HEADER PEPTIDE BINDING PROTEIN 28-AUG-14 4UY4 TITLE 1.86 A STRUCTURE OF HUMAN SPINDLIN-4 PROTEIN IN COMPLEX WITH HISTONE TITLE 2 H3K4ME3 PEPTIDE COMPND MOL_ID: 1; COMPND 2 MOLECULE: SPINDLIN-4; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: UNP RESIDUES 36-249; COMPND 5 ENGINEERED: YES; COMPND 6 OTHER_DETAILS: HISTIDINE TAG CLEAVED, THE NUMBERING START AT THR36; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: HISTONE H3K4ME3; COMPND 9 CHAIN: C, D; COMPND 10 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VARIANT: R3-PRARE2; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_VECTOR: PNIC28-BSA4; SOURCE 11 MOL_ID: 2; SOURCE 12 SYNTHETIC: YES; SOURCE 13 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 14 ORGANISM_COMMON: HUMAN; SOURCE 15 ORGANISM_TAXID: 9606 KEYWDS PEPTIDE BINDING PROTEIN, SPINDLIN MEMBER 4, SPIN4, TUDOR DOMAIN, KEYWDS 2 EPIGENETIC, CYSTICERCOSIS, MENINGOENCEPHALITIS EXPDTA X-RAY DIFFRACTION AUTHOR R.TALON,C.GILEADI,C.JOHANSSON,N.BURGESS-BROWN,L.SHRESTHA,F.VON DELFT, AUTHOR 2 T.KROJER,M.FAIRHEAD,C.BOUNTRA,C.H.ARROWSMITH,A.EDWARDS,U.OPPERMANN REVDAT 5 10-JAN-24 4UY4 1 REMARK REVDAT 4 15-MAY-19 4UY4 1 REMARK LINK REVDAT 3 24-JAN-18 4UY4 1 AUTHOR JRNL REVDAT 2 19-AUG-15 4UY4 1 AUTHOR JRNL REVDAT 1 24-SEP-14 4UY4 0 JRNL AUTH R.TALON,C.GILEADI,C.JOHANSSON,N.BURGESS-BROWN,L.SHRESTHA, JRNL AUTH 2 M.FAIRHEAD,F.VON DELFT,T.KROJER,C.BOUNTRA,C.H.ARROWSMITH, JRNL AUTH 3 A.EDWARDS,U.OPPERMANN JRNL TITL 1.86 A STRUCTURE OF HUMAN SPINDLIN-4 PROTEIN IN COMPLEX WITH JRNL TITL 2 HISTONE H3K4ME3 PEPTIDE JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.86 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.86 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 28.68 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.750 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.1 REMARK 3 NUMBER OF REFLECTIONS : 35879 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.203 REMARK 3 R VALUE (WORKING SET) : 0.202 REMARK 3 FREE R VALUE : 0.235 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1803 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 28.6868 - 4.3734 1.00 2679 137 0.1656 0.2046 REMARK 3 2 4.3734 - 3.4732 0.99 2690 145 0.1644 0.2008 REMARK 3 3 3.4732 - 3.0347 0.99 2648 143 0.1905 0.2101 REMARK 3 4 3.0347 - 2.7575 0.98 2681 137 0.2129 0.2276 REMARK 3 5 2.7575 - 2.5600 0.98 2644 147 0.2309 0.2638 REMARK 3 6 2.5600 - 2.4092 0.98 2669 136 0.2305 0.2344 REMARK 3 7 2.4092 - 2.2886 0.98 2614 140 0.2305 0.2599 REMARK 3 8 2.2886 - 2.1890 0.98 2662 136 0.2308 0.3003 REMARK 3 9 2.1890 - 2.1047 0.97 2638 139 0.2436 0.2789 REMARK 3 10 2.1047 - 2.0321 0.97 2615 143 0.2392 0.2514 REMARK 3 11 2.0321 - 1.9686 0.97 2579 138 0.2599 0.2980 REMARK 3 12 1.9686 - 1.9123 0.97 2644 133 0.2931 0.3747 REMARK 3 13 1.9123 - 1.8620 0.87 2313 129 0.3426 0.4343 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.270 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 29.020 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 29.23 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 49.05 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: 0.2100 REMARK 3 OPERATOR: H,-K,-L REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 3523 REMARK 3 ANGLE : 1.030 4811 REMARK 3 CHIRALITY : 0.053 535 REMARK 3 PLANARITY : 0.005 608 REMARK 3 DIHEDRAL : 13.212 1282 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 12 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (CHAIN A AND RESID 1:9) REMARK 3 ORIGIN FOR THE GROUP (A): 36.0849 3.5271 46.7228 REMARK 3 T TENSOR REMARK 3 T11: 0.2047 T22: 1.0618 REMARK 3 T33: 0.4853 T12: 0.0785 REMARK 3 T13: 0.1316 T23: -0.4141 REMARK 3 L TENSOR REMARK 3 L11: 4.0568 L22: 3.1720 REMARK 3 L33: 8.5717 L12: 0.7860 REMARK 3 L13: -2.8028 L23: -2.0056 REMARK 3 S TENSOR REMARK 3 S11: 0.2128 S12: -0.8579 S13: 0.6313 REMARK 3 S21: 0.1831 S22: -0.4408 S23: 0.9299 REMARK 3 S31: -1.6239 S32: 0.5977 S33: -0.7451 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: (CHAIN A AND RESID 10:26) REMARK 3 ORIGIN FOR THE GROUP (A): 50.3236 13.5527 32.3149 REMARK 3 T TENSOR REMARK 3 T11: 1.1820 T22: -0.1506 REMARK 3 T33: 0.7845 T12: 0.3408 REMARK 3 T13: -0.3025 T23: -0.1529 REMARK 3 L TENSOR REMARK 3 L11: 3.3268 L22: 2.8722 REMARK 3 L33: 3.1297 L12: -0.1630 REMARK 3 L13: 0.2887 L23: 0.6665 REMARK 3 S TENSOR REMARK 3 S11: -0.5604 S12: 0.1369 S13: 1.2173 REMARK 3 S21: -1.4698 S22: -0.1863 S23: 0.3456 REMARK 3 S31: -2.0248 S32: 0.7288 S33: -0.5223 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: (CHAIN A AND RESID 27:74) REMARK 3 ORIGIN FOR THE GROUP (A): 43.7039 6.0242 34.7757 REMARK 3 T TENSOR REMARK 3 T11: 0.4979 T22: 0.3252 REMARK 3 T33: 0.3816 T12: 0.1358 REMARK 3 T13: -0.1232 T23: -0.1297 REMARK 3 L TENSOR REMARK 3 L11: 4.8050 L22: 5.3332 REMARK 3 L33: 4.6874 L12: -0.0620 REMARK 3 L13: -0.2329 L23: 1.3338 REMARK 3 S TENSOR REMARK 3 S11: -0.1685 S12: -0.4737 S13: 0.8515 REMARK 3 S21: -0.4615 S22: -0.3367 S23: 0.2430 REMARK 3 S31: -1.2400 S32: -0.5881 S33: 0.3134 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: (CHAIN A AND RESID 75:154) REMARK 3 ORIGIN FOR THE GROUP (A): 36.5531 -2.1066 14.9195 REMARK 3 T TENSOR REMARK 3 T11: 0.5933 T22: 0.6127 REMARK 3 T33: 0.2916 T12: 0.1392 REMARK 3 T13: -0.1445 T23: -0.0145 REMARK 3 L TENSOR REMARK 3 L11: 6.0895 L22: 3.5613 REMARK 3 L33: 4.1798 L12: 0.5289 REMARK 3 L13: 1.6127 L23: 1.2283 REMARK 3 S TENSOR REMARK 3 S11: -0.3120 S12: 0.8391 S13: 0.3964 REMARK 3 S21: -1.0586 S22: -0.2220 S23: 0.3892 REMARK 3 S31: -1.0796 S32: -0.8437 S33: 0.2803 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: (CHAIN A AND RESID 155:167) REMARK 3 ORIGIN FOR THE GROUP (A): 49.0768 -19.9526 28.6799 REMARK 3 T TENSOR REMARK 3 T11: 0.4331 T22: 0.7453 REMARK 3 T33: 0.5604 T12: 0.0194 REMARK 3 T13: 0.0563 T23: 0.1086 REMARK 3 L TENSOR REMARK 3 L11: 4.2737 L22: 7.3561 REMARK 3 L33: 2.0204 L12: -4.7750 REMARK 3 L13: -4.0781 L23: 3.8106 REMARK 3 S TENSOR REMARK 3 S11: -0.4664 S12: -1.4207 S13: -1.4824 REMARK 3 S21: 0.4863 S22: 0.1785 S23: 0.7237 REMARK 3 S31: 1.6829 S32: 1.0580 S33: 0.9019 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: (CHAIN A AND RESID 168:215) REMARK 3 ORIGIN FOR THE GROUP (A): 49.8347 -10.2126 28.1681 REMARK 3 T TENSOR REMARK 3 T11: 0.1365 T22: 0.2552 REMARK 3 T33: 0.1825 T12: 0.0034 REMARK 3 T13: 0.0218 T23: -0.0354 REMARK 3 L TENSOR REMARK 3 L11: 6.9471 L22: 3.3709 REMARK 3 L33: 6.2118 L12: -0.6589 REMARK 3 L13: -1.2408 L23: 1.0587 REMARK 3 S TENSOR REMARK 3 S11: -0.0356 S12: 0.1408 S13: -0.2184 REMARK 3 S21: -0.0606 S22: 0.1732 S23: -0.2093 REMARK 3 S31: 0.1003 S32: 0.3142 S33: -0.0307 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: (CHAIN B AND RESID 1:9) REMARK 3 ORIGIN FOR THE GROUP (A): 18.3641 25.1227 -25.4681 REMARK 3 T TENSOR REMARK 3 T11: 0.2938 T22: 0.4760 REMARK 3 T33: 0.3230 T12: 0.0742 REMARK 3 T13: -0.0239 T23: -0.0964 REMARK 3 L TENSOR REMARK 3 L11: 7.5902 L22: 5.7768 REMARK 3 L33: 1.6946 L12: 1.8030 REMARK 3 L13: 3.5116 L23: 0.1092 REMARK 3 S TENSOR REMARK 3 S11: 0.2286 S12: 1.1698 S13: -0.2708 REMARK 3 S21: -0.3092 S22: -0.1515 S23: -0.0151 REMARK 3 S31: 1.2774 S32: 0.1813 S33: -0.0111 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: (CHAIN B AND RESID 10:26) REMARK 3 ORIGIN FOR THE GROUP (A): 32.8599 14.7213 -11.3444 REMARK 3 T TENSOR REMARK 3 T11: 1.2498 T22: 0.2724 REMARK 3 T33: 0.6001 T12: 0.3331 REMARK 3 T13: -0.3173 T23: -0.1762 REMARK 3 L TENSOR REMARK 3 L11: 4.7681 L22: 5.5090 REMARK 3 L33: 3.2753 L12: -4.0868 REMARK 3 L13: -1.0428 L23: -1.3865 REMARK 3 S TENSOR REMARK 3 S11: -0.0204 S12: -0.0946 S13: -0.8105 REMARK 3 S21: 1.1644 S22: 0.1999 S23: -0.6875 REMARK 3 S31: 2.4207 S32: 0.0472 S33: -0.1049 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: (CHAIN B AND RESID 27:74) REMARK 3 ORIGIN FOR THE GROUP (A): 25.7777 22.7732 -13.6014 REMARK 3 T TENSOR REMARK 3 T11: 0.5099 T22: 0.2628 REMARK 3 T33: 0.2723 T12: 0.0261 REMARK 3 T13: -0.0414 T23: -0.0708 REMARK 3 L TENSOR REMARK 3 L11: 4.9355 L22: 6.4622 REMARK 3 L33: 5.5146 L12: -2.0491 REMARK 3 L13: 0.6617 L23: 1.2662 REMARK 3 S TENSOR REMARK 3 S11: 0.0748 S12: 0.2231 S13: -0.6254 REMARK 3 S21: 0.6309 S22: -0.1128 S23: -0.0578 REMARK 3 S31: 1.3641 S32: -0.0516 S33: 0.0490 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: (CHAIN B AND RESID 75:154) REMARK 3 ORIGIN FOR THE GROUP (A): 19.1879 30.0472 6.5429 REMARK 3 T TENSOR REMARK 3 T11: 0.6838 T22: 0.5842 REMARK 3 T33: 0.2186 T12: -0.1752 REMARK 3 T13: 0.0624 T23: -0.0024 REMARK 3 L TENSOR REMARK 3 L11: 5.5981 L22: 4.3997 REMARK 3 L33: 5.3233 L12: -0.0413 REMARK 3 L13: -0.8630 L23: 1.3544 REMARK 3 S TENSOR REMARK 3 S11: 0.0999 S12: -0.8136 S13: -0.2870 REMARK 3 S21: 1.2345 S22: -0.2969 S23: 0.2107 REMARK 3 S31: 1.3628 S32: -0.8741 S33: 0.1564 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: (CHAIN B AND RESID 155:167) REMARK 3 ORIGIN FOR THE GROUP (A): 30.1503 48.6377 -7.6146 REMARK 3 T TENSOR REMARK 3 T11: 0.5824 T22: 0.5038 REMARK 3 T33: 0.7848 T12: -0.1250 REMARK 3 T13: -0.0646 T23: 0.0947 REMARK 3 L TENSOR REMARK 3 L11: 3.2293 L22: 2.9270 REMARK 3 L33: 4.4973 L12: 2.6701 REMARK 3 L13: -1.3045 L23: -1.3049 REMARK 3 S TENSOR REMARK 3 S11: -0.1616 S12: 0.3819 S13: 1.8248 REMARK 3 S21: -0.1951 S22: 0.5982 S23: 1.3027 REMARK 3 S31: -2.1740 S32: 1.0500 S33: 0.0866 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: (CHAIN B AND RESID 168:215) REMARK 3 ORIGIN FOR THE GROUP (A): 32.0382 38.9553 -6.9858 REMARK 3 T TENSOR REMARK 3 T11: 0.1795 T22: 0.4370 REMARK 3 T33: 0.2426 T12: 0.0418 REMARK 3 T13: -0.0025 T23: -0.0990 REMARK 3 L TENSOR REMARK 3 L11: 7.7672 L22: 1.6520 REMARK 3 L33: 4.7060 L12: 1.2845 REMARK 3 L13: 1.6324 L23: -0.3673 REMARK 3 S TENSOR REMARK 3 S11: 0.1664 S12: -0.1858 S13: 0.1633 REMARK 3 S21: 0.0533 S22: 0.1559 S23: -0.2584 REMARK 3 S31: 0.0891 S32: 0.8539 S33: -0.1748 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : 2 REMARK 3 NCS GROUP : 1 REMARK 3 NCS GROUP : 2 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: NULL REMARK 3 SELECTION : NULL REMARK 3 ATOM PAIRS NUMBER : NULL REMARK 3 RMSD : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4UY4 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 28-AUG-14. REMARK 100 THE DEPOSITION ID IS D_1290061614. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 17-MAY-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I03 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.976250 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PIXEL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 35908 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.860 REMARK 200 RESOLUTION RANGE LOW (A) : 28.680 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.2 REMARK 200 DATA REDUNDANCY : 3.600 REMARK 200 R MERGE (I) : 0.06000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.86 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 5.89 REMARK 200 COMPLETENESS FOR SHELL (%) : 91.8 REMARK 200 DATA REDUNDANCY IN SHELL : 3.40 REMARK 200 R MERGE FOR SHELL (I) : 0.36000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.400 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 4MZF LONGEST CHAIN POLY ALA CONVERTED REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.35 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 33% PEG3350, 0.1M HEPES PH 7.0, REMARK 280 SEEDING, 20C, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 960 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 11990 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -3.7 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1170 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 11540 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -3.9 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 128A REMARK 465 GLU A 128B REMARK 465 HIS A 128C REMARK 465 GLY A 128D REMARK 465 PRO A 188A REMARK 465 GLY A 188B REMARK 465 GLU A 188C REMARK 465 VAL A 188D REMARK 465 VAL A 188E REMARK 465 ASP A 188F REMARK 465 LYS A 237 REMARK 465 THR A 238 REMARK 465 PRO A 239 REMARK 465 PRO B 192A REMARK 465 GLY B 192B REMARK 465 GLU B 192C REMARK 465 VAL B 192D REMARK 465 VAL B 192E REMARK 465 LYS B 242 REMARK 465 THR B 243 REMARK 465 PRO B 244 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 50 CG CD CE NZ REMARK 470 ASN A 53 CG OD1 ND2 REMARK 470 GLU A 54 CG CD OE1 OE2 REMARK 470 GLU A 103 CG CD OE1 OE2 REMARK 470 ARG A 104 CG CD NE CZ NH1 NH2 REMARK 470 VAL A 105 CG1 CG2 REMARK 470 ARG A 109 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 113 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 128 CG CD OE1 OE2 REMARK 470 LYS A 130 CG CD CE NZ REMARK 470 LYS A 168 CG CD CE NZ REMARK 470 GLU A 186 CG CD OE1 OE2 REMARK 470 GLN A 187 CG CD OE1 NE2 REMARK 470 SER A 189 OG REMARK 470 LYS A 193 CE NZ REMARK 470 VAL A 236 CG1 CG2 REMARK 470 GLU B 54 CG CD OE1 OE2 REMARK 470 LYS B 93 CG CD CE NZ REMARK 470 LEU B 101 CG CD1 CD2 REMARK 470 GLU B 103 CG CD OE1 OE2 REMARK 470 ARG B 104 CG CD NE CZ NH1 NH2 REMARK 470 THR B 107 OG1 CG2 REMARK 470 ARG B 109 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 130 CG CD OE1 OE2 REMARK 470 LYS B 134 CG CD CE NZ REMARK 470 LYS B 172 CG CD CE NZ REMARK 470 GLU B 190 CG CD OE1 OE2 REMARK 470 GLU B 192 CG CD OE1 OE2 REMARK 470 ASP B 193 CG OD1 OD2 REMARK 470 LYS B 198 CE NZ REMARK 470 THR C 6 OG1 CG2 REMARK 470 THR D 6 OG1 CG2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NH1 ARG A 37 O HOH A 2002 1.86 REMARK 500 O GLY B 48 O HOH B 2003 1.96 REMARK 500 O HOH B 2041 O HOH B 2075 1.97 REMARK 500 O HOH A 2009 O HOH A 2011 1.98 REMARK 500 O TYR A 78 O HOH A 2030 2.03 REMARK 500 O HOH B 2065 O HOH B 2070 2.05 REMARK 500 NH2 ARG A 91 O HOH A 2043 2.07 REMARK 500 OG1 THR A 129 O HOH A 2061 2.08 REMARK 500 N THR A 107 O HOH A 2053 2.11 REMARK 500 N LYS A 81 O HOH A 2030 2.12 REMARK 500 N LEU B 96 O HOH B 2003 2.13 REMARK 500 O HOH B 2009 O HOH B 2024 2.16 REMARK 500 OD1 ASP A 79 O HOH A 2004 2.17 REMARK 500 OG1 THR B 166 OD2 ASP B 169 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OD1 ASP A 200 OG SER B -1 1646 2.12 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 70 76.68 -154.95 REMARK 500 VAL A 143 -62.08 64.23 REMARK 500 LYS B 70 76.50 -157.25 REMARK 500 VAL B 147 -63.28 63.18 REMARK 500 LEU B 167 -29.95 -38.84 REMARK 500 ARG C 2 120.59 60.96 REMARK 500 ARG C 2 119.98 61.88 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A2013 DISTANCE = 6.06 ANGSTROMS REMARK 525 HOH A2050 DISTANCE = 6.11 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 1237 REMARK 999 REMARK 999 SEQUENCE REMARK 999 THE MODEL CONTAINS RESIDUE T36 TO V236 DBREF 4UY4 A 36 239 UNP Q56A73 SPIN4_HUMAN 36 249 DBREF 4UY4 B 36 244 UNP Q56A73 SPIN4_HUMAN 36 249 DBREF 4UY4 C 1 6 PDB 4UY4 4UY4 1 6 DBREF 4UY4 D 1 6 PDB 4UY4 4UY4 1 6 SEQADV 4UY4 SER A -1 UNP Q56A73 EXPRESSION TAG SEQADV 4UY4 MET A 0 UNP Q56A73 EXPRESSION TAG SEQADV 4UY4 SER B -1 UNP Q56A73 EXPRESSION TAG SEQADV 4UY4 MET B 0 UNP Q56A73 EXPRESSION TAG SEQRES 1 A 216 SER MET THR ARG ARG ASN ILE VAL GLY CYS ARG ILE GLN SEQRES 2 A 216 HIS GLY TRP LYS GLU GLY ASN GLU PRO VAL GLU GLN TRP SEQRES 3 A 216 LYS GLY THR VAL LEU GLU GLN VAL SER VAL LYS PRO THR SEQRES 4 A 216 LEU TYR ILE ILE LYS TYR ASP GLY LYS ASP SER VAL TYR SEQRES 5 A 216 GLY LEU GLU LEU HIS ARG ASP LYS ARG VAL LEU ALA LEU SEQRES 6 A 216 GLU ILE LEU PRO GLU ARG VAL PRO THR PRO ARG ILE ASP SEQRES 7 A 216 SER ARG LEU ALA ASP SER LEU ILE GLY LYS ALA VAL GLU SEQRES 8 A 216 HIS VAL PHE GLU GLY GLU HIS GLY THR LYS ASP GLU TRP SEQRES 9 A 216 LYS GLY MET VAL LEU ALA ARG ALA PRO VAL MET ASP THR SEQRES 10 A 216 TRP PHE TYR ILE THR TYR GLU LYS ASP PRO VAL LEU TYR SEQRES 11 A 216 MET TYR THR LEU LEU ASP ASP TYR LYS ASP GLY ASP LEU SEQRES 12 A 216 ARG ILE ILE PRO ASP SER ASN TYR TYR PHE PRO THR ALA SEQRES 13 A 216 GLU GLN GLU PRO GLY GLU VAL VAL ASP SER LEU VAL GLY SEQRES 14 A 216 LYS GLN VAL GLU HIS ALA LYS ASP ASP GLY SER LYS ARG SEQRES 15 A 216 THR GLY ILE PHE ILE HIS GLN VAL VAL ALA LYS PRO SER SEQRES 16 A 216 VAL TYR PHE ILE LYS PHE ASP ASP ASP ILE HIS ILE TYR SEQRES 17 A 216 VAL TYR GLY LEU VAL LYS THR PRO SEQRES 1 B 216 SER MET THR ARG ARG ASN ILE VAL GLY CYS ARG ILE GLN SEQRES 2 B 216 HIS GLY TRP LYS GLU GLY ASN GLU PRO VAL GLU GLN TRP SEQRES 3 B 216 LYS GLY THR VAL LEU GLU GLN VAL SER VAL LYS PRO THR SEQRES 4 B 216 LEU TYR ILE ILE LYS TYR ASP GLY LYS ASP SER VAL TYR SEQRES 5 B 216 GLY LEU GLU LEU HIS ARG ASP LYS ARG VAL LEU ALA LEU SEQRES 6 B 216 GLU ILE LEU PRO GLU ARG VAL PRO THR PRO ARG ILE ASP SEQRES 7 B 216 SER ARG LEU ALA ASP SER LEU ILE GLY LYS ALA VAL GLU SEQRES 8 B 216 HIS VAL PHE GLU GLY GLU HIS GLY THR LYS ASP GLU TRP SEQRES 9 B 216 LYS GLY MET VAL LEU ALA ARG ALA PRO VAL MET ASP THR SEQRES 10 B 216 TRP PHE TYR ILE THR TYR GLU LYS ASP PRO VAL LEU TYR SEQRES 11 B 216 MET TYR THR LEU LEU ASP ASP TYR LYS ASP GLY ASP LEU SEQRES 12 B 216 ARG ILE ILE PRO ASP SER ASN TYR TYR PHE PRO THR ALA SEQRES 13 B 216 GLU GLN GLU PRO GLY GLU VAL VAL ASP SER LEU VAL GLY SEQRES 14 B 216 LYS GLN VAL GLU HIS ALA LYS ASP ASP GLY SER LYS ARG SEQRES 15 B 216 THR GLY ILE PHE ILE HIS GLN VAL VAL ALA LYS PRO SER SEQRES 16 B 216 VAL TYR PHE ILE LYS PHE ASP ASP ASP ILE HIS ILE TYR SEQRES 17 B 216 VAL TYR GLY LEU VAL LYS THR PRO SEQRES 1 C 6 ALA ARG THR M3L GLN THR SEQRES 1 D 6 ALA ARG THR M3L GLN THR MODRES 4UY4 M3L C 4 LYS N-TRIMETHYLLYSINE MODRES 4UY4 M3L D 4 LYS N-TRIMETHYLLYSINE HET M3L C 4 12 HET M3L D 4 12 HET GOL A1237 6 HETNAM M3L N-TRIMETHYLLYSINE HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 M3L 2(C9 H21 N2 O2 1+) FORMUL 5 GOL C3 H8 O3 FORMUL 6 HOH *196(H2 O) HELIX 1 1 ASP A 111 ILE A 119 1 9 HELIX 2 2 LEU A 163 ASP A 169 1 7 HELIX 3 3 ASP B 111 ILE B 119 1 9 HELIX 4 4 LEU B 167 ASP B 173 1 7 SHEET 1 AA 5 TYR A 85 LEU A 87 0 SHEET 2 AA 5 TYR A 74 TYR A 78 -1 O TYR A 74 N LEU A 87 SHEET 3 AA 5 GLU A 57 GLN A 66 -1 O THR A 62 N LYS A 77 SHEET 4 AA 5 ARG A 44 TRP A 49 -1 O ILE A 45 N GLY A 61 SHEET 5 AA 5 VAL A 95 LEU A 101 -1 O LEU A 96 N GLY A 48 SHEET 1 AB 5 ASP A 155 TYR A 161 0 SHEET 2 AB 5 PHE A 148 TYR A 152 -1 O PHE A 148 N TYR A 161 SHEET 3 AB 5 ASP A 131 ARG A 140 -1 O MET A 136 N THR A 151 SHEET 4 AB 5 ALA A 122 PHE A 127 -1 O VAL A 123 N GLY A 135 SHEET 5 AB 5 LEU A 172 ILE A 175 -1 O ARG A 173 N GLU A 124 SHEET 1 AC 5 THR A 184 ALA A 185 0 SHEET 2 AC 5 TYR A 231 LEU A 235 1 O GLY A 234 N ALA A 185 SHEET 3 AC 5 VAL A 219 PHE A 224 -1 O TYR A 220 N TYR A 233 SHEET 4 AC 5 LYS A 204 GLN A 212 -1 O ILE A 208 N LYS A 223 SHEET 5 AC 5 GLN A 194 ALA A 198 -1 O VAL A 195 N GLY A 207 SHEET 1 BA 5 TYR B 85 LEU B 87 0 SHEET 2 BA 5 TYR B 74 TYR B 78 -1 O TYR B 74 N LEU B 87 SHEET 3 BA 5 GLU B 57 GLN B 66 -1 O THR B 62 N LYS B 77 SHEET 4 BA 5 ARG B 44 TRP B 49 -1 O ILE B 45 N GLY B 61 SHEET 5 BA 5 VAL B 95 LEU B 101 -1 O LEU B 96 N GLY B 48 SHEET 1 BB 5 ASP B 159 TYR B 165 0 SHEET 2 BB 5 PHE B 152 TYR B 156 -1 O PHE B 152 N TYR B 165 SHEET 3 BB 5 THR B 133 ARG B 144 -1 O MET B 140 N THR B 155 SHEET 4 BB 5 ALA B 122 GLY B 129 -1 O VAL B 123 N GLY B 139 SHEET 5 BB 5 ARG D 2 THR D 3 1 O ARG D 2 N GLU B 128 SHEET 1 BC 5 ASP B 159 TYR B 165 0 SHEET 2 BC 5 PHE B 152 TYR B 156 -1 O PHE B 152 N TYR B 165 SHEET 3 BC 5 THR B 133 ARG B 144 -1 O MET B 140 N THR B 155 SHEET 4 BC 5 ALA B 122 GLY B 129 -1 O VAL B 123 N GLY B 139 SHEET 5 BC 5 LEU B 176 ILE B 179 -1 O ARG B 177 N GLU B 124 SHEET 1 DA 2 ARG D 2 THR D 3 0 SHEET 2 DA 2 ALA B 122 GLY B 129 1 O VAL B 126 N ARG D 2 SHEET 1 BD 5 THR B 188 ALA B 189 0 SHEET 2 BD 5 ILE B 235 LEU B 240 1 O GLY B 239 N ALA B 189 SHEET 3 BD 5 VAL B 224 PHE B 229 -1 O TYR B 225 N TYR B 238 SHEET 4 BD 5 LYS B 209 GLN B 217 -1 O ILE B 213 N LYS B 228 SHEET 5 BD 5 GLN B 199 ALA B 203 -1 O VAL B 200 N GLY B 212 LINK C THR C 3 N M3L C 4 1555 1555 1.33 LINK C M3L C 4 N GLN C 5 1555 1555 1.33 LINK C THR D 3 N M3L D 4 1555 1555 1.33 LINK C M3L D 4 N GLN D 5 1555 1555 1.33 CISPEP 1 GLU B 130 HIS B 131 0 6.93 SITE 1 AC1 6 GLU A 65 VAL A 67 TYR A 149 ILE A 210 SITE 2 AC1 6 HIS A 211 PHE A 221 CRYST1 39.072 51.690 57.141 81.25 89.89 88.00 P 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.025594 -0.000894 0.000088 0.00000 SCALE2 0.000000 0.019358 -0.002980 0.00000 SCALE3 0.000000 0.000000 0.017707 0.00000 MTRIX1 1 1.000000 0.000300 -0.003600 17.77730 1 MTRIX2 1 0.000200 -1.000000 -0.004400 28.54500 1 MTRIX3 1 -0.003600 0.004400 -1.000000 21.15810 1