HEADER STRUCTURAL PROTEIN 05-SEP-14 4UZM TITLE SHOTGUN PROTEOLYSIS: A PRACTICAL APPLICATION COMPND MOL_ID: 1; COMPND 2 MOLECULE: PUTATIVE MEMBRANE PROTEIN IGAA HOMOLOG; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: YRFF; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 562; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 6 EXPRESSION_SYSTEM_VECTOR: MODIFIED PRSETA KEYWDS STRUCTURAL PROTEIN EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR M.D.ALLEN,M.BYCROFT,S.M.V.FREUND,D.CHRIST REVDAT 5 27-APR-16 4UZM 1 ATOM TER MASTER REVDAT 4 21-OCT-15 4UZM 1 JRNL REVDAT 3 29-APR-15 4UZM 1 JRNL MASTER REVDAT 2 24-SEP-14 4UZM 1 ATOM REVDAT 1 17-SEP-14 4UZM 0 JRNL AUTH M.D.ALLEN,M.CHRISTIE,P.JONES,B.T.POREBSKI,B.ROOME, JRNL AUTH 2 S.M.FREUND,A.M.BUCKLE,M.BYCROFT,D.CHRIST JRNL TITL SOLUTION STRUCTURE OF A SOLUBLE FRAGMENT DERIVED FROM A JRNL TITL 2 MEMBRANE PROTEIN BY SHOTGUN PROTEOLYSIS. JRNL REF PROTEIN ENG.DES.SEL. V. 28 445 2015 JRNL REFN ISSN 1741-0126 JRNL PMID 25877662 JRNL DOI 10.1093/PROTEIN/GZV021 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU,READ, REMARK 3 RICE,SIMONSON,WARREN REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4UZM COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 08-SEP-14. REMARK 100 THE PDBE ID CODE IS EBI-61708. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 293.0 REMARK 210 PH : 6.5 REMARK 210 IONIC STRENGTH : 120MM REMARK 210 PRESSURE : NULL REMARK 210 SAMPLE CONTENTS : 95% WATER/5% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : NULL REMARK 210 SPECTROMETER FIELD STRENGTH : NULL REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : ANSIG, CNS REMARK 210 METHOD USED : CNS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 20 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : NO VIOLATIONS REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NONE REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 465 SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 MODELS 1-20 REMARK 465 RES C SSSEQI REMARK 465 MET A 35 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 VAL A 66 91.08 42.31 REMARK 500 1 SER A 73 81.63 60.72 REMARK 500 1 ALA A 74 40.25 -151.65 REMARK 500 1 PRO A 76 -172.25 -53.70 REMARK 500 1 ILE A 100 -42.84 -157.68 REMARK 500 1 PRO A 105 86.43 -34.05 REMARK 500 1 ASP A 113 -123.49 66.69 REMARK 500 1 ASN A 128 -168.36 -103.53 REMARK 500 1 SER A 140 -76.97 -119.71 REMARK 500 1 ASN A 148 99.91 -44.66 REMARK 500 2 PRO A 67 -160.81 -61.87 REMARK 500 2 PRO A 69 -175.59 -55.20 REMARK 500 2 PRO A 76 -174.46 -52.80 REMARK 500 2 PRO A 105 86.99 -34.02 REMARK 500 2 ASP A 113 -124.18 66.22 REMARK 500 2 ASN A 128 -169.18 -103.61 REMARK 500 2 SER A 140 -72.23 -125.20 REMARK 500 2 ASN A 148 99.51 -42.49 REMARK 500 3 GLN A 65 -177.93 -69.07 REMARK 500 3 VAL A 66 85.52 -150.94 REMARK 500 3 SER A 73 27.93 -152.03 REMARK 500 3 ALA A 74 134.48 -178.11 REMARK 500 3 ILE A 100 16.93 -145.52 REMARK 500 3 PRO A 105 83.17 -35.57 REMARK 500 3 ASP A 113 -123.59 65.82 REMARK 500 3 ASN A 128 -168.86 -104.51 REMARK 500 3 SER A 140 -71.71 -124.82 REMARK 500 3 ASN A 148 100.44 -47.95 REMARK 500 4 GLN A 65 -81.58 -146.05 REMARK 500 4 VAL A 66 75.09 40.28 REMARK 500 4 PRO A 67 -174.31 -60.89 REMARK 500 4 THR A 70 164.80 59.59 REMARK 500 4 SER A 73 42.61 -176.84 REMARK 500 4 PRO A 76 170.19 -59.29 REMARK 500 4 PRO A 105 87.53 -33.07 REMARK 500 4 ASP A 113 -122.75 66.99 REMARK 500 4 ASN A 128 -168.34 -102.00 REMARK 500 4 SER A 140 -69.87 -121.06 REMARK 500 4 ASN A 148 99.62 -44.90 REMARK 500 4 GLN A 153 75.99 -118.47 REMARK 500 5 PRO A 69 -177.83 -69.14 REMARK 500 5 THR A 70 81.32 -64.32 REMARK 500 5 ALA A 75 -60.56 -176.93 REMARK 500 5 ILE A 100 12.81 -141.59 REMARK 500 5 PRO A 105 86.34 -33.73 REMARK 500 5 ASP A 113 -124.68 65.48 REMARK 500 5 ASN A 128 -168.36 -102.37 REMARK 500 5 SER A 140 -72.45 -114.12 REMARK 500 5 ASN A 148 99.68 -44.84 REMARK 500 5 GLN A 153 77.00 -112.03 REMARK 500 REMARK 500 THIS ENTRY HAS 191 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4UZW RELATED DB: PDB REMARK 900 HIGH-RESOLUTION NMR STRUCTURES OF THE DOMAINS OF REMARK 900 SACCHEROMYCES CEREVISIAE THO1 REMARK 900 RELATED ID: 4UZX RELATED DB: PDB REMARK 900 HIGH-RESOLUTION NMR STRUCTURES OF THE DOMAINS OF REMARK 900 SACCHEROMYCES CEREVISIAE THO1 DBREF 4UZM A 36 154 UNP P45800 IGAA_ECOLI 36 154 SEQADV 4UZM MET A 35 UNP P45800 EXPRESSION TAG SEQRES 1 A 120 MET ALA PHE ALA ASP ALA GLN THR ARG LYS LEU THR PRO SEQRES 2 A 120 GLU GLU ARG SER ALA VAL GLU ASN TYR LEU GLU SER LEU SEQRES 3 A 120 THR GLN VAL LEU GLN VAL PRO GLY PRO THR GLY ALA SER SEQRES 4 A 120 ALA ALA PRO ILE SER LEU ALA LEU ASN ALA GLU SER ASN SEQRES 5 A 120 ASN VAL MET MET LEU THR HIS ALA ILE THR ARG TYR GLY SEQRES 6 A 120 ILE SER THR ASP ASP PRO ASN LYS TRP ARG TYR TYR LEU SEQRES 7 A 120 ASP SER VAL GLU VAL HIS LEU PRO PRO PHE TRP GLU GLN SEQRES 8 A 120 TYR ILE ASN ASP GLU ASN THR VAL GLU LEU ILE HIS THR SEQRES 9 A 120 ASP SER LEU PRO LEU VAL ILE SER LEU ASN GLY HIS THR SEQRES 10 A 120 LEU GLN GLU HELIX 1 1 THR A 46 VAL A 63 1 18 HELIX 2 2 ASN A 82 SER A 85 5 4 SHEET 1 AA 5 GLN A 41 LYS A 44 0 SHEET 2 AA 5 ASN A 87 HIS A 93 -1 O VAL A 88 N ARG A 43 SHEET 3 AA 5 ASN A 131 HIS A 137 -1 O ASN A 131 N HIS A 93 SHEET 4 AA 5 PRO A 142 LEU A 147 -1 O LEU A 143 N ILE A 136 SHEET 5 AA 5 HIS A 150 THR A 151 -1 O HIS A 150 N LEU A 147 SHEET 1 AB 3 ILE A 95 TYR A 98 0 SHEET 2 AB 3 ARG A 109 LEU A 112 -1 O ARG A 109 N TYR A 98 SHEET 3 AB 3 VAL A 115 VAL A 117 -1 O VAL A 115 N LEU A 112 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1