data_4W9Z # _entry.id 4W9Z # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.383 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4W9Z pdb_00004w9z 10.2210/pdb4w9z/pdb WWPDB D_1000203435 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2015-09-09 2 'Structure model' 1 1 2024-01-10 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' 3 2 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' chem_comp_atom 2 2 'Structure model' chem_comp_bond 3 2 'Structure model' database_2 4 2 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_database_2.pdbx_DOI' 2 2 'Structure model' '_database_2.pdbx_database_accession' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 4W9Z _pdbx_database_status.recvd_initial_deposition_date 2014-08-28 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # _pdbx_database_related.db_name PDB _pdbx_database_related.details . _pdbx_database_related.db_id 4TXV _pdbx_database_related.content_type unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Quade, N.' 1 'Abicht, H.K.' 2 'Hennecke, H.' 3 'Glockshuber, R.' 4 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country ? _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'To Be Published' _citation.journal_id_ASTM ? _citation.journal_id_CSD 0353 _citation.journal_id_ISSN ? _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title 'Crystal structure of the periplasmic domain of subunit II of cytochrome oxidase (CoxB) of Bradyrhizobium japonicum' _citation.year ? _citation.database_id_CSD ? _citation.pdbx_database_id_DOI ? _citation.pdbx_database_id_PubMed ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Quade, N.' 1 ? primary 'Abicht, H.K.' 2 ? primary 'Hennecke, H.' 3 ? primary 'Glockshuber, R.' 4 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Cytochrome c oxidase subunit 2' 15598.049 1 1.9.3.1 ? ? ? 2 non-polymer syn 'COPPER (II) ION' 63.546 2 ? ? ? ? 3 water nat water 18.015 256 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MVPKADLTIKATGKQWYWSYAYPDNGKFEFDSLMAQDKQPRLLGVDNEMVVPVNKVIRVQVTGADVIHAFALPAFGVKID AIPGRLNETWFKAAKTGMFYGQCSELCGKDHAFMPIAIRVVEDKEFASWVETAKKKFAS ; _entity_poly.pdbx_seq_one_letter_code_can ;MVPKADLTIKATGKQWYWSYAYPDNGKFEFDSLMAQDKQPRLLGVDNEMVVPVNKVIRVQVTGADVIHAFALPAFGVKID AIPGRLNETWFKAAKTGMFYGQCSELCGKDHAFMPIAIRVVEDKEFASWVETAKKKFAS ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'COPPER (II) ION' CU 3 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 VAL n 1 3 PRO n 1 4 LYS n 1 5 ALA n 1 6 ASP n 1 7 LEU n 1 8 THR n 1 9 ILE n 1 10 LYS n 1 11 ALA n 1 12 THR n 1 13 GLY n 1 14 LYS n 1 15 GLN n 1 16 TRP n 1 17 TYR n 1 18 TRP n 1 19 SER n 1 20 TYR n 1 21 ALA n 1 22 TYR n 1 23 PRO n 1 24 ASP n 1 25 ASN n 1 26 GLY n 1 27 LYS n 1 28 PHE n 1 29 GLU n 1 30 PHE n 1 31 ASP n 1 32 SER n 1 33 LEU n 1 34 MET n 1 35 ALA n 1 36 GLN n 1 37 ASP n 1 38 LYS n 1 39 GLN n 1 40 PRO n 1 41 ARG n 1 42 LEU n 1 43 LEU n 1 44 GLY n 1 45 VAL n 1 46 ASP n 1 47 ASN n 1 48 GLU n 1 49 MET n 1 50 VAL n 1 51 VAL n 1 52 PRO n 1 53 VAL n 1 54 ASN n 1 55 LYS n 1 56 VAL n 1 57 ILE n 1 58 ARG n 1 59 VAL n 1 60 GLN n 1 61 VAL n 1 62 THR n 1 63 GLY n 1 64 ALA n 1 65 ASP n 1 66 VAL n 1 67 ILE n 1 68 HIS n 1 69 ALA n 1 70 PHE n 1 71 ALA n 1 72 LEU n 1 73 PRO n 1 74 ALA n 1 75 PHE n 1 76 GLY n 1 77 VAL n 1 78 LYS n 1 79 ILE n 1 80 ASP n 1 81 ALA n 1 82 ILE n 1 83 PRO n 1 84 GLY n 1 85 ARG n 1 86 LEU n 1 87 ASN n 1 88 GLU n 1 89 THR n 1 90 TRP n 1 91 PHE n 1 92 LYS n 1 93 ALA n 1 94 ALA n 1 95 LYS n 1 96 THR n 1 97 GLY n 1 98 MET n 1 99 PHE n 1 100 TYR n 1 101 GLY n 1 102 GLN n 1 103 CYS n 1 104 SER n 1 105 GLU n 1 106 LEU n 1 107 CYS n 1 108 GLY n 1 109 LYS n 1 110 ASP n 1 111 HIS n 1 112 ALA n 1 113 PHE n 1 114 MET n 1 115 PRO n 1 116 ILE n 1 117 ALA n 1 118 ILE n 1 119 ARG n 1 120 VAL n 1 121 VAL n 1 122 GLU n 1 123 ASP n 1 124 LYS n 1 125 GLU n 1 126 PHE n 1 127 ALA n 1 128 SER n 1 129 TRP n 1 130 VAL n 1 131 GLU n 1 132 THR n 1 133 ALA n 1 134 LYS n 1 135 LYS n 1 136 LYS n 1 137 PHE n 1 138 ALA n 1 139 SER n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 139 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'coxB, blr1170' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 'JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Bradyrhizobium diazoefficiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 224911 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET11a-CoxBPD _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CU non-polymer . 'COPPER (II) ION' ? 'Cu 2' 63.546 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 127 127 MET MET A . n A 1 2 VAL 2 128 128 VAL VAL A . n A 1 3 PRO 3 129 129 PRO PRO A . n A 1 4 LYS 4 130 130 LYS LYS A . n A 1 5 ALA 5 131 131 ALA ALA A . n A 1 6 ASP 6 132 132 ASP ASP A . n A 1 7 LEU 7 133 133 LEU LEU A . n A 1 8 THR 8 134 134 THR THR A . n A 1 9 ILE 9 135 135 ILE ILE A . n A 1 10 LYS 10 136 136 LYS LYS A . n A 1 11 ALA 11 137 137 ALA ALA A . n A 1 12 THR 12 138 138 THR THR A . n A 1 13 GLY 13 139 139 GLY GLY A . n A 1 14 LYS 14 140 140 LYS LYS A . n A 1 15 GLN 15 141 141 GLN GLN A . n A 1 16 TRP 16 142 142 TRP TRP A . n A 1 17 TYR 17 143 143 TYR TYR A . n A 1 18 TRP 18 144 144 TRP TRP A . n A 1 19 SER 19 145 145 SER SER A . n A 1 20 TYR 20 146 146 TYR TYR A . n A 1 21 ALA 21 147 147 ALA ALA A . n A 1 22 TYR 22 148 148 TYR TYR A . n A 1 23 PRO 23 149 149 PRO PRO A . n A 1 24 ASP 24 150 150 ASP ASP A . n A 1 25 ASN 25 151 151 ASN ASN A . n A 1 26 GLY 26 152 152 GLY GLY A . n A 1 27 LYS 27 153 153 LYS LYS A . n A 1 28 PHE 28 154 154 PHE PHE A . n A 1 29 GLU 29 155 155 GLU GLU A . n A 1 30 PHE 30 156 156 PHE PHE A . n A 1 31 ASP 31 157 157 ASP ASP A . n A 1 32 SER 32 158 158 SER SER A . n A 1 33 LEU 33 159 159 LEU LEU A . n A 1 34 MET 34 160 160 MET MET A . n A 1 35 ALA 35 161 161 ALA ALA A . n A 1 36 GLN 36 162 162 GLN GLN A . n A 1 37 ASP 37 163 163 ASP ASP A . n A 1 38 LYS 38 164 164 LYS LYS A . n A 1 39 GLN 39 165 165 GLN GLN A . n A 1 40 PRO 40 166 166 PRO PRO A . n A 1 41 ARG 41 167 167 ARG ARG A . n A 1 42 LEU 42 168 168 LEU LEU A . n A 1 43 LEU 43 169 169 LEU LEU A . n A 1 44 GLY 44 170 170 GLY GLY A . n A 1 45 VAL 45 171 171 VAL VAL A . n A 1 46 ASP 46 172 172 ASP ASP A . n A 1 47 ASN 47 173 173 ASN ASN A . n A 1 48 GLU 48 174 174 GLU GLU A . n A 1 49 MET 49 175 175 MET MET A . n A 1 50 VAL 50 176 176 VAL VAL A . n A 1 51 VAL 51 177 177 VAL VAL A . n A 1 52 PRO 52 178 178 PRO PRO A . n A 1 53 VAL 53 179 179 VAL VAL A . n A 1 54 ASN 54 180 180 ASN ASN A . n A 1 55 LYS 55 181 181 LYS LYS A . n A 1 56 VAL 56 182 182 VAL VAL A . n A 1 57 ILE 57 183 183 ILE ILE A . n A 1 58 ARG 58 184 184 ARG ARG A . n A 1 59 VAL 59 185 185 VAL VAL A . n A 1 60 GLN 60 186 186 GLN GLN A . n A 1 61 VAL 61 187 187 VAL VAL A . n A 1 62 THR 62 188 188 THR THR A . n A 1 63 GLY 63 189 189 GLY GLY A . n A 1 64 ALA 64 190 190 ALA ALA A . n A 1 65 ASP 65 191 191 ASP ASP A . n A 1 66 VAL 66 192 192 VAL VAL A . n A 1 67 ILE 67 193 193 ILE ILE A . n A 1 68 HIS 68 194 194 HIS HIS A . n A 1 69 ALA 69 195 195 ALA ALA A . n A 1 70 PHE 70 196 196 PHE PHE A . n A 1 71 ALA 71 197 197 ALA ALA A . n A 1 72 LEU 72 198 198 LEU LEU A . n A 1 73 PRO 73 199 199 PRO PRO A . n A 1 74 ALA 74 200 200 ALA ALA A . n A 1 75 PHE 75 201 201 PHE PHE A . n A 1 76 GLY 76 202 202 GLY GLY A . n A 1 77 VAL 77 203 203 VAL VAL A . n A 1 78 LYS 78 204 204 LYS LYS A . n A 1 79 ILE 79 205 205 ILE ILE A . n A 1 80 ASP 80 206 206 ASP ASP A . n A 1 81 ALA 81 207 207 ALA ALA A . n A 1 82 ILE 82 208 208 ILE ILE A . n A 1 83 PRO 83 209 209 PRO PRO A . n A 1 84 GLY 84 210 210 GLY GLY A . n A 1 85 ARG 85 211 211 ARG ARG A . n A 1 86 LEU 86 212 212 LEU LEU A . n A 1 87 ASN 87 213 213 ASN ASN A . n A 1 88 GLU 88 214 214 GLU GLU A . n A 1 89 THR 89 215 215 THR THR A . n A 1 90 TRP 90 216 216 TRP TRP A . n A 1 91 PHE 91 217 217 PHE PHE A . n A 1 92 LYS 92 218 218 LYS LYS A . n A 1 93 ALA 93 219 219 ALA ALA A . n A 1 94 ALA 94 220 220 ALA ALA A . n A 1 95 LYS 95 221 221 LYS LYS A . n A 1 96 THR 96 222 222 THR THR A . n A 1 97 GLY 97 223 223 GLY GLY A . n A 1 98 MET 98 224 224 MET MET A . n A 1 99 PHE 99 225 225 PHE PHE A . n A 1 100 TYR 100 226 226 TYR TYR A . n A 1 101 GLY 101 227 227 GLY GLY A . n A 1 102 GLN 102 228 228 GLN GLN A . n A 1 103 CYS 103 229 229 CYS CYS A . n A 1 104 SER 104 230 230 SER SER A . n A 1 105 GLU 105 231 231 GLU GLU A . n A 1 106 LEU 106 232 232 LEU LEU A . n A 1 107 CYS 107 233 233 CYS CYS A . n A 1 108 GLY 108 234 234 GLY GLY A . n A 1 109 LYS 109 235 235 LYS LYS A . n A 1 110 ASP 110 236 236 ASP ASP A . n A 1 111 HIS 111 237 237 HIS HIS A . n A 1 112 ALA 112 238 238 ALA ALA A . n A 1 113 PHE 113 239 239 PHE PHE A . n A 1 114 MET 114 240 240 MET MET A . n A 1 115 PRO 115 241 241 PRO PRO A . n A 1 116 ILE 116 242 242 ILE ILE A . n A 1 117 ALA 117 243 243 ALA ALA A . n A 1 118 ILE 118 244 244 ILE ILE A . n A 1 119 ARG 119 245 245 ARG ARG A . n A 1 120 VAL 120 246 246 VAL VAL A . n A 1 121 VAL 121 247 247 VAL VAL A . n A 1 122 GLU 122 248 248 GLU GLU A . n A 1 123 ASP 123 249 249 ASP ASP A . n A 1 124 LYS 124 250 250 LYS LYS A . n A 1 125 GLU 125 251 251 GLU GLU A . n A 1 126 PHE 126 252 252 PHE PHE A . n A 1 127 ALA 127 253 253 ALA ALA A . n A 1 128 SER 128 254 254 SER SER A . n A 1 129 TRP 129 255 255 TRP TRP A . n A 1 130 VAL 130 256 256 VAL VAL A . n A 1 131 GLU 131 257 257 GLU GLU A . n A 1 132 THR 132 258 258 THR THR A . n A 1 133 ALA 133 259 259 ALA ALA A . n A 1 134 LYS 134 260 260 LYS LYS A . n A 1 135 LYS 135 261 261 LYS LYS A . n A 1 136 LYS 136 262 262 LYS LYS A . n A 1 137 PHE 137 263 263 PHE PHE A . n A 1 138 ALA 138 264 264 ALA ALA A . n A 1 139 SER 139 265 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CU 1 301 1 CU CU A . C 2 CU 1 302 2 CU CU A . D 3 HOH 1 401 80 HOH HOH A . D 3 HOH 2 402 163 HOH HOH A . D 3 HOH 3 403 25 HOH HOH A . D 3 HOH 4 404 46 HOH HOH A . D 3 HOH 5 405 145 HOH HOH A . D 3 HOH 6 406 2 HOH HOH A . D 3 HOH 7 407 136 HOH HOH A . D 3 HOH 8 408 3 HOH HOH A . D 3 HOH 9 409 126 HOH HOH A . D 3 HOH 10 410 40 HOH HOH A . D 3 HOH 11 411 123 HOH HOH A . D 3 HOH 12 412 106 HOH HOH A . D 3 HOH 13 413 14 HOH HOH A . D 3 HOH 14 414 9 HOH HOH A . D 3 HOH 15 415 40 HOH HOH A . D 3 HOH 16 416 41 HOH HOH A . D 3 HOH 17 417 64 HOH HOH A . D 3 HOH 18 418 49 HOH HOH A . D 3 HOH 19 419 38 HOH HOH A . D 3 HOH 20 420 39 HOH HOH A . D 3 HOH 21 421 12 HOH HOH A . D 3 HOH 22 422 18 HOH HOH A . D 3 HOH 23 423 53 HOH HOH A . D 3 HOH 24 424 15 HOH HOH A . D 3 HOH 25 425 45 HOH HOH A . D 3 HOH 26 426 79 HOH HOH A . D 3 HOH 27 427 29 HOH HOH A . D 3 HOH 28 428 6 HOH HOH A . D 3 HOH 29 429 88 HOH HOH A . D 3 HOH 30 430 44 HOH HOH A . D 3 HOH 31 431 73 HOH HOH A . D 3 HOH 32 432 76 HOH HOH A . D 3 HOH 33 433 82 HOH HOH A . D 3 HOH 34 434 70 HOH HOH A . D 3 HOH 35 435 19 HOH HOH A . D 3 HOH 36 436 64 HOH HOH A . D 3 HOH 37 437 85 HOH HOH A . D 3 HOH 38 438 33 HOH HOH A . D 3 HOH 39 439 69 HOH HOH A . D 3 HOH 40 440 146 HOH HOH A . D 3 HOH 41 441 27 HOH HOH A . D 3 HOH 42 442 50 HOH HOH A . D 3 HOH 43 443 165 HOH HOH A . D 3 HOH 44 444 17 HOH HOH A . D 3 HOH 45 445 65 HOH HOH A . D 3 HOH 46 446 54 HOH HOH A . D 3 HOH 47 447 93 HOH HOH A . D 3 HOH 48 448 72 HOH HOH A . D 3 HOH 49 449 49 HOH HOH A . D 3 HOH 50 450 12 HOH HOH A . D 3 HOH 51 451 137 HOH HOH A . D 3 HOH 52 452 4 HOH HOH A . D 3 HOH 53 453 22 HOH HOH A . D 3 HOH 54 454 68 HOH HOH A . D 3 HOH 55 455 138 HOH HOH A . D 3 HOH 56 456 10 HOH HOH A . D 3 HOH 57 457 101 HOH HOH A . D 3 HOH 58 458 104 HOH HOH A . D 3 HOH 59 459 60 HOH HOH A . D 3 HOH 60 460 40 HOH HOH A . D 3 HOH 61 461 37 HOH HOH A . D 3 HOH 62 462 4 HOH HOH A . D 3 HOH 63 463 8 HOH HOH A . D 3 HOH 64 464 11 HOH HOH A . D 3 HOH 65 465 13 HOH HOH A . D 3 HOH 66 466 69 HOH HOH A . D 3 HOH 67 467 29 HOH HOH A . D 3 HOH 68 468 31 HOH HOH A . D 3 HOH 69 469 154 HOH HOH A . D 3 HOH 70 470 9 HOH HOH A . D 3 HOH 71 471 30 HOH HOH A . D 3 HOH 72 472 90 HOH HOH A . D 3 HOH 73 473 107 HOH HOH A . D 3 HOH 74 474 133 HOH HOH A . D 3 HOH 75 475 177 HOH HOH A . D 3 HOH 76 476 24 HOH HOH A . D 3 HOH 77 477 31 HOH HOH A . D 3 HOH 78 478 8 HOH HOH A . D 3 HOH 79 479 1 HOH HOH A . D 3 HOH 80 480 21 HOH HOH A . D 3 HOH 81 481 169 HOH HOH A . D 3 HOH 82 482 143 HOH HOH A . D 3 HOH 83 483 80 HOH HOH A . D 3 HOH 84 484 115 HOH HOH A . D 3 HOH 85 485 89 HOH HOH A . D 3 HOH 86 486 87 HOH HOH A . D 3 HOH 87 487 62 HOH HOH A . D 3 HOH 88 488 116 HOH HOH A . D 3 HOH 89 489 114 HOH HOH A . D 3 HOH 90 490 92 HOH HOH A . D 3 HOH 91 491 124 HOH HOH A . D 3 HOH 92 492 141 HOH HOH A . D 3 HOH 93 493 10 HOH HOH A . D 3 HOH 94 494 158 HOH HOH A . D 3 HOH 95 495 157 HOH HOH A . D 3 HOH 96 496 16 HOH HOH A . D 3 HOH 97 497 160 HOH HOH A . D 3 HOH 98 498 144 HOH HOH A . D 3 HOH 99 499 155 HOH HOH A . D 3 HOH 100 500 34 HOH HOH A . D 3 HOH 101 501 129 HOH HOH A . D 3 HOH 102 502 65 HOH HOH A . D 3 HOH 103 503 163 HOH HOH A . D 3 HOH 104 504 57 HOH HOH A . D 3 HOH 105 505 149 HOH HOH A . D 3 HOH 106 506 147 HOH HOH A . D 3 HOH 107 507 156 HOH HOH A . D 3 HOH 108 508 20 HOH HOH A . D 3 HOH 109 509 142 HOH HOH A . D 3 HOH 110 510 170 HOH HOH A . D 3 HOH 111 511 88 HOH HOH A . D 3 HOH 112 512 134 HOH HOH A . D 3 HOH 113 513 77 HOH HOH A . D 3 HOH 114 514 153 HOH HOH A . D 3 HOH 115 515 2 HOH HOH A . D 3 HOH 116 516 3 HOH HOH A . D 3 HOH 117 517 4 HOH HOH A . D 3 HOH 118 518 5 HOH HOH A . D 3 HOH 119 519 7 HOH HOH A . D 3 HOH 120 520 10 HOH HOH A . D 3 HOH 121 521 12 HOH HOH A . D 3 HOH 122 522 19 HOH HOH A . D 3 HOH 123 523 22 HOH HOH A . D 3 HOH 124 524 23 HOH HOH A . D 3 HOH 125 525 25 HOH HOH A . D 3 HOH 126 526 26 HOH HOH A . D 3 HOH 127 527 27 HOH HOH A . D 3 HOH 128 528 28 HOH HOH A . D 3 HOH 129 529 32 HOH HOH A . D 3 HOH 130 530 33 HOH HOH A . D 3 HOH 131 531 35 HOH HOH A . D 3 HOH 132 532 36 HOH HOH A . D 3 HOH 133 533 37 HOH HOH A . D 3 HOH 134 534 42 HOH HOH A . D 3 HOH 135 535 43 HOH HOH A . D 3 HOH 136 536 45 HOH HOH A . D 3 HOH 137 537 47 HOH HOH A . D 3 HOH 138 538 48 HOH HOH A . D 3 HOH 139 539 51 HOH HOH A . D 3 HOH 140 540 52 HOH HOH A . D 3 HOH 141 541 54 HOH HOH A . D 3 HOH 142 542 55 HOH HOH A . D 3 HOH 143 543 56 HOH HOH A . D 3 HOH 144 544 57 HOH HOH A . D 3 HOH 145 545 58 HOH HOH A . D 3 HOH 146 546 59 HOH HOH A . D 3 HOH 147 547 61 HOH HOH A . D 3 HOH 148 548 63 HOH HOH A . D 3 HOH 149 549 66 HOH HOH A . D 3 HOH 150 550 67 HOH HOH A . D 3 HOH 151 551 71 HOH HOH A . D 3 HOH 152 552 74 HOH HOH A . D 3 HOH 153 553 75 HOH HOH A . D 3 HOH 154 554 77 HOH HOH A . D 3 HOH 155 555 78 HOH HOH A . D 3 HOH 156 556 81 HOH HOH A . D 3 HOH 157 557 83 HOH HOH A . D 3 HOH 158 558 85 HOH HOH A . D 3 HOH 159 559 86 HOH HOH A . D 3 HOH 160 560 91 HOH HOH A . D 3 HOH 161 561 94 HOH HOH A . D 3 HOH 162 562 97 HOH HOH A . D 3 HOH 163 563 98 HOH HOH A . D 3 HOH 164 564 99 HOH HOH A . D 3 HOH 165 565 100 HOH HOH A . D 3 HOH 166 566 102 HOH HOH A . D 3 HOH 167 567 103 HOH HOH A . D 3 HOH 168 568 105 HOH HOH A . D 3 HOH 169 569 107 HOH HOH A . D 3 HOH 170 570 108 HOH HOH A . D 3 HOH 171 571 111 HOH HOH A . D 3 HOH 172 572 112 HOH HOH A . D 3 HOH 173 573 113 HOH HOH A . D 3 HOH 174 574 117 HOH HOH A . D 3 HOH 175 575 118 HOH HOH A . D 3 HOH 176 576 119 HOH HOH A . D 3 HOH 177 577 120 HOH HOH A . D 3 HOH 178 578 122 HOH HOH A . D 3 HOH 179 579 127 HOH HOH A . D 3 HOH 180 580 128 HOH HOH A . D 3 HOH 181 581 131 HOH HOH A . D 3 HOH 182 582 132 HOH HOH A . D 3 HOH 183 583 135 HOH HOH A . D 3 HOH 184 584 139 HOH HOH A . D 3 HOH 185 585 140 HOH HOH A . D 3 HOH 186 586 148 HOH HOH A . D 3 HOH 187 587 150 HOH HOH A . D 3 HOH 188 588 151 HOH HOH A . D 3 HOH 189 589 152 HOH HOH A . D 3 HOH 190 590 156 HOH HOH A . D 3 HOH 191 591 158 HOH HOH A . D 3 HOH 192 592 159 HOH HOH A . D 3 HOH 193 593 160 HOH HOH A . D 3 HOH 194 594 161 HOH HOH A . D 3 HOH 195 595 162 HOH HOH A . D 3 HOH 196 596 1 HOH HOH A . D 3 HOH 197 597 2 HOH HOH A . D 3 HOH 198 598 4 HOH HOH A . D 3 HOH 199 599 5 HOH HOH A . D 3 HOH 200 600 6 HOH HOH A . D 3 HOH 201 601 7 HOH HOH A . D 3 HOH 202 602 8 HOH HOH A . D 3 HOH 203 603 11 HOH HOH A . D 3 HOH 204 604 14 HOH HOH A . D 3 HOH 205 605 15 HOH HOH A . D 3 HOH 206 606 17 HOH HOH A . D 3 HOH 207 607 18 HOH HOH A . D 3 HOH 208 608 21 HOH HOH A . D 3 HOH 209 609 24 HOH HOH A . D 3 HOH 210 610 25 HOH HOH A . D 3 HOH 211 611 26 HOH HOH A . D 3 HOH 212 612 30 HOH HOH A . D 3 HOH 213 613 32 HOH HOH A . D 3 HOH 214 614 36 HOH HOH A . D 3 HOH 215 615 38 HOH HOH A . D 3 HOH 216 616 39 HOH HOH A . D 3 HOH 217 617 42 HOH HOH A . D 3 HOH 218 618 43 HOH HOH A . D 3 HOH 219 619 44 HOH HOH A . D 3 HOH 220 620 47 HOH HOH A . D 3 HOH 221 621 50 HOH HOH A . D 3 HOH 222 622 53 HOH HOH A . D 3 HOH 223 623 66 HOH HOH A . D 3 HOH 224 624 67 HOH HOH A . D 3 HOH 225 625 68 HOH HOH A . D 3 HOH 226 626 74 HOH HOH A . D 3 HOH 227 627 77 HOH HOH A . D 3 HOH 228 628 79 HOH HOH A . D 3 HOH 229 629 80 HOH HOH A . D 3 HOH 230 630 144 HOH HOH A . D 3 HOH 231 631 155 HOH HOH A . D 3 HOH 232 632 157 HOH HOH A . D 3 HOH 233 633 159 HOH HOH A . D 3 HOH 234 634 166 HOH HOH A . D 3 HOH 235 635 171 HOH HOH A . D 3 HOH 236 636 4 HOH HOH A . D 3 HOH 237 637 14 HOH HOH A . D 3 HOH 238 638 15 HOH HOH A . D 3 HOH 239 639 18 HOH HOH A . D 3 HOH 240 640 55 HOH HOH A . D 3 HOH 241 641 66 HOH HOH A . D 3 HOH 242 642 79 HOH HOH A . D 3 HOH 243 643 80 HOH HOH A . D 3 HOH 244 644 2 HOH HOH A . D 3 HOH 245 645 5 HOH HOH A . D 3 HOH 246 646 21 HOH HOH A . D 3 HOH 247 647 46 HOH HOH A . D 3 HOH 248 648 93 HOH HOH A . D 3 HOH 249 649 95 HOH HOH A . D 3 HOH 250 650 14 HOH HOH A . D 3 HOH 251 651 44 HOH HOH A . D 3 HOH 252 652 46 HOH HOH A . D 3 HOH 253 653 54 HOH HOH A . D 3 HOH 254 654 62 HOH HOH A . D 3 HOH 255 655 109 HOH HOH A . D 3 HOH 256 656 126 HOH HOH A . # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? REFMAC ? ? ? 5.8.0073 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 2 ? 'model building' ? ? ? ? ? ? ? ? ? ? ? Coot ? ? ? . 3 ? 'data extraction' ? ? ? ? ? ? ? ? ? ? ? PDB_EXTRACT ? ? ? 3.15 4 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? XSCALE ? ? ? . 5 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 6 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XSCALE ? ? ? . 7 # _cell.length_a 32.431 _cell.length_b 38.612 _cell.length_c 59.644 _cell.angle_alpha 90.000 _cell.angle_beta 97.630 _cell.angle_gamma 90.000 _cell.entry_id 4W9Z _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.entry_id 4W9Z _symmetry.Int_Tables_number 4 _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 4W9Z _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.39 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 48.45 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 277 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details ;0.2M Potassium bromide, 0.1M Tris pH 7.5, 10% PEG1000, 10% PEG8000 ; _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 80 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS PILATUS 6M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2014-08-22 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'SLS BEAMLINE X06SA' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 1 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline X06SA _diffrn_source.pdbx_synchrotron_site SLS # _reflns.entry_id 4W9Z _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.d_resolution_high 1.300 _reflns.pdbx_number_measured_all 231266 _reflns.number_obs 35883 _reflns.pdbx_Rmerge_I_obs 0.048 _reflns.pdbx_netI_over_sigmaI 20.130 _reflns.pdbx_chi_squared 1.018 _reflns.percent_possible_obs 99.200 _reflns.B_iso_Wilson_estimate 16.269 _reflns.Rmerge_F_obs 0.999 _reflns.observed_criterion_sigma_I -3.000 _reflns.pdbx_Rrim_I_all 0.053 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low ? _reflns.number_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_redundancy ? # loop_ _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_ordinal _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.pdbx_rejects _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.pdbx_netI_over_sigmaI_obs _reflns_shell.number_possible _reflns_shell.number_unique_all _reflns_shell.Rmerge_F_all _reflns_shell.Rmerge_F_obs _reflns_shell.Rmerge_I_all _reflns_shell.meanI_over_sigI_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_Rrim_I_all _reflns_shell.pdbx_Rpim_I_all _reflns_shell.pdbx_CC_half 1 1 1.300 1.330 15490 ? 2652 0 0.247 5.250 ? ? ? ? ? 2665 ? ? 0.960 ? ? 99.500 0.272 ? ? 1 2 1.330 1.370 15305 ? 2554 0 0.231 5.720 ? ? ? ? ? 2569 ? ? 0.970 ? ? 99.400 0.254 ? ? 1 3 1.370 1.410 15360 ? 2507 0 0.195 6.860 ? ? ? ? ? 2532 ? ? 0.977 ? ? 99.000 0.214 ? ? 1 4 1.410 1.450 14160 ? 2393 0 0.169 7.720 ? ? ? ? ? 2436 ? ? 0.983 ? ? 98.200 0.186 ? ? 1 5 1.450 1.500 14787 ? 2343 0 0.159 8.910 ? ? ? ? ? 2361 ? ? 0.984 ? ? 99.200 0.174 ? ? 1 6 1.500 1.550 14918 ? 2307 0 0.135 10.840 ? ? ? ? ? 2313 ? ? 0.989 ? ? 99.700 0.146 ? ? 1 7 1.550 1.610 14529 ? 2233 0 0.117 12.850 ? ? ? ? ? 2237 ? ? 0.991 ? ? 99.800 0.128 ? ? 1 8 1.610 1.680 13561 ? 2108 0 0.099 14.810 ? ? ? ? ? 2127 ? ? 0.994 ? ? 99.100 0.108 ? ? 1 9 1.680 1.750 13037 ? 2004 0 0.083 17.770 ? ? ? ? ? 2045 ? ? 0.995 ? ? 98.000 0.091 ? ? 1 10 1.750 1.840 13560 ? 1955 0 0.077 21.140 ? ? ? ? ? 1958 ? ? 0.996 ? ? 99.800 0.083 ? ? 1 11 1.840 1.940 12914 ? 1885 0 0.066 23.930 ? ? ? ? ? 1888 ? ? 0.997 ? ? 99.800 0.072 ? ? 1 12 1.940 2.060 11749 ? 1746 0 0.054 28.580 ? ? ? ? ? 1754 ? ? 0.998 ? ? 99.500 0.059 ? ? 1 13 2.060 2.200 10476 ? 1638 0 0.051 30.840 ? ? ? ? ? 1669 ? ? 0.998 ? ? 98.100 0.055 ? ? 1 14 2.200 2.370 10960 ? 1541 0 0.046 35.810 ? ? ? ? ? 1544 ? ? 0.999 ? ? 99.800 0.050 ? ? 1 15 2.370 2.600 9976 ? 1428 0 0.043 37.770 ? ? ? ? ? 1430 ? ? 0.999 ? ? 99.900 0.047 ? ? 1 16 2.600 2.910 8656 ? 1293 0 0.039 40.320 ? ? ? ? ? 1302 ? ? 0.999 ? ? 99.300 0.042 ? ? 1 17 2.910 3.360 7302 ? 1135 0 0.031 46.620 ? ? ? ? ? 1152 ? ? 0.999 ? ? 98.500 0.033 ? ? 1 18 3.360 4.110 6697 ? 972 0 0.027 53.240 ? ? ? ? ? 974 ? ? 0.999 ? ? 99.800 0.030 ? ? 1 19 4.110 5.810 4967 ? 752 0 0.027 53.780 ? ? ? ? ? 768 ? ? 0.999 ? ? 97.900 0.029 ? ? 1 20 5.810 ? 2862 ? 437 0 0.033 53.230 ? ? ? ? ? 442 ? ? 0.999 ? ? 98.900 0.035 ? ? # _refine.entry_id 4W9Z _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_d_res_high 1.3000 _refine.ls_d_res_low 59.1200 _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 99.2000 _refine.ls_number_reflns_obs 34089 _refine.ls_number_reflns_all ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.ls_matrix_type ? _refine.pdbx_R_Free_selection_details RANDOM _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS U VALUES : REFINED INDIVIDUALLY' _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1102 _refine.ls_R_factor_R_work 0.1089 _refine.ls_wR_factor_R_work 0.1131 _refine.ls_R_factor_R_free 0.1336 _refine.ls_wR_factor_R_free 0.1376 _refine.ls_percent_reflns_R_free 5.0000 _refine.ls_number_reflns_R_free 1795 _refine.ls_number_reflns_R_work 34089 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 16.6370 _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] -0.2800 _refine.aniso_B[2][2] 0.4600 _refine.aniso_B[3][3] -0.1600 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] -0.0800 _refine.aniso_B[2][3] 0.0000 _refine.correlation_coeff_Fo_to_Fc 0.9800 _refine.correlation_coeff_Fo_to_Fc_free 0.9750 _refine.overall_SU_R_Cruickshank_DPI 0.0364 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.overall_SU_R_free 0.0356 _refine.pdbx_overall_ESU_R 0.0360 _refine.pdbx_overall_ESU_R_Free 0.0360 _refine.overall_SU_ML 0.0190 _refine.overall_SU_B 0.9550 _refine.solvent_model_details MASK _refine.pdbx_solvent_vdw_probe_radii 1.2000 _refine.pdbx_solvent_ion_probe_radii 0.8000 _refine.pdbx_solvent_shrinkage_radii 0.8000 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_starting_model 4TXV _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set 0.9419 _refine.B_iso_max 169.860 _refine.B_iso_min 4.410 _refine.pdbx_overall_phase_error ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_R_factor_R_free_error_details ? # _refine_hist.cycle_id final _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.d_res_high 1.3000 _refine_hist.d_res_low 59.1200 _refine_hist.pdbx_number_atoms_ligand 2 _refine_hist.number_atoms_solvent 256 _refine_hist.number_atoms_total 1349 _refine_hist.pdbx_number_residues_total 138 _refine_hist.pdbx_B_iso_mean_ligand 8.39 _refine_hist.pdbx_B_iso_mean_solvent 30.95 _refine_hist.pdbx_number_atoms_protein 1091 _refine_hist.pdbx_number_atoms_nucleic_acid 0 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' r_bond_refined_d 1155 0.026 0.020 ? ? 'X-RAY DIFFRACTION' r_bond_other_d 1117 0.001 0.020 ? ? 'X-RAY DIFFRACTION' r_angle_refined_deg 1570 2.270 1.940 ? ? 'X-RAY DIFFRACTION' r_angle_other_deg 2586 1.238 3.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_1_deg 148 8.812 5.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_2_deg 50 35.294 24.600 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_3_deg 203 13.508 15.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_4_deg 4 14.590 15.000 ? ? 'X-RAY DIFFRACTION' r_chiral_restr 170 0.131 0.200 ? ? 'X-RAY DIFFRACTION' r_gen_planes_refined 1296 0.010 0.021 ? ? 'X-RAY DIFFRACTION' r_gen_planes_other 264 0.004 0.020 ? ? 'X-RAY DIFFRACTION' r_mcbond_it 563 2.457 1.110 ? ? 'X-RAY DIFFRACTION' r_mcbond_other 562 2.409 1.103 ? ? 'X-RAY DIFFRACTION' r_mcangle_it 704 3.219 1.673 ? ? 'X-RAY DIFFRACTION' r_rigid_bond_restr 2272 6.327 3.000 ? ? 'X-RAY DIFFRACTION' r_sphericity_free 46 37.673 5.000 ? ? 'X-RAY DIFFRACTION' r_sphericity_bonded 2449 15.054 5.000 ? ? # _refine_ls_shell.d_res_high 1.3000 _refine_ls_shell.d_res_low 1.3340 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 99.4400 _refine_ls_shell.number_reflns_R_work 2512 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.1210 _refine_ls_shell.R_factor_R_free 0.1330 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 133 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all 2645 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.R_factor_obs ? # _struct.entry_id 4W9Z _struct.title 'Crystal structure of the periplasmic domain of subunit II of cytochrome oxidase (CoxB) of Bradyrhizobium japonicum' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag ? # _struct_keywords.entry_id 4W9Z _struct_keywords.text 'oxidoreductase, CuA, Respiration' _struct_keywords.pdbx_keywords OXIDOREDUCTASE # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 3 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code H7C6E5_BRADU _struct_ref.pdbx_db_accession H7C6E5 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;VPKADLTIKATGKQWYWSYAYPDNGKFEFDSLMAQDKQPRLLGVDNEMVVPVNKVIRVQVTGADVIHAFALPAFGVKIDA IPGRLNETWFKAAKTGMFYGQCSELCGKDHAFMPIAIRVVEDKEFASWVETAKKKFAS ; _struct_ref.pdbx_align_begin 128 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 4W9Z _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 2 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 139 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession H7C6E5 _struct_ref_seq.db_align_beg 128 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 265 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 128 _struct_ref_seq.pdbx_auth_seq_align_end 265 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 4W9Z _struct_ref_seq_dif.mon_id MET _struct_ref_seq_dif.pdbx_pdb_strand_id A _struct_ref_seq_dif.seq_num 1 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code H7C6E5 _struct_ref_seq_dif.db_mon_id ? _struct_ref_seq_dif.pdbx_seq_db_seq_num ? _struct_ref_seq_dif.details 'initiating methionine' _struct_ref_seq_dif.pdbx_auth_seq_num 127 _struct_ref_seq_dif.pdbx_ordinal 1 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 PRO A 73 ? GLY A 76 ? PRO A 199 GLY A 202 5 ? 4 HELX_P HELX_P2 AA2 ASP A 110 ? MET A 114 ? ASP A 236 MET A 240 5 ? 5 HELX_P HELX_P3 AA3 GLU A 122 ? PHE A 137 ? GLU A 248 PHE A 263 1 ? 16 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A HIS 68 ND1 ? ? ? 1_555 B CU . CU ? ? A HIS 194 A CU 301 1_555 ? ? ? ? ? ? ? 2.027 ? ? metalc2 metalc ? ? A CYS 103 SG ? ? ? 1_555 B CU . CU ? ? A CYS 229 A CU 301 1_555 ? ? ? ? ? ? ? 2.340 ? ? metalc3 metalc ? ? A CYS 103 SG ? ? ? 1_555 C CU . CU ? ? A CYS 229 A CU 302 1_555 ? ? ? ? ? ? ? 2.324 ? ? metalc4 metalc ? ? A GLU 105 O ? ? ? 1_555 C CU . CU ? ? A GLU 231 A CU 302 1_555 ? ? ? ? ? ? ? 2.399 ? ? metalc5 metalc ? ? A CYS 107 SG ? ? ? 1_555 B CU . CU ? ? A CYS 233 A CU 301 1_555 ? ? ? ? ? ? ? 2.341 ? ? metalc6 metalc ? ? A CYS 107 SG ? ? ? 1_555 C CU . CU ? ? A CYS 233 A CU 302 1_555 ? ? ? ? ? ? ? 2.282 ? ? metalc7 metalc ? ? A HIS 111 ND1 ? ? ? 1_555 C CU . CU ? ? A HIS 237 A CU 302 1_555 ? ? ? ? ? ? ? 1.990 ? ? metalc8 metalc ? ? A MET 114 SD ? ? ? 1_555 B CU . CU ? ? A MET 240 A CU 301 1_555 ? ? ? ? ? ? ? 2.435 ? ? metalc9 metalc ? ? B CU . CU ? ? ? 1_555 C CU . CU ? ? A CU 301 A CU 302 1_555 ? ? ? ? ? ? ? 2.471 ? ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 ND1 ? A HIS 68 ? A HIS 194 ? 1_555 CU ? B CU . ? A CU 301 ? 1_555 SG ? A CYS 103 ? A CYS 229 ? 1_555 120.1 ? 2 ND1 ? A HIS 68 ? A HIS 194 ? 1_555 CU ? B CU . ? A CU 301 ? 1_555 SG ? A CYS 107 ? A CYS 233 ? 1_555 103.7 ? 3 SG ? A CYS 103 ? A CYS 229 ? 1_555 CU ? B CU . ? A CU 301 ? 1_555 SG ? A CYS 107 ? A CYS 233 ? 1_555 113.7 ? 4 ND1 ? A HIS 68 ? A HIS 194 ? 1_555 CU ? B CU . ? A CU 301 ? 1_555 SD ? A MET 114 ? A MET 240 ? 1_555 98.4 ? 5 SG ? A CYS 103 ? A CYS 229 ? 1_555 CU ? B CU . ? A CU 301 ? 1_555 SD ? A MET 114 ? A MET 240 ? 1_555 113.2 ? 6 SG ? A CYS 107 ? A CYS 233 ? 1_555 CU ? B CU . ? A CU 301 ? 1_555 SD ? A MET 114 ? A MET 240 ? 1_555 105.8 ? 7 ND1 ? A HIS 68 ? A HIS 194 ? 1_555 CU ? B CU . ? A CU 301 ? 1_555 CU ? C CU . ? A CU 302 ? 1_555 139.4 ? 8 SG ? A CYS 103 ? A CYS 229 ? 1_555 CU ? B CU . ? A CU 301 ? 1_555 CU ? C CU . ? A CU 302 ? 1_555 57.7 ? 9 SG ? A CYS 107 ? A CYS 233 ? 1_555 CU ? B CU . ? A CU 301 ? 1_555 CU ? C CU . ? A CU 302 ? 1_555 56.6 ? 10 SD ? A MET 114 ? A MET 240 ? 1_555 CU ? B CU . ? A CU 301 ? 1_555 CU ? C CU . ? A CU 302 ? 1_555 120.3 ? 11 SG ? A CYS 103 ? A CYS 229 ? 1_555 CU ? C CU . ? A CU 302 ? 1_555 O ? A GLU 105 ? A GLU 231 ? 1_555 90.5 ? 12 SG ? A CYS 103 ? A CYS 229 ? 1_555 CU ? C CU . ? A CU 302 ? 1_555 SG ? A CYS 107 ? A CYS 233 ? 1_555 116.5 ? 13 O ? A GLU 105 ? A GLU 231 ? 1_555 CU ? C CU . ? A CU 302 ? 1_555 SG ? A CYS 107 ? A CYS 233 ? 1_555 105.0 ? 14 SG ? A CYS 103 ? A CYS 229 ? 1_555 CU ? C CU . ? A CU 302 ? 1_555 ND1 ? A HIS 111 ? A HIS 237 ? 1_555 121.2 ? 15 O ? A GLU 105 ? A GLU 231 ? 1_555 CU ? C CU . ? A CU 302 ? 1_555 ND1 ? A HIS 111 ? A HIS 237 ? 1_555 93.6 ? 16 SG ? A CYS 107 ? A CYS 233 ? 1_555 CU ? C CU . ? A CU 302 ? 1_555 ND1 ? A HIS 111 ? A HIS 237 ? 1_555 118.7 ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 GLN 15 A . ? GLN 141 A TRP 16 A ? TRP 142 A 1 -0.61 2 GLN 39 A . ? GLN 165 A PRO 40 A ? PRO 166 A 1 -10.03 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 5 ? AA2 ? 5 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? parallel AA1 4 5 ? anti-parallel AA2 1 2 ? parallel AA2 2 3 ? anti-parallel AA2 3 4 ? anti-parallel AA2 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 GLU A 29 ? SER A 32 ? GLU A 155 SER A 158 AA1 2 TYR A 17 ? ALA A 21 ? TYR A 143 ALA A 147 AA1 3 LEU A 7 ? LYS A 14 ? LEU A 133 LYS A 140 AA1 4 VAL A 56 ? GLY A 63 ? VAL A 182 GLY A 189 AA1 5 ASN A 87 ? LYS A 92 ? ASN A 213 LYS A 218 AA2 1 MET A 49 ? PRO A 52 ? MET A 175 PRO A 178 AA2 2 ILE A 116 ? VAL A 121 ? ILE A 242 VAL A 247 AA2 3 GLY A 97 ? CYS A 103 ? GLY A 223 CYS A 229 AA2 4 HIS A 68 ? LEU A 72 ? HIS A 194 LEU A 198 AA2 5 VAL A 77 ? ALA A 81 ? VAL A 203 ALA A 207 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 O SER A 32 ? O SER A 158 N TRP A 18 ? N TRP A 144 AA1 2 3 O SER A 19 ? O SER A 145 N THR A 12 ? N THR A 138 AA1 3 4 N ALA A 11 ? N ALA A 137 O GLN A 60 ? O GLN A 186 AA1 4 5 N ILE A 57 ? N ILE A 183 O PHE A 91 ? O PHE A 217 AA2 1 2 N MET A 49 ? N MET A 175 O ALA A 117 ? O ALA A 243 AA2 2 3 O VAL A 120 ? O VAL A 246 N GLY A 97 ? N GLY A 223 AA2 3 4 O GLN A 102 ? O GLN A 228 N ALA A 71 ? N ALA A 197 AA2 4 5 N HIS A 68 ? N HIS A 194 O ALA A 81 ? O ALA A 207 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A CU 301 ? 5 'binding site for residue CU A 301' AC2 Software A CU 302 ? 5 'binding site for residue CU A 302' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 5 HIS A 68 ? HIS A 194 . ? 1_555 ? 2 AC1 5 CYS A 103 ? CYS A 229 . ? 1_555 ? 3 AC1 5 CYS A 107 ? CYS A 233 . ? 1_555 ? 4 AC1 5 MET A 114 ? MET A 240 . ? 1_555 ? 5 AC1 5 CU C . ? CU A 302 . ? 1_555 ? 6 AC2 5 CYS A 103 ? CYS A 229 . ? 1_555 ? 7 AC2 5 GLU A 105 ? GLU A 231 . ? 1_555 ? 8 AC2 5 CYS A 107 ? CYS A 233 . ? 1_555 ? 9 AC2 5 HIS A 111 ? HIS A 237 . ? 1_555 ? 10 AC2 5 CU B . ? CU A 301 . ? 1_555 ? # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O A HOH 515 ? ? O A HOH 631 ? ? 0.20 2 1 O A HOH 516 ? ? O A HOH 599 ? ? 0.25 3 1 O A HOH 521 ? ? O A HOH 645 ? ? 0.38 4 1 O A HOH 450 ? ? O A HOH 470 ? ? 0.47 5 1 O A HOH 452 ? ? O A HOH 479 ? ? 0.60 6 1 O A HOH 519 ? ? O A HOH 639 ? ? 0.67 7 1 O A HOH 517 ? ? O A HOH 600 ? ? 0.73 8 1 O A HOH 401 ? ? O A HOH 417 ? ? 0.80 9 1 O A HOH 539 ? ? O A HOH 647 ? ? 0.84 10 1 O A HOH 584 ? ? O A HOH 655 ? ? 0.85 11 1 O A HOH 522 ? ? O A HOH 652 ? ? 0.91 12 1 O A HOH 605 ? ? O A HOH 650 ? ? 1.02 13 1 O A HOH 403 ? ? O A HOH 419 ? ? 1.07 14 1 O A HOH 606 ? ? O A HOH 651 ? ? 1.13 15 1 O A HOH 517 ? ? O A HOH 640 ? ? 1.17 16 1 O A HOH 404 ? ? O A HOH 439 ? ? 1.18 17 1 O A HOH 475 ? ? O A HOH 496 ? ? 1.19 18 1 O A HOH 459 ? ? O A HOH 630 ? ? 1.33 19 1 O A HOH 601 ? ? O A HOH 653 ? ? 1.35 20 1 O A HOH 600 ? ? O A HOH 640 ? ? 1.54 21 1 O A HOH 437 ? ? O A HOH 536 ? ? 1.56 22 1 O A HOH 564 ? ? O A HOH 626 ? ? 1.61 23 1 O A HOH 524 ? ? O A HOH 620 ? ? 1.65 24 1 O A HOH 604 ? ? O A HOH 643 ? ? 1.67 25 1 O A HOH 586 ? ? O A HOH 649 ? ? 1.72 26 1 O A HOH 439 ? ? O A HOH 497 ? ? 1.73 27 1 O A HOH 547 ? ? O A HOH 653 ? ? 1.80 28 1 O A HOH 595 ? ? O A HOH 634 ? ? 1.93 29 1 O A HOH 437 ? ? O A HOH 489 ? ? 2.00 30 1 O A HOH 634 ? ? O A HOH 654 ? ? 2.02 31 1 O A HOH 476 ? ? O A HOH 591 ? ? 2.03 32 1 O A HOH 583 ? ? O A HOH 652 ? ? 2.06 33 1 NE2 A GLN 162 ? ? O A LYS 164 ? ? 2.11 34 1 O A THR 134 ? ? O A HOH 639 ? ? 2.15 35 1 O A HOH 644 ? ? O A HOH 654 ? ? 2.15 36 1 O A HOH 455 ? ? O A HOH 494 ? ? 2.17 # loop_ _pdbx_validate_symm_contact.id _pdbx_validate_symm_contact.PDB_model_num _pdbx_validate_symm_contact.auth_atom_id_1 _pdbx_validate_symm_contact.auth_asym_id_1 _pdbx_validate_symm_contact.auth_comp_id_1 _pdbx_validate_symm_contact.auth_seq_id_1 _pdbx_validate_symm_contact.PDB_ins_code_1 _pdbx_validate_symm_contact.label_alt_id_1 _pdbx_validate_symm_contact.site_symmetry_1 _pdbx_validate_symm_contact.auth_atom_id_2 _pdbx_validate_symm_contact.auth_asym_id_2 _pdbx_validate_symm_contact.auth_comp_id_2 _pdbx_validate_symm_contact.auth_seq_id_2 _pdbx_validate_symm_contact.PDB_ins_code_2 _pdbx_validate_symm_contact.label_alt_id_2 _pdbx_validate_symm_contact.site_symmetry_2 _pdbx_validate_symm_contact.dist 1 1 O A HOH 479 ? ? 1_555 O A HOH 495 ? ? 2_555 0.04 2 1 O A HOH 452 ? ? 1_555 O A HOH 495 ? ? 2_555 0.59 3 1 O A HOH 513 ? ? 1_555 O A HOH 542 ? ? 2_454 1.09 4 1 O A HOH 487 ? ? 1_555 O A HOH 502 ? ? 2_444 1.34 5 1 O A HOH 465 ? ? 1_555 O A HOH 494 ? ? 2_545 1.70 6 1 O A HOH 458 ? ? 1_555 O A HOH 502 ? ? 2_444 2.06 7 1 O A HOH 513 ? ? 1_555 O A HOH 541 ? ? 2_454 2.14 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 CG A GLU 174 ? A CD A GLU 174 ? A 1.416 1.515 -0.099 0.015 N 2 1 CB A GLU 214 ? ? CG A GLU 214 ? ? 1.394 1.517 -0.123 0.019 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 CB A ASP 132 ? ? CG A ASP 132 ? ? OD2 A ASP 132 ? ? 125.37 118.30 7.07 0.90 N 2 1 CA A LEU 133 ? ? CB A LEU 133 ? ? CG A LEU 133 ? ? 137.68 115.30 22.38 2.30 N 3 1 OE1 A GLU 174 ? A CD A GLU 174 ? A OE2 A GLU 174 ? A 132.56 123.30 9.26 1.20 N 4 1 CA A GLU 214 ? ? CB A GLU 214 ? ? CG A GLU 214 ? ? 129.00 113.40 15.60 2.20 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ALA A 161 ? ? -110.19 -75.45 2 1 LEU A 168 ? ? 71.78 -3.55 3 1 ASP A 191 ? ? -138.56 -74.32 4 1 CYS A 233 ? ? -142.36 21.83 # loop_ _pdbx_validate_peptide_omega.id _pdbx_validate_peptide_omega.PDB_model_num _pdbx_validate_peptide_omega.auth_comp_id_1 _pdbx_validate_peptide_omega.auth_asym_id_1 _pdbx_validate_peptide_omega.auth_seq_id_1 _pdbx_validate_peptide_omega.PDB_ins_code_1 _pdbx_validate_peptide_omega.label_alt_id_1 _pdbx_validate_peptide_omega.auth_comp_id_2 _pdbx_validate_peptide_omega.auth_asym_id_2 _pdbx_validate_peptide_omega.auth_seq_id_2 _pdbx_validate_peptide_omega.PDB_ins_code_2 _pdbx_validate_peptide_omega.label_alt_id_2 _pdbx_validate_peptide_omega.omega 1 1 GLN A 162 ? ? ASP A 163 ? ? 124.61 2 1 PHE A 263 ? ? ALA A 264 ? ? 135.32 # _pdbx_phasing_MR.entry_id 4W9Z _pdbx_phasing_MR.method_rotation ? _pdbx_phasing_MR.method_translation ? _pdbx_phasing_MR.model_details 'Phaser MODE: MR_AUTO' _pdbx_phasing_MR.R_factor ? _pdbx_phasing_MR.R_rigid_body ? _pdbx_phasing_MR.correlation_coeff_Fo_to_Fc ? _pdbx_phasing_MR.correlation_coeff_Io_to_Ic ? _pdbx_phasing_MR.d_res_high_rotation 1.190 _pdbx_phasing_MR.d_res_low_rotation 38.610 _pdbx_phasing_MR.d_res_high_translation 1.190 _pdbx_phasing_MR.d_res_low_translation 38.610 _pdbx_phasing_MR.packing ? _pdbx_phasing_MR.reflns_percent_rotation ? _pdbx_phasing_MR.reflns_percent_translation ? _pdbx_phasing_MR.sigma_F_rotation ? _pdbx_phasing_MR.sigma_F_translation ? _pdbx_phasing_MR.sigma_I_rotation ? _pdbx_phasing_MR.sigma_I_translation ? # _phasing.method MR # _pdbx_unobs_or_zero_occ_residues.id 1 _pdbx_unobs_or_zero_occ_residues.PDB_model_num 1 _pdbx_unobs_or_zero_occ_residues.polymer_flag Y _pdbx_unobs_or_zero_occ_residues.occupancy_flag 1 _pdbx_unobs_or_zero_occ_residues.auth_asym_id A _pdbx_unobs_or_zero_occ_residues.auth_comp_id SER _pdbx_unobs_or_zero_occ_residues.auth_seq_id 265 _pdbx_unobs_or_zero_occ_residues.PDB_ins_code ? _pdbx_unobs_or_zero_occ_residues.label_asym_id A _pdbx_unobs_or_zero_occ_residues.label_comp_id SER _pdbx_unobs_or_zero_occ_residues.label_seq_id 139 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CU CU CU N N 74 CYS N N N N 75 CYS CA C N R 76 CYS C C N N 77 CYS O O N N 78 CYS CB C N N 79 CYS SG S N N 80 CYS OXT O N N 81 CYS H H N N 82 CYS H2 H N N 83 CYS HA H N N 84 CYS HB2 H N N 85 CYS HB3 H N N 86 CYS HG H N N 87 CYS HXT H N N 88 GLN N N N N 89 GLN CA C N S 90 GLN C C N N 91 GLN O O N N 92 GLN CB C N N 93 GLN CG C N N 94 GLN CD C N N 95 GLN OE1 O N N 96 GLN NE2 N N N 97 GLN OXT O N N 98 GLN H H N N 99 GLN H2 H N N 100 GLN HA H N N 101 GLN HB2 H N N 102 GLN HB3 H N N 103 GLN HG2 H N N 104 GLN HG3 H N N 105 GLN HE21 H N N 106 GLN HE22 H N N 107 GLN HXT H N N 108 GLU N N N N 109 GLU CA C N S 110 GLU C C N N 111 GLU O O N N 112 GLU CB C N N 113 GLU CG C N N 114 GLU CD C N N 115 GLU OE1 O N N 116 GLU OE2 O N N 117 GLU OXT O N N 118 GLU H H N N 119 GLU H2 H N N 120 GLU HA H N N 121 GLU HB2 H N N 122 GLU HB3 H N N 123 GLU HG2 H N N 124 GLU HG3 H N N 125 GLU HE2 H N N 126 GLU HXT H N N 127 GLY N N N N 128 GLY CA C N N 129 GLY C C N N 130 GLY O O N N 131 GLY OXT O N N 132 GLY H H N N 133 GLY H2 H N N 134 GLY HA2 H N N 135 GLY HA3 H N N 136 GLY HXT H N N 137 HIS N N N N 138 HIS CA C N S 139 HIS C C N N 140 HIS O O N N 141 HIS CB C N N 142 HIS CG C Y N 143 HIS ND1 N Y N 144 HIS CD2 C Y N 145 HIS CE1 C Y N 146 HIS NE2 N Y N 147 HIS OXT O N N 148 HIS H H N N 149 HIS H2 H N N 150 HIS HA H N N 151 HIS HB2 H N N 152 HIS HB3 H N N 153 HIS HD1 H N N 154 HIS HD2 H N N 155 HIS HE1 H N N 156 HIS HE2 H N N 157 HIS HXT H N N 158 HOH O O N N 159 HOH H1 H N N 160 HOH H2 H N N 161 ILE N N N N 162 ILE CA C N S 163 ILE C C N N 164 ILE O O N N 165 ILE CB C N S 166 ILE CG1 C N N 167 ILE CG2 C N N 168 ILE CD1 C N N 169 ILE OXT O N N 170 ILE H H N N 171 ILE H2 H N N 172 ILE HA H N N 173 ILE HB H N N 174 ILE HG12 H N N 175 ILE HG13 H N N 176 ILE HG21 H N N 177 ILE HG22 H N N 178 ILE HG23 H N N 179 ILE HD11 H N N 180 ILE HD12 H N N 181 ILE HD13 H N N 182 ILE HXT H N N 183 LEU N N N N 184 LEU CA C N S 185 LEU C C N N 186 LEU O O N N 187 LEU CB C N N 188 LEU CG C N N 189 LEU CD1 C N N 190 LEU CD2 C N N 191 LEU OXT O N N 192 LEU H H N N 193 LEU H2 H N N 194 LEU HA H N N 195 LEU HB2 H N N 196 LEU HB3 H N N 197 LEU HG H N N 198 LEU HD11 H N N 199 LEU HD12 H N N 200 LEU HD13 H N N 201 LEU HD21 H N N 202 LEU HD22 H N N 203 LEU HD23 H N N 204 LEU HXT H N N 205 LYS N N N N 206 LYS CA C N S 207 LYS C C N N 208 LYS O O N N 209 LYS CB C N N 210 LYS CG C N N 211 LYS CD C N N 212 LYS CE C N N 213 LYS NZ N N N 214 LYS OXT O N N 215 LYS H H N N 216 LYS H2 H N N 217 LYS HA H N N 218 LYS HB2 H N N 219 LYS HB3 H N N 220 LYS HG2 H N N 221 LYS HG3 H N N 222 LYS HD2 H N N 223 LYS HD3 H N N 224 LYS HE2 H N N 225 LYS HE3 H N N 226 LYS HZ1 H N N 227 LYS HZ2 H N N 228 LYS HZ3 H N N 229 LYS HXT H N N 230 MET N N N N 231 MET CA C N S 232 MET C C N N 233 MET O O N N 234 MET CB C N N 235 MET CG C N N 236 MET SD S N N 237 MET CE C N N 238 MET OXT O N N 239 MET H H N N 240 MET H2 H N N 241 MET HA H N N 242 MET HB2 H N N 243 MET HB3 H N N 244 MET HG2 H N N 245 MET HG3 H N N 246 MET HE1 H N N 247 MET HE2 H N N 248 MET HE3 H N N 249 MET HXT H N N 250 PHE N N N N 251 PHE CA C N S 252 PHE C C N N 253 PHE O O N N 254 PHE CB C N N 255 PHE CG C Y N 256 PHE CD1 C Y N 257 PHE CD2 C Y N 258 PHE CE1 C Y N 259 PHE CE2 C Y N 260 PHE CZ C Y N 261 PHE OXT O N N 262 PHE H H N N 263 PHE H2 H N N 264 PHE HA H N N 265 PHE HB2 H N N 266 PHE HB3 H N N 267 PHE HD1 H N N 268 PHE HD2 H N N 269 PHE HE1 H N N 270 PHE HE2 H N N 271 PHE HZ H N N 272 PHE HXT H N N 273 PRO N N N N 274 PRO CA C N S 275 PRO C C N N 276 PRO O O N N 277 PRO CB C N N 278 PRO CG C N N 279 PRO CD C N N 280 PRO OXT O N N 281 PRO H H N N 282 PRO HA H N N 283 PRO HB2 H N N 284 PRO HB3 H N N 285 PRO HG2 H N N 286 PRO HG3 H N N 287 PRO HD2 H N N 288 PRO HD3 H N N 289 PRO HXT H N N 290 SER N N N N 291 SER CA C N S 292 SER C C N N 293 SER O O N N 294 SER CB C N N 295 SER OG O N N 296 SER OXT O N N 297 SER H H N N 298 SER H2 H N N 299 SER HA H N N 300 SER HB2 H N N 301 SER HB3 H N N 302 SER HG H N N 303 SER HXT H N N 304 THR N N N N 305 THR CA C N S 306 THR C C N N 307 THR O O N N 308 THR CB C N R 309 THR OG1 O N N 310 THR CG2 C N N 311 THR OXT O N N 312 THR H H N N 313 THR H2 H N N 314 THR HA H N N 315 THR HB H N N 316 THR HG1 H N N 317 THR HG21 H N N 318 THR HG22 H N N 319 THR HG23 H N N 320 THR HXT H N N 321 TRP N N N N 322 TRP CA C N S 323 TRP C C N N 324 TRP O O N N 325 TRP CB C N N 326 TRP CG C Y N 327 TRP CD1 C Y N 328 TRP CD2 C Y N 329 TRP NE1 N Y N 330 TRP CE2 C Y N 331 TRP CE3 C Y N 332 TRP CZ2 C Y N 333 TRP CZ3 C Y N 334 TRP CH2 C Y N 335 TRP OXT O N N 336 TRP H H N N 337 TRP H2 H N N 338 TRP HA H N N 339 TRP HB2 H N N 340 TRP HB3 H N N 341 TRP HD1 H N N 342 TRP HE1 H N N 343 TRP HE3 H N N 344 TRP HZ2 H N N 345 TRP HZ3 H N N 346 TRP HH2 H N N 347 TRP HXT H N N 348 TYR N N N N 349 TYR CA C N S 350 TYR C C N N 351 TYR O O N N 352 TYR CB C N N 353 TYR CG C Y N 354 TYR CD1 C Y N 355 TYR CD2 C Y N 356 TYR CE1 C Y N 357 TYR CE2 C Y N 358 TYR CZ C Y N 359 TYR OH O N N 360 TYR OXT O N N 361 TYR H H N N 362 TYR H2 H N N 363 TYR HA H N N 364 TYR HB2 H N N 365 TYR HB3 H N N 366 TYR HD1 H N N 367 TYR HD2 H N N 368 TYR HE1 H N N 369 TYR HE2 H N N 370 TYR HH H N N 371 TYR HXT H N N 372 VAL N N N N 373 VAL CA C N S 374 VAL C C N N 375 VAL O O N N 376 VAL CB C N N 377 VAL CG1 C N N 378 VAL CG2 C N N 379 VAL OXT O N N 380 VAL H H N N 381 VAL H2 H N N 382 VAL HA H N N 383 VAL HB H N N 384 VAL HG11 H N N 385 VAL HG12 H N N 386 VAL HG13 H N N 387 VAL HG21 H N N 388 VAL HG22 H N N 389 VAL HG23 H N N 390 VAL HXT H N N 391 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 HOH O H1 sing N N 150 HOH O H2 sing N N 151 ILE N CA sing N N 152 ILE N H sing N N 153 ILE N H2 sing N N 154 ILE CA C sing N N 155 ILE CA CB sing N N 156 ILE CA HA sing N N 157 ILE C O doub N N 158 ILE C OXT sing N N 159 ILE CB CG1 sing N N 160 ILE CB CG2 sing N N 161 ILE CB HB sing N N 162 ILE CG1 CD1 sing N N 163 ILE CG1 HG12 sing N N 164 ILE CG1 HG13 sing N N 165 ILE CG2 HG21 sing N N 166 ILE CG2 HG22 sing N N 167 ILE CG2 HG23 sing N N 168 ILE CD1 HD11 sing N N 169 ILE CD1 HD12 sing N N 170 ILE CD1 HD13 sing N N 171 ILE OXT HXT sing N N 172 LEU N CA sing N N 173 LEU N H sing N N 174 LEU N H2 sing N N 175 LEU CA C sing N N 176 LEU CA CB sing N N 177 LEU CA HA sing N N 178 LEU C O doub N N 179 LEU C OXT sing N N 180 LEU CB CG sing N N 181 LEU CB HB2 sing N N 182 LEU CB HB3 sing N N 183 LEU CG CD1 sing N N 184 LEU CG CD2 sing N N 185 LEU CG HG sing N N 186 LEU CD1 HD11 sing N N 187 LEU CD1 HD12 sing N N 188 LEU CD1 HD13 sing N N 189 LEU CD2 HD21 sing N N 190 LEU CD2 HD22 sing N N 191 LEU CD2 HD23 sing N N 192 LEU OXT HXT sing N N 193 LYS N CA sing N N 194 LYS N H sing N N 195 LYS N H2 sing N N 196 LYS CA C sing N N 197 LYS CA CB sing N N 198 LYS CA HA sing N N 199 LYS C O doub N N 200 LYS C OXT sing N N 201 LYS CB CG sing N N 202 LYS CB HB2 sing N N 203 LYS CB HB3 sing N N 204 LYS CG CD sing N N 205 LYS CG HG2 sing N N 206 LYS CG HG3 sing N N 207 LYS CD CE sing N N 208 LYS CD HD2 sing N N 209 LYS CD HD3 sing N N 210 LYS CE NZ sing N N 211 LYS CE HE2 sing N N 212 LYS CE HE3 sing N N 213 LYS NZ HZ1 sing N N 214 LYS NZ HZ2 sing N N 215 LYS NZ HZ3 sing N N 216 LYS OXT HXT sing N N 217 MET N CA sing N N 218 MET N H sing N N 219 MET N H2 sing N N 220 MET CA C sing N N 221 MET CA CB sing N N 222 MET CA HA sing N N 223 MET C O doub N N 224 MET C OXT sing N N 225 MET CB CG sing N N 226 MET CB HB2 sing N N 227 MET CB HB3 sing N N 228 MET CG SD sing N N 229 MET CG HG2 sing N N 230 MET CG HG3 sing N N 231 MET SD CE sing N N 232 MET CE HE1 sing N N 233 MET CE HE2 sing N N 234 MET CE HE3 sing N N 235 MET OXT HXT sing N N 236 PHE N CA sing N N 237 PHE N H sing N N 238 PHE N H2 sing N N 239 PHE CA C sing N N 240 PHE CA CB sing N N 241 PHE CA HA sing N N 242 PHE C O doub N N 243 PHE C OXT sing N N 244 PHE CB CG sing N N 245 PHE CB HB2 sing N N 246 PHE CB HB3 sing N N 247 PHE CG CD1 doub Y N 248 PHE CG CD2 sing Y N 249 PHE CD1 CE1 sing Y N 250 PHE CD1 HD1 sing N N 251 PHE CD2 CE2 doub Y N 252 PHE CD2 HD2 sing N N 253 PHE CE1 CZ doub Y N 254 PHE CE1 HE1 sing N N 255 PHE CE2 CZ sing Y N 256 PHE CE2 HE2 sing N N 257 PHE CZ HZ sing N N 258 PHE OXT HXT sing N N 259 PRO N CA sing N N 260 PRO N CD sing N N 261 PRO N H sing N N 262 PRO CA C sing N N 263 PRO CA CB sing N N 264 PRO CA HA sing N N 265 PRO C O doub N N 266 PRO C OXT sing N N 267 PRO CB CG sing N N 268 PRO CB HB2 sing N N 269 PRO CB HB3 sing N N 270 PRO CG CD sing N N 271 PRO CG HG2 sing N N 272 PRO CG HG3 sing N N 273 PRO CD HD2 sing N N 274 PRO CD HD3 sing N N 275 PRO OXT HXT sing N N 276 SER N CA sing N N 277 SER N H sing N N 278 SER N H2 sing N N 279 SER CA C sing N N 280 SER CA CB sing N N 281 SER CA HA sing N N 282 SER C O doub N N 283 SER C OXT sing N N 284 SER CB OG sing N N 285 SER CB HB2 sing N N 286 SER CB HB3 sing N N 287 SER OG HG sing N N 288 SER OXT HXT sing N N 289 THR N CA sing N N 290 THR N H sing N N 291 THR N H2 sing N N 292 THR CA C sing N N 293 THR CA CB sing N N 294 THR CA HA sing N N 295 THR C O doub N N 296 THR C OXT sing N N 297 THR CB OG1 sing N N 298 THR CB CG2 sing N N 299 THR CB HB sing N N 300 THR OG1 HG1 sing N N 301 THR CG2 HG21 sing N N 302 THR CG2 HG22 sing N N 303 THR CG2 HG23 sing N N 304 THR OXT HXT sing N N 305 TRP N CA sing N N 306 TRP N H sing N N 307 TRP N H2 sing N N 308 TRP CA C sing N N 309 TRP CA CB sing N N 310 TRP CA HA sing N N 311 TRP C O doub N N 312 TRP C OXT sing N N 313 TRP CB CG sing N N 314 TRP CB HB2 sing N N 315 TRP CB HB3 sing N N 316 TRP CG CD1 doub Y N 317 TRP CG CD2 sing Y N 318 TRP CD1 NE1 sing Y N 319 TRP CD1 HD1 sing N N 320 TRP CD2 CE2 doub Y N 321 TRP CD2 CE3 sing Y N 322 TRP NE1 CE2 sing Y N 323 TRP NE1 HE1 sing N N 324 TRP CE2 CZ2 sing Y N 325 TRP CE3 CZ3 doub Y N 326 TRP CE3 HE3 sing N N 327 TRP CZ2 CH2 doub Y N 328 TRP CZ2 HZ2 sing N N 329 TRP CZ3 CH2 sing Y N 330 TRP CZ3 HZ3 sing N N 331 TRP CH2 HH2 sing N N 332 TRP OXT HXT sing N N 333 TYR N CA sing N N 334 TYR N H sing N N 335 TYR N H2 sing N N 336 TYR CA C sing N N 337 TYR CA CB sing N N 338 TYR CA HA sing N N 339 TYR C O doub N N 340 TYR C OXT sing N N 341 TYR CB CG sing N N 342 TYR CB HB2 sing N N 343 TYR CB HB3 sing N N 344 TYR CG CD1 doub Y N 345 TYR CG CD2 sing Y N 346 TYR CD1 CE1 sing Y N 347 TYR CD1 HD1 sing N N 348 TYR CD2 CE2 doub Y N 349 TYR CD2 HD2 sing N N 350 TYR CE1 CZ doub Y N 351 TYR CE1 HE1 sing N N 352 TYR CE2 CZ sing Y N 353 TYR CE2 HE2 sing N N 354 TYR CZ OH sing N N 355 TYR OH HH sing N N 356 TYR OXT HXT sing N N 357 VAL N CA sing N N 358 VAL N H sing N N 359 VAL N H2 sing N N 360 VAL CA C sing N N 361 VAL CA CB sing N N 362 VAL CA HA sing N N 363 VAL C O doub N N 364 VAL C OXT sing N N 365 VAL CB CG1 sing N N 366 VAL CB CG2 sing N N 367 VAL CB HB sing N N 368 VAL CG1 HG11 sing N N 369 VAL CG1 HG12 sing N N 370 VAL CG1 HG13 sing N N 371 VAL CG2 HG21 sing N N 372 VAL CG2 HG22 sing N N 373 VAL CG2 HG23 sing N N 374 VAL OXT HXT sing N N 375 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 4TXV _pdbx_initial_refinement_model.details ? # _atom_sites.entry_id 4W9Z _atom_sites.fract_transf_matrix[1][1] 0.030835 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.004133 _atom_sites.fract_transf_matrix[2][1] -0.000000 _atom_sites.fract_transf_matrix[2][2] 0.025899 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] -0.000000 _atom_sites.fract_transf_matrix[3][3] 0.016916 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C CU N O S # loop_