HEADER TRANSFERASE 28-AUG-14 4W9X TITLE CRYSTAL STRUCTURE OF BMP-2-INDUCIBLE KINASE IN COMPLEX WITH TITLE 2 BARICITINIB COMPND MOL_ID: 1; COMPND 2 MOLECULE: BMP-2-INDUCIBLE PROTEIN KINASE; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 38-345; COMPND 5 SYNONYM: BIKE; COMPND 6 EC: 2.7.11.1; COMPND 7 ENGINEERED: YES; COMPND 8 MUTATION: YES; COMPND 9 OTHER_DETAILS: KINASE DOMAIN WITH TWO SURFACE ENTROPY MUTATIONS COMPND 10 (K320A, K321A) SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: BMP2K, BIKE, HRIHFB2017; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_VARIANT: R3-PRARE2; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PNIC-ZB KEYWDS KINASE, SMALL-MOLECULE, CATALYTIC DOMAIN, PROTEIN BINDING, INHIBITOR, KEYWDS 2 STRUCTURAL GENOMICS, STRUCTURAL GENOMICS CONSORTIUM, SGC, KEYWDS 3 TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR F.J.SORRELL,J.M.ELKINS,T.KROJER,E.WILLIAMS,P.SAVITSKY,F.VON DELFT, AUTHOR 2 C.H.ARROWSMITH,A.M.EDWARDS,C.BOUNTRA,S.KNAPP,STRUCTURAL GENOMICS AUTHOR 3 CONSORTIUM (SGC) REVDAT 5 08-MAY-24 4W9X 1 REMARK REVDAT 4 24-JAN-18 4W9X 1 AUTHOR REVDAT 3 09-MAR-16 4W9X 1 JRNL REVDAT 2 02-MAR-16 4W9X 1 JRNL REVDAT 1 10-SEP-14 4W9X 0 JRNL AUTH F.J.SORRELL,M.SZKLARZ,K.R.ABDUL AZEEZ,J.M.ELKINS,S.KNAPP JRNL TITL FAMILY-WIDE STRUCTURAL ANALYSIS OF HUMAN NUMB-ASSOCIATED JRNL TITL 2 PROTEIN KINASES. JRNL REF STRUCTURE V. 24 401 2016 JRNL REFN ISSN 0969-2126 JRNL PMID 26853940 JRNL DOI 10.1016/J.STR.2015.12.015 REMARK 2 REMARK 2 RESOLUTION. 2.14 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0073 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.14 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 92.12 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.0 REMARK 3 NUMBER OF REFLECTIONS : 20634 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.189 REMARK 3 R VALUE (WORKING SET) : 0.187 REMARK 3 FREE R VALUE : 0.229 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1078 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.14 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.20 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1488 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.30 REMARK 3 BIN R VALUE (WORKING SET) : 0.2680 REMARK 3 BIN FREE R VALUE SET COUNT : 80 REMARK 3 BIN FREE R VALUE : 0.3050 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2279 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 34 REMARK 3 SOLVENT ATOMS : 129 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 37.25 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.25000 REMARK 3 B22 (A**2) : 0.85000 REMARK 3 B33 (A**2) : -0.60000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.194 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.172 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.134 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 10.099 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.956 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.934 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2361 ; 0.011 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 2201 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3211 ; 1.451 ; 1.971 REMARK 3 BOND ANGLES OTHERS (DEGREES): 5041 ; 0.818 ; 3.004 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 297 ; 6.431 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 99 ;38.526 ;24.444 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 367 ;13.429 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 11 ;17.489 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 369 ; 0.084 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2681 ; 0.006 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 539 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1197 ; 1.802 ; 2.742 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1196 ; 1.801 ; 2.740 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1491 ; 2.897 ; 4.093 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 1492 ; 2.896 ; 4.095 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1164 ; 2.165 ; 2.906 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 1165 ; 2.164 ; 2.905 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 1719 ; 3.486 ; 4.271 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 2670 ; 5.674 ;22.156 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 2634 ; 5.602 ;21.918 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 39 A 342 REMARK 3 ORIGIN FOR THE GROUP (A): 0.8502 -28.2771 -24.5918 REMARK 3 T TENSOR REMARK 3 T11: 0.2234 T22: 0.0314 REMARK 3 T33: 0.0078 T12: -0.0160 REMARK 3 T13: -0.0006 T23: 0.0111 REMARK 3 L TENSOR REMARK 3 L11: 0.2853 L22: 0.8433 REMARK 3 L33: 0.8174 L12: 0.2508 REMARK 3 L13: -0.3015 L23: -0.8037 REMARK 3 S TENSOR REMARK 3 S11: 0.0730 S12: -0.0808 S13: -0.0234 REMARK 3 S21: 0.0381 S22: -0.0422 S23: 0.0368 REMARK 3 S31: -0.1343 S32: 0.0525 S33: -0.0308 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 4W9X COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 28-AUG-14. REMARK 100 THE DEPOSITION ID IS D_1000203427. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 09-JUL-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I04-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.92 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 21713 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.140 REMARK 200 RESOLUTION RANGE LOW (A) : 33.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 200 DATA REDUNDANCY : 2.600 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.14 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.20 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.7 REMARK 200 DATA REDUNDANCY IN SHELL : 5.00 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 55.74 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.78 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 4M SODIUM CHLORIDE, 0.1M BIS-TRIS PH REMARK 280 5.5, FRESHLY PURIFIED PROTEIN, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 2 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 21.15500 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 55.70500 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 81.90000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 21.15500 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 55.70500 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 81.90000 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 21.15500 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 55.70500 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 81.90000 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 21.15500 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 55.70500 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 81.90000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 420 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 14070 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 7.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 36 REMARK 465 MET A 37 REMARK 465 SER A 38 REMARK 465 ASP A 121 REMARK 465 ASN A 122 REMARK 465 VAL A 123 REMARK 465 LEU A 146 REMARK 465 ALA A 343 REMARK 465 SER A 344 REMARK 465 GLU A 345 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 VAL A 39 CG1 CG2 REMARK 470 VAL A 41 CG1 CG2 REMARK 470 GLU A 59 CG CD OE1 OE2 REMARK 470 PHE A 62 CG CD1 CD2 CE1 CE2 CZ REMARK 470 ARG A 80 NE CZ NH1 NH2 REMARK 470 TYR A 82 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 LYS A 93 CD CE NZ REMARK 470 ARG A 94 CG CD NE CZ NH1 NH2 REMARK 470 SER A 118 OG REMARK 470 ARG A 134 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 144 CG CD CE NZ REMARK 470 LYS A 145 CG CD CE NZ REMARK 470 GLN A 147 CG CD OE1 NE2 REMARK 470 LYS A 173 CG CD CE NZ REMARK 470 LYS A 205 CG CD CE NZ REMARK 470 LYS A 211 CG CD CE NZ REMARK 470 GLU A 219 CG CD OE1 OE2 REMARK 470 LYS A 223 CE NZ REMARK 470 ASP A 282 CG OD1 OD2 REMARK 470 GLU A 303 CG CD OE1 OE2 REMARK 470 GLU A 339 CD OE1 OE2 REMARK 470 MET A 341 SD CE REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE1 GLU A 184 O HOH A 566 2.11 REMARK 500 O ILE A 108 O HOH A 537 2.11 REMARK 500 O SER A 103 O HOH A 537 2.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 112 -51.42 -120.55 REMARK 500 THR A 148 -158.77 -134.36 REMARK 500 ARG A 179 -6.69 77.86 REMARK 500 ASP A 198 87.84 65.13 REMARK 500 ILE A 235 -60.28 -96.10 REMARK 500 THR A 244 -165.70 -118.94 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 3JW A 403 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4W9W RELATED DB: PDB REMARK 900 4W9W CONTAINS THE SAME PROTEIN COMPLEXED WITH SMALL MOLECULE REMARK 900 INHIBITOR AZD7762 DBREF 4W9X A 38 345 UNP Q9NSY1 BMP2K_HUMAN 38 345 SEQADV 4W9X SER A 36 UNP Q9NSY1 EXPRESSION TAG SEQADV 4W9X MET A 37 UNP Q9NSY1 EXPRESSION TAG SEQADV 4W9X ALA A 320 UNP Q9NSY1 LYS 320 ENGINEERED MUTATION SEQADV 4W9X ALA A 321 UNP Q9NSY1 LYS 321 ENGINEERED MUTATION SEQRES 1 A 310 SER MET SER VAL GLY VAL ARG VAL PHE ALA VAL GLY ARG SEQRES 2 A 310 HIS GLN VAL THR LEU GLU GLU SER LEU ALA GLU GLY GLY SEQRES 3 A 310 PHE SER THR VAL PHE LEU VAL ARG THR HIS GLY GLY ILE SEQRES 4 A 310 ARG CYS ALA LEU LYS ARG MET TYR VAL ASN ASN MET PRO SEQRES 5 A 310 ASP LEU ASN VAL CYS LYS ARG GLU ILE THR ILE MET LYS SEQRES 6 A 310 GLU LEU SER GLY HIS LYS ASN ILE VAL GLY TYR LEU ASP SEQRES 7 A 310 CYS ALA VAL ASN SER ILE SER ASP ASN VAL TRP GLU VAL SEQRES 8 A 310 LEU ILE LEU MET GLU TYR CYS ARG ALA GLY GLN VAL VAL SEQRES 9 A 310 ASN GLN MET ASN LYS LYS LEU GLN THR GLY PHE THR GLU SEQRES 10 A 310 PRO GLU VAL LEU GLN ILE PHE CYS ASP THR CYS GLU ALA SEQRES 11 A 310 VAL ALA ARG LEU HIS GLN CYS LYS THR PRO ILE ILE HIS SEQRES 12 A 310 ARG ASP LEU LYS VAL GLU ASN ILE LEU LEU ASN ASP GLY SEQRES 13 A 310 GLY ASN TYR VAL LEU CYS ASP PHE GLY SER ALA THR ASN SEQRES 14 A 310 LYS PHE LEU ASN PRO GLN LYS ASP GLY VAL ASN VAL VAL SEQRES 15 A 310 GLU GLU GLU ILE LYS LYS TYR THR THR LEU SER TYR ARG SEQRES 16 A 310 ALA PRO GLU MET ILE ASN LEU TYR GLY GLY LYS PRO ILE SEQRES 17 A 310 THR THR LYS ALA ASP ILE TRP ALA LEU GLY CYS LEU LEU SEQRES 18 A 310 TYR LYS LEU CYS PHE PHE THR LEU PRO PHE GLY GLU SER SEQRES 19 A 310 GLN VAL ALA ILE CYS ASP GLY ASN PHE THR ILE PRO ASP SEQRES 20 A 310 ASN SER ARG TYR SER ARG ASN ILE HIS CYS LEU ILE ARG SEQRES 21 A 310 PHE MET LEU GLU PRO ASP PRO GLU HIS ARG PRO ASP ILE SEQRES 22 A 310 PHE GLN VAL SER TYR PHE ALA PHE LYS PHE ALA ALA ALA SEQRES 23 A 310 ASP CYS PRO VAL SER ASN ILE ASN ASN SER SER ILE PRO SEQRES 24 A 310 SER ALA LEU PRO GLU PRO MET THR ALA SER GLU HET EDO A 401 4 HET EDO A 402 4 HET 3JW A 403 26 HETNAM EDO 1,2-ETHANEDIOL HETNAM 3JW BARICITINIB HETSYN EDO ETHYLENE GLYCOL FORMUL 2 EDO 2(C2 H6 O2) FORMUL 4 3JW C16 H17 N7 O2 S FORMUL 5 HOH *129(H2 O) HELIX 1 AA1 ASN A 85 SER A 103 1 19 HELIX 2 AA2 GLN A 137 LYS A 145 1 9 HELIX 3 AA3 THR A 151 GLN A 171 1 21 HELIX 4 AA4 LYS A 182 GLU A 184 5 3 HELIX 5 AA5 ASN A 208 GLY A 213 1 6 HELIX 6 AA6 GLY A 213 THR A 225 1 13 HELIX 7 AA7 THR A 226 ARG A 230 5 5 HELIX 8 AA8 ALA A 231 ASN A 236 1 6 HELIX 9 AA9 THR A 245 PHE A 262 1 18 HELIX 10 AB1 SER A 269 GLY A 276 1 8 HELIX 11 AB2 SER A 287 LEU A 298 1 12 HELIX 12 AB3 ASP A 301 ARG A 305 5 5 HELIX 13 AB4 ASP A 307 ALA A 319 1 13 SHEET 1 AA1 6 VAL A 43 VAL A 46 0 SHEET 2 AA1 6 HIS A 49 GLU A 59 -1 O HIS A 49 N VAL A 46 SHEET 3 AA1 6 SER A 63 THR A 70 -1 O VAL A 65 N ALA A 58 SHEET 4 AA1 6 ARG A 75 TYR A 82 -1 O LEU A 78 N PHE A 66 SHEET 5 AA1 6 GLU A 125 GLU A 131 -1 O MET A 130 N ALA A 77 SHEET 6 AA1 6 TYR A 111 ASN A 117 -1 N ASN A 117 O GLU A 125 SHEET 1 AA2 2 ILE A 186 LEU A 188 0 SHEET 2 AA2 2 TYR A 194 LEU A 196 -1 O VAL A 195 N LEU A 187 SITE 1 AC1 3 HIS A 105 GLU A 164 ARG A 168 SITE 1 AC2 3 GLN A 157 ALA A 319 HOH A 503 SITE 1 AC3 18 ALA A 58 GLU A 59 GLY A 60 SER A 63 SITE 2 AC3 18 ALA A 77 VAL A 109 MET A 130 GLU A 131 SITE 3 AC3 18 CYS A 133 GLN A 137 GLU A 184 ASN A 185 SITE 4 AC3 18 LEU A 187 ASP A 198 HOH A 550 HOH A 576 SITE 5 AC3 18 HOH A 579 HOH A 611 CRYST1 42.310 111.410 163.800 90.00 90.00 90.00 I 2 2 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.023635 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008976 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006105 0.00000