SEQADV 4UMT ARG A -3 UNP Q14680 EXPRESSION TAG SEQADV 4UMT GLY A -2 UNP Q14680 EXPRESSION TAG SEQADV 4UMT SER A -1 UNP Q14680 EXPRESSION TAG SEQADV 4UMT HIS A 0 UNP Q14680 EXPRESSION TAG SEQADV 4UMT THR A 213 UNP Q14680 ASN 213 ENGINEERED MUTATION SEQADV 4UMT ALA A 214 UNP Q14680 VAL 214 ENGINEERED MUTATION SEQADV 4UMT ALA A 215 UNP Q14680 MET 215 ENGINEERED MUTATION SEQADV 4UMT VAL A 218 UNP Q14680 TYR 218 ENGINEERED MUTATION SEQADV 4UMT ALA A 219 UNP Q14680 LYS 219 ENGINEERED MUTATION SEQRES 1 A 356 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 356 LEU VAL PRO ARG GLY SER HIS MET LYS ASP TYR ASP GLU SEQRES 3 A 356 LEU LEU LYS TYR TYR GLU LEU HIS GLU THR ILE GLY THR SEQRES 4 A 356 GLY GLY PHE ALA LYS VAL LYS LEU ALA CYS HIS ILE LEU SEQRES 5 A 356 THR GLY GLU MET VAL ALA ILE LYS ILE MET ASP LYS ASN SEQRES 6 A 356 THR LEU GLY SER ASP LEU PRO ARG ILE LYS THR GLU ILE SEQRES 7 A 356 GLU ALA LEU LYS ASN LEU ARG HIS GLN HIS ILE CYS GLN SEQRES 8 A 356 LEU TYR HIS VAL LEU GLU THR ALA ASN LYS ILE PHE MET SEQRES 9 A 356 VAL LEU GLU TYR CYS PRO GLY GLY GLU LEU PHE ASP TYR SEQRES 10 A 356 ILE ILE SER GLN ASP ARG LEU SER GLU GLU GLU THR ARG SEQRES 11 A 356 VAL VAL PHE ARG GLN ILE VAL SER ALA VAL ALA TYR VAL SEQRES 12 A 356 HIS SER GLN GLY TYR ALA HIS ARG ASP LEU LYS PRO GLU SEQRES 13 A 356 ASN LEU LEU PHE ASP GLU TYR HIS LYS LEU LYS LEU ILE SEQRES 14 A 356 ASP PHE GLY LEU CYS ALA LYS PRO LYS GLY ASN LYS ASP SEQRES 15 A 356 TYR HIS LEU GLN THR CYS CYS GLY SER LEU ALA TYR ALA SEQRES 16 A 356 ALA PRO GLU LEU ILE GLN GLY LYS SER TYR LEU GLY SER SEQRES 17 A 356 GLU ALA ASP VAL TRP SER MET GLY ILE LEU LEU TYR VAL SEQRES 18 A 356 LEU MET CYS GLY PHE LEU PRO PHE ASP ASP ASP THR ALA SEQRES 19 A 356 ALA ALA LEU VAL ALA LYS ILE MET ARG GLY LYS TYR ASP SEQRES 20 A 356 VAL PRO LYS TRP LEU SER PRO SER SER ILE LEU LEU LEU SEQRES 21 A 356 GLN GLN MET LEU GLN VAL ASP PRO LYS LYS ARG ILE SER SEQRES 22 A 356 MET LYS ASN LEU LEU ASN HIS PRO TRP ILE MET GLN ASP SEQRES 23 A 356 TYR ASN TYR PRO VAL GLU TRP GLN SER LYS ASN PRO PHE SEQRES 24 A 356 ILE HIS LEU ASP ASP ASP CYS VAL THR GLU LEU SER VAL SEQRES 25 A 356 HIS HIS ARG ASN ASN ARG GLN THR MET GLU ASP LEU ILE SEQRES 26 A 356 SER LEU TRP GLN TYR ASP HIS LEU THR ALA THR TYR LEU SEQRES 27 A 356 LEU LEU LEU ALA LYS LYS ALA ARG GLY LYS PRO VAL ARG SEQRES 28 A 356 LEU ARG LEU SER SER HET DMS A1334 4 HET 47W A1335 56 HETNAM DMS DIMETHYL SULFOXIDE HETNAM 47W 1-(4-{[3-(ISOQUINOLIN-7-YL)PROP-2-YN-1-YL]OXY}-2- HETNAM 2 47W METHOXYBENZYL)PIPERAZINEDIIUM FORMUL 2 DMS C2 H6 O S FORMUL 3 47W C24 H27 N3 O2 2+ FORMUL 4 HOH *198(H2 O) HELIX 1 1 GLU A 6 TYR A 10 1 5 HELIX 2 2 LYS A 44 GLY A 48 1 5 HELIX 3 3 ASP A 50 ASN A 63 1 14 HELIX 4 4 LEU A 94 ASP A 102 1 9 HELIX 5 5 SER A 105 GLN A 126 1 22 HELIX 6 6 LYS A 134 GLU A 136 5 3 HELIX 7 7 CYS A 169 ALA A 175 5 7 HELIX 8 8 ALA A 176 GLN A 181 1 6 HELIX 9 9 LEU A 186 GLY A 205 1 20 HELIX 10 10 THR A 213 GLY A 224 1 12 HELIX 11 11 SER A 233 LEU A 244 1 12 HELIX 12 12 ASP A 247 ARG A 251 5 5 HELIX 13 13 SER A 253 ASN A 259 1 7 HELIX 14 14 ASP A 283 ARG A 295 1 13 HELIX 15 15 ASN A 297 SER A 306 1 10 HELIX 16 16 ASP A 311 ARG A 326 1 16 SHEET 1 AA 5 TYR A 11 GLY A 18 0 SHEET 2 AA 5 ALA A 23 HIS A 30 -1 O VAL A 25 N ILE A 17 SHEET 3 AA 5 GLU A 35 ASP A 43 -1 O GLU A 35 N HIS A 30 SHEET 4 AA 5 LYS A 81 GLU A 87 -1 O ILE A 82 N MET A 42 SHEET 5 AA 5 LEU A 72 GLU A 77 -1 N TYR A 73 O VAL A 85 SHEET 1 AB 3 GLY A 92 GLU A 93 0 SHEET 2 AB 3 LEU A 138 PHE A 140 -1 N PHE A 140 O GLY A 92 SHEET 3 AB 3 LEU A 146 LEU A 148 -1 O LYS A 147 N LEU A 139 SITE 1 AC1 6 GLU A 35 MET A 36 TYR A 73 ALA A 322 SITE 2 AC1 6 ARG A 326 HOH A2015 SITE 1 AC2 13 ALA A 38 GLU A 57 ALA A 60 ILE A 69 SITE 2 AC2 13 GLU A 87 CYS A 89 ALA A 129 HIS A 130 SITE 3 AC2 13 LEU A 139 ILE A 149 ASP A 150 HOH A2027 SITE 4 AC2 13 HOH A2198 CRYST1 103.274 103.274 64.887 90.00 90.00 120.00 P 31 2 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009683 0.005590 0.000000 0.00000 SCALE2 0.000000 0.011181 0.000000 0.00000 SCALE3 0.000000 0.000000 0.015411 0.00000