HEADER TRANSFERASE 21-AUG-14 4UXB TITLE HUMAN ARTD1 (PARP1) - CATALYTIC DOMAIN IN COMPLEX WITH INHIBITOR PJ34 COMPND MOL_ID: 1; COMPND 2 MOLECULE: POLY ADP-RIBOSE POLYMERASE 1; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: CATALYTIC DOMAIN, RESIDUES 662-1011; COMPND 5 SYNONYM: PARP-1, ADP-RIBOSYLTRANSFERASE DIPHTHERIA TOXIN-LIKE 1, COMPND 6 ARTD1, NAD(+) ADP-RIBOSYLTRANSFERASE 1, ADPRT 1, POLYADP-RIBOSEH COMPND 7 SYNTASE 1, POLY ADP-RIBOSE POLYMERASE 1; COMPND 8 EC: 2.4.2.30; COMPND 9 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VARIANT: ROSETTA2; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PNIC-BSA4 KEYWDS TRANSFERASE, NAD, ADP-RIBOSE, PARP1, ARTD1, ARTD TRANSFERASE DOMAIN, KEYWDS 2 ADP- RIBOSYLATION, TRANSFERASE-TRANSFERASE INHIBITOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR L.TRESAUGUES,A.G.THORSELL,T.KARLBERG,H.SCHULER REVDAT 4 10-JAN-24 4UXB 1 REMARK REVDAT 3 22-MAR-17 4UXB 1 JRNL REVDAT 2 18-JAN-17 4UXB 1 JRNL REVDAT 1 02-SEP-15 4UXB 0 JRNL AUTH A.G.THORSELL,T.EKBLAD,T.KARLBERG,M.LOW,A.F.PINTO, JRNL AUTH 2 L.TRESAUGUES,M.MOCHE,M.S.COHEN,H.SCHULER JRNL TITL STRUCTURAL BASIS FOR POTENCY AND PROMISCUITY IN JRNL TITL 2 POLY(ADP-RIBOSE) POLYMERASE (PARP) AND TANKYRASE INHIBITORS. JRNL REF J. MED. CHEM. V. 60 1262 2017 JRNL REFN ISSN 1520-4804 JRNL PMID 28001384 JRNL DOI 10.1021/ACS.JMEDCHEM.6B00990 REMARK 2 REMARK 2 RESOLUTION. 3.22 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER 2.11.5 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.22 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 45.61 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 93.9 REMARK 3 NUMBER OF REFLECTIONS : 12412 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.238 REMARK 3 R VALUE (WORKING SET) : 0.236 REMARK 3 FREE R VALUE : 0.273 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.870 REMARK 3 FREE R VALUE TEST SET COUNT : 604 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 3.22 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 3.53 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 93.88 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 2757 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.3035 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 2626 REMARK 3 BIN R VALUE (WORKING SET) : 0.2999 REMARK 3 BIN FREE R VALUE : 0.3803 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 4.75 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 131 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5214 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 49 REMARK 3 SOLVENT ATOMS : 23 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 110.8 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 96.53 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 12.57090 REMARK 3 B22 (A**2) : 12.88430 REMARK 3 B33 (A**2) : -25.45520 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.852 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : NULL REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : 0.570 REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : NULL REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : NULL REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.901 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.910 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 5356 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 7222 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 2528 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : 141 ; 2.000 ; HARMONIC REMARK 3 GENERAL PLANES : 745 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 5356 ; 20.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : NULL ; NULL ; NULL REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 692 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 5664 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.008 REMARK 3 BOND ANGLES (DEGREES) : 1.02 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 2.24 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 3.50 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN A REMARK 3 ORIGIN FOR THE GROUP (A): 4.3135 25.3467 27.4870 REMARK 3 T TENSOR REMARK 3 T11: -0.4027 T22: -0.3995 REMARK 3 T33: 0.3034 T12: -0.0753 REMARK 3 T13: 0.0738 T23: -0.1226 REMARK 3 L TENSOR REMARK 3 L11: 4.1861 L22: 3.0587 REMARK 3 L33: 3.0094 L12: -0.4781 REMARK 3 L13: -1.6230 L23: -0.8346 REMARK 3 S TENSOR REMARK 3 S11: 0.3062 S12: -0.2166 S13: 0.5847 REMARK 3 S21: 0.0058 S22: -0.1054 S23: 0.0553 REMARK 3 S31: -0.4929 S32: 0.4168 S33: -0.2007 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN B REMARK 3 ORIGIN FOR THE GROUP (A): -36.3854 11.2577 21.4283 REMARK 3 T TENSOR REMARK 3 T11: -0.4650 T22: -0.2198 REMARK 3 T33: 0.1380 T12: -0.1131 REMARK 3 T13: 0.1129 T23: -0.0674 REMARK 3 L TENSOR REMARK 3 L11: 5.7813 L22: 4.5209 REMARK 3 L33: 1.9207 L12: -2.3466 REMARK 3 L13: 0.2100 L23: -0.3106 REMARK 3 S TENSOR REMARK 3 S11: 0.1731 S12: 0.1261 S13: -0.1054 REMARK 3 S21: -0.6411 S22: -0.0344 S23: -0.0857 REMARK 3 S31: 0.0566 S32: -0.0111 S33: -0.1386 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4UXB COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 21-AUG-14. REMARK 100 THE DEPOSITION ID IS D_1290061585. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 29-OCT-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I24 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.96865 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL MONOCHROMATORS REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 12743 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.220 REMARK 200 RESOLUTION RANGE LOW (A) : 47.400 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.8 REMARK 200 DATA REDUNDANCY : 3.700 REMARK 200 R MERGE (I) : 0.22000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 2.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.22 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.39 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.2 REMARK 200 DATA REDUNDANCY IN SHELL : 3.80 REMARK 200 R MERGE FOR SHELL (I) : 0.92000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 0.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB 4L6S REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 52.44 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.54 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 25% PEG3350 0.2M AMMONIUM SULFATE, REMARK 280 0.1M BIS-TRIS PH 5.5, 1MM PJ34 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: F 2 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X,Y+1/2,Z+1/2 REMARK 290 6555 -X,-Y+1/2,Z+1/2 REMARK 290 7555 -X,Y+1/2,-Z+1/2 REMARK 290 8555 X,-Y+1/2,-Z+1/2 REMARK 290 9555 X+1/2,Y,Z+1/2 REMARK 290 10555 -X+1/2,-Y,Z+1/2 REMARK 290 11555 -X+1/2,Y,-Z+1/2 REMARK 290 12555 X+1/2,-Y,-Z+1/2 REMARK 290 13555 X+1/2,Y+1/2,Z REMARK 290 14555 -X+1/2,-Y+1/2,Z REMARK 290 15555 -X+1/2,Y+1/2,-Z REMARK 290 16555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 83.21150 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 91.47250 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 83.21150 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 91.47250 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 83.21150 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 91.47250 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 83.21150 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 91.47250 REMARK 290 SMTRY1 9 1.000000 0.000000 0.000000 52.62100 REMARK 290 SMTRY2 9 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 91.47250 REMARK 290 SMTRY1 10 -1.000000 0.000000 0.000000 52.62100 REMARK 290 SMTRY2 10 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 1.000000 91.47250 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 52.62100 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 91.47250 REMARK 290 SMTRY1 12 1.000000 0.000000 0.000000 52.62100 REMARK 290 SMTRY2 12 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 91.47250 REMARK 290 SMTRY1 13 1.000000 0.000000 0.000000 52.62100 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 83.21150 REMARK 290 SMTRY3 13 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 14 -1.000000 0.000000 0.000000 52.62100 REMARK 290 SMTRY2 14 0.000000 -1.000000 0.000000 83.21150 REMARK 290 SMTRY3 14 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 15 -1.000000 0.000000 0.000000 52.62100 REMARK 290 SMTRY2 15 0.000000 1.000000 0.000000 83.21150 REMARK 290 SMTRY3 15 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 16 1.000000 0.000000 0.000000 52.62100 REMARK 290 SMTRY2 16 0.000000 -1.000000 0.000000 83.21150 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 660 REMARK 465 GLY A 723 REMARK 465 SER A 724 REMARK 465 SER A 725 REMARK 465 PHE A 744 REMARK 465 GLY A 745 REMARK 465 MET A 746 REMARK 465 LYS A 747 REMARK 465 LYS A 748 REMARK 465 PRO A 749 REMARK 465 GLY A 780 REMARK 465 GLY A 781 REMARK 465 SER A 782 REMARK 465 ASP A 783 REMARK 465 ASP A 784 REMARK 465 SER A 785 REMARK 465 SER A 786 REMARK 465 LYS A 787 REMARK 465 THR A 824 REMARK 465 THR A 825 REMARK 465 HIS A 826 REMARK 465 ALA A 935 REMARK 465 SER A 936 REMARK 465 HIS A 937 REMARK 465 ILE A 938 REMARK 465 GLY A 978 REMARK 465 VAL A 979 REMARK 465 ASN A 980 REMARK 465 THR A 1011 REMARK 465 SER B 660 REMARK 465 MET B 661 REMARK 465 PHE B 744 REMARK 465 GLY B 745 REMARK 465 MET B 746 REMARK 465 LYS B 747 REMARK 465 LYS B 748 REMARK 465 PRO B 749 REMARK 465 GLY B 781 REMARK 465 SER B 782 REMARK 465 ASP B 783 REMARK 465 ASP B 784 REMARK 465 SER B 785 REMARK 465 SER B 786 REMARK 465 LYS B 1010 REMARK 465 THR B 1011 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 719 41.69 -75.77 REMARK 500 ASN A 753 -32.95 -145.66 REMARK 500 THR A 821 30.73 -96.36 REMARK 500 LEU A 941 120.80 -22.41 REMARK 500 LYS A 943 98.20 -59.50 REMARK 500 ASP A 957 115.98 -39.35 REMARK 500 SER A 963 71.48 -104.91 REMARK 500 LEU A 985 -74.75 -66.34 REMARK 500 SER B 725 126.29 -35.13 REMARK 500 ASN B 753 -32.10 -145.11 REMARK 500 LYS B 798 68.75 37.32 REMARK 500 THR B 821 30.80 -96.58 REMARK 500 ALA B 823 172.50 -55.62 REMARK 500 ASN B 856 47.19 39.80 REMARK 500 HIS B 909 71.65 58.01 REMARK 500 LYS B 943 97.11 -58.97 REMARK 500 ASP B 957 115.92 -38.97 REMARK 500 SER B 963 71.30 -105.03 REMARK 500 ASP B 981 49.70 -89.01 REMARK 500 LEU B 985 -74.61 -66.46 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE P34 A 2011 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE P34 B 2010 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 2012 DBREF 4UXB A 662 1011 UNP P09874 PARP1_HUMAN 662 1011 DBREF 4UXB B 662 1011 UNP P09874 PARP1_HUMAN 662 1011 SEQADV 4UXB SER A 660 UNP P09874 EXPRESSION TAG SEQADV 4UXB MET A 661 UNP P09874 EXPRESSION TAG SEQADV 4UXB ALA A 762 UNP P09874 VAL 762 VARIANT SEQADV 4UXB SER B 660 UNP P09874 EXPRESSION TAG SEQADV 4UXB MET B 661 UNP P09874 EXPRESSION TAG SEQADV 4UXB ALA B 762 UNP P09874 VAL 762 VARIANT SEQRES 1 A 352 SER MET LYS SER LYS LEU PRO LYS PRO VAL GLN ASP LEU SEQRES 2 A 352 ILE LYS MET ILE PHE ASP VAL GLU SER MET LYS LYS ALA SEQRES 3 A 352 MET VAL GLU TYR GLU ILE ASP LEU GLN LYS MET PRO LEU SEQRES 4 A 352 GLY LYS LEU SER LYS ARG GLN ILE GLN ALA ALA TYR SER SEQRES 5 A 352 ILE LEU SER GLU VAL GLN GLN ALA VAL SER GLN GLY SER SEQRES 6 A 352 SER ASP SER GLN ILE LEU ASP LEU SER ASN ARG PHE TYR SEQRES 7 A 352 THR LEU ILE PRO HIS ASP PHE GLY MET LYS LYS PRO PRO SEQRES 8 A 352 LEU LEU ASN ASN ALA ASP SER VAL GLN ALA LYS ALA GLU SEQRES 9 A 352 MET LEU ASP ASN LEU LEU ASP ILE GLU VAL ALA TYR SER SEQRES 10 A 352 LEU LEU ARG GLY GLY SER ASP ASP SER SER LYS ASP PRO SEQRES 11 A 352 ILE ASP VAL ASN TYR GLU LYS LEU LYS THR ASP ILE LYS SEQRES 12 A 352 VAL VAL ASP ARG ASP SER GLU GLU ALA GLU ILE ILE ARG SEQRES 13 A 352 LYS TYR VAL LYS ASN THR HIS ALA THR THR HIS ASN ALA SEQRES 14 A 352 TYR ASP LEU GLU VAL ILE ASP ILE PHE LYS ILE GLU ARG SEQRES 15 A 352 GLU GLY GLU CYS GLN ARG TYR LYS PRO PHE LYS GLN LEU SEQRES 16 A 352 HIS ASN ARG ARG LEU LEU TRP HIS GLY SER ARG THR THR SEQRES 17 A 352 ASN PHE ALA GLY ILE LEU SER GLN GLY LEU ARG ILE ALA SEQRES 18 A 352 PRO PRO GLU ALA PRO VAL THR GLY TYR MET PHE GLY LYS SEQRES 19 A 352 GLY ILE TYR PHE ALA ASP MET VAL SER LYS SER ALA ASN SEQRES 20 A 352 TYR CYS HIS THR SER GLN GLY ASP PRO ILE GLY LEU ILE SEQRES 21 A 352 LEU LEU GLY GLU VAL ALA LEU GLY ASN MET TYR GLU LEU SEQRES 22 A 352 LYS HIS ALA SER HIS ILE SER LYS LEU PRO LYS GLY LYS SEQRES 23 A 352 HIS SER VAL LYS GLY LEU GLY LYS THR THR PRO ASP PRO SEQRES 24 A 352 SER ALA ASN ILE SER LEU ASP GLY VAL ASP VAL PRO LEU SEQRES 25 A 352 GLY THR GLY ILE SER SER GLY VAL ASN ASP THR SER LEU SEQRES 26 A 352 LEU TYR ASN GLU TYR ILE VAL TYR ASP ILE ALA GLN VAL SEQRES 27 A 352 ASN LEU LYS TYR LEU LEU LYS LEU LYS PHE ASN PHE LYS SEQRES 28 A 352 THR SEQRES 1 B 352 SER MET LYS SER LYS LEU PRO LYS PRO VAL GLN ASP LEU SEQRES 2 B 352 ILE LYS MET ILE PHE ASP VAL GLU SER MET LYS LYS ALA SEQRES 3 B 352 MET VAL GLU TYR GLU ILE ASP LEU GLN LYS MET PRO LEU SEQRES 4 B 352 GLY LYS LEU SER LYS ARG GLN ILE GLN ALA ALA TYR SER SEQRES 5 B 352 ILE LEU SER GLU VAL GLN GLN ALA VAL SER GLN GLY SER SEQRES 6 B 352 SER ASP SER GLN ILE LEU ASP LEU SER ASN ARG PHE TYR SEQRES 7 B 352 THR LEU ILE PRO HIS ASP PHE GLY MET LYS LYS PRO PRO SEQRES 8 B 352 LEU LEU ASN ASN ALA ASP SER VAL GLN ALA LYS ALA GLU SEQRES 9 B 352 MET LEU ASP ASN LEU LEU ASP ILE GLU VAL ALA TYR SER SEQRES 10 B 352 LEU LEU ARG GLY GLY SER ASP ASP SER SER LYS ASP PRO SEQRES 11 B 352 ILE ASP VAL ASN TYR GLU LYS LEU LYS THR ASP ILE LYS SEQRES 12 B 352 VAL VAL ASP ARG ASP SER GLU GLU ALA GLU ILE ILE ARG SEQRES 13 B 352 LYS TYR VAL LYS ASN THR HIS ALA THR THR HIS ASN ALA SEQRES 14 B 352 TYR ASP LEU GLU VAL ILE ASP ILE PHE LYS ILE GLU ARG SEQRES 15 B 352 GLU GLY GLU CYS GLN ARG TYR LYS PRO PHE LYS GLN LEU SEQRES 16 B 352 HIS ASN ARG ARG LEU LEU TRP HIS GLY SER ARG THR THR SEQRES 17 B 352 ASN PHE ALA GLY ILE LEU SER GLN GLY LEU ARG ILE ALA SEQRES 18 B 352 PRO PRO GLU ALA PRO VAL THR GLY TYR MET PHE GLY LYS SEQRES 19 B 352 GLY ILE TYR PHE ALA ASP MET VAL SER LYS SER ALA ASN SEQRES 20 B 352 TYR CYS HIS THR SER GLN GLY ASP PRO ILE GLY LEU ILE SEQRES 21 B 352 LEU LEU GLY GLU VAL ALA LEU GLY ASN MET TYR GLU LEU SEQRES 22 B 352 LYS HIS ALA SER HIS ILE SER LYS LEU PRO LYS GLY LYS SEQRES 23 B 352 HIS SER VAL LYS GLY LEU GLY LYS THR THR PRO ASP PRO SEQRES 24 B 352 SER ALA ASN ILE SER LEU ASP GLY VAL ASP VAL PRO LEU SEQRES 25 B 352 GLY THR GLY ILE SER SER GLY VAL ASN ASP THR SER LEU SEQRES 26 B 352 LEU TYR ASN GLU TYR ILE VAL TYR ASP ILE ALA GLN VAL SEQRES 27 B 352 ASN LEU LYS TYR LEU LEU LYS LEU LYS PHE ASN PHE LYS SEQRES 28 B 352 THR HET P34 A2011 22 HET SO4 A2012 5 HET P34 B2010 22 HETNAM P34 N~2~,N~2~-DIMETHYL-N~1~-(6-OXO-5,6- HETNAM 2 P34 DIHYDROPHENANTHRIDIN-2-YL)GLYCINAMIDE HETNAM SO4 SULFATE ION FORMUL 3 P34 2(C17 H17 N3 O2) FORMUL 4 SO4 O4 S 2- FORMUL 6 HOH *23(H2 O) HELIX 1 1 PRO A 666 PHE A 677 1 12 HELIX 2 2 ASP A 678 TYR A 689 1 12 HELIX 3 3 SER A 702 GLN A 718 1 17 HELIX 4 4 ILE A 729 ILE A 740 1 12 HELIX 5 5 ASN A 754 ARG A 779 1 26 HELIX 6 6 ASP A 788 LEU A 797 1 10 HELIX 7 7 SER A 808 THR A 821 1 14 HELIX 8 8 GLU A 844 LYS A 849 1 6 HELIX 9 9 PRO A 850 LEU A 854 5 5 HELIX 10 10 ASN A 868 GLN A 875 1 8 HELIX 11 11 MET A 900 ASN A 906 1 7 HELIX 12 12 TYR A 907 HIS A 909 5 3 HELIX 13 13 PRO A 958 ASN A 961 5 4 HELIX 14 14 ASP A 993 ALA A 995 5 3 HELIX 15 15 PRO B 666 PHE B 677 1 12 HELIX 16 16 ASP B 678 TYR B 689 1 12 HELIX 17 17 SER B 702 GLY B 723 1 22 HELIX 18 18 SER B 725 ILE B 740 1 16 HELIX 19 19 ASN B 754 GLY B 780 1 27 HELIX 20 20 ASP B 788 LEU B 797 1 10 HELIX 21 21 SER B 808 THR B 821 1 14 HELIX 22 22 GLU B 844 LYS B 849 1 6 HELIX 23 23 PRO B 850 LEU B 854 5 5 HELIX 24 24 ASN B 868 GLN B 875 1 8 HELIX 25 25 MET B 900 ASN B 906 1 7 HELIX 26 26 TYR B 907 HIS B 909 5 3 HELIX 27 27 PRO B 958 ASN B 961 5 4 HELIX 28 28 ASP B 993 ALA B 995 5 3 SHEET 1 AA 5 THR A 799 VAL A 803 0 SHEET 2 AA 5 TYR A 829 ARG A 841 -1 O LYS A 838 N LYS A 802 SHEET 3 AA 5 VAL A 997 PHE A1009 -1 O LEU A 999 N ARG A 841 SHEET 4 AA 5 ILE A 916 ALA A 925 -1 O GLY A 917 N LEU A1005 SHEET 5 AA 5 ARG A 857 GLY A 863 -1 O ARG A 858 N VAL A 924 SHEET 1 AB 4 ILE A 895 PHE A 897 0 SHEET 2 AB 4 GLU A 988 VAL A 991 -1 O TYR A 989 N PHE A 897 SHEET 3 AB 4 SER A 947 GLY A 950 -1 O VAL A 948 N ILE A 990 SHEET 4 AB 4 MET A 929 LEU A 932 1 O TYR A 930 N LYS A 949 SHEET 1 AC 2 THR A 954 PRO A 956 0 SHEET 2 AC 2 GLY A 974 SER A 976 -1 O ILE A 975 N THR A 955 SHEET 1 AD 2 ILE A 962 LEU A 964 0 SHEET 2 AD 2 VAL A 967 VAL A 969 -1 O VAL A 967 N LEU A 964 SHEET 1 BA 5 THR B 799 VAL B 803 0 SHEET 2 BA 5 ASP B 830 ARG B 841 -1 O LYS B 838 N LYS B 802 SHEET 3 BA 5 VAL B 997 ASN B1008 -1 O LEU B 999 N ARG B 841 SHEET 4 BA 5 ILE B 916 ALA B 925 -1 O GLY B 917 N LEU B1005 SHEET 5 BA 5 ARG B 857 GLY B 863 -1 O ARG B 858 N VAL B 924 SHEET 1 BB 4 ILE B 895 PHE B 897 0 SHEET 2 BB 4 GLU B 988 VAL B 991 -1 O TYR B 989 N PHE B 897 SHEET 3 BB 4 SER B 947 GLY B 950 -1 O VAL B 948 N ILE B 990 SHEET 4 BB 4 MET B 929 LEU B 932 1 O TYR B 930 N LYS B 949 SHEET 1 BC 2 THR B 954 PRO B 956 0 SHEET 2 BC 2 GLY B 974 SER B 976 -1 O ILE B 975 N THR B 955 SHEET 1 BD 2 ILE B 962 LEU B 964 0 SHEET 2 BD 2 VAL B 967 VAL B 969 -1 O VAL B 967 N LEU B 964 SITE 1 AC1 6 GLU A 763 HIS A 862 GLY A 863 GLY A 888 SITE 2 AC1 6 TYR A 896 SER A 904 SITE 1 AC2 8 HIS B 862 GLY B 863 TYR B 889 TYR B 896 SITE 2 AC2 8 PHE B 897 SER B 904 TYR B 907 GLU B 988 SITE 1 AC3 4 LYS A 838 LYS A1000 GLN B 846 LYS B 849 CRYST1 105.242 166.423 182.945 90.00 90.00 90.00 F 2 2 2 32 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009502 0.000000 0.000000 0.00000 SCALE2 0.000000 0.006009 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005466 0.00000 MTRIX1 1 -0.993000 -0.034870 0.112400 -33.69000 1 MTRIX2 1 -0.099340 -0.264300 -0.959300 45.07000 1 MTRIX3 1 0.063170 -0.963800 0.259000 35.31000 1