data_4V1K # _entry.id 4V1K # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.287 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 4V1K PDBE EBI-61873 WWPDB D_1290061873 # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.content_type _pdbx_database_related.details PDB 4V17 unspecified 'STRUCTURE OF A NOVEL CARBOHYDRATE BINDING MODULE FROM GLYCOSIDE HYDROLASE FAMILY 5 GLUCANASE FROM RUMINOCOCCUS FLAVEFACIENS FD-1' PDB 4V18 unspecified ;SEMET STRUCTURE OF A NOVEL CARBOHYDRATE BINDING MODULE FROM GLYCOSIDE HYDROLASE FAMILY 5 GLUCANASE FROM RUMINOCOCCUS FLAVEFACIENS FD-1 ; PDB 4V1B unspecified ;STRUCTURE OF A NOVEL CARBOHYDRATE BINDING MODULE FROM GLYCOSIDE HYDROLASE FAMILY 5 GLUCANASE FROM RUMINOCOCCUS FLAVEFACIENS FD-1 COLLECTED AT THE ZN EDGE ; PDB 4V1I unspecified ;STRUCTURE OF A NOVEL CARBOHYDRATE BINDING MODULE FROM GLYCOSIDE HYDROLASE FAMILY 5 GLUCANASE FROM RUMINOCOCCUS FLAVEFACIENS FD-1 AT MEDIUM RESOLUTION ; PDB 4V1L unspecified ;HIGH RESOLUTION STRUCTURE OF A NOVEL CARBOHYDRATE BINDING MODULE FROM GLYCOSIDE HYDROLASE FAMILY 9 (CEL9A ) FROM RUMINOCOCCUS FLAVEFACIENS FD-1 ; # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4V1K _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.SG_entry . _pdbx_database_status.recvd_initial_deposition_date 2014-09-29 _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Venditto, I.' 1 ? 'Goyal, A.' 2 ? 'Thompson, A.' 3 ? 'Ferreira, L.M.A.' 4 ? 'Fontes, C.M.G.A.' 5 ? 'Najmudin, S.' 6 ? # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary 'Complexity of the Ruminococcus Flavefaciens Cellulosome Reflects an Expansion in Glycan Recognition.' Proc.Natl.Acad.Sci.USA 113 7136 ? 2016 PNASA6 US 0027-8424 0040 ? 27298375 10.1073/PNAS.1601558113 1 'Expression, Purification and Crystallization of a Novel Carbohydrate-Binding Module from the Ruminococcus Flavefaciens Cellulosome.' 'Acta Crystallogr.,Sect.F' 70 1653 ? 2014 ? DK 1744-3091 ? ? 25484220 10.1107/S2053230X14024248 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Venditto, I.' 1 primary 'Luis, A.S.' 2 primary 'Rydahl, M.' 3 primary 'Schuckel, J.' 4 primary 'Fernandes, V.O.' 5 primary 'Vidal-Melgosa, S.' 6 primary 'Bule, P.' 7 primary 'Goyal, A.' 8 primary 'Pires, V.M.R.' 9 primary 'Dourado, C.G.' 10 primary 'Ferreira, L.M.A.' 11 primary 'Coutinho, P.M.' 12 primary 'Henrissat, B.' 13 primary 'Knox, J.P.' 14 primary 'Basle, A.' 15 primary 'Najmudin, S.' 16 primary 'Gilbert, H.J.' 17 primary 'Willats, W.G.T.' 18 primary 'Fontes, C.M.G.A.' 19 1 'Venditto, I.' 20 1 'Centeno, M.S.J.' 21 1 'Ferreira, L.M.A.' 22 1 'Fontes, C.M.G.A.' 23 1 'Najmudin, S.' 24 # _cell.entry_id 4V1K _cell.length_a 104.051 _cell.length_b 104.051 _cell.length_c 104.051 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4V1K _symmetry.space_group_name_H-M 'I 21 3' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 199 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'CARBOHYDRATE BINDING MODULE' 15470.633 1 ? ? 'RESIDUES 492-629' 'SELENOMETHIONINE DERIVATIVE' 2 non-polymer syn 'NONAETHYLENE GLYCOL' 414.488 1 ? ? ? ? 3 non-polymer syn 'HEXAETHYLENE GLYCOL' 282.331 1 ? ? ? ? 4 non-polymer syn 'CALCIUM ION' 40.078 3 ? ? ? ? 5 non-polymer syn '2-HYDROXY BUTANE-1,4-DIOL' 105.112 1 ? ? ? ? 6 water nat water 18.015 144 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;(MSE)ASDGYTIKPNKKVTYSALGEDER(MSE)IGFSYKDFGISSSEKITEVQVNISANKNIGKYVGQFGTSTTDSANGY WA(MSE)GDEITQSISGNSGTITWKVPSDISSIIQTQYGGEIKFGVWWIDCDEFTIDSVVLKLEHHHHHH ; _entity_poly.pdbx_seq_one_letter_code_can ;MASDGYTIKPNKKVTYSALGEDERMIGFSYKDFGISSSEKITEVQVNISANKNIGKYVGQFGTSTTDSANGYWAMGDEIT QSISGNSGTITWKVPSDISSIIQTQYGGEIKFGVWWIDCDEFTIDSVVLKLEHHHHHH ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MSE n 1 2 ALA n 1 3 SER n 1 4 ASP n 1 5 GLY n 1 6 TYR n 1 7 THR n 1 8 ILE n 1 9 LYS n 1 10 PRO n 1 11 ASN n 1 12 LYS n 1 13 LYS n 1 14 VAL n 1 15 THR n 1 16 TYR n 1 17 SER n 1 18 ALA n 1 19 LEU n 1 20 GLY n 1 21 GLU n 1 22 ASP n 1 23 GLU n 1 24 ARG n 1 25 MSE n 1 26 ILE n 1 27 GLY n 1 28 PHE n 1 29 SER n 1 30 TYR n 1 31 LYS n 1 32 ASP n 1 33 PHE n 1 34 GLY n 1 35 ILE n 1 36 SER n 1 37 SER n 1 38 SER n 1 39 GLU n 1 40 LYS n 1 41 ILE n 1 42 THR n 1 43 GLU n 1 44 VAL n 1 45 GLN n 1 46 VAL n 1 47 ASN n 1 48 ILE n 1 49 SER n 1 50 ALA n 1 51 ASN n 1 52 LYS n 1 53 ASN n 1 54 ILE n 1 55 GLY n 1 56 LYS n 1 57 TYR n 1 58 VAL n 1 59 GLY n 1 60 GLN n 1 61 PHE n 1 62 GLY n 1 63 THR n 1 64 SER n 1 65 THR n 1 66 THR n 1 67 ASP n 1 68 SER n 1 69 ALA n 1 70 ASN n 1 71 GLY n 1 72 TYR n 1 73 TRP n 1 74 ALA n 1 75 MSE n 1 76 GLY n 1 77 ASP n 1 78 GLU n 1 79 ILE n 1 80 THR n 1 81 GLN n 1 82 SER n 1 83 ILE n 1 84 SER n 1 85 GLY n 1 86 ASN n 1 87 SER n 1 88 GLY n 1 89 THR n 1 90 ILE n 1 91 THR n 1 92 TRP n 1 93 LYS n 1 94 VAL n 1 95 PRO n 1 96 SER n 1 97 ASP n 1 98 ILE n 1 99 SER n 1 100 SER n 1 101 ILE n 1 102 ILE n 1 103 GLN n 1 104 THR n 1 105 GLN n 1 106 TYR n 1 107 GLY n 1 108 GLY n 1 109 GLU n 1 110 ILE n 1 111 LYS n 1 112 PHE n 1 113 GLY n 1 114 VAL n 1 115 TRP n 1 116 TRP n 1 117 ILE n 1 118 ASP n 1 119 CYS n 1 120 ASP n 1 121 GLU n 1 122 PHE n 1 123 THR n 1 124 ILE n 1 125 ASP n 1 126 SER n 1 127 VAL n 1 128 VAL n 1 129 LEU n 1 130 LYS n 1 131 LEU n 1 132 GLU n 1 133 HIS n 1 134 HIS n 1 135 HIS n 1 136 HIS n 1 137 HIS n 1 138 HIS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain FD-1 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'RUMINOCOCCUS FLAVEFACIENS' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 641112 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant B834 _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector PET-28A _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 4V1K _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_db_accession 4V1K _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 4V1K _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 138 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 4V1K _struct_ref_seq.db_align_beg 492 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 629 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 492 _struct_ref_seq.pdbx_auth_seq_align_end 629 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 2PE non-polymer . 'NONAETHYLENE GLYCOL' ? 'C18 H38 O10' 414.488 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 BGQ non-polymer . '2-HYDROXY BUTANE-1,4-DIOL' ? 'C4 H9 O3' 105.112 CA non-polymer . 'CALCIUM ION' ? 'Ca 2' 40.078 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 P6G non-polymer . 'HEXAETHYLENE GLYCOL' 'POLYETHYLENE GLYCOL PEG400' 'C12 H26 O7' 282.331 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 4V1K _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.89 _exptl_crystal.density_percent_sol 58 _exptl_crystal.description 'DATA WAS ALSO COLLECTED AT THE SE-PEAK EDGE WITH AN INVERSE BEAM.' _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.0 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details '0.2 M AMMONIUM ACETATE, 1.5 M K2HPO4, 1.5 M NAH2PO4 CRYO USED WAS PARATONE-N., pH 7.0' # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector PIXEL _diffrn_detector.type 'DECTRIS PILATUS 6M' _diffrn_detector.pdbx_collection_date 2013-07-18 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.95372 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'SOLEIL BEAMLINE PROXIMA 1' _diffrn_source.pdbx_synchrotron_site SOLEIL _diffrn_source.pdbx_synchrotron_beamline 'PROXIMA 1' _diffrn_source.pdbx_wavelength 0.95372 _diffrn_source.pdbx_wavelength_list ? # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 4V1K _reflns.observed_criterion_sigma_I 0.0 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 42.48 _reflns.d_resolution_high 1.60 _reflns.number_obs 24839 _reflns.number_all ? _reflns.percent_possible_obs 100.0 _reflns.pdbx_Rmerge_I_obs 0.09 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 14.50 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 11.2 # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 1.60 _reflns_shell.d_res_low 1.69 _reflns_shell.percent_possible_all 100.0 _reflns_shell.Rmerge_I_obs 1.50 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 1.30 _reflns_shell.pdbx_redundancy 11.1 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 4V1K _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 22809 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F . _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 42.48 _refine.ls_d_res_high 1.60 _refine.ls_percent_reflns_obs 98.50 _refine.ls_R_factor_obs 0.11986 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.11747 _refine.ls_R_factor_R_free 0.15221 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 6.8 _refine.ls_number_reflns_R_free 1653 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.979 _refine.correlation_coeff_Fo_to_Fc_free 0.974 _refine.B_iso_mean 26.386 _refine.aniso_B[1][1] 0.00 _refine.aniso_B[2][2] 0.00 _refine.aniso_B[3][3] 0.00 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.30 _refine.pdbx_solvent_ion_probe_radii 0.70 _refine.pdbx_solvent_shrinkage_radii 0.70 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model NONE _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.064 _refine.pdbx_overall_ESU_R_Free 0.059 _refine.overall_SU_ML 0.037 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 2.383 _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1016 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 56 _refine_hist.number_atoms_solvent 144 _refine_hist.number_atoms_total 1216 _refine_hist.d_res_high 1.60 _refine_hist.d_res_low 42.48 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.014 0.020 ? 1149 'X-RAY DIFFRACTION' ? r_bond_other_d 0.001 0.020 ? 1081 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.713 1.970 ? 1549 'X-RAY DIFFRACTION' ? r_angle_other_deg 0.833 3.000 ? 2530 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 6.649 5.000 ? 150 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 39.063 26.250 ? 48 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 13.577 15.000 ? 191 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 37.546 15.000 ? 1 'X-RAY DIFFRACTION' ? r_chiral_restr 0.114 0.200 ? 168 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.007 0.020 ? 1271 'X-RAY DIFFRACTION' ? r_gen_planes_other 0.002 0.020 ? 244 'X-RAY DIFFRACTION' ? r_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 1.998 2.119 ? 546 'X-RAY DIFFRACTION' ? r_mcbond_other 1.974 2.113 ? 545 'X-RAY DIFFRACTION' ? r_mcangle_it 2.747 3.193 ? 687 'X-RAY DIFFRACTION' ? r_mcangle_other 2.756 3.202 ? 688 'X-RAY DIFFRACTION' ? r_scbond_it 3.064 2.729 ? 602 'X-RAY DIFFRACTION' ? r_scbond_other 3.064 2.732 ? 603 'X-RAY DIFFRACTION' ? r_scangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? r_scangle_other 3.662 3.841 ? 854 'X-RAY DIFFRACTION' ? r_long_range_B_refined 4.632 19.837 ? 1314 'X-RAY DIFFRACTION' ? r_long_range_B_other 4.628 19.838 ? 1314 'X-RAY DIFFRACTION' ? r_rigid_bond_restr 3.792 3.000 ? 2228 'X-RAY DIFFRACTION' ? r_sphericity_free 22.299 5.000 ? 46 'X-RAY DIFFRACTION' ? r_sphericity_bonded 10.936 5.000 ? 2301 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.600 _refine_ls_shell.d_res_low 1.642 _refine_ls_shell.number_reflns_R_work 1591 _refine_ls_shell.R_factor_R_work 0.153 _refine_ls_shell.percent_reflns_obs 94.72 _refine_ls_shell.R_factor_R_free 0.204 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 114 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? # _struct.entry_id 4V1K _struct.title ;SeMet structure of a novel carbohydrate binding module from glycoside hydrolase family 9 (Cel9A) from Ruminococcus flavefaciens FD-1 ; _struct.pdbx_descriptor 'CARBOHYDRATE BINDING MODULE' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4V1K _struct_keywords.pdbx_keywords 'SUGAR BINDING PROTEIN' _struct_keywords.text ;SUGAR BINDING PROTEIN, CARBOHYDRATE BINDING MODULE, GLYCOSIDE HYDROLASE FAMILY 9, CEL9A, CELLULOSOME, RUMINOCOCCUS FLAVEFACIENS FD-1 ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 4 ? F N N 4 ? G N N 5 ? H N N 6 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 17 ? LEU A 19 ? SER A 508 LEU A 510 5 ? 3 HELX_P HELX_P2 2 GLY A 20 ? GLU A 23 ? GLY A 511 GLU A 514 5 ? 4 HELX_P HELX_P3 3 LYS A 31 ? PHE A 33 ? LYS A 522 PHE A 524 5 ? 3 HELX_P HELX_P4 4 ASP A 67 ? GLY A 71 ? ASP A 558 GLY A 562 5 ? 5 HELX_P HELX_P5 5 PRO A 95 ? SER A 100 ? PRO A 586 SER A 591 1 ? 6 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale1 covale ? ? A ARG 24 C ? ? ? 1_555 A MSE 25 N ? ? A ARG 515 A MSE 516 1_555 ? ? ? ? ? ? ? 1.326 ? covale2 covale ? ? A MSE 25 C ? ? ? 1_555 A ILE 26 N ? ? A MSE 516 A ILE 517 1_555 ? ? ? ? ? ? ? 1.315 ? covale3 covale ? ? A ALA 74 C ? ? ? 1_555 A MSE 75 N ? ? A ALA 565 A MSE 566 1_555 ? ? ? ? ? ? ? 1.332 ? covale4 covale ? ? A MSE 75 C ? ? ? 1_555 A GLY 76 N ? ? A MSE 566 A GLY 567 1_555 ? ? ? ? ? ? ? 1.338 ? metalc1 metalc ? ? B 2PE . O13 ? ? ? 1_555 D CA . CA ? ? A 2PE 1625 A CA 1627 1_555 ? ? ? ? ? ? ? 2.800 ? metalc2 metalc ? ? B 2PE . O16 ? ? ? 1_555 D CA . CA ? ? A 2PE 1625 A CA 1627 1_555 ? ? ? ? ? ? ? 2.733 ? metalc3 metalc ? ? B 2PE . O19 ? ? ? 1_555 D CA . CA ? ? A 2PE 1625 A CA 1627 1_555 ? ? ? ? ? ? ? 2.708 ? metalc4 metalc ? ? B 2PE . O22 ? ? ? 1_555 D CA . CA ? ? A 2PE 1625 A CA 1627 1_555 ? ? ? ? ? ? ? 2.859 ? metalc5 metalc ? ? B 2PE . O10 ? ? ? 1_555 D CA . CA ? ? A 2PE 1625 A CA 1627 1_555 ? ? ? ? ? ? ? 2.802 ? covale5 covale ? ? B 2PE . C2 ? ? ? 1_555 C P6G . O19 ? ? A 2PE 1625 A P6G 1626 1_555 ? ? ? ? ? ? ? 1.342 ? metalc6 metalc ? ? B 2PE . O4 ? ? ? 1_555 D CA . CA ? ? A 2PE 1625 A CA 1627 1_555 ? ? ? ? ? ? ? 2.792 ? metalc7 metalc ? ? B 2PE . O7 ? ? ? 1_555 D CA . CA ? ? A 2PE 1625 A CA 1627 1_555 ? ? ? ? ? ? ? 2.736 ? metalc8 metalc ? ? C P6G . O13 ? ? ? 1_555 E CA . CA ? ? A P6G 1626 A CA 1628 1_555 ? ? ? ? ? ? ? 2.714 ? metalc9 metalc ? ? C P6G . O16 ? ? ? 1_555 E CA . CA ? ? A P6G 1626 A CA 1628 1_555 ? ? ? ? ? ? ? 2.819 ? metalc10 metalc ? ? C P6G . O10 ? ? ? 1_555 E CA . CA ? ? A P6G 1626 A CA 1628 1_555 ? ? ? ? ? ? ? 3.162 ? metalc11 metalc ? ? C P6G . O7 ? ? ? 1_555 E CA . CA ? ? A P6G 1626 A CA 1628 1_555 ? ? ? ? ? ? ? 3.180 ? metalc12 metalc ? ? C P6G . O4 ? ? ? 1_555 E CA . CA ? ? A P6G 1626 A CA 1628 1_555 ? ? ? ? ? ? ? 2.532 ? metalc13 metalc ? ? C P6G . O1 ? ? ? 1_555 E CA . CA ? ? A P6G 1626 A CA 1628 1_555 ? ? ? ? ? ? ? 3.091 ? metalc14 metalc ? ? D CA . CA ? ? ? 1_555 H HOH . O ? ? A CA 1627 A HOH 2074 1_555 ? ? ? ? ? ? ? 2.824 ? metalc15 metalc ? ? E CA . CA ? ? ? 1_555 H HOH . O ? ? A CA 1628 A HOH 2144 1_555 ? ? ? ? ? ? ? 3.104 ? metalc16 metalc ? ? E CA . CA ? ? ? 1_555 H HOH . O ? ? A CA 1628 A HOH 2143 1_555 ? ? ? ? ? ? ? 3.180 ? metalc17 metalc ? ? F CA . CA ? ? ? 1_555 G BGQ . O1 ? ? A CA 1629 A BGQ 1630 8_656 ? ? ? ? ? ? ? 2.855 ? metalc18 metalc ? ? F CA . CA ? ? ? 1_555 G BGQ . O1 ? ? A CA 1629 A BGQ 1630 11_466 ? ? ? ? ? ? ? 2.853 ? metalc19 metalc ? ? F CA . CA ? ? ? 11_466 G BGQ . O1 ? ? A CA 1629 A BGQ 1630 1_555 ? ? ? ? ? ? ? 2.855 ? metalc20 metalc ? ? F CA . CA ? ? ? 8_656 G BGQ . O1 ? ? A CA 1629 A BGQ 1630 1_555 ? ? ? ? ? ? ? 2.853 ? metalc21 metalc ? ? F CA . CA ? ? ? 1_555 G BGQ . O1 ? ? A CA 1629 A BGQ 1630 1_555 ? ? ? ? ? ? ? 2.853 ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA ? 2 ? AB ? 2 ? AC ? 4 ? AD ? 4 ? AE ? 4 ? AF ? 4 ? AG ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA 1 2 ? anti-parallel AB 1 2 ? parallel AC 1 2 ? anti-parallel AC 2 3 ? anti-parallel AC 3 4 ? parallel AD 1 2 ? anti-parallel AD 2 3 ? anti-parallel AD 3 4 ? anti-parallel AE 1 2 ? anti-parallel AE 2 3 ? anti-parallel AE 3 4 ? anti-parallel AF 1 2 ? anti-parallel AF 2 3 ? anti-parallel AF 3 4 ? anti-parallel AG 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA 1 GLY A 5 ? ILE A 8 ? GLY A 496 ILE A 499 AA 2 GLU A 121 ? LEU A 131 ? GLU A 612 LEU A 622 AB 1 LYS A 12 ? THR A 15 ? LYS A 503 THR A 506 AB 2 GLU A 121 ? LEU A 131 ? GLU A 612 LEU A 622 AC 1 SER A 87 ? LYS A 93 ? SER A 578 LYS A 584 AC 2 ILE A 41 ? SER A 49 ? ILE A 532 SER A 540 AC 3 GLU A 121 ? LEU A 131 ? GLU A 612 LEU A 622 AC 4 LYS A 12 ? THR A 15 ? LYS A 503 THR A 506 AD 1 SER A 87 ? LYS A 93 ? SER A 578 LYS A 584 AD 2 ILE A 41 ? SER A 49 ? ILE A 532 SER A 540 AD 3 GLU A 121 ? LEU A 131 ? GLU A 612 LEU A 622 AD 4 GLY A 5 ? ILE A 8 ? GLY A 496 ILE A 499 AE 1 MSE A 25 ? SER A 29 ? MSE A 516 SER A 520 AE 2 GLU A 109 ? ILE A 117 ? GLU A 600 ILE A 608 AE 3 GLY A 55 ? SER A 64 ? GLY A 546 SER A 555 AE 4 TRP A 73 ? MSE A 75 ? TRP A 564 MSE A 566 AF 1 MSE A 25 ? SER A 29 ? MSE A 516 SER A 520 AF 2 GLU A 109 ? ILE A 117 ? GLU A 600 ILE A 608 AF 3 GLY A 55 ? SER A 64 ? GLY A 546 SER A 555 AF 4 ILE A 79 ? ILE A 83 ? ILE A 570 ILE A 574 AG 1 TRP A 73 ? MSE A 75 ? TRP A 564 MSE A 566 AG 2 GLY A 55 ? SER A 64 ? GLY A 546 SER A 555 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA 1 2 N ILE A 8 ? N ILE A 499 O VAL A 127 ? O VAL A 618 AB 1 2 N VAL A 14 ? N VAL A 505 O PHE A 122 ? O PHE A 613 AC 1 2 N TRP A 92 ? N TRP A 583 O VAL A 44 ? O VAL A 535 AC 2 3 N SER A 49 ? N SER A 540 O THR A 123 ? O THR A 614 AC 3 4 N ILE A 124 ? N ILE A 615 O LYS A 12 ? O LYS A 503 AD 1 2 N TRP A 92 ? N TRP A 583 O VAL A 44 ? O VAL A 535 AD 2 3 N SER A 49 ? N SER A 540 O THR A 123 ? O THR A 614 AD 3 4 N LEU A 129 ? N LEU A 620 O TYR A 6 ? O TYR A 497 AE 1 2 N PHE A 28 ? N PHE A 519 O ILE A 110 ? O ILE A 601 AE 2 3 N TRP A 115 ? N TRP A 606 O VAL A 58 ? O VAL A 549 AE 3 4 N THR A 63 ? N THR A 554 O ALA A 74 ? O ALA A 565 AF 1 2 N PHE A 28 ? N PHE A 519 O ILE A 110 ? O ILE A 601 AF 2 3 N TRP A 115 ? N TRP A 606 O VAL A 58 ? O VAL A 549 AF 3 4 N GLY A 59 ? N GLY A 550 O ILE A 79 ? O ILE A 570 AG 1 2 N ALA A 74 ? N ALA A 565 O THR A 63 ? O THR A 554 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 2 'BINDING SITE FOR RESIDUE CA A 1627' AC2 Software ? ? ? ? 1 'BINDING SITE FOR RESIDUE CA A 1628' AC3 Software ? ? ? ? 3 'BINDING SITE FOR RESIDUE CA A 1629' AC4 Software ? ? ? ? 4 'BINDING SITE FOR RESIDUE BGQ A 1630' AC5 Software ? ? ? ? 13 'Binding site for residues 2PE A1625 and P6G A1626' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 2 2PE B . ? 2PE A 1625 . ? 1_555 ? 2 AC1 2 HOH H . ? HOH A 2074 . ? 1_555 ? 3 AC2 1 P6G C . ? P6G A 1626 . ? 1_555 ? 4 AC3 3 BGQ G . ? BGQ A 1630 . ? 11_466 ? 5 AC3 3 BGQ G . ? BGQ A 1630 . ? 1_555 ? 6 AC3 3 BGQ G . ? BGQ A 1630 . ? 8_656 ? 7 AC4 4 TRP A 116 ? TRP A 607 . ? 11_466 ? 8 AC4 4 CA F . ? CA A 1629 . ? 8_656 ? 9 AC4 4 CA F . ? CA A 1629 . ? 11_466 ? 10 AC4 4 CA F . ? CA A 1629 . ? 1_555 ? 11 AC5 13 GLU A 21 ? GLU A 512 . ? 14_665 ? 12 AC5 13 ASP A 22 ? ASP A 513 . ? 14_665 ? 13 AC5 13 SER A 64 ? SER A 555 . ? 1_555 ? 14 AC5 13 GLY A 71 ? GLY A 562 . ? 1_555 ? 15 AC5 13 TYR A 72 ? TYR A 563 . ? 1_555 ? 16 AC5 13 TRP A 73 ? TRP A 564 . ? 1_555 ? 17 AC5 13 TYR A 106 ? TYR A 597 . ? 1_555 ? 18 AC5 13 GLY A 107 ? GLY A 598 . ? 1_555 ? 19 AC5 13 CA D . ? CA A 1627 . ? 1_555 ? 20 AC5 13 CA E . ? CA A 1628 . ? 1_555 ? 21 AC5 13 HOH H . ? HOH A 2075 . ? 1_555 ? 22 AC5 13 HOH H . ? HOH A 2143 . ? 1_555 ? 23 AC5 13 HOH H . ? HOH A 2144 . ? 1_555 ? # _database_PDB_matrix.entry_id 4V1K _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 4V1K _atom_sites.fract_transf_matrix[1][1] 0.009611 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.009611 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.009611 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CA N O S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MSE 1 492 ? ? ? A . n A 1 2 ALA 2 493 ? ? ? A . n A 1 3 SER 3 494 494 SER SER A . n A 1 4 ASP 4 495 495 ASP ASP A . n A 1 5 GLY 5 496 496 GLY GLY A . n A 1 6 TYR 6 497 497 TYR TYR A . n A 1 7 THR 7 498 498 THR THR A . n A 1 8 ILE 8 499 499 ILE ILE A . n A 1 9 LYS 9 500 500 LYS LYS A . n A 1 10 PRO 10 501 501 PRO PRO A . n A 1 11 ASN 11 502 502 ASN ASN A . n A 1 12 LYS 12 503 503 LYS LYS A . n A 1 13 LYS 13 504 504 LYS LYS A . n A 1 14 VAL 14 505 505 VAL VAL A . n A 1 15 THR 15 506 506 THR THR A . n A 1 16 TYR 16 507 507 TYR TYR A . n A 1 17 SER 17 508 508 SER SER A . n A 1 18 ALA 18 509 509 ALA ALA A . n A 1 19 LEU 19 510 510 LEU LEU A . n A 1 20 GLY 20 511 511 GLY GLY A . n A 1 21 GLU 21 512 512 GLU GLU A . n A 1 22 ASP 22 513 513 ASP ASP A . n A 1 23 GLU 23 514 514 GLU GLU A . n A 1 24 ARG 24 515 515 ARG ARG A . n A 1 25 MSE 25 516 516 MSE MSE A . n A 1 26 ILE 26 517 517 ILE ILE A . n A 1 27 GLY 27 518 518 GLY GLY A . n A 1 28 PHE 28 519 519 PHE PHE A . n A 1 29 SER 29 520 520 SER SER A . n A 1 30 TYR 30 521 521 TYR TYR A . n A 1 31 LYS 31 522 522 LYS LYS A . n A 1 32 ASP 32 523 523 ASP ASP A . n A 1 33 PHE 33 524 524 PHE PHE A . n A 1 34 GLY 34 525 525 GLY GLY A . n A 1 35 ILE 35 526 526 ILE ILE A . n A 1 36 SER 36 527 527 SER SER A . n A 1 37 SER 37 528 528 SER SER A . n A 1 38 SER 38 529 529 SER SER A . n A 1 39 GLU 39 530 530 GLU GLU A . n A 1 40 LYS 40 531 531 LYS LYS A . n A 1 41 ILE 41 532 532 ILE ILE A . n A 1 42 THR 42 533 533 THR THR A . n A 1 43 GLU 43 534 534 GLU GLU A . n A 1 44 VAL 44 535 535 VAL VAL A . n A 1 45 GLN 45 536 536 GLN GLN A . n A 1 46 VAL 46 537 537 VAL VAL A . n A 1 47 ASN 47 538 538 ASN ASN A . n A 1 48 ILE 48 539 539 ILE ILE A . n A 1 49 SER 49 540 540 SER SER A . n A 1 50 ALA 50 541 541 ALA ALA A . n A 1 51 ASN 51 542 542 ASN ASN A . n A 1 52 LYS 52 543 543 LYS LYS A . n A 1 53 ASN 53 544 544 ASN ASN A . n A 1 54 ILE 54 545 545 ILE ILE A . n A 1 55 GLY 55 546 546 GLY GLY A . n A 1 56 LYS 56 547 547 LYS LYS A . n A 1 57 TYR 57 548 548 TYR TYR A . n A 1 58 VAL 58 549 549 VAL VAL A . n A 1 59 GLY 59 550 550 GLY GLY A . n A 1 60 GLN 60 551 551 GLN GLN A . n A 1 61 PHE 61 552 552 PHE PHE A . n A 1 62 GLY 62 553 553 GLY GLY A . n A 1 63 THR 63 554 554 THR THR A . n A 1 64 SER 64 555 555 SER SER A . n A 1 65 THR 65 556 556 THR THR A . n A 1 66 THR 66 557 557 THR THR A . n A 1 67 ASP 67 558 558 ASP ASP A . n A 1 68 SER 68 559 559 SER SER A . n A 1 69 ALA 69 560 560 ALA ALA A . n A 1 70 ASN 70 561 561 ASN ASN A . n A 1 71 GLY 71 562 562 GLY GLY A . n A 1 72 TYR 72 563 563 TYR TYR A . n A 1 73 TRP 73 564 564 TRP TRP A . n A 1 74 ALA 74 565 565 ALA ALA A . n A 1 75 MSE 75 566 566 MSE MSE A . n A 1 76 GLY 76 567 567 GLY GLY A . n A 1 77 ASP 77 568 568 ASP ASP A . n A 1 78 GLU 78 569 569 GLU GLU A . n A 1 79 ILE 79 570 570 ILE ILE A . n A 1 80 THR 80 571 571 THR THR A . n A 1 81 GLN 81 572 572 GLN GLN A . n A 1 82 SER 82 573 573 SER SER A . n A 1 83 ILE 83 574 574 ILE ILE A . n A 1 84 SER 84 575 575 SER SER A . n A 1 85 GLY 85 576 576 GLY GLY A . n A 1 86 ASN 86 577 577 ASN ASN A . n A 1 87 SER 87 578 578 SER SER A . n A 1 88 GLY 88 579 579 GLY GLY A . n A 1 89 THR 89 580 580 THR THR A . n A 1 90 ILE 90 581 581 ILE ILE A . n A 1 91 THR 91 582 582 THR THR A . n A 1 92 TRP 92 583 583 TRP TRP A . n A 1 93 LYS 93 584 584 LYS LYS A . n A 1 94 VAL 94 585 585 VAL VAL A . n A 1 95 PRO 95 586 586 PRO PRO A . n A 1 96 SER 96 587 587 SER SER A . n A 1 97 ASP 97 588 588 ASP ASP A . n A 1 98 ILE 98 589 589 ILE ILE A . n A 1 99 SER 99 590 590 SER SER A . n A 1 100 SER 100 591 591 SER SER A . n A 1 101 ILE 101 592 592 ILE ILE A . n A 1 102 ILE 102 593 593 ILE ILE A . n A 1 103 GLN 103 594 594 GLN GLN A . n A 1 104 THR 104 595 595 THR THR A . n A 1 105 GLN 105 596 596 GLN GLN A . n A 1 106 TYR 106 597 597 TYR TYR A . n A 1 107 GLY 107 598 598 GLY GLY A . n A 1 108 GLY 108 599 599 GLY GLY A . n A 1 109 GLU 109 600 600 GLU GLU A . n A 1 110 ILE 110 601 601 ILE ILE A . n A 1 111 LYS 111 602 602 LYS LYS A . n A 1 112 PHE 112 603 603 PHE PHE A . n A 1 113 GLY 113 604 604 GLY GLY A . n A 1 114 VAL 114 605 605 VAL VAL A . n A 1 115 TRP 115 606 606 TRP TRP A . n A 1 116 TRP 116 607 607 TRP TRP A . n A 1 117 ILE 117 608 608 ILE ILE A . n A 1 118 ASP 118 609 609 ASP ASP A . n A 1 119 CYS 119 610 610 CYS CYS A . n A 1 120 ASP 120 611 611 ASP ASP A . n A 1 121 GLU 121 612 612 GLU GLU A . n A 1 122 PHE 122 613 613 PHE PHE A . n A 1 123 THR 123 614 614 THR THR A . n A 1 124 ILE 124 615 615 ILE ILE A . n A 1 125 ASP 125 616 616 ASP ASP A . n A 1 126 SER 126 617 617 SER SER A . n A 1 127 VAL 127 618 618 VAL VAL A . n A 1 128 VAL 128 619 619 VAL VAL A . n A 1 129 LEU 129 620 620 LEU LEU A . n A 1 130 LYS 130 621 621 LYS LYS A . n A 1 131 LEU 131 622 622 LEU LEU A . n A 1 132 GLU 132 623 623 GLU GLU A . n A 1 133 HIS 133 624 624 HIS HIS A . n A 1 134 HIS 134 625 ? ? ? A . n A 1 135 HIS 135 626 ? ? ? A . n A 1 136 HIS 136 627 ? ? ? A . n A 1 137 HIS 137 628 ? ? ? A . n A 1 138 HIS 138 629 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 2PE 1 1625 1625 2PE 2PE A . C 3 P6G 1 1626 1626 P6G P6G A . D 4 CA 1 1627 1627 CA CA A . E 4 CA 1 1628 1628 CA CA A . F 4 CA 1 1629 1629 CA CA A . G 5 BGQ 1 1630 1630 BGQ BGQ A . H 6 HOH 1 2001 2001 HOH HOH A . H 6 HOH 2 2002 2002 HOH HOH A . H 6 HOH 3 2003 2003 HOH HOH A . H 6 HOH 4 2004 2004 HOH HOH A . H 6 HOH 5 2005 2005 HOH HOH A . H 6 HOH 6 2006 2006 HOH HOH A . H 6 HOH 7 2007 2007 HOH HOH A . H 6 HOH 8 2008 2008 HOH HOH A . H 6 HOH 9 2009 2009 HOH HOH A . H 6 HOH 10 2010 2010 HOH HOH A . H 6 HOH 11 2011 2011 HOH HOH A . H 6 HOH 12 2012 2012 HOH HOH A . H 6 HOH 13 2013 2013 HOH HOH A . H 6 HOH 14 2014 2014 HOH HOH A . H 6 HOH 15 2015 2015 HOH HOH A . H 6 HOH 16 2016 2016 HOH HOH A . H 6 HOH 17 2017 2017 HOH HOH A . H 6 HOH 18 2018 2018 HOH HOH A . H 6 HOH 19 2019 2019 HOH HOH A . H 6 HOH 20 2020 2020 HOH HOH A . H 6 HOH 21 2021 2021 HOH HOH A . H 6 HOH 22 2022 2022 HOH HOH A . H 6 HOH 23 2023 2023 HOH HOH A . H 6 HOH 24 2024 2024 HOH HOH A . H 6 HOH 25 2025 2025 HOH HOH A . H 6 HOH 26 2026 2026 HOH HOH A . H 6 HOH 27 2027 2027 HOH HOH A . H 6 HOH 28 2028 2028 HOH HOH A . H 6 HOH 29 2029 2029 HOH HOH A . H 6 HOH 30 2030 2030 HOH HOH A . H 6 HOH 31 2031 2031 HOH HOH A . H 6 HOH 32 2032 2032 HOH HOH A . H 6 HOH 33 2033 2033 HOH HOH A . H 6 HOH 34 2034 2034 HOH HOH A . H 6 HOH 35 2035 2035 HOH HOH A . H 6 HOH 36 2036 2036 HOH HOH A . H 6 HOH 37 2037 2037 HOH HOH A . H 6 HOH 38 2038 2038 HOH HOH A . H 6 HOH 39 2039 2039 HOH HOH A . H 6 HOH 40 2040 2040 HOH HOH A . H 6 HOH 41 2041 2041 HOH HOH A . H 6 HOH 42 2042 2042 HOH HOH A . H 6 HOH 43 2043 2043 HOH HOH A . H 6 HOH 44 2044 2044 HOH HOH A . H 6 HOH 45 2045 2045 HOH HOH A . H 6 HOH 46 2046 2046 HOH HOH A . H 6 HOH 47 2047 2047 HOH HOH A . H 6 HOH 48 2048 2048 HOH HOH A . H 6 HOH 49 2049 2049 HOH HOH A . H 6 HOH 50 2050 2050 HOH HOH A . H 6 HOH 51 2051 2051 HOH HOH A . H 6 HOH 52 2052 2052 HOH HOH A . H 6 HOH 53 2053 2053 HOH HOH A . H 6 HOH 54 2054 2054 HOH HOH A . H 6 HOH 55 2055 2055 HOH HOH A . H 6 HOH 56 2056 2056 HOH HOH A . H 6 HOH 57 2057 2057 HOH HOH A . H 6 HOH 58 2058 2058 HOH HOH A . H 6 HOH 59 2059 2059 HOH HOH A . H 6 HOH 60 2060 2060 HOH HOH A . H 6 HOH 61 2061 2061 HOH HOH A . H 6 HOH 62 2062 2062 HOH HOH A . H 6 HOH 63 2063 2063 HOH HOH A . H 6 HOH 64 2064 2064 HOH HOH A . H 6 HOH 65 2065 2065 HOH HOH A . H 6 HOH 66 2066 2066 HOH HOH A . H 6 HOH 67 2067 2067 HOH HOH A . H 6 HOH 68 2068 2068 HOH HOH A . H 6 HOH 69 2069 2069 HOH HOH A . H 6 HOH 70 2070 2070 HOH HOH A . H 6 HOH 71 2071 2071 HOH HOH A . H 6 HOH 72 2072 2072 HOH HOH A . H 6 HOH 73 2073 2073 HOH HOH A . H 6 HOH 74 2074 2074 HOH HOH A . H 6 HOH 75 2075 2075 HOH HOH A . H 6 HOH 76 2076 2076 HOH HOH A . H 6 HOH 77 2077 2077 HOH HOH A . H 6 HOH 78 2078 2078 HOH HOH A . H 6 HOH 79 2079 2079 HOH HOH A . H 6 HOH 80 2080 2080 HOH HOH A . H 6 HOH 81 2081 2081 HOH HOH A . H 6 HOH 82 2082 2082 HOH HOH A . H 6 HOH 83 2083 2083 HOH HOH A . H 6 HOH 84 2084 2084 HOH HOH A . H 6 HOH 85 2085 2085 HOH HOH A . H 6 HOH 86 2086 2086 HOH HOH A . H 6 HOH 87 2087 2087 HOH HOH A . H 6 HOH 88 2088 2088 HOH HOH A . H 6 HOH 89 2089 2089 HOH HOH A . H 6 HOH 90 2090 2090 HOH HOH A . H 6 HOH 91 2091 2091 HOH HOH A . H 6 HOH 92 2092 2092 HOH HOH A . H 6 HOH 93 2093 2093 HOH HOH A . H 6 HOH 94 2094 2094 HOH HOH A . H 6 HOH 95 2095 2095 HOH HOH A . H 6 HOH 96 2096 2096 HOH HOH A . H 6 HOH 97 2097 2097 HOH HOH A . H 6 HOH 98 2098 2098 HOH HOH A . H 6 HOH 99 2099 2099 HOH HOH A . H 6 HOH 100 2100 2100 HOH HOH A . H 6 HOH 101 2101 2101 HOH HOH A . H 6 HOH 102 2102 2102 HOH HOH A . H 6 HOH 103 2103 2103 HOH HOH A . H 6 HOH 104 2104 2104 HOH HOH A . H 6 HOH 105 2105 2105 HOH HOH A . H 6 HOH 106 2106 2106 HOH HOH A . H 6 HOH 107 2107 2107 HOH HOH A . H 6 HOH 108 2108 2108 HOH HOH A . H 6 HOH 109 2109 2109 HOH HOH A . H 6 HOH 110 2110 2110 HOH HOH A . H 6 HOH 111 2111 2111 HOH HOH A . H 6 HOH 112 2112 2112 HOH HOH A . H 6 HOH 113 2113 2113 HOH HOH A . H 6 HOH 114 2114 2114 HOH HOH A . H 6 HOH 115 2115 2115 HOH HOH A . H 6 HOH 116 2116 2116 HOH HOH A . H 6 HOH 117 2117 2117 HOH HOH A . H 6 HOH 118 2118 2118 HOH HOH A . H 6 HOH 119 2119 2119 HOH HOH A . H 6 HOH 120 2120 2120 HOH HOH A . H 6 HOH 121 2121 2121 HOH HOH A . H 6 HOH 122 2122 2122 HOH HOH A . H 6 HOH 123 2123 2123 HOH HOH A . H 6 HOH 124 2124 2124 HOH HOH A . H 6 HOH 125 2125 2125 HOH HOH A . H 6 HOH 126 2126 2126 HOH HOH A . H 6 HOH 127 2127 2127 HOH HOH A . H 6 HOH 128 2128 2128 HOH HOH A . H 6 HOH 129 2129 2129 HOH HOH A . H 6 HOH 130 2130 2130 HOH HOH A . H 6 HOH 131 2131 2131 HOH HOH A . H 6 HOH 132 2132 2132 HOH HOH A . H 6 HOH 133 2133 2133 HOH HOH A . H 6 HOH 134 2134 2134 HOH HOH A . H 6 HOH 135 2135 2135 HOH HOH A . H 6 HOH 136 2136 2136 HOH HOH A . H 6 HOH 137 2137 2137 HOH HOH A . H 6 HOH 138 2138 2138 HOH HOH A . H 6 HOH 139 2139 2139 HOH HOH A . H 6 HOH 140 2140 2140 HOH HOH A . H 6 HOH 141 2141 2141 HOH HOH A . H 6 HOH 142 2142 2142 HOH HOH A . H 6 HOH 143 2143 2143 HOH HOH A . H 6 HOH 144 2144 2144 HOH HOH A . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 25 A MSE 516 ? MET SELENOMETHIONINE 2 A MSE 75 A MSE 566 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 A CA 1629 ? F CA . 2 1 A HOH 2009 ? H HOH . 3 1 A HOH 2085 ? H HOH . 4 1 A HOH 2086 ? H HOH . # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O13 ? B 2PE . ? A 2PE 1625 ? 1_555 CA ? D CA . ? A CA 1627 ? 1_555 O16 ? B 2PE . ? A 2PE 1625 ? 1_555 61.7 ? 2 O13 ? B 2PE . ? A 2PE 1625 ? 1_555 CA ? D CA . ? A CA 1627 ? 1_555 O19 ? B 2PE . ? A 2PE 1625 ? 1_555 117.8 ? 3 O16 ? B 2PE . ? A 2PE 1625 ? 1_555 CA ? D CA . ? A CA 1627 ? 1_555 O19 ? B 2PE . ? A 2PE 1625 ? 1_555 58.9 ? 4 O13 ? B 2PE . ? A 2PE 1625 ? 1_555 CA ? D CA . ? A CA 1627 ? 1_555 O22 ? B 2PE . ? A 2PE 1625 ? 1_555 98.5 ? 5 O16 ? B 2PE . ? A 2PE 1625 ? 1_555 CA ? D CA . ? A CA 1627 ? 1_555 O22 ? B 2PE . ? A 2PE 1625 ? 1_555 84.8 ? 6 O19 ? B 2PE . ? A 2PE 1625 ? 1_555 CA ? D CA . ? A CA 1627 ? 1_555 O22 ? B 2PE . ? A 2PE 1625 ? 1_555 60.1 ? 7 O13 ? B 2PE . ? A 2PE 1625 ? 1_555 CA ? D CA . ? A CA 1627 ? 1_555 O10 ? B 2PE . ? A 2PE 1625 ? 1_555 61.6 ? 8 O16 ? B 2PE . ? A 2PE 1625 ? 1_555 CA ? D CA . ? A CA 1627 ? 1_555 O10 ? B 2PE . ? A 2PE 1625 ? 1_555 122.5 ? 9 O19 ? B 2PE . ? A 2PE 1625 ? 1_555 CA ? D CA . ? A CA 1627 ? 1_555 O10 ? B 2PE . ? A 2PE 1625 ? 1_555 172.8 ? 10 O22 ? B 2PE . ? A 2PE 1625 ? 1_555 CA ? D CA . ? A CA 1627 ? 1_555 O10 ? B 2PE . ? A 2PE 1625 ? 1_555 112.7 ? 11 O13 ? B 2PE . ? A 2PE 1625 ? 1_555 CA ? D CA . ? A CA 1627 ? 1_555 O4 ? B 2PE . ? A 2PE 1625 ? 1_555 156.4 ? 12 O16 ? B 2PE . ? A 2PE 1625 ? 1_555 CA ? D CA . ? A CA 1627 ? 1_555 O4 ? B 2PE . ? A 2PE 1625 ? 1_555 121.0 ? 13 O19 ? B 2PE . ? A 2PE 1625 ? 1_555 CA ? D CA . ? A CA 1627 ? 1_555 O4 ? B 2PE . ? A 2PE 1625 ? 1_555 76.1 ? 14 O22 ? B 2PE . ? A 2PE 1625 ? 1_555 CA ? D CA . ? A CA 1627 ? 1_555 O4 ? B 2PE . ? A 2PE 1625 ? 1_555 105.0 ? 15 O10 ? B 2PE . ? A 2PE 1625 ? 1_555 CA ? D CA . ? A CA 1627 ? 1_555 O4 ? B 2PE . ? A 2PE 1625 ? 1_555 107.1 ? 16 O13 ? B 2PE . ? A 2PE 1625 ? 1_555 CA ? D CA . ? A CA 1627 ? 1_555 O7 ? B 2PE . ? A 2PE 1625 ? 1_555 118.2 ? 17 O16 ? B 2PE . ? A 2PE 1625 ? 1_555 CA ? D CA . ? A CA 1627 ? 1_555 O7 ? B 2PE . ? A 2PE 1625 ? 1_555 168.0 ? 18 O19 ? B 2PE . ? A 2PE 1625 ? 1_555 CA ? D CA . ? A CA 1627 ? 1_555 O7 ? B 2PE . ? A 2PE 1625 ? 1_555 116.0 ? 19 O22 ? B 2PE . ? A 2PE 1625 ? 1_555 CA ? D CA . ? A CA 1627 ? 1_555 O7 ? B 2PE . ? A 2PE 1625 ? 1_555 83.4 ? 20 O10 ? B 2PE . ? A 2PE 1625 ? 1_555 CA ? D CA . ? A CA 1627 ? 1_555 O7 ? B 2PE . ? A 2PE 1625 ? 1_555 61.1 ? 21 O4 ? B 2PE . ? A 2PE 1625 ? 1_555 CA ? D CA . ? A CA 1627 ? 1_555 O7 ? B 2PE . ? A 2PE 1625 ? 1_555 64.5 ? 22 O13 ? B 2PE . ? A 2PE 1625 ? 1_555 CA ? D CA . ? A CA 1627 ? 1_555 O ? H HOH . ? A HOH 2074 ? 1_555 76.3 ? 23 O16 ? B 2PE . ? A 2PE 1625 ? 1_555 CA ? D CA . ? A CA 1627 ? 1_555 O ? H HOH . ? A HOH 2074 ? 1_555 82.8 ? 24 O19 ? B 2PE . ? A 2PE 1625 ? 1_555 CA ? D CA . ? A CA 1627 ? 1_555 O ? H HOH . ? A HOH 2074 ? 1_555 112.0 ? 25 O22 ? B 2PE . ? A 2PE 1625 ? 1_555 CA ? D CA . ? A CA 1627 ? 1_555 O ? H HOH . ? A HOH 2074 ? 1_555 167.6 ? 26 O10 ? B 2PE . ? A 2PE 1625 ? 1_555 CA ? D CA . ? A CA 1627 ? 1_555 O ? H HOH . ? A HOH 2074 ? 1_555 75.1 ? 27 O4 ? B 2PE . ? A 2PE 1625 ? 1_555 CA ? D CA . ? A CA 1627 ? 1_555 O ? H HOH . ? A HOH 2074 ? 1_555 80.8 ? 28 O7 ? B 2PE . ? A 2PE 1625 ? 1_555 CA ? D CA . ? A CA 1627 ? 1_555 O ? H HOH . ? A HOH 2074 ? 1_555 109.0 ? 29 O13 ? C P6G . ? A P6G 1626 ? 1_555 CA ? E CA . ? A CA 1628 ? 1_555 O16 ? C P6G . ? A P6G 1626 ? 1_555 61.9 ? 30 O13 ? C P6G . ? A P6G 1626 ? 1_555 CA ? E CA . ? A CA 1628 ? 1_555 O10 ? C P6G . ? A P6G 1626 ? 1_555 63.3 ? 31 O16 ? C P6G . ? A P6G 1626 ? 1_555 CA ? E CA . ? A CA 1628 ? 1_555 O10 ? C P6G . ? A P6G 1626 ? 1_555 97.8 ? 32 O13 ? C P6G . ? A P6G 1626 ? 1_555 CA ? E CA . ? A CA 1628 ? 1_555 O7 ? C P6G . ? A P6G 1626 ? 1_555 124.9 ? 33 O16 ? C P6G . ? A P6G 1626 ? 1_555 CA ? E CA . ? A CA 1628 ? 1_555 O7 ? C P6G . ? A P6G 1626 ? 1_555 120.6 ? 34 O10 ? C P6G . ? A P6G 1626 ? 1_555 CA ? E CA . ? A CA 1628 ? 1_555 O7 ? C P6G . ? A P6G 1626 ? 1_555 61.9 ? 35 O13 ? C P6G . ? A P6G 1626 ? 1_555 CA ? E CA . ? A CA 1628 ? 1_555 O4 ? C P6G . ? A P6G 1626 ? 1_555 169.6 ? 36 O16 ? C P6G . ? A P6G 1626 ? 1_555 CA ? E CA . ? A CA 1628 ? 1_555 O4 ? C P6G . ? A P6G 1626 ? 1_555 108.9 ? 37 O10 ? C P6G . ? A P6G 1626 ? 1_555 CA ? E CA . ? A CA 1628 ? 1_555 O4 ? C P6G . ? A P6G 1626 ? 1_555 115.8 ? 38 O7 ? C P6G . ? A P6G 1626 ? 1_555 CA ? E CA . ? A CA 1628 ? 1_555 O4 ? C P6G . ? A P6G 1626 ? 1_555 54.1 ? 39 O13 ? C P6G . ? A P6G 1626 ? 1_555 CA ? E CA . ? A CA 1628 ? 1_555 O1 ? C P6G . ? A P6G 1626 ? 1_555 120.6 ? 40 O16 ? C P6G . ? A P6G 1626 ? 1_555 CA ? E CA . ? A CA 1628 ? 1_555 O1 ? C P6G . ? A P6G 1626 ? 1_555 94.0 ? 41 O10 ? C P6G . ? A P6G 1626 ? 1_555 CA ? E CA . ? A CA 1628 ? 1_555 O1 ? C P6G . ? A P6G 1626 ? 1_555 167.8 ? 42 O7 ? C P6G . ? A P6G 1626 ? 1_555 CA ? E CA . ? A CA 1628 ? 1_555 O1 ? C P6G . ? A P6G 1626 ? 1_555 114.2 ? 43 O4 ? C P6G . ? A P6G 1626 ? 1_555 CA ? E CA . ? A CA 1628 ? 1_555 O1 ? C P6G . ? A P6G 1626 ? 1_555 62.7 ? 44 O13 ? C P6G . ? A P6G 1626 ? 1_555 CA ? E CA . ? A CA 1628 ? 1_555 O ? H HOH . ? A HOH 2144 ? 1_555 71.0 ? 45 O16 ? C P6G . ? A P6G 1626 ? 1_555 CA ? E CA . ? A CA 1628 ? 1_555 O ? H HOH . ? A HOH 2144 ? 1_555 48.5 ? 46 O10 ? C P6G . ? A P6G 1626 ? 1_555 CA ? E CA . ? A CA 1628 ? 1_555 O ? H HOH . ? A HOH 2144 ? 1_555 58.7 ? 47 O7 ? C P6G . ? A P6G 1626 ? 1_555 CA ? E CA . ? A CA 1628 ? 1_555 O ? H HOH . ? A HOH 2144 ? 1_555 76.4 ? 48 O4 ? C P6G . ? A P6G 1626 ? 1_555 CA ? E CA . ? A CA 1628 ? 1_555 O ? H HOH . ? A HOH 2144 ? 1_555 99.5 ? 49 O1 ? C P6G . ? A P6G 1626 ? 1_555 CA ? E CA . ? A CA 1628 ? 1_555 O ? H HOH . ? A HOH 2144 ? 1_555 133.0 ? 50 O13 ? C P6G . ? A P6G 1626 ? 1_555 CA ? E CA . ? A CA 1628 ? 1_555 O ? H HOH . ? A HOH 2143 ? 1_555 85.0 ? 51 O16 ? C P6G . ? A P6G 1626 ? 1_555 CA ? E CA . ? A CA 1628 ? 1_555 O ? H HOH . ? A HOH 2143 ? 1_555 51.5 ? 52 O10 ? C P6G . ? A P6G 1626 ? 1_555 CA ? E CA . ? A CA 1628 ? 1_555 O ? H HOH . ? A HOH 2143 ? 1_555 145.1 ? 53 O7 ? C P6G . ? A P6G 1626 ? 1_555 CA ? E CA . ? A CA 1628 ? 1_555 O ? H HOH . ? A HOH 2143 ? 1_555 143.9 ? 54 O4 ? C P6G . ? A P6G 1626 ? 1_555 CA ? E CA . ? A CA 1628 ? 1_555 O ? H HOH . ? A HOH 2143 ? 1_555 92.7 ? 55 O1 ? C P6G . ? A P6G 1626 ? 1_555 CA ? E CA . ? A CA 1628 ? 1_555 O ? H HOH . ? A HOH 2143 ? 1_555 44.8 ? 56 O ? H HOH . ? A HOH 2144 ? 1_555 CA ? E CA . ? A CA 1628 ? 1_555 O ? H HOH . ? A HOH 2143 ? 1_555 98.7 ? 57 O1 ? G BGQ . ? A BGQ 1630 ? 8_656 CA ? F CA . ? A CA 1629 ? 1_555 O1 ? G BGQ . ? A BGQ 1630 ? 11_466 43.7 ? 58 O1 ? G BGQ . ? A BGQ 1630 ? 8_656 CA ? F CA . ? A CA 1629 ? 1_555 O1 ? G BGQ . ? A BGQ 1630 ? 1_555 43.7 ? 59 O1 ? G BGQ . ? A BGQ 1630 ? 11_466 CA ? F CA . ? A CA 1629 ? 1_555 O1 ? G BGQ . ? A BGQ 1630 ? 1_555 43.7 ? 60 O1 ? G BGQ . ? A BGQ 1630 ? 8_656 CA ? F CA . ? A CA 1629 ? 1_555 O1 ? G BGQ . ? A BGQ 1630 ? 1_555 43.7 ? 61 O1 ? G BGQ . ? A BGQ 1630 ? 11_466 CA ? F CA . ? A CA 1629 ? 1_555 O1 ? G BGQ . ? A BGQ 1630 ? 1_555 43.7 ? 62 O1 ? G BGQ . ? A BGQ 1630 ? 1_555 CA ? F CA . ? A CA 1629 ? 1_555 O1 ? G BGQ . ? A BGQ 1630 ? 1_555 0.0 ? 63 O1 ? G BGQ . ? A BGQ 1630 ? 8_656 CA ? F CA . ? A CA 1629 ? 1_555 O1 ? G BGQ . ? A BGQ 1630 ? 1_555 43.7 ? 64 O1 ? G BGQ . ? A BGQ 1630 ? 11_466 CA ? F CA . ? A CA 1629 ? 1_555 O1 ? G BGQ . ? A BGQ 1630 ? 1_555 43.7 ? 65 O1 ? G BGQ . ? A BGQ 1630 ? 1_555 CA ? F CA . ? A CA 1629 ? 1_555 O1 ? G BGQ . ? A BGQ 1630 ? 1_555 0.0 ? 66 O1 ? G BGQ . ? A BGQ 1630 ? 1_555 CA ? F CA . ? A CA 1629 ? 1_555 O1 ? G BGQ . ? A BGQ 1630 ? 1_555 0.0 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2016-01-20 2 'Structure model' 1 1 2016-06-29 3 'Structure model' 1 2 2016-07-13 4 'Structure model' 1 3 2018-02-07 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Database references' 3 4 'Structure model' 'Database references' 4 4 'Structure model' 'Refinement description' 5 4 'Structure model' 'Source and taxonomy' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' citation 2 4 'Structure model' entity_src_gen 3 4 'Structure model' software # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_citation.year' 2 4 'Structure model' '_entity_src_gen.pdbx_host_org_ncbi_taxonomy_id' 3 4 'Structure model' '_entity_src_gen.pdbx_host_org_scientific_name' 4 4 'Structure model' '_entity_src_gen.pdbx_host_org_strain' 5 4 'Structure model' '_entity_src_gen.pdbx_host_org_variant' 6 4 'Structure model' '_entity_src_gen.pdbx_host_org_vector' 7 4 'Structure model' '_entity_src_gen.plasmid_name' 8 4 'Structure model' '_software.name' # _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls.id 1 _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x 43.6473 _pdbx_refine_tls.origin_y 66.4378 _pdbx_refine_tls.origin_z 76.4152 _pdbx_refine_tls.T[1][1] 0.0014 _pdbx_refine_tls.T[2][2] 0.0006 _pdbx_refine_tls.T[3][3] 0.0014 _pdbx_refine_tls.T[1][2] -0.0002 _pdbx_refine_tls.T[1][3] -0.0001 _pdbx_refine_tls.T[2][3] -0.0002 _pdbx_refine_tls.L[1][1] 0.1106 _pdbx_refine_tls.L[2][2] 0.0544 _pdbx_refine_tls.L[3][3] 0.1217 _pdbx_refine_tls.L[1][2] 0.0223 _pdbx_refine_tls.L[1][3] -0.0869 _pdbx_refine_tls.L[2][3] -0.0237 _pdbx_refine_tls.S[1][1] -0.0078 _pdbx_refine_tls.S[1][2] 0.0028 _pdbx_refine_tls.S[1][3] -0.0083 _pdbx_refine_tls.S[2][1] -0.0015 _pdbx_refine_tls.S[2][2] 0.0051 _pdbx_refine_tls.S[2][3] 0.0002 _pdbx_refine_tls.S[3][1] 0.0077 _pdbx_refine_tls.S[3][2] 0.0000 _pdbx_refine_tls.S[3][3] 0.0027 # _pdbx_refine_tls_group.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls_group.id 1 _pdbx_refine_tls_group.refine_tls_id 1 _pdbx_refine_tls_group.beg_auth_asym_id A _pdbx_refine_tls_group.beg_auth_seq_id 494 _pdbx_refine_tls_group.beg_label_asym_id ? _pdbx_refine_tls_group.beg_label_seq_id ? _pdbx_refine_tls_group.end_auth_asym_id A _pdbx_refine_tls_group.end_auth_seq_id 624 _pdbx_refine_tls_group.end_label_asym_id ? _pdbx_refine_tls_group.end_label_seq_id ? _pdbx_refine_tls_group.selection ? _pdbx_refine_tls_group.selection_details ? # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal _software.date _software.type _software.location _software.language MOSFLM 'data reduction' . ? 1 ? ? ? ? Aimless 'data scaling' . ? 2 ? ? ? ? XDS 'data scaling' . ? 3 ? ? ? ? SHELXDE phasing . ? 4 ? ? ? ? CCP4 phasing SUITES ? 5 ? ? ? ? REFMAC refinement 5.8.0073 ? 6 ? ? ? ? # _pdbx_entry_details.entry_id 4V1K _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details 'SELENOMETHIONINE DERIVATIVE' # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O A HOH 2100 ? ? O A HOH 2101 ? ? 1.89 2 1 O A HOH 2134 ? ? O A HOH 2135 ? ? 1.93 3 1 O A HOH 2049 ? ? O A HOH 2124 ? ? 2.03 4 1 O A HOH 2083 ? ? O A HOH 2084 ? ? 2.04 5 1 OE1 A GLN 572 ? ? O A HOH 2104 ? ? 2.14 6 1 O A SER 508 ? ? O A HOH 2023 ? ? 2.15 # loop_ _pdbx_validate_symm_contact.id _pdbx_validate_symm_contact.PDB_model_num _pdbx_validate_symm_contact.auth_atom_id_1 _pdbx_validate_symm_contact.auth_asym_id_1 _pdbx_validate_symm_contact.auth_comp_id_1 _pdbx_validate_symm_contact.auth_seq_id_1 _pdbx_validate_symm_contact.PDB_ins_code_1 _pdbx_validate_symm_contact.label_alt_id_1 _pdbx_validate_symm_contact.site_symmetry_1 _pdbx_validate_symm_contact.auth_atom_id_2 _pdbx_validate_symm_contact.auth_asym_id_2 _pdbx_validate_symm_contact.auth_comp_id_2 _pdbx_validate_symm_contact.auth_seq_id_2 _pdbx_validate_symm_contact.PDB_ins_code_2 _pdbx_validate_symm_contact.label_alt_id_2 _pdbx_validate_symm_contact.site_symmetry_2 _pdbx_validate_symm_contact.dist 1 1 O A HOH 2023 ? ? 1_555 O A HOH 2100 ? ? 8_656 1.42 2 1 O1 A BGQ 1630 ? ? 1_555 O1 A BGQ 1630 ? ? 8_656 2.12 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 CB A ASP 558 ? A CG A ASP 558 ? A OD1 A ASP 558 ? A 125.55 118.30 7.25 0.90 N 2 1 CB A ASP 558 ? A CG A ASP 558 ? A OD2 A ASP 558 ? A 109.84 118.30 -8.46 0.90 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 GLU A 623 ? A -96.30 -92.54 2 1 GLU A 623 ? B -86.67 -108.73 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MSE 492 ? A MSE 1 2 1 Y 1 A ALA 493 ? A ALA 2 3 1 Y 1 A HIS 625 ? A HIS 134 4 1 Y 1 A HIS 626 ? A HIS 135 5 1 Y 1 A HIS 627 ? A HIS 136 6 1 Y 1 A HIS 628 ? A HIS 137 7 1 Y 1 A HIS 629 ? A HIS 138 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'NONAETHYLENE GLYCOL' 2PE 3 'HEXAETHYLENE GLYCOL' P6G 4 'CALCIUM ION' CA 5 '2-HYDROXY BUTANE-1,4-DIOL' BGQ 6 water HOH #