data_4UUO # _entry.id 4UUO # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.391 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4UUO pdb_00004uuo 10.2210/pdb4uuo/pdb PDBE EBI-61315 ? ? WWPDB D_1290061315 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2015-08-12 2 'Structure model' 1 1 2015-09-23 3 'Structure model' 1 2 2016-03-02 4 'Structure model' 1 3 2016-07-06 5 'Structure model' 1 4 2024-05-01 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Derived calculations' 3 2 'Structure model' 'Refinement description' 4 3 'Structure model' 'Database references' 5 4 'Structure model' 'Database references' 6 5 'Structure model' 'Data collection' 7 5 'Structure model' 'Database references' 8 5 'Structure model' Other 9 5 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 5 'Structure model' chem_comp_atom 2 5 'Structure model' chem_comp_bond 3 5 'Structure model' database_2 4 5 'Structure model' pdbx_database_status 5 5 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 5 'Structure model' '_database_2.pdbx_DOI' 2 5 'Structure model' '_database_2.pdbx_database_accession' 3 5 'Structure model' '_pdbx_database_status.status_code_sf' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4UUO _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.SG_entry . _pdbx_database_status.recvd_initial_deposition_date 2014-07-29 _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.content_type _pdbx_database_related.details PDB 4UUL unspecified 'APO TRICHOMONAS VAGINALIS LACTATE DEHYDROGENASE L91R' PDB 4UUM unspecified 'APO TRICHOMONAS VAGINALIS LACTATE DEHYDROGENASE' PDB 4UUN unspecified 'TRICHOMONAS VAGINALIS LACATATE DEHYDROGENASE IN COMPLEX WITH NADH' PDB 4UUP unspecified 'RECONSTRUCTED ANCESTRAL TRICHOMONAD MALATE DEHYDROGENASE IN COMPLEX WITH NADH, SO4, AND PO4' # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Steindel, P.A.' 1 'Chen, E.H.' 2 'Theobald, D.L.' 3 # _citation.id primary _citation.title 'Gradual Neofunctionalization in the Convergent Evolution of Trichomonad Lactate and Malate Dehydrogenases.' _citation.journal_abbrev 'Protein Sci.' _citation.journal_volume 25 _citation.page_first 1319 _citation.page_last ? _citation.year 2016 _citation.journal_id_ASTM PRCIEI _citation.country US _citation.journal_id_ISSN 0961-8368 _citation.journal_id_CSD 0795 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 26889885 _citation.pdbx_database_id_DOI 10.1002/PRO.2904 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Steindel, P.A.' 1 ? primary 'Chen, E.H.' 2 ? primary 'Wirth, J.D.' 3 ? primary 'Theobald, D.L.' 4 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'CYTOSOLIC MALATE DEHYDROGENASE' 36835.340 1 1.1.1.37 ? ? ? 2 water nat water 18.015 19 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'MALATE DEHYDROGENASE' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MEPIHILITGAAGQIGYALTFRIAKGDLCGDRKVVLHLLEIPFGMKALEGCVMELQDCAFPNVAGIVWTDKVEEAFKGVD VAFLVGSFPRKDGMDRSDLLAKNGGIFTVQGKALNDYAKPTVKVLVVGNPANTNCLIAQASAPKLQNKNWCAMTRLDHNR MVGALAAKFGVTPEKIHKVCIWGNHSNTQVPDTTHATVDLPEGTVKVADKLPKEYLEGEFAQMIATRGGAVIKMRGASSA ASAANAALTCVKDWLYGTAEGDFVSMAIPVPDNEPYGIKQGTIFSFPVTVSKDGEVHVVEGLELNDWVKGRLEATEKELI GEKETAWKVLGLLEHHHHHH ; _entity_poly.pdbx_seq_one_letter_code_can ;MEPIHILITGAAGQIGYALTFRIAKGDLCGDRKVVLHLLEIPFGMKALEGCVMELQDCAFPNVAGIVWTDKVEEAFKGVD VAFLVGSFPRKDGMDRSDLLAKNGGIFTVQGKALNDYAKPTVKVLVVGNPANTNCLIAQASAPKLQNKNWCAMTRLDHNR MVGALAAKFGVTPEKIHKVCIWGNHSNTQVPDTTHATVDLPEGTVKVADKLPKEYLEGEFAQMIATRGGAVIKMRGASSA ASAANAALTCVKDWLYGTAEGDFVSMAIPVPDNEPYGIKQGTIFSFPVTVSKDGEVHVVEGLELNDWVKGRLEATEKELI GEKETAWKVLGLLEHHHHHH ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 GLU n 1 3 PRO n 1 4 ILE n 1 5 HIS n 1 6 ILE n 1 7 LEU n 1 8 ILE n 1 9 THR n 1 10 GLY n 1 11 ALA n 1 12 ALA n 1 13 GLY n 1 14 GLN n 1 15 ILE n 1 16 GLY n 1 17 TYR n 1 18 ALA n 1 19 LEU n 1 20 THR n 1 21 PHE n 1 22 ARG n 1 23 ILE n 1 24 ALA n 1 25 LYS n 1 26 GLY n 1 27 ASP n 1 28 LEU n 1 29 CYS n 1 30 GLY n 1 31 ASP n 1 32 ARG n 1 33 LYS n 1 34 VAL n 1 35 VAL n 1 36 LEU n 1 37 HIS n 1 38 LEU n 1 39 LEU n 1 40 GLU n 1 41 ILE n 1 42 PRO n 1 43 PHE n 1 44 GLY n 1 45 MET n 1 46 LYS n 1 47 ALA n 1 48 LEU n 1 49 GLU n 1 50 GLY n 1 51 CYS n 1 52 VAL n 1 53 MET n 1 54 GLU n 1 55 LEU n 1 56 GLN n 1 57 ASP n 1 58 CYS n 1 59 ALA n 1 60 PHE n 1 61 PRO n 1 62 ASN n 1 63 VAL n 1 64 ALA n 1 65 GLY n 1 66 ILE n 1 67 VAL n 1 68 TRP n 1 69 THR n 1 70 ASP n 1 71 LYS n 1 72 VAL n 1 73 GLU n 1 74 GLU n 1 75 ALA n 1 76 PHE n 1 77 LYS n 1 78 GLY n 1 79 VAL n 1 80 ASP n 1 81 VAL n 1 82 ALA n 1 83 PHE n 1 84 LEU n 1 85 VAL n 1 86 GLY n 1 87 SER n 1 88 PHE n 1 89 PRO n 1 90 ARG n 1 91 LYS n 1 92 ASP n 1 93 GLY n 1 94 MET n 1 95 ASP n 1 96 ARG n 1 97 SER n 1 98 ASP n 1 99 LEU n 1 100 LEU n 1 101 ALA n 1 102 LYS n 1 103 ASN n 1 104 GLY n 1 105 GLY n 1 106 ILE n 1 107 PHE n 1 108 THR n 1 109 VAL n 1 110 GLN n 1 111 GLY n 1 112 LYS n 1 113 ALA n 1 114 LEU n 1 115 ASN n 1 116 ASP n 1 117 TYR n 1 118 ALA n 1 119 LYS n 1 120 PRO n 1 121 THR n 1 122 VAL n 1 123 LYS n 1 124 VAL n 1 125 LEU n 1 126 VAL n 1 127 VAL n 1 128 GLY n 1 129 ASN n 1 130 PRO n 1 131 ALA n 1 132 ASN n 1 133 THR n 1 134 ASN n 1 135 CYS n 1 136 LEU n 1 137 ILE n 1 138 ALA n 1 139 GLN n 1 140 ALA n 1 141 SER n 1 142 ALA n 1 143 PRO n 1 144 LYS n 1 145 LEU n 1 146 GLN n 1 147 ASN n 1 148 LYS n 1 149 ASN n 1 150 TRP n 1 151 CYS n 1 152 ALA n 1 153 MET n 1 154 THR n 1 155 ARG n 1 156 LEU n 1 157 ASP n 1 158 HIS n 1 159 ASN n 1 160 ARG n 1 161 MET n 1 162 VAL n 1 163 GLY n 1 164 ALA n 1 165 LEU n 1 166 ALA n 1 167 ALA n 1 168 LYS n 1 169 PHE n 1 170 GLY n 1 171 VAL n 1 172 THR n 1 173 PRO n 1 174 GLU n 1 175 LYS n 1 176 ILE n 1 177 HIS n 1 178 LYS n 1 179 VAL n 1 180 CYS n 1 181 ILE n 1 182 TRP n 1 183 GLY n 1 184 ASN n 1 185 HIS n 1 186 SER n 1 187 ASN n 1 188 THR n 1 189 GLN n 1 190 VAL n 1 191 PRO n 1 192 ASP n 1 193 THR n 1 194 THR n 1 195 HIS n 1 196 ALA n 1 197 THR n 1 198 VAL n 1 199 ASP n 1 200 LEU n 1 201 PRO n 1 202 GLU n 1 203 GLY n 1 204 THR n 1 205 VAL n 1 206 LYS n 1 207 VAL n 1 208 ALA n 1 209 ASP n 1 210 LYS n 1 211 LEU n 1 212 PRO n 1 213 LYS n 1 214 GLU n 1 215 TYR n 1 216 LEU n 1 217 GLU n 1 218 GLY n 1 219 GLU n 1 220 PHE n 1 221 ALA n 1 222 GLN n 1 223 MET n 1 224 ILE n 1 225 ALA n 1 226 THR n 1 227 ARG n 1 228 GLY n 1 229 GLY n 1 230 ALA n 1 231 VAL n 1 232 ILE n 1 233 LYS n 1 234 MET n 1 235 ARG n 1 236 GLY n 1 237 ALA n 1 238 SER n 1 239 SER n 1 240 ALA n 1 241 ALA n 1 242 SER n 1 243 ALA n 1 244 ALA n 1 245 ASN n 1 246 ALA n 1 247 ALA n 1 248 LEU n 1 249 THR n 1 250 CYS n 1 251 VAL n 1 252 LYS n 1 253 ASP n 1 254 TRP n 1 255 LEU n 1 256 TYR n 1 257 GLY n 1 258 THR n 1 259 ALA n 1 260 GLU n 1 261 GLY n 1 262 ASP n 1 263 PHE n 1 264 VAL n 1 265 SER n 1 266 MET n 1 267 ALA n 1 268 ILE n 1 269 PRO n 1 270 VAL n 1 271 PRO n 1 272 ASP n 1 273 ASN n 1 274 GLU n 1 275 PRO n 1 276 TYR n 1 277 GLY n 1 278 ILE n 1 279 LYS n 1 280 GLN n 1 281 GLY n 1 282 THR n 1 283 ILE n 1 284 PHE n 1 285 SER n 1 286 PHE n 1 287 PRO n 1 288 VAL n 1 289 THR n 1 290 VAL n 1 291 SER n 1 292 LYS n 1 293 ASP n 1 294 GLY n 1 295 GLU n 1 296 VAL n 1 297 HIS n 1 298 VAL n 1 299 VAL n 1 300 GLU n 1 301 GLY n 1 302 LEU n 1 303 GLU n 1 304 LEU n 1 305 ASN n 1 306 ASP n 1 307 TRP n 1 308 VAL n 1 309 LYS n 1 310 GLY n 1 311 ARG n 1 312 LEU n 1 313 GLU n 1 314 ALA n 1 315 THR n 1 316 GLU n 1 317 LYS n 1 318 GLU n 1 319 LEU n 1 320 ILE n 1 321 GLY n 1 322 GLU n 1 323 LYS n 1 324 GLU n 1 325 THR n 1 326 ALA n 1 327 TRP n 1 328 LYS n 1 329 VAL n 1 330 LEU n 1 331 GLY n 1 332 LEU n 1 333 LEU n 1 334 GLU n 1 335 HIS n 1 336 HIS n 1 337 HIS n 1 338 HIS n 1 339 HIS n 1 340 HIS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'TRICHOMONAS VAGINALIS' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 5722 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'ESCHERICHIA COLI' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name PET-21B _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 ? ? ? A . n A 1 2 GLU 2 2 2 GLU GLU A . n A 1 3 PRO 3 3 3 PRO PRO A . n A 1 4 ILE 4 4 4 ILE ILE A . n A 1 5 HIS 5 5 5 HIS HIS A . n A 1 6 ILE 6 6 6 ILE ILE A . n A 1 7 LEU 7 7 7 LEU LEU A . n A 1 8 ILE 8 8 8 ILE ILE A . n A 1 9 THR 9 9 9 THR THR A . n A 1 10 GLY 10 10 10 GLY GLY A . n A 1 11 ALA 11 11 11 ALA ALA A . n A 1 12 ALA 12 12 12 ALA ALA A . n A 1 13 GLY 13 13 13 GLY GLY A . n A 1 14 GLN 14 14 14 GLN GLN A . n A 1 15 ILE 15 15 15 ILE ILE A . n A 1 16 GLY 16 16 16 GLY GLY A . n A 1 17 TYR 17 17 17 TYR TYR A . n A 1 18 ALA 18 18 18 ALA ALA A . n A 1 19 LEU 19 19 19 LEU LEU A . n A 1 20 THR 20 20 20 THR THR A . n A 1 21 PHE 21 21 21 PHE PHE A . n A 1 22 ARG 22 22 22 ARG ARG A . n A 1 23 ILE 23 23 23 ILE ILE A . n A 1 24 ALA 24 24 24 ALA ALA A . n A 1 25 LYS 25 25 25 LYS LYS A . n A 1 26 GLY 26 26 26 GLY GLY A . n A 1 27 ASP 27 27 27 ASP ASP A . n A 1 28 LEU 28 28 28 LEU LEU A . n A 1 29 CYS 29 29 29 CYS CYS A . n A 1 30 GLY 30 30 30 GLY GLY A . n A 1 31 ASP 31 31 31 ASP ASP A . n A 1 32 ARG 32 32 32 ARG ARG A . n A 1 33 LYS 33 33 33 LYS LYS A . n A 1 34 VAL 34 34 34 VAL VAL A . n A 1 35 VAL 35 35 35 VAL VAL A . n A 1 36 LEU 36 36 36 LEU LEU A . n A 1 37 HIS 37 37 37 HIS HIS A . n A 1 38 LEU 38 38 38 LEU LEU A . n A 1 39 LEU 39 39 39 LEU LEU A . n A 1 40 GLU 40 40 40 GLU GLU A . n A 1 41 ILE 41 41 41 ILE ILE A . n A 1 42 PRO 42 42 42 PRO PRO A . n A 1 43 PHE 43 43 43 PHE PHE A . n A 1 44 GLY 44 44 44 GLY GLY A . n A 1 45 MET 45 45 45 MET MET A . n A 1 46 LYS 46 46 46 LYS LYS A . n A 1 47 ALA 47 47 47 ALA ALA A . n A 1 48 LEU 48 48 48 LEU LEU A . n A 1 49 GLU 49 49 49 GLU GLU A . n A 1 50 GLY 50 50 50 GLY GLY A . n A 1 51 CYS 51 51 51 CYS CYS A . n A 1 52 VAL 52 52 52 VAL VAL A . n A 1 53 MET 53 53 53 MET MET A . n A 1 54 GLU 54 54 54 GLU GLU A . n A 1 55 LEU 55 55 55 LEU LEU A . n A 1 56 GLN 56 56 56 GLN GLN A . n A 1 57 ASP 57 57 57 ASP ASP A . n A 1 58 CYS 58 58 58 CYS CYS A . n A 1 59 ALA 59 59 59 ALA ALA A . n A 1 60 PHE 60 60 60 PHE PHE A . n A 1 61 PRO 61 61 61 PRO PRO A . n A 1 62 ASN 62 62 62 ASN ASN A . n A 1 63 VAL 63 63 63 VAL VAL A . n A 1 64 ALA 64 64 64 ALA ALA A . n A 1 65 GLY 65 65 65 GLY GLY A . n A 1 66 ILE 66 66 66 ILE ILE A . n A 1 67 VAL 67 67 67 VAL VAL A . n A 1 68 TRP 68 68 68 TRP TRP A . n A 1 69 THR 69 69 69 THR THR A . n A 1 70 ASP 70 70 70 ASP ASP A . n A 1 71 LYS 71 71 71 LYS LYS A . n A 1 72 VAL 72 72 72 VAL VAL A . n A 1 73 GLU 73 73 73 GLU GLU A . n A 1 74 GLU 74 74 74 GLU GLU A . n A 1 75 ALA 75 75 75 ALA ALA A . n A 1 76 PHE 76 76 76 PHE PHE A . n A 1 77 LYS 77 77 77 LYS LYS A . n A 1 78 GLY 78 78 78 GLY GLY A . n A 1 79 VAL 79 79 79 VAL VAL A . n A 1 80 ASP 80 80 80 ASP ASP A . n A 1 81 VAL 81 81 81 VAL VAL A . n A 1 82 ALA 82 82 82 ALA ALA A . n A 1 83 PHE 83 83 83 PHE PHE A . n A 1 84 LEU 84 84 84 LEU LEU A . n A 1 85 VAL 85 85 85 VAL VAL A . n A 1 86 GLY 86 86 86 GLY GLY A . n A 1 87 SER 87 87 87 SER SER A . n A 1 88 PHE 88 88 88 PHE PHE A . n A 1 89 PRO 89 89 89 PRO PRO A . n A 1 90 ARG 90 90 90 ARG ARG A . n A 1 91 LYS 91 91 91 LYS LYS A . n A 1 92 ASP 92 92 92 ASP ASP A . n A 1 93 GLY 93 93 93 GLY GLY A . n A 1 94 MET 94 94 94 MET MET A . n A 1 95 ASP 95 95 95 ASP ASP A . n A 1 96 ARG 96 96 96 ARG ARG A . n A 1 97 SER 97 97 97 SER SER A . n A 1 98 ASP 98 98 98 ASP ASP A . n A 1 99 LEU 99 99 99 LEU LEU A . n A 1 100 LEU 100 100 100 LEU LEU A . n A 1 101 ALA 101 101 101 ALA ALA A . n A 1 102 LYS 102 102 102 LYS LYS A . n A 1 103 ASN 103 103 103 ASN ASN A . n A 1 104 GLY 104 104 104 GLY GLY A . n A 1 105 GLY 105 105 105 GLY GLY A . n A 1 106 ILE 106 106 106 ILE ILE A . n A 1 107 PHE 107 107 107 PHE PHE A . n A 1 108 THR 108 108 108 THR THR A . n A 1 109 VAL 109 109 109 VAL VAL A . n A 1 110 GLN 110 110 110 GLN GLN A . n A 1 111 GLY 111 111 111 GLY GLY A . n A 1 112 LYS 112 112 112 LYS LYS A . n A 1 113 ALA 113 113 113 ALA ALA A . n A 1 114 LEU 114 114 114 LEU LEU A . n A 1 115 ASN 115 115 115 ASN ASN A . n A 1 116 ASP 116 116 116 ASP ASP A . n A 1 117 TYR 117 117 117 TYR TYR A . n A 1 118 ALA 118 118 118 ALA ALA A . n A 1 119 LYS 119 119 119 LYS LYS A . n A 1 120 PRO 120 120 120 PRO PRO A . n A 1 121 THR 121 121 121 THR THR A . n A 1 122 VAL 122 122 122 VAL VAL A . n A 1 123 LYS 123 123 123 LYS LYS A . n A 1 124 VAL 124 124 124 VAL VAL A . n A 1 125 LEU 125 125 125 LEU LEU A . n A 1 126 VAL 126 126 126 VAL VAL A . n A 1 127 VAL 127 127 127 VAL VAL A . n A 1 128 GLY 128 128 128 GLY GLY A . n A 1 129 ASN 129 129 129 ASN ASN A . n A 1 130 PRO 130 130 130 PRO PRO A . n A 1 131 ALA 131 131 131 ALA ALA A . n A 1 132 ASN 132 132 132 ASN ASN A . n A 1 133 THR 133 133 133 THR THR A . n A 1 134 ASN 134 134 134 ASN ASN A . n A 1 135 CYS 135 135 135 CYS CYS A . n A 1 136 LEU 136 136 136 LEU LEU A . n A 1 137 ILE 137 137 137 ILE ILE A . n A 1 138 ALA 138 138 138 ALA ALA A . n A 1 139 GLN 139 139 139 GLN GLN A . n A 1 140 ALA 140 140 140 ALA ALA A . n A 1 141 SER 141 141 141 SER SER A . n A 1 142 ALA 142 142 142 ALA ALA A . n A 1 143 PRO 143 143 143 PRO PRO A . n A 1 144 LYS 144 144 144 LYS LYS A . n A 1 145 LEU 145 145 145 LEU LEU A . n A 1 146 GLN 146 146 146 GLN GLN A . n A 1 147 ASN 147 147 147 ASN ASN A . n A 1 148 LYS 148 148 148 LYS LYS A . n A 1 149 ASN 149 149 149 ASN ASN A . n A 1 150 TRP 150 150 150 TRP TRP A . n A 1 151 CYS 151 151 151 CYS CYS A . n A 1 152 ALA 152 152 152 ALA ALA A . n A 1 153 MET 153 153 153 MET MET A . n A 1 154 THR 154 154 154 THR THR A . n A 1 155 ARG 155 155 155 ARG ARG A . n A 1 156 LEU 156 156 156 LEU LEU A . n A 1 157 ASP 157 157 157 ASP ASP A . n A 1 158 HIS 158 158 158 HIS HIS A . n A 1 159 ASN 159 159 159 ASN ASN A . n A 1 160 ARG 160 160 160 ARG ARG A . n A 1 161 MET 161 161 161 MET MET A . n A 1 162 VAL 162 162 162 VAL VAL A . n A 1 163 GLY 163 163 163 GLY GLY A . n A 1 164 ALA 164 164 164 ALA ALA A . n A 1 165 LEU 165 165 165 LEU LEU A . n A 1 166 ALA 166 166 166 ALA ALA A . n A 1 167 ALA 167 167 167 ALA ALA A . n A 1 168 LYS 168 168 168 LYS LYS A . n A 1 169 PHE 169 169 169 PHE PHE A . n A 1 170 GLY 170 170 170 GLY GLY A . n A 1 171 VAL 171 171 171 VAL VAL A . n A 1 172 THR 172 172 172 THR THR A . n A 1 173 PRO 173 173 173 PRO PRO A . n A 1 174 GLU 174 174 174 GLU GLU A . n A 1 175 LYS 175 175 175 LYS LYS A . n A 1 176 ILE 176 176 176 ILE ILE A . n A 1 177 HIS 177 177 177 HIS HIS A . n A 1 178 LYS 178 178 178 LYS LYS A . n A 1 179 VAL 179 179 179 VAL VAL A . n A 1 180 CYS 180 180 180 CYS CYS A . n A 1 181 ILE 181 181 181 ILE ILE A . n A 1 182 TRP 182 182 182 TRP TRP A . n A 1 183 GLY 183 183 183 GLY GLY A . n A 1 184 ASN 184 184 184 ASN ASN A . n A 1 185 HIS 185 185 185 HIS HIS A . n A 1 186 SER 186 186 186 SER SER A . n A 1 187 ASN 187 187 187 ASN ASN A . n A 1 188 THR 188 188 188 THR THR A . n A 1 189 GLN 189 189 189 GLN GLN A . n A 1 190 VAL 190 190 190 VAL VAL A . n A 1 191 PRO 191 191 191 PRO PRO A . n A 1 192 ASP 192 192 192 ASP ASP A . n A 1 193 THR 193 193 193 THR THR A . n A 1 194 THR 194 194 194 THR THR A . n A 1 195 HIS 195 195 195 HIS HIS A . n A 1 196 ALA 196 196 196 ALA ALA A . n A 1 197 THR 197 197 197 THR THR A . n A 1 198 VAL 198 198 198 VAL VAL A . n A 1 199 ASP 199 199 199 ASP ASP A . n A 1 200 LEU 200 200 ? ? ? A . n A 1 201 PRO 201 201 ? ? ? A . n A 1 202 GLU 202 202 ? ? ? A . n A 1 203 GLY 203 203 ? ? ? A . n A 1 204 THR 204 204 204 THR THR A . n A 1 205 VAL 205 205 205 VAL VAL A . n A 1 206 LYS 206 206 206 LYS LYS A . n A 1 207 VAL 207 207 207 VAL VAL A . n A 1 208 ALA 208 208 208 ALA ALA A . n A 1 209 ASP 209 209 209 ASP ASP A . n A 1 210 LYS 210 210 210 LYS LYS A . n A 1 211 LEU 211 211 211 LEU LEU A . n A 1 212 PRO 212 212 212 PRO PRO A . n A 1 213 LYS 213 213 213 LYS LYS A . n A 1 214 GLU 214 214 214 GLU GLU A . n A 1 215 TYR 215 215 215 TYR TYR A . n A 1 216 LEU 216 216 216 LEU LEU A . n A 1 217 GLU 217 217 217 GLU GLU A . n A 1 218 GLY 218 218 218 GLY GLY A . n A 1 219 GLU 219 219 219 GLU GLU A . n A 1 220 PHE 220 220 220 PHE PHE A . n A 1 221 ALA 221 221 221 ALA ALA A . n A 1 222 GLN 222 222 222 GLN GLN A . n A 1 223 MET 223 223 223 MET MET A . n A 1 224 ILE 224 224 224 ILE ILE A . n A 1 225 ALA 225 225 225 ALA ALA A . n A 1 226 THR 226 226 226 THR THR A . n A 1 227 ARG 227 227 227 ARG ARG A . n A 1 228 GLY 228 228 228 GLY GLY A . n A 1 229 GLY 229 229 229 GLY GLY A . n A 1 230 ALA 230 230 230 ALA ALA A . n A 1 231 VAL 231 231 231 VAL VAL A . n A 1 232 ILE 232 232 232 ILE ILE A . n A 1 233 LYS 233 233 233 LYS LYS A . n A 1 234 MET 234 234 234 MET MET A . n A 1 235 ARG 235 235 235 ARG ARG A . n A 1 236 GLY 236 236 236 GLY GLY A . n A 1 237 ALA 237 237 237 ALA ALA A . n A 1 238 SER 238 238 238 SER SER A . n A 1 239 SER 239 239 239 SER SER A . n A 1 240 ALA 240 240 240 ALA ALA A . n A 1 241 ALA 241 241 241 ALA ALA A . n A 1 242 SER 242 242 242 SER SER A . n A 1 243 ALA 243 243 243 ALA ALA A . n A 1 244 ALA 244 244 244 ALA ALA A . n A 1 245 ASN 245 245 245 ASN ASN A . n A 1 246 ALA 246 246 246 ALA ALA A . n A 1 247 ALA 247 247 247 ALA ALA A . n A 1 248 LEU 248 248 248 LEU LEU A . n A 1 249 THR 249 249 249 THR THR A . n A 1 250 CYS 250 250 250 CYS CYS A . n A 1 251 VAL 251 251 251 VAL VAL A . n A 1 252 LYS 252 252 252 LYS LYS A . n A 1 253 ASP 253 253 253 ASP ASP A . n A 1 254 TRP 254 254 254 TRP TRP A . n A 1 255 LEU 255 255 255 LEU LEU A . n A 1 256 TYR 256 256 256 TYR TYR A . n A 1 257 GLY 257 257 257 GLY GLY A . n A 1 258 THR 258 258 258 THR THR A . n A 1 259 ALA 259 259 ? ? ? A . n A 1 260 GLU 260 260 ? ? ? A . n A 1 261 GLY 261 261 ? ? ? A . n A 1 262 ASP 262 262 262 ASP ASP A . n A 1 263 PHE 263 263 263 PHE PHE A . n A 1 264 VAL 264 264 264 VAL VAL A . n A 1 265 SER 265 265 265 SER SER A . n A 1 266 MET 266 266 266 MET MET A . n A 1 267 ALA 267 267 267 ALA ALA A . n A 1 268 ILE 268 268 268 ILE ILE A . n A 1 269 PRO 269 269 269 PRO PRO A . n A 1 270 VAL 270 270 270 VAL VAL A . n A 1 271 PRO 271 271 271 PRO PRO A . n A 1 272 ASP 272 272 272 ASP ASP A . n A 1 273 ASN 273 273 273 ASN ASN A . n A 1 274 GLU 274 274 274 GLU GLU A . n A 1 275 PRO 275 275 275 PRO PRO A . n A 1 276 TYR 276 276 276 TYR TYR A . n A 1 277 GLY 277 277 277 GLY GLY A . n A 1 278 ILE 278 278 278 ILE ILE A . n A 1 279 LYS 279 279 279 LYS LYS A . n A 1 280 GLN 280 280 280 GLN GLN A . n A 1 281 GLY 281 281 281 GLY GLY A . n A 1 282 THR 282 282 282 THR THR A . n A 1 283 ILE 283 283 283 ILE ILE A . n A 1 284 PHE 284 284 284 PHE PHE A . n A 1 285 SER 285 285 285 SER SER A . n A 1 286 PHE 286 286 286 PHE PHE A . n A 1 287 PRO 287 287 287 PRO PRO A . n A 1 288 VAL 288 288 288 VAL VAL A . n A 1 289 THR 289 289 289 THR THR A . n A 1 290 VAL 290 290 290 VAL VAL A . n A 1 291 SER 291 291 291 SER SER A . n A 1 292 LYS 292 292 292 LYS LYS A . n A 1 293 ASP 293 293 293 ASP ASP A . n A 1 294 GLY 294 294 294 GLY GLY A . n A 1 295 GLU 295 295 295 GLU GLU A . n A 1 296 VAL 296 296 296 VAL VAL A . n A 1 297 HIS 297 297 297 HIS HIS A . n A 1 298 VAL 298 298 298 VAL VAL A . n A 1 299 VAL 299 299 299 VAL VAL A . n A 1 300 GLU 300 300 300 GLU GLU A . n A 1 301 GLY 301 301 301 GLY GLY A . n A 1 302 LEU 302 302 302 LEU LEU A . n A 1 303 GLU 303 303 303 GLU GLU A . n A 1 304 LEU 304 304 304 LEU LEU A . n A 1 305 ASN 305 305 305 ASN ASN A . n A 1 306 ASP 306 306 306 ASP ASP A . n A 1 307 TRP 307 307 307 TRP TRP A . n A 1 308 VAL 308 308 308 VAL VAL A . n A 1 309 LYS 309 309 309 LYS LYS A . n A 1 310 GLY 310 310 310 GLY GLY A . n A 1 311 ARG 311 311 311 ARG ARG A . n A 1 312 LEU 312 312 312 LEU LEU A . n A 1 313 GLU 313 313 313 GLU GLU A . n A 1 314 ALA 314 314 314 ALA ALA A . n A 1 315 THR 315 315 315 THR THR A . n A 1 316 GLU 316 316 316 GLU GLU A . n A 1 317 LYS 317 317 317 LYS LYS A . n A 1 318 GLU 318 318 318 GLU GLU A . n A 1 319 LEU 319 319 319 LEU LEU A . n A 1 320 ILE 320 320 320 ILE ILE A . n A 1 321 GLY 321 321 321 GLY GLY A . n A 1 322 GLU 322 322 322 GLU GLU A . n A 1 323 LYS 323 323 323 LYS LYS A . n A 1 324 GLU 324 324 324 GLU GLU A . n A 1 325 THR 325 325 325 THR THR A . n A 1 326 ALA 326 326 326 ALA ALA A . n A 1 327 TRP 327 327 327 TRP TRP A . n A 1 328 LYS 328 328 328 LYS LYS A . n A 1 329 VAL 329 329 329 VAL VAL A . n A 1 330 LEU 330 330 330 LEU LEU A . n A 1 331 GLY 331 331 331 GLY GLY A . n A 1 332 LEU 332 332 332 LEU LEU A . n A 1 333 LEU 333 333 333 LEU LEU A . n A 1 334 GLU 334 334 334 GLU GLU A . n A 1 335 HIS 335 335 335 HIS HIS A . n A 1 336 HIS 336 336 336 HIS HIS A . n A 1 337 HIS 337 337 ? ? ? A . n A 1 338 HIS 338 338 ? ? ? A . n A 1 339 HIS 339 339 ? ? ? A . n A 1 340 HIS 340 340 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HOH 1 2001 2001 HOH HOH A . B 2 HOH 2 2002 2002 HOH HOH A . B 2 HOH 3 2003 2003 HOH HOH A . B 2 HOH 4 2004 2004 HOH HOH A . B 2 HOH 5 2005 2005 HOH HOH A . B 2 HOH 6 2006 2006 HOH HOH A . B 2 HOH 7 2007 2007 HOH HOH A . B 2 HOH 8 2008 2008 HOH HOH A . B 2 HOH 9 2009 2009 HOH HOH A . B 2 HOH 10 2010 2010 HOH HOH A . B 2 HOH 11 2011 2011 HOH HOH A . B 2 HOH 12 2012 2012 HOH HOH A . B 2 HOH 13 2013 2013 HOH HOH A . B 2 HOH 14 2014 2014 HOH HOH A . B 2 HOH 15 2015 2015 HOH HOH A . B 2 HOH 16 2016 2016 HOH HOH A . B 2 HOH 17 2017 2017 HOH HOH A . B 2 HOH 18 2018 2018 HOH HOH A . B 2 HOH 19 2019 2019 HOH HOH A . # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal PHENIX refinement '(PHENIX.REFINE)' ? 1 XDS 'data reduction' . ? 2 XSCALE 'data scaling' . ? 3 PHENIX phasing . ? 4 # _cell.entry_id 4UUO _cell.length_a 155.000 _cell.length_b 155.000 _cell.length_c 155.000 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4UUO _symmetry.space_group_name_H-M 'I 21 3' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 199 # _exptl.entry_id 4UUO _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 4.06 _exptl_crystal.density_percent_sol 69.7 _exptl_crystal.description NONE # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details '8.3 MG/ML PROTEIN, 4.0 M SODIUM FORMATE' # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC CCD' _diffrn_detector.pdbx_collection_date 2012-09-12 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.12 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ALS BEAMLINE 12.3.1' _diffrn_source.pdbx_synchrotron_site ALS _diffrn_source.pdbx_synchrotron_beamline 12.3.1 _diffrn_source.pdbx_wavelength 1.12 _diffrn_source.pdbx_wavelength_list ? # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 4UUO _reflns.observed_criterion_sigma_I 0.25 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 49.00 _reflns.d_resolution_high 2.84 _reflns.number_obs 19501 _reflns.number_all ? _reflns.percent_possible_obs 99.5 _reflns.pdbx_Rmerge_I_obs 0.188 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 27.83 _reflns.B_iso_Wilson_estimate 91.74 _reflns.pdbx_redundancy 41.7 # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 2.84 _reflns_shell.d_res_low 2.92 _reflns_shell.percent_possible_all 98.2 _reflns_shell.Rmerge_I_obs 1.5 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 1.25 _reflns_shell.pdbx_redundancy ? # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 4UUO _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 14688 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.34 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 49.015 _refine.ls_d_res_high 2.842 _refine.ls_percent_reflns_obs 99.51 _refine.ls_R_factor_obs 0.2088 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.2062 _refine.ls_R_factor_R_free 0.2585 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.06 _refine.ls_number_reflns_R_free 743 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 103.8 _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model 'HOMOLOGY MODEL BASED ON TRICHOMONAS VAGINALIS LDH' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.52 _refine.pdbx_overall_phase_error 35.67 _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2490 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 19 _refine_hist.number_atoms_total 2509 _refine_hist.d_res_high 2.842 _refine_hist.d_res_low 49.015 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function f_bond_d 0.004 ? ? 2555 'X-RAY DIFFRACTION' ? f_angle_d 0.797 ? ? 3465 'X-RAY DIFFRACTION' ? f_dihedral_angle_d 11.440 ? ? 925 'X-RAY DIFFRACTION' ? f_chiral_restr 0.029 ? ? 397 'X-RAY DIFFRACTION' ? f_plane_restr 0.003 ? ? 445 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all 'X-RAY DIFFRACTION' . 2.8422 3.0617 2750 0.3389 99.00 0.4173 . . 147 . . 'X-RAY DIFFRACTION' . 3.0617 3.3697 2767 0.2639 100.00 0.3640 . . 147 . . 'X-RAY DIFFRACTION' . 3.3697 3.8571 2746 0.2060 99.00 0.2416 . . 149 . . 'X-RAY DIFFRACTION' . 3.8571 4.8589 2799 0.1821 100.00 0.2147 . . 146 . . 'X-RAY DIFFRACTION' . 4.8589 49.0226 2883 0.1911 100.00 0.2487 . . 154 . . # _database_PDB_matrix.entry_id 4UUO _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 4UUO _struct.title 'Apo Trichomonas vaginalis malate dehydrogenase' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4UUO _struct_keywords.pdbx_keywords OXIDOREDUCTASE _struct_keywords.text OXIDOREDUCTASE # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q27819_TRIVA _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_db_accession Q27819 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 4UUO _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 332 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q27819 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 332 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 332 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4UUO LEU A 333 ? UNP Q27819 ? ? 'expression tag' 333 1 1 4UUO GLU A 334 ? UNP Q27819 ? ? 'expression tag' 334 2 1 4UUO HIS A 335 ? UNP Q27819 ? ? 'expression tag' 335 3 1 4UUO HIS A 336 ? UNP Q27819 ? ? 'expression tag' 336 4 1 4UUO HIS A 337 ? UNP Q27819 ? ? 'expression tag' 337 5 1 4UUO HIS A 338 ? UNP Q27819 ? ? 'expression tag' 338 6 1 4UUO HIS A 339 ? UNP Q27819 ? ? 'expression tag' 339 7 1 4UUO HIS A 340 ? UNP Q27819 ? ? 'expression tag' 340 8 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 3530 ? 1 MORE -18.2 ? 1 'SSA (A^2)' 26240 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 16_554 x,-y,-z-1/2 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 -77.5000000000 # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLY A 13 ? GLY A 26 ? GLY A 13 GLY A 26 1 ? 14 HELX_P HELX_P2 2 ILE A 41 ? PHE A 43 ? ILE A 41 PHE A 43 5 ? 3 HELX_P HELX_P3 3 GLY A 44 ? ALA A 59 ? GLY A 44 ALA A 59 1 ? 16 HELX_P HELX_P4 4 LYS A 71 ? LYS A 77 ? LYS A 71 LYS A 77 1 ? 7 HELX_P HELX_P5 5 ASP A 95 ? ALA A 118 ? ASP A 95 ALA A 118 1 ? 24 HELX_P HELX_P6 6 PRO A 130 ? ALA A 140 ? PRO A 130 ALA A 140 1 ? 11 HELX_P HELX_P7 7 THR A 154 ? GLY A 170 ? THR A 154 GLY A 170 1 ? 17 HELX_P HELX_P8 8 THR A 172 ? GLU A 174 ? THR A 172 GLU A 174 5 ? 3 HELX_P HELX_P9 9 ALA A 208 ? LYS A 210 ? ALA A 208 LYS A 210 5 ? 3 HELX_P HELX_P10 10 PRO A 212 ? GLU A 217 ? PRO A 212 GLU A 217 1 ? 6 HELX_P HELX_P11 11 GLY A 218 ? GLY A 236 ? GLY A 218 GLY A 236 1 ? 19 HELX_P HELX_P12 12 SER A 239 ? GLY A 257 ? SER A 239 GLY A 257 1 ? 19 HELX_P HELX_P13 13 GLU A 274 ? ILE A 278 ? GLU A 274 ILE A 278 5 ? 5 HELX_P HELX_P14 14 ASN A 305 ? LEU A 330 ? ASN A 305 LEU A 330 1 ? 26 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id ASN _struct_mon_prot_cis.label_seq_id 129 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id ASN _struct_mon_prot_cis.auth_seq_id 129 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 130 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 130 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -5.47 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA ? 6 ? AB ? 3 ? AC ? 2 ? AD ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA 1 2 ? parallel AA 2 3 ? parallel AA 3 4 ? parallel AA 4 5 ? parallel AA 5 6 ? parallel AB 1 2 ? anti-parallel AB 2 3 ? anti-parallel AC 1 2 ? anti-parallel AD 1 2 ? anti-parallel AD 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA 1 VAL A 63 ? THR A 69 ? VAL A 63 THR A 69 AA 2 VAL A 34 ? LEU A 39 ? VAL A 34 LEU A 39 AA 3 ILE A 4 ? ILE A 8 ? ILE A 4 ILE A 8 AA 4 VAL A 81 ? LEU A 84 ? VAL A 81 LEU A 84 AA 5 LYS A 123 ? VAL A 126 ? LYS A 123 VAL A 126 AA 6 TRP A 150 ? ALA A 152 ? TRP A 150 ALA A 152 AB 1 ILE A 176 ? HIS A 177 ? ILE A 176 HIS A 177 AB 2 THR A 197 ? VAL A 198 ? THR A 197 VAL A 198 AB 3 VAL A 205 ? LYS A 206 ? VAL A 205 LYS A 206 AC 1 CYS A 180 ? TRP A 182 ? CYS A 180 TRP A 182 AC 2 VAL A 190 ? ASP A 192 ? VAL A 190 ASP A 192 AD 1 VAL A 264 ? PRO A 269 ? VAL A 264 PRO A 269 AD 2 ILE A 283 ? VAL A 290 ? ILE A 283 VAL A 290 AD 3 VAL A 296 ? VAL A 298 ? VAL A 296 VAL A 298 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA 1 2 N ALA A 64 ? N ALA A 64 O VAL A 34 ? O VAL A 34 AA 2 3 N VAL A 35 ? N VAL A 35 O ILE A 4 ? O ILE A 4 AA 3 4 N LEU A 7 ? N LEU A 7 O VAL A 81 ? O VAL A 81 AA 4 5 N ALA A 82 ? N ALA A 82 O LYS A 123 ? O LYS A 123 AA 5 6 N VAL A 126 ? N VAL A 126 O CYS A 151 ? O CYS A 151 AB 1 2 N HIS A 177 ? N HIS A 177 O THR A 197 ? O THR A 197 AB 2 3 N VAL A 198 ? N VAL A 198 O VAL A 205 ? O VAL A 205 AC 1 2 O TRP A 182 ? O TRP A 182 N VAL A 190 ? N VAL A 190 AD 1 2 N ILE A 268 ? N ILE A 268 O PHE A 284 ? O PHE A 284 AD 2 3 N THR A 289 ? N THR A 289 O HIS A 297 ? O HIS A 297 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 GLN A 146 ? ? -77.02 -169.42 2 1 ASN A 187 ? ? 69.06 -48.17 3 1 ASP A 209 ? ? -96.35 40.25 4 1 SER A 239 ? ? -67.67 64.26 # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] 'X-RAY DIFFRACTION' 1 ? refined 34.6530 15.1941 -31.4887 0.8016 0.7261 0.7258 0.0495 0.0729 -0.0774 1.6339 2.4735 3.6028 0.6974 0.9031 0.9213 0.0420 -0.0453 0.3246 -0.2290 -0.1773 0.3165 -0.4357 -0.5063 0.1478 'X-RAY DIFFRACTION' 2 ? refined 30.0973 1.5097 -14.6460 1.0143 0.9895 0.8288 -0.2199 0.2120 -0.0572 0.8172 0.5373 0.8811 0.3588 0.5805 0.6754 0.1589 -0.5698 0.0158 0.8830 -0.2403 0.7488 0.2454 -0.6635 0.2511 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 'X-RAY DIFFRACTION' 1 1 ? ? ? ? ? ? ? ? ? ;CHAIN 'A' AND (RESID 2 THROUGH 152 ) ; 'X-RAY DIFFRACTION' 2 2 ? ? ? ? ? ? ? ? ? ;CHAIN 'A' AND (RESID 153 THROUGH 336 ) ; # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 1 ? A MET 1 2 1 Y 1 A LEU 200 ? A LEU 200 3 1 Y 1 A PRO 201 ? A PRO 201 4 1 Y 1 A GLU 202 ? A GLU 202 5 1 Y 1 A GLY 203 ? A GLY 203 6 1 Y 1 A ALA 259 ? A ALA 259 7 1 Y 1 A GLU 260 ? A GLU 260 8 1 Y 1 A GLY 261 ? A GLY 261 9 1 Y 1 A HIS 337 ? A HIS 337 10 1 Y 1 A HIS 338 ? A HIS 338 11 1 Y 1 A HIS 339 ? A HIS 339 12 1 Y 1 A HIS 340 ? A HIS 340 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HIS N N N N 137 HIS CA C N S 138 HIS C C N N 139 HIS O O N N 140 HIS CB C N N 141 HIS CG C Y N 142 HIS ND1 N Y N 143 HIS CD2 C Y N 144 HIS CE1 C Y N 145 HIS NE2 N Y N 146 HIS OXT O N N 147 HIS H H N N 148 HIS H2 H N N 149 HIS HA H N N 150 HIS HB2 H N N 151 HIS HB3 H N N 152 HIS HD1 H N N 153 HIS HD2 H N N 154 HIS HE1 H N N 155 HIS HE2 H N N 156 HIS HXT H N N 157 HOH O O N N 158 HOH H1 H N N 159 HOH H2 H N N 160 ILE N N N N 161 ILE CA C N S 162 ILE C C N N 163 ILE O O N N 164 ILE CB C N S 165 ILE CG1 C N N 166 ILE CG2 C N N 167 ILE CD1 C N N 168 ILE OXT O N N 169 ILE H H N N 170 ILE H2 H N N 171 ILE HA H N N 172 ILE HB H N N 173 ILE HG12 H N N 174 ILE HG13 H N N 175 ILE HG21 H N N 176 ILE HG22 H N N 177 ILE HG23 H N N 178 ILE HD11 H N N 179 ILE HD12 H N N 180 ILE HD13 H N N 181 ILE HXT H N N 182 LEU N N N N 183 LEU CA C N S 184 LEU C C N N 185 LEU O O N N 186 LEU CB C N N 187 LEU CG C N N 188 LEU CD1 C N N 189 LEU CD2 C N N 190 LEU OXT O N N 191 LEU H H N N 192 LEU H2 H N N 193 LEU HA H N N 194 LEU HB2 H N N 195 LEU HB3 H N N 196 LEU HG H N N 197 LEU HD11 H N N 198 LEU HD12 H N N 199 LEU HD13 H N N 200 LEU HD21 H N N 201 LEU HD22 H N N 202 LEU HD23 H N N 203 LEU HXT H N N 204 LYS N N N N 205 LYS CA C N S 206 LYS C C N N 207 LYS O O N N 208 LYS CB C N N 209 LYS CG C N N 210 LYS CD C N N 211 LYS CE C N N 212 LYS NZ N N N 213 LYS OXT O N N 214 LYS H H N N 215 LYS H2 H N N 216 LYS HA H N N 217 LYS HB2 H N N 218 LYS HB3 H N N 219 LYS HG2 H N N 220 LYS HG3 H N N 221 LYS HD2 H N N 222 LYS HD3 H N N 223 LYS HE2 H N N 224 LYS HE3 H N N 225 LYS HZ1 H N N 226 LYS HZ2 H N N 227 LYS HZ3 H N N 228 LYS HXT H N N 229 MET N N N N 230 MET CA C N S 231 MET C C N N 232 MET O O N N 233 MET CB C N N 234 MET CG C N N 235 MET SD S N N 236 MET CE C N N 237 MET OXT O N N 238 MET H H N N 239 MET H2 H N N 240 MET HA H N N 241 MET HB2 H N N 242 MET HB3 H N N 243 MET HG2 H N N 244 MET HG3 H N N 245 MET HE1 H N N 246 MET HE2 H N N 247 MET HE3 H N N 248 MET HXT H N N 249 PHE N N N N 250 PHE CA C N S 251 PHE C C N N 252 PHE O O N N 253 PHE CB C N N 254 PHE CG C Y N 255 PHE CD1 C Y N 256 PHE CD2 C Y N 257 PHE CE1 C Y N 258 PHE CE2 C Y N 259 PHE CZ C Y N 260 PHE OXT O N N 261 PHE H H N N 262 PHE H2 H N N 263 PHE HA H N N 264 PHE HB2 H N N 265 PHE HB3 H N N 266 PHE HD1 H N N 267 PHE HD2 H N N 268 PHE HE1 H N N 269 PHE HE2 H N N 270 PHE HZ H N N 271 PHE HXT H N N 272 PRO N N N N 273 PRO CA C N S 274 PRO C C N N 275 PRO O O N N 276 PRO CB C N N 277 PRO CG C N N 278 PRO CD C N N 279 PRO OXT O N N 280 PRO H H N N 281 PRO HA H N N 282 PRO HB2 H N N 283 PRO HB3 H N N 284 PRO HG2 H N N 285 PRO HG3 H N N 286 PRO HD2 H N N 287 PRO HD3 H N N 288 PRO HXT H N N 289 SER N N N N 290 SER CA C N S 291 SER C C N N 292 SER O O N N 293 SER CB C N N 294 SER OG O N N 295 SER OXT O N N 296 SER H H N N 297 SER H2 H N N 298 SER HA H N N 299 SER HB2 H N N 300 SER HB3 H N N 301 SER HG H N N 302 SER HXT H N N 303 THR N N N N 304 THR CA C N S 305 THR C C N N 306 THR O O N N 307 THR CB C N R 308 THR OG1 O N N 309 THR CG2 C N N 310 THR OXT O N N 311 THR H H N N 312 THR H2 H N N 313 THR HA H N N 314 THR HB H N N 315 THR HG1 H N N 316 THR HG21 H N N 317 THR HG22 H N N 318 THR HG23 H N N 319 THR HXT H N N 320 TRP N N N N 321 TRP CA C N S 322 TRP C C N N 323 TRP O O N N 324 TRP CB C N N 325 TRP CG C Y N 326 TRP CD1 C Y N 327 TRP CD2 C Y N 328 TRP NE1 N Y N 329 TRP CE2 C Y N 330 TRP CE3 C Y N 331 TRP CZ2 C Y N 332 TRP CZ3 C Y N 333 TRP CH2 C Y N 334 TRP OXT O N N 335 TRP H H N N 336 TRP H2 H N N 337 TRP HA H N N 338 TRP HB2 H N N 339 TRP HB3 H N N 340 TRP HD1 H N N 341 TRP HE1 H N N 342 TRP HE3 H N N 343 TRP HZ2 H N N 344 TRP HZ3 H N N 345 TRP HH2 H N N 346 TRP HXT H N N 347 TYR N N N N 348 TYR CA C N S 349 TYR C C N N 350 TYR O O N N 351 TYR CB C N N 352 TYR CG C Y N 353 TYR CD1 C Y N 354 TYR CD2 C Y N 355 TYR CE1 C Y N 356 TYR CE2 C Y N 357 TYR CZ C Y N 358 TYR OH O N N 359 TYR OXT O N N 360 TYR H H N N 361 TYR H2 H N N 362 TYR HA H N N 363 TYR HB2 H N N 364 TYR HB3 H N N 365 TYR HD1 H N N 366 TYR HD2 H N N 367 TYR HE1 H N N 368 TYR HE2 H N N 369 TYR HH H N N 370 TYR HXT H N N 371 VAL N N N N 372 VAL CA C N S 373 VAL C C N N 374 VAL O O N N 375 VAL CB C N N 376 VAL CG1 C N N 377 VAL CG2 C N N 378 VAL OXT O N N 379 VAL H H N N 380 VAL H2 H N N 381 VAL HA H N N 382 VAL HB H N N 383 VAL HG11 H N N 384 VAL HG12 H N N 385 VAL HG13 H N N 386 VAL HG21 H N N 387 VAL HG22 H N N 388 VAL HG23 H N N 389 VAL HXT H N N 390 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 HOH O H1 sing N N 150 HOH O H2 sing N N 151 ILE N CA sing N N 152 ILE N H sing N N 153 ILE N H2 sing N N 154 ILE CA C sing N N 155 ILE CA CB sing N N 156 ILE CA HA sing N N 157 ILE C O doub N N 158 ILE C OXT sing N N 159 ILE CB CG1 sing N N 160 ILE CB CG2 sing N N 161 ILE CB HB sing N N 162 ILE CG1 CD1 sing N N 163 ILE CG1 HG12 sing N N 164 ILE CG1 HG13 sing N N 165 ILE CG2 HG21 sing N N 166 ILE CG2 HG22 sing N N 167 ILE CG2 HG23 sing N N 168 ILE CD1 HD11 sing N N 169 ILE CD1 HD12 sing N N 170 ILE CD1 HD13 sing N N 171 ILE OXT HXT sing N N 172 LEU N CA sing N N 173 LEU N H sing N N 174 LEU N H2 sing N N 175 LEU CA C sing N N 176 LEU CA CB sing N N 177 LEU CA HA sing N N 178 LEU C O doub N N 179 LEU C OXT sing N N 180 LEU CB CG sing N N 181 LEU CB HB2 sing N N 182 LEU CB HB3 sing N N 183 LEU CG CD1 sing N N 184 LEU CG CD2 sing N N 185 LEU CG HG sing N N 186 LEU CD1 HD11 sing N N 187 LEU CD1 HD12 sing N N 188 LEU CD1 HD13 sing N N 189 LEU CD2 HD21 sing N N 190 LEU CD2 HD22 sing N N 191 LEU CD2 HD23 sing N N 192 LEU OXT HXT sing N N 193 LYS N CA sing N N 194 LYS N H sing N N 195 LYS N H2 sing N N 196 LYS CA C sing N N 197 LYS CA CB sing N N 198 LYS CA HA sing N N 199 LYS C O doub N N 200 LYS C OXT sing N N 201 LYS CB CG sing N N 202 LYS CB HB2 sing N N 203 LYS CB HB3 sing N N 204 LYS CG CD sing N N 205 LYS CG HG2 sing N N 206 LYS CG HG3 sing N N 207 LYS CD CE sing N N 208 LYS CD HD2 sing N N 209 LYS CD HD3 sing N N 210 LYS CE NZ sing N N 211 LYS CE HE2 sing N N 212 LYS CE HE3 sing N N 213 LYS NZ HZ1 sing N N 214 LYS NZ HZ2 sing N N 215 LYS NZ HZ3 sing N N 216 LYS OXT HXT sing N N 217 MET N CA sing N N 218 MET N H sing N N 219 MET N H2 sing N N 220 MET CA C sing N N 221 MET CA CB sing N N 222 MET CA HA sing N N 223 MET C O doub N N 224 MET C OXT sing N N 225 MET CB CG sing N N 226 MET CB HB2 sing N N 227 MET CB HB3 sing N N 228 MET CG SD sing N N 229 MET CG HG2 sing N N 230 MET CG HG3 sing N N 231 MET SD CE sing N N 232 MET CE HE1 sing N N 233 MET CE HE2 sing N N 234 MET CE HE3 sing N N 235 MET OXT HXT sing N N 236 PHE N CA sing N N 237 PHE N H sing N N 238 PHE N H2 sing N N 239 PHE CA C sing N N 240 PHE CA CB sing N N 241 PHE CA HA sing N N 242 PHE C O doub N N 243 PHE C OXT sing N N 244 PHE CB CG sing N N 245 PHE CB HB2 sing N N 246 PHE CB HB3 sing N N 247 PHE CG CD1 doub Y N 248 PHE CG CD2 sing Y N 249 PHE CD1 CE1 sing Y N 250 PHE CD1 HD1 sing N N 251 PHE CD2 CE2 doub Y N 252 PHE CD2 HD2 sing N N 253 PHE CE1 CZ doub Y N 254 PHE CE1 HE1 sing N N 255 PHE CE2 CZ sing Y N 256 PHE CE2 HE2 sing N N 257 PHE CZ HZ sing N N 258 PHE OXT HXT sing N N 259 PRO N CA sing N N 260 PRO N CD sing N N 261 PRO N H sing N N 262 PRO CA C sing N N 263 PRO CA CB sing N N 264 PRO CA HA sing N N 265 PRO C O doub N N 266 PRO C OXT sing N N 267 PRO CB CG sing N N 268 PRO CB HB2 sing N N 269 PRO CB HB3 sing N N 270 PRO CG CD sing N N 271 PRO CG HG2 sing N N 272 PRO CG HG3 sing N N 273 PRO CD HD2 sing N N 274 PRO CD HD3 sing N N 275 PRO OXT HXT sing N N 276 SER N CA sing N N 277 SER N H sing N N 278 SER N H2 sing N N 279 SER CA C sing N N 280 SER CA CB sing N N 281 SER CA HA sing N N 282 SER C O doub N N 283 SER C OXT sing N N 284 SER CB OG sing N N 285 SER CB HB2 sing N N 286 SER CB HB3 sing N N 287 SER OG HG sing N N 288 SER OXT HXT sing N N 289 THR N CA sing N N 290 THR N H sing N N 291 THR N H2 sing N N 292 THR CA C sing N N 293 THR CA CB sing N N 294 THR CA HA sing N N 295 THR C O doub N N 296 THR C OXT sing N N 297 THR CB OG1 sing N N 298 THR CB CG2 sing N N 299 THR CB HB sing N N 300 THR OG1 HG1 sing N N 301 THR CG2 HG21 sing N N 302 THR CG2 HG22 sing N N 303 THR CG2 HG23 sing N N 304 THR OXT HXT sing N N 305 TRP N CA sing N N 306 TRP N H sing N N 307 TRP N H2 sing N N 308 TRP CA C sing N N 309 TRP CA CB sing N N 310 TRP CA HA sing N N 311 TRP C O doub N N 312 TRP C OXT sing N N 313 TRP CB CG sing N N 314 TRP CB HB2 sing N N 315 TRP CB HB3 sing N N 316 TRP CG CD1 doub Y N 317 TRP CG CD2 sing Y N 318 TRP CD1 NE1 sing Y N 319 TRP CD1 HD1 sing N N 320 TRP CD2 CE2 doub Y N 321 TRP CD2 CE3 sing Y N 322 TRP NE1 CE2 sing Y N 323 TRP NE1 HE1 sing N N 324 TRP CE2 CZ2 sing Y N 325 TRP CE3 CZ3 doub Y N 326 TRP CE3 HE3 sing N N 327 TRP CZ2 CH2 doub Y N 328 TRP CZ2 HZ2 sing N N 329 TRP CZ3 CH2 sing Y N 330 TRP CZ3 HZ3 sing N N 331 TRP CH2 HH2 sing N N 332 TRP OXT HXT sing N N 333 TYR N CA sing N N 334 TYR N H sing N N 335 TYR N H2 sing N N 336 TYR CA C sing N N 337 TYR CA CB sing N N 338 TYR CA HA sing N N 339 TYR C O doub N N 340 TYR C OXT sing N N 341 TYR CB CG sing N N 342 TYR CB HB2 sing N N 343 TYR CB HB3 sing N N 344 TYR CG CD1 doub Y N 345 TYR CG CD2 sing Y N 346 TYR CD1 CE1 sing Y N 347 TYR CD1 HD1 sing N N 348 TYR CD2 CE2 doub Y N 349 TYR CD2 HD2 sing N N 350 TYR CE1 CZ doub Y N 351 TYR CE1 HE1 sing N N 352 TYR CE2 CZ sing Y N 353 TYR CE2 HE2 sing N N 354 TYR CZ OH sing N N 355 TYR OH HH sing N N 356 TYR OXT HXT sing N N 357 VAL N CA sing N N 358 VAL N H sing N N 359 VAL N H2 sing N N 360 VAL CA C sing N N 361 VAL CA CB sing N N 362 VAL CA HA sing N N 363 VAL C O doub N N 364 VAL C OXT sing N N 365 VAL CB CG1 sing N N 366 VAL CB CG2 sing N N 367 VAL CB HB sing N N 368 VAL CG1 HG11 sing N N 369 VAL CG1 HG12 sing N N 370 VAL CG1 HG13 sing N N 371 VAL CG2 HG21 sing N N 372 VAL CG2 HG22 sing N N 373 VAL CG2 HG23 sing N N 374 VAL OXT HXT sing N N 375 # _pdbx_initial_refinement_model.accession_code ? _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'in silico model' _pdbx_initial_refinement_model.source_name Other _pdbx_initial_refinement_model.details 'HOMOLOGY MODEL BASED ON TRICHOMONAS VAGINALIS LDH' # _atom_sites.entry_id 4UUO _atom_sites.fract_transf_matrix[1][1] 0.006452 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.006452 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.006452 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_