HEADER    LYASE                                   30-JUN-14   4URG              
TITLE     CRYSTAL STRUCTURE OF GGDEF DOMAIN FROM T.MARITIMA (ACTIVE-LIKE DIMER) 
COMPND    MOL_ID: 1;                                                            
COMPND   2 MOLECULE: DIGUANYLATE CYCLASE;                                       
COMPND   3 CHAIN: A, B;                                                         
COMPND   4 FRAGMENT: GGDEF DOAMIN;                                              
COMPND   5 ENGINEERED: YES                                                      
SOURCE    MOL_ID: 1;                                                            
SOURCE   2 ORGANISM_SCIENTIFIC: THERMOTOGA MARITIMA;                            
SOURCE   3 ORGANISM_TAXID: 2336;                                                
SOURCE   4 EXPRESSION_SYSTEM: ESCHERICHIA COLI;                                 
SOURCE   5 EXPRESSION_SYSTEM_TAXID: 469008;                                     
SOURCE   6 EXPRESSION_SYSTEM_STRAIN: BL21(DE3);                                 
SOURCE   7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID;                              
SOURCE   8 EXPRESSION_SYSTEM_PLASMID: PET22B                                    
KEYWDS    LYASE                                                                 
EXPDTA    X-RAY DIFFRACTION                                                     
AUTHOR    A.DEEPTHI,C.W.LIEW,Z.X.LIANG,K.SWAMINATHAN,J.LESCAR                   
REVDAT   3   10-JAN-24 4URG    1       REMARK HETSYN                            
REVDAT   2   12-NOV-14 4URG    1       JRNL                                     
REVDAT   1   08-OCT-14 4URG    0                                                
JRNL        AUTH   A.DEEPTHI,C.W.LIEW,Z.X.LIANG,S.KUNCHITHAPADAM,J.LESCAR       
JRNL        TITL   STRUCTURE OF A DIGUANYLATE CYCLASE FROM THERMOTOGA MARITIMA: 
JRNL        TITL 2 INSIGHTS INTO ACTIVATION, FEEDBACK INHIBITION AND            
JRNL        TITL 3 THERMOSTABILITY                                              
JRNL        REF    PLOS ONE                      V.   9 10912 2014              
JRNL        REFN                   ESSN 1932-6203                               
JRNL        PMID   25360685                                                     
JRNL        DOI    10.1371/JOURNAL.PONE.0110912                                 
REMARK   2                                                                      
REMARK   2 RESOLUTION.    1.90 ANGSTROMS.                                       
REMARK   3                                                                      
REMARK   3 REFINEMENT.                                                          
REMARK   3   PROGRAM     : BUSTER 2.10.0                                        
REMARK   3   AUTHORS     : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER,              
REMARK   3               : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN,              
REMARK   3               : WOMACK,MATTHEWS,TEN EYCK,TRONRUD                     
REMARK   3                                                                      
REMARK   3  DATA USED IN REFINEMENT.                                            
REMARK   3   RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90                           
REMARK   3   RESOLUTION RANGE LOW  (ANGSTROMS) : 22.71                          
REMARK   3   DATA CUTOFF            (SIGMA(F)) : 0.000                          
REMARK   3   COMPLETENESS FOR RANGE        (%) : 100.0                          
REMARK   3   NUMBER OF REFLECTIONS             : 27172                          
REMARK   3                                                                      
REMARK   3  FIT TO DATA USED IN REFINEMENT.                                     
REMARK   3   CROSS-VALIDATION METHOD           : THROUGHOUT                     
REMARK   3   FREE R VALUE TEST SET SELECTION   : RANDOM                         
REMARK   3   R VALUE     (WORKING + TEST SET)  : 0.209                          
REMARK   3   R VALUE            (WORKING SET)  : 0.207                          
REMARK   3   FREE R VALUE                      : 0.241                          
REMARK   3   FREE R VALUE TEST SET SIZE   (%)  : 5.010                          
REMARK   3   FREE R VALUE TEST SET COUNT       : 1362                           
REMARK   3   ESTIMATED ERROR OF FREE R VALUE   : NULL                           
REMARK   3                                                                      
REMARK   3  FIT IN THE HIGHEST RESOLUTION BIN.                                  
REMARK   3   TOTAL NUMBER OF BINS USED               : 14                       
REMARK   3   BIN RESOLUTION RANGE HIGH   (ANGSTROMS) : 1.90                     
REMARK   3   BIN RESOLUTION RANGE LOW    (ANGSTROMS) : 1.97                     
REMARK   3   BIN COMPLETENESS (WORKING+TEST)     (%) : 99.97                    
REMARK   3   REFLECTIONS IN BIN (WORKING + TEST SET) : 2827                     
REMARK   3   BIN R VALUE        (WORKING + TEST SET) : 0.2081                   
REMARK   3   REFLECTIONS IN BIN        (WORKING SET) : 2686                     
REMARK   3   BIN R VALUE               (WORKING SET) : 0.2079                   
REMARK   3   BIN FREE R VALUE                        : 0.2109                   
REMARK   3   BIN FREE R VALUE TEST SET SIZE      (%) : 4.99                     
REMARK   3   BIN FREE R VALUE TEST SET COUNT         : 141                      
REMARK   3   ESTIMATED ERROR OF BIN FREE R VALUE     : NULL                     
REMARK   3                                                                      
REMARK   3  NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT.                    
REMARK   3   PROTEIN ATOMS            : 2508                                    
REMARK   3   NUCLEIC ACID ATOMS       : 0                                       
REMARK   3   HETEROGEN ATOMS          : 92                                      
REMARK   3   SOLVENT ATOMS            : 144                                     
REMARK   3                                                                      
REMARK   3  B VALUES.                                                           
REMARK   3   FROM WILSON PLOT           (A**2) : 21.40                          
REMARK   3   MEAN B VALUE      (OVERALL, A**2) : 25.07                          
REMARK   3   OVERALL ANISOTROPIC B VALUE.                                       
REMARK   3    B11 (A**2) : 0.86750                                              
REMARK   3    B22 (A**2) : -0.12050                                             
REMARK   3    B33 (A**2) : -0.74690                                             
REMARK   3    B12 (A**2) : 0.00000                                              
REMARK   3    B13 (A**2) : -0.17730                                             
REMARK   3    B23 (A**2) : 0.00000                                              
REMARK   3                                                                      
REMARK   3  ESTIMATED COORDINATE ERROR.                                         
REMARK   3   ESD FROM LUZZATI PLOT                    (A) : 0.236               
REMARK   3   DPI (BLOW EQ-10) BASED ON R VALUE        (A) : 0.162               
REMARK   3   DPI (BLOW EQ-9) BASED ON FREE R VALUE    (A) : 0.145               
REMARK   3   DPI (CRUICKSHANK) BASED ON R VALUE       (A) : 0.163               
REMARK   3   DPI (CRUICKSHANK) BASED ON FREE R VALUE  (A) : 0.146               
REMARK   3                                                                      
REMARK   3   REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797                
REMARK   3               CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601     
REMARK   3                                                                      
REMARK   3 CORRELATION COEFFICIENTS.                                            
REMARK   3   CORRELATION COEFFICIENT FO-FC      : 0.927                         
REMARK   3   CORRELATION COEFFICIENT FO-FC FREE : 0.901                         
REMARK   3                                                                      
REMARK   3   NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15                    
REMARK   3   TERM                          COUNT    WEIGHT   FUNCTION.          
REMARK   3    BOND LENGTHS              : 2682   ; 2.000  ; HARMONIC            
REMARK   3    BOND ANGLES               : 3633   ; 2.000  ; HARMONIC            
REMARK   3    TORSION ANGLES            : 962    ; 2.000  ; SINUSOIDAL          
REMARK   3    TRIGONAL CARBON PLANES    : 63     ; 2.000  ; HARMONIC            
REMARK   3    GENERAL PLANES            : 381    ; 5.000  ; HARMONIC            
REMARK   3    ISOTROPIC THERMAL FACTORS : 2682   ; 20.000 ; HARMONIC            
REMARK   3    BAD NON-BONDED CONTACTS   : NULL   ; NULL   ; NULL                
REMARK   3    IMPROPER TORSIONS         : NULL   ; NULL   ; NULL                
REMARK   3    PSEUDOROTATION ANGLES     : NULL   ; NULL   ; NULL                
REMARK   3    CHIRAL IMPROPER TORSION   : 326    ; 5.000  ; SEMIHARMONIC        
REMARK   3    SUM OF OCCUPANCIES        : NULL   ; NULL   ; NULL                
REMARK   3    UTILITY DISTANCES         : NULL   ; NULL   ; NULL                
REMARK   3    UTILITY ANGLES            : NULL   ; NULL   ; NULL                
REMARK   3    UTILITY TORSION           : NULL   ; NULL   ; NULL                
REMARK   3    IDEAL-DIST CONTACT TERM   : 3089   ; 4.000  ; SEMIHARMONIC        
REMARK   3                                                                      
REMARK   3   RMS DEVIATIONS FROM IDEAL VALUES.                                  
REMARK   3    BOND LENGTHS                       (A) : 0.010                    
REMARK   3    BOND ANGLES                  (DEGREES) : 1.03                     
REMARK   3    PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 3.05                     
REMARK   3    OTHER TORSION ANGLES         (DEGREES) : 17.44                    
REMARK   3                                                                      
REMARK   3  TLS DETAILS                                                         
REMARK   3   NUMBER OF TLS GROUPS  : NULL                                       
REMARK   3                                                                      
REMARK   3  OTHER REFINEMENT REMARKS: NULL                                      
REMARK   4                                                                      
REMARK   4 4URG COMPLIES WITH FORMAT V. 3.30, 13-JUL-11                         
REMARK 100                                                                      
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 30-JUN-14.                  
REMARK 100 THE DEPOSITION ID IS D_1290061121.                                   
REMARK 200                                                                      
REMARK 200 EXPERIMENTAL DETAILS                                                 
REMARK 200  EXPERIMENT TYPE                : X-RAY DIFFRACTION                  
REMARK 200  DATE OF DATA COLLECTION        : NULL                               
REMARK 200  TEMPERATURE           (KELVIN) : 291                                
REMARK 200  PH                             : 4.0                                
REMARK 200  NUMBER OF CRYSTALS USED        : 2                                  
REMARK 200                                                                      
REMARK 200  SYNCHROTRON              (Y/N) : Y                                  
REMARK 200  RADIATION SOURCE               : SLS                                
REMARK 200  BEAMLINE                       : X06SA                              
REMARK 200  X-RAY GENERATOR MODEL          : NULL                               
REMARK 200  MONOCHROMATIC OR LAUE    (M/L) : M                                  
REMARK 200  WAVELENGTH OR RANGE        (A) : 1.00                               
REMARK 200  MONOCHROMATOR                  : NULL                               
REMARK 200  OPTICS                         : NULL                               
REMARK 200                                                                      
REMARK 200  DETECTOR TYPE                  : PIXEL                              
REMARK 200  DETECTOR MANUFACTURER          : DECTRIS PILATUS                    
REMARK 200  INTENSITY-INTEGRATION SOFTWARE : MOSFLM                             
REMARK 200  DATA SCALING SOFTWARE          : SCALA                              
REMARK 200                                                                      
REMARK 200  NUMBER OF UNIQUE REFLECTIONS   : 27197                              
REMARK 200  RESOLUTION RANGE HIGH      (A) : 1.900                              
REMARK 200  RESOLUTION RANGE LOW       (A) : 36.490                             
REMARK 200  REJECTION CRITERIA  (SIGMA(I)) : 5.000                              
REMARK 200                                                                      
REMARK 200 OVERALL.                                                             
REMARK 200  COMPLETENESS FOR RANGE     (%) : 100.0                              
REMARK 200  DATA REDUNDANCY                : 6.800                              
REMARK 200  R MERGE                    (I) : 0.12000                            
REMARK 200  R SYM                      (I) : NULL                               
REMARK 200  <I/SIGMA(I)> FOR THE DATA SET  : 11.4000                            
REMARK 200                                                                      
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.                                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE LOW  (A) : 2.00                     
REMARK 200  COMPLETENESS FOR SHELL     (%) : 100.0                              
REMARK 200  DATA REDUNDANCY IN SHELL       : 6.90                               
REMARK 200  R MERGE FOR SHELL          (I) : 0.32000                            
REMARK 200  R SYM FOR SHELL            (I) : NULL                               
REMARK 200  <I/SIGMA(I)> FOR SHELL         : 5.900                              
REMARK 200                                                                      
REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH                              
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT        
REMARK 200 SOFTWARE USED: BALBES                                                
REMARK 200 STARTING MODEL: PDB ENTRY 3ICL                                       
REMARK 200                                                                      
REMARK 200 REMARK: NONE                                                         
REMARK 280                                                                      
REMARK 280 CRYSTAL                                                              
REMARK 280 SOLVENT CONTENT, VS   (%): 46.09                                     
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.28                     
REMARK 280                                                                      
REMARK 280 CRYSTALLIZATION CONDITIONS: 0.15 M LITHIUM SULFATE, 0.1 M CITRIC     
REMARK 280  ACID (PH 4.0), 10% (W/V) PEG 6000                                   
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY                                            
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1                          
REMARK 290                                                                      
REMARK 290      SYMOP   SYMMETRY                                                
REMARK 290     NNNMMM   OPERATOR                                                
REMARK 290       1555   X,Y,Z                                                   
REMARK 290       2555   -X,Y,-Z                                                 
REMARK 290       3555   X+1/2,Y+1/2,Z                                           
REMARK 290       4555   -X+1/2,Y+1/2,-Z                                         
REMARK 290                                                                      
REMARK 290     WHERE NNN -> OPERATOR NUMBER                                     
REMARK 290           MMM -> TRANSLATION VECTOR                                  
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS                            
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM             
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY                
REMARK 290 RELATED MOLECULES.                                                   
REMARK 290   SMTRY1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 290   SMTRY1   2 -1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   2  0.000000  1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   2  0.000000  0.000000 -1.000000        0.00000            
REMARK 290   SMTRY1   3  1.000000  0.000000  0.000000       54.44500            
REMARK 290   SMTRY2   3  0.000000  1.000000  0.000000       26.06000            
REMARK 290   SMTRY3   3  0.000000  0.000000  1.000000        0.00000            
REMARK 290   SMTRY1   4 -1.000000  0.000000  0.000000       54.44500            
REMARK 290   SMTRY2   4  0.000000  1.000000  0.000000       26.06000            
REMARK 290   SMTRY3   4  0.000000  0.000000 -1.000000        0.00000            
REMARK 290                                                                      
REMARK 290 REMARK: NULL                                                         
REMARK 300                                                                      
REMARK 300 BIOMOLECULE: 1, 2                                                    
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM                
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN                  
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON               
REMARK 300 BURIED SURFACE AREA.                                                 
REMARK 350                                                                      
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN           
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE                
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS          
REMARK 350 GIVEN BELOW.  BOTH NON-CRYSTALLOGRAPHIC AND                          
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.                               
REMARK 350                                                                      
REMARK 350 BIOMOLECULE: 1                                                       
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC                         
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC                  
REMARK 350 SOFTWARE USED: PISA                                                  
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A                                     
REMARK 350   BIOMT1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 350   BIOMT2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 350   BIOMT3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 350                                                                      
REMARK 350 BIOMOLECULE: 2                                                       
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC                         
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC                  
REMARK 350 SOFTWARE USED: PISA                                                  
REMARK 350 APPLY THE FOLLOWING TO CHAINS: B                                     
REMARK 350   BIOMT1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 350   BIOMT2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 350   BIOMT3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 465                                                                      
REMARK 465 MISSING RESIDUES                                                     
REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE                       
REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN               
REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.)                
REMARK 465                                                                      
REMARK 465   M RES C SSSEQI                                                     
REMARK 465     MET A   240                                                      
REMARK 465     LYS A   241                                                      
REMARK 465     VAL A   242                                                      
REMARK 465     PRO A   243                                                      
REMARK 465     TYR A   244                                                      
REMARK 465     PHE A   245                                                      
REMARK 465     SER A   246                                                      
REMARK 465     LEU A   247                                                      
REMARK 465     SER A   248                                                      
REMARK 465     LEU A   249                                                      
REMARK 465     GLU A   250                                                      
REMARK 465     HIS A   251                                                      
REMARK 465     HIS A   252                                                      
REMARK 465     HIS A   253                                                      
REMARK 465     HIS A   254                                                      
REMARK 465     HIS A   255                                                      
REMARK 465     HIS A   256                                                      
REMARK 465     HIS B    90                                                      
REMARK 465     LEU B   247                                                      
REMARK 465     SER B   248                                                      
REMARK 465     LEU B   249                                                      
REMARK 465     GLU B   250                                                      
REMARK 465     HIS B   251                                                      
REMARK 465     HIS B   252                                                      
REMARK 465     HIS B   253                                                      
REMARK 465     HIS B   254                                                      
REMARK 465     HIS B   255                                                      
REMARK 465     HIS B   256                                                      
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: CLOSE CONTACTS                                             
REMARK 500                                                                      
REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC             
REMARK 500 SYMMETRY ARE IN CLOSE CONTACT.  AN ATOM LOCATED WITHIN 0.15          
REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A           
REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375             
REMARK 500 INSTEAD OF REMARK 500.  ATOMS WITH NON-BLANK ALTERNATE               
REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS.            
REMARK 500                                                                      
REMARK 500 DISTANCE CUTOFF:                                                     
REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS              
REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS                  
REMARK 500                                                                      
REMARK 500  ATM1  RES C  SSEQI   ATM2  RES C  SSEQI  SSYMOP   DISTANCE          
REMARK 500   NH2  ARG A   115     O    TYR B   176     2555     2.18            
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: TORSION ANGLES                                             
REMARK 500                                                                      
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:            
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                             
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)                    
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-           
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400            
REMARK 500                                                                      
REMARK 500  M RES CSSEQI        PSI       PHI                                   
REMARK 500    ASP A 177       61.03     60.32                                   
REMARK 500    ASN A 202       -2.86     76.64                                   
REMARK 500    TYR B 166      -76.06    -86.53                                   
REMARK 500    GLU B 201     -114.13     58.55                                   
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 800                                                                      
REMARK 800 SITE                                                                 
REMARK 800 SITE_IDENTIFIER: AC1                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE C2E A 1240                
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC2                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE C2E A 1241                
REMARK 900                                                                      
REMARK 900 RELATED ENTRIES                                                      
REMARK 900 RELATED ID: 4URQ   RELATED DB: PDB                                   
REMARK 900 CRYSTAL STRUCTURE OF GGDEF DOMAIN (I SITE MUTANT) FROM T.MARITIMA    
REMARK 900 RELATED ID: 4URS   RELATED DB: PDB                                   
REMARK 900 CRYSTAL STRUCTURE OF GGDEF DOMAIN FROM T.MARITIMA                    
DBREF  4URG A   90   248  UNP    Q9X2A8   Q9X2A8_THEMA    90    248             
DBREF  4URG B   90   248  UNP    Q9X2A8   Q9X2A8_THEMA    90    248             
SEQADV 4URG LEU A  249  UNP  Q9X2A8              EXPRESSION TAG                 
SEQADV 4URG GLU A  250  UNP  Q9X2A8              EXPRESSION TAG                 
SEQADV 4URG HIS A  251  UNP  Q9X2A8              EXPRESSION TAG                 
SEQADV 4URG HIS A  252  UNP  Q9X2A8              EXPRESSION TAG                 
SEQADV 4URG HIS A  253  UNP  Q9X2A8              EXPRESSION TAG                 
SEQADV 4URG HIS A  254  UNP  Q9X2A8              EXPRESSION TAG                 
SEQADV 4URG HIS A  255  UNP  Q9X2A8              EXPRESSION TAG                 
SEQADV 4URG HIS A  256  UNP  Q9X2A8              EXPRESSION TAG                 
SEQADV 4URG LEU B  249  UNP  Q9X2A8              EXPRESSION TAG                 
SEQADV 4URG GLU B  250  UNP  Q9X2A8              EXPRESSION TAG                 
SEQADV 4URG HIS B  251  UNP  Q9X2A8              EXPRESSION TAG                 
SEQADV 4URG HIS B  252  UNP  Q9X2A8              EXPRESSION TAG                 
SEQADV 4URG HIS B  253  UNP  Q9X2A8              EXPRESSION TAG                 
SEQADV 4URG HIS B  254  UNP  Q9X2A8              EXPRESSION TAG                 
SEQADV 4URG HIS B  255  UNP  Q9X2A8              EXPRESSION TAG                 
SEQADV 4URG HIS B  256  UNP  Q9X2A8              EXPRESSION TAG                 
SEQRES   1 A  167  HIS ASP PRO LEU THR GLY LEU PRO ASN ARG ARG TYR PHE          
SEQRES   2 A  167  PHE GLU LEU GLY ASN ARG TYR LEU ASP LEU ALA LYS ARG          
SEQRES   3 A  167  GLU GLY LYS LYS VAL PHE VAL LEU PHE VAL ASP LEU ALA          
SEQRES   4 A  167  GLY PHE LYS ALA ILE ASN ASP THR TYR GLY HIS LEU SER          
SEQRES   5 A  167  GLY ASP GLU VAL LEU LYS THR VAL SER LYS ARG ILE LEU          
SEQRES   6 A  167  ASP ARG VAL ARG ARG SER ASP VAL VAL ALA ARG TYR GLY          
SEQRES   7 A  167  GLY ASP GLU PHE THR ILE LEU LEU TYR ASP MET LYS GLU          
SEQRES   8 A  167  GLU TYR LEU LYS SER LEU LEU GLU ARG ILE LEU SER THR          
SEQRES   9 A  167  PHE ARG GLU PRO VAL ARG VAL GLU ASN LYS HIS LEU SER          
SEQRES  10 A  167  VAL THR PRO ASN ILE GLY VAL ALA ARG PHE PRO GLU ASP          
SEQRES  11 A  167  GLY GLU ASN LEU GLU GLU LEU LEU LYS VAL ALA ASP MET          
SEQRES  12 A  167  ARG MET TYR LYS ALA LYS GLU MET LYS VAL PRO TYR PHE          
SEQRES  13 A  167  SER LEU SER LEU GLU HIS HIS HIS HIS HIS HIS                  
SEQRES   1 B  167  HIS ASP PRO LEU THR GLY LEU PRO ASN ARG ARG TYR PHE          
SEQRES   2 B  167  PHE GLU LEU GLY ASN ARG TYR LEU ASP LEU ALA LYS ARG          
SEQRES   3 B  167  GLU GLY LYS LYS VAL PHE VAL LEU PHE VAL ASP LEU ALA          
SEQRES   4 B  167  GLY PHE LYS ALA ILE ASN ASP THR TYR GLY HIS LEU SER          
SEQRES   5 B  167  GLY ASP GLU VAL LEU LYS THR VAL SER LYS ARG ILE LEU          
SEQRES   6 B  167  ASP ARG VAL ARG ARG SER ASP VAL VAL ALA ARG TYR GLY          
SEQRES   7 B  167  GLY ASP GLU PHE THR ILE LEU LEU TYR ASP MET LYS GLU          
SEQRES   8 B  167  GLU TYR LEU LYS SER LEU LEU GLU ARG ILE LEU SER THR          
SEQRES   9 B  167  PHE ARG GLU PRO VAL ARG VAL GLU ASN LYS HIS LEU SER          
SEQRES  10 B  167  VAL THR PRO ASN ILE GLY VAL ALA ARG PHE PRO GLU ASP          
SEQRES  11 B  167  GLY GLU ASN LEU GLU GLU LEU LEU LYS VAL ALA ASP MET          
SEQRES  12 B  167  ARG MET TYR LYS ALA LYS GLU MET LYS VAL PRO TYR PHE          
SEQRES  13 B  167  SER LEU SER LEU GLU HIS HIS HIS HIS HIS HIS                  
HET    C2E  A1240      46                                                       
HET    C2E  A1241      46                                                       
HETNAM     C2E 9,9'-[(2R,3R,3AS,5S,7AR,9R,10R,10AS,12S,14AR)-3,5,10,            
HETNAM   2 C2E  12-TETRAHYDROXY-5,12-DIOXIDOOCTAHYDRO-2H,7H-DIFURO[3,           
HETNAM   3 C2E  2-D:3',2'-J][1,3,7,9,2,                                         
HETNAM   4 C2E  8]TETRAOXADIPHOSPHACYCLODODECINE-2,9-DIYL]BIS(2-AMINO-          
HETNAM   5 C2E  1,9-DIHYDRO-6H-PURIN-6-ONE)                                     
HETSYN     C2E C-DI-GMP; CYCLIC DIGUANOSINE MONOPHOSPHATE                       
FORMUL   3  C2E    2(C20 H24 N10 O14 P2)                                        
FORMUL   5  HOH   *144(H2 O)                                                    
HELIX    1   1 ASN A   98  GLY A  117  1                                  20    
HELIX    2   2 GLY A  129  GLY A  138  1                                  10    
HELIX    3   3 GLY A  138  ASP A  155  1                                  18    
HELIX    4   4 LYS A  179  GLU A  196  1                                  18    
HELIX    5   5 ASN A  222  LYS A  238  1                                  17    
HELIX    6   6 ASN B   98  GLY B  117  1                                  20    
HELIX    7   7 GLY B  129  GLY B  138  1                                  10    
HELIX    8   8 GLY B  138  ASP B  155  1                                  18    
HELIX    9   9 LYS B  179  GLU B  196  1                                  18    
HELIX   10  10 ASN B  222  MET B  240  1                                  19    
SHEET    1  AA 4 VAL A 162  GLY A 167  0                                        
SHEET    2  AA 4 GLU A 170  TYR A 176 -1  O  GLU A 170   N  TYR A 166           
SHEET    3  AA 4 VAL A 120  ALA A 128 -1  O  PHE A 121   N  LEU A 175           
SHEET    4  AA 4 THR A 208  PHE A 216 -1  O  THR A 208   N  ALA A 128           
SHEET    1  AB 2 VAL A 198  VAL A 200  0                                        
SHEET    2  AB 2 LYS A 203  LEU A 205 -1  O  LYS A 203   N  VAL A 200           
SHEET    1  BA 5 VAL B 162  ARG B 165  0                                        
SHEET    2  BA 5 GLU B 170  TYR B 176 -1  O  THR B 172   N  ALA B 164           
SHEET    3  BA 5 VAL B 120  ALA B 128 -1  O  PHE B 121   N  LEU B 175           
SHEET    4  BA 5 THR B 208  PHE B 216 -1  O  THR B 208   N  ALA B 128           
SHEET    5  BA 5 TYR B 244  PHE B 245  1  O  PHE B 245   N  VAL B 213           
SHEET    1  BB 2 VAL B 198  VAL B 200  0                                        
SHEET    2  BB 2 LYS B 203  LEU B 205 -1  O  LYS B 203   N  VAL B 200           
CISPEP   1 PHE A  216    PRO A  217          0         7.02                     
CISPEP   2 PHE B  216    PRO B  217          0         5.53                     
SITE     1 AC1 22 ARG A 158  ASP A 161  TYR A 176  TYR A 182                    
SITE     2 AC1 22 LEU A 186  ARG A 189  C2E A1241  HOH A2038                    
SITE     3 AC1 22 HOH A2040  HOH A2054  HOH A2060  HOH A2084                    
SITE     4 AC1 22 HOH A2085  HOH A2086  HOH A2087  ARG B 115                    
SITE     5 AC1 22 ASP B 155  ARG B 156  VAL B 157  ARG B 158                    
SITE     6 AC1 22 ARG B 189  HOH B2020                                          
SITE     1 AC2 20 LYS A 114  ARG A 115  ASP A 155  ARG A 156                    
SITE     2 AC2 20 VAL A 157  ARG A 158  ARG A 159  ARG A 189                    
SITE     3 AC2 20 C2E A1240  HOH A2041  HOH A2042  HOH A2063                    
SITE     4 AC2 20 HOH A2089  HOH A2091  HOH A2092  ARG B 115                    
SITE     5 AC2 20 ARG B 158  TYR B 182  HOH B2026  HOH B2037                    
CRYST1  108.890   52.120   73.710  90.00 124.05  90.00 C 1 2 1       8          
ORIGX1      1.000000  0.000000  0.000000        0.00000                         
ORIGX2      0.000000  1.000000  0.000000        0.00000                         
ORIGX3      0.000000  0.000000  1.000000        0.00000                         
SCALE1      0.009184  0.000000  0.006206        0.00000                         
SCALE2      0.000000  0.019186  0.000000        0.00000                         
SCALE3      0.000000  0.000000  0.016374        0.00000                         
MTRIX1   1 -0.936320  0.209370  0.281920        1.72200    1                    
MTRIX2   1 -0.224790 -0.974130 -0.023140       -9.02798    1                    
MTRIX3   1  0.269780 -0.085040  0.959160        6.06506    1