HEADER LIGASE 06-SEP-14 4WD3 TITLE CRYSTAL STRUCTURE OF AN L-AMINO ACID LIGASE RIZA COMPND MOL_ID: 1; COMPND 2 MOLECULE: L-AMINO ACID LIGASE; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES; COMPND 5 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACILLUS SUBTILIS SUBSP. SUBTILIS; SOURCE 3 ORGANISM_TAXID: 135461; SOURCE 4 STRAIN: STR. 168; SOURCE 5 GENE: RIZA; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: B834(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET21D KEYWDS L-AMINO ACID LIGASE, ATP-GRASP DOMAIN, RHIZOCTICIN ANTIBIOTIC KEYWDS 2 BIOSYNTHESIS, LIGASE EXPDTA X-RAY DIFFRACTION AUTHOR W.KAGAWA,T.ARAI,K.KINO,H.KURUMIZAKA REVDAT 2 01-JAN-20 4WD3 1 JRNL REMARK REVDAT 1 09-SEP-15 4WD3 0 JRNL AUTH W.KAGAWA,T.ARAI,S.ISHIKURA,K.KINO,H.KURUMIZAKA JRNL TITL STRUCTURE OF RIZA, AN L-AMINO-ACID LIGASE FROM BACILLUS JRNL TITL 2 SUBTILIS. JRNL REF ACTA CRYSTALLOGR.,SECT.F V. 71 1125 2015 JRNL REFN ESSN 2053-230X JRNL PMID 26323296 JRNL DOI 10.1107/S2053230X15012698 REMARK 2 REMARK 2 RESOLUTION. 2.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.9_1692) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.24 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 2.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.4 REMARK 3 NUMBER OF REFLECTIONS : 20503 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.204 REMARK 3 R VALUE (WORKING SET) : 0.201 REMARK 3 FREE R VALUE : 0.255 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.150 REMARK 3 FREE R VALUE TEST SET COUNT : 1056 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 48.2448 - 5.5976 0.97 2492 126 0.1921 0.2441 REMARK 3 2 5.5976 - 4.4439 0.99 2479 138 0.1786 0.1939 REMARK 3 3 4.4439 - 3.8825 0.99 2444 132 0.1840 0.2496 REMARK 3 4 3.8825 - 3.5276 0.99 2467 140 0.1980 0.2652 REMARK 3 5 3.5276 - 3.2748 0.99 2450 122 0.2089 0.2453 REMARK 3 6 3.2748 - 3.0818 0.98 2410 139 0.2384 0.3051 REMARK 3 7 3.0818 - 2.9275 0.96 2365 125 0.2314 0.3176 REMARK 3 8 2.9275 - 2.8001 0.94 2340 134 0.2418 0.3105 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.350 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 25.340 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.002 6238 REMARK 3 ANGLE : 0.678 8450 REMARK 3 CHIRALITY : 0.026 972 REMARK 3 PLANARITY : 0.003 1066 REMARK 3 DIHEDRAL : 11.593 2292 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4WD3 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 17-SEP-14. REMARK 100 THE DEPOSITION ID IS D_1000203534. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 05-MAR-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.8 REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PHOTON FACTORY REMARK 200 BEAMLINE : BL-17A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9788 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 20941 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.800 REMARK 200 RESOLUTION RANGE LOW (A) : 48.240 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 200 DATA REDUNDANCY : 7.300 REMARK 200 R MERGE (I) : 0.09100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 15.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.95 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.7 REMARK 200 DATA REDUNDANCY IN SHELL : 7.40 REMARK 200 R MERGE FOR SHELL (I) : 0.29400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 7.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.32 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: SODIUM HEPES, MAGNESIUM CHLORIDE, REMARK 280 POLYETHYLENE GLYCOL 3350, SODIUM IODIDE, PH 6.8, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 43.64500 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2480 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 35210 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -15.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 VAL A 222 REMARK 465 PRO A 223 REMARK 465 LEU A 224 REMARK 465 LEU A 225 REMARK 465 LYS A 226 REMARK 465 GLY A 227 REMARK 465 MSE A 228 REMARK 465 ALA A 229 REMARK 465 LYS A 230 REMARK 465 ASP A 368 REMARK 465 GLU A 369 REMARK 465 LYS A 370 REMARK 465 GLN A 371 REMARK 465 SER A 372 REMARK 465 SER A 373 REMARK 465 SER A 374 REMARK 465 PHE A 375 REMARK 465 THR A 406 REMARK 465 GLU A 407 REMARK 465 ASP A 408 REMARK 465 HIS A 409 REMARK 465 MSE A 410 REMARK 465 MSE A 411 REMARK 465 ASN A 412 REMARK 465 GLN A 413 REMARK 465 VAL B 222 REMARK 465 PRO B 223 REMARK 465 LEU B 224 REMARK 465 LEU B 225 REMARK 465 LYS B 226 REMARK 465 GLY B 227 REMARK 465 MSE B 228 REMARK 465 ALA B 229 REMARK 465 LYS B 230 REMARK 465 ASP B 368 REMARK 465 GLU B 369 REMARK 465 LYS B 370 REMARK 465 GLN B 371 REMARK 465 SER B 372 REMARK 465 SER B 373 REMARK 465 SER B 374 REMARK 465 PHE B 375 REMARK 465 THR B 406 REMARK 465 GLU B 407 REMARK 465 ASP B 408 REMARK 465 HIS B 409 REMARK 465 MSE B 410 REMARK 465 MSE B 411 REMARK 465 ASN B 412 REMARK 465 GLN B 413 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NZ LYS A 115 O GLY A 280 2.12 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 9 -85.76 -98.97 REMARK 500 TRP A 45 -32.88 -135.48 REMARK 500 ASP A 57 97.13 -67.36 REMARK 500 THR A 109 -61.12 -134.81 REMARK 500 CYS A 195 95.25 -63.56 REMARK 500 MSE A 198 -144.30 -131.81 REMARK 500 SER B 9 -85.48 -98.97 REMARK 500 TRP B 45 -32.93 -135.70 REMARK 500 ASP B 57 96.20 -66.74 REMARK 500 THR B 109 -60.57 -133.41 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3VMM RELATED DB: PDB REMARK 900 RELATED ID: 3VOT RELATED DB: PDB DBREF 4WD3 A 1 413 UNP B5UAT8 B5UAT8_BACIU 1 413 DBREF 4WD3 B 1 413 UNP B5UAT8 B5UAT8_BACIU 1 413 SEQADV 4WD3 VAL A 2 UNP B5UAT8 LEU 2 ENGINEERED MUTATION SEQADV 4WD3 ILE A 74 UNP B5UAT8 PHE 74 ENGINEERED MUTATION SEQADV 4WD3 VAL B 2 UNP B5UAT8 LEU 2 ENGINEERED MUTATION SEQADV 4WD3 ILE B 74 UNP B5UAT8 PHE 74 ENGINEERED MUTATION SEQRES 1 A 413 MSE VAL ARG ILE LEU LEU ILE ASN SER ASP LYS PRO GLU SEQRES 2 A 413 PRO ILE GLN PHE PHE GLN LYS ASP LYS GLU THR ASN ASP SEQRES 3 A 413 SER ILE ASN ILE SER VAL ILE THR ARG SER CYS TYR ALA SEQRES 4 A 413 PRO LEU TYR SER HIS TRP ALA ASP HIS VAL TYR ILE VAL SEQRES 5 A 413 ASP ASP VAL THR ASP LEU THR VAL MSE LYS SER LEU MSE SEQRES 6 A 413 LEU GLU ILE LEU LYS VAL GLY PRO ILE ASP HIS ILE VAL SEQRES 7 A 413 SER THR THR GLU LYS SER ILE LEU THR GLY GLY PHE LEU SEQRES 8 A 413 ARG SER TYR PHE GLY ILE ALA GLY PRO GLY PHE GLU THR SEQRES 9 A 413 ALA LEU TYR MSE THR ASN LYS LEU ALA MSE LYS THR LYS SEQRES 10 A 413 LEU LYS MSE GLU GLY ILE PRO VAL ALA ASP PHE LEU CYS SEQRES 11 A 413 VAL SER GLN VAL GLU ASP ILE PRO ALA ALA GLY GLU LYS SEQRES 12 A 413 LEU GLY TRP PRO ILE ILE VAL LYS PRO ALA LEU GLY SER SEQRES 13 A 413 GLY ALA LEU ASN THR PHE ILE ILE HIS SER LEU ASP HIS SEQRES 14 A 413 TYR GLU ASP LEU TYR SER THR SER GLY GLY LEU GLY GLU SEQRES 15 A 413 LEU LYS LYS ASN ASN SER LEU MSE ILE ALA GLU LYS CYS SEQRES 16 A 413 ILE GLU MSE GLU GLU PHE HIS CYS ASP THR LEU TYR ALA SEQRES 17 A 413 ASP GLY GLU ILE LEU PHE VAL SER ILE SER LYS TYR THR SEQRES 18 A 413 VAL PRO LEU LEU LYS GLY MSE ALA LYS ILE GLN GLY SER SEQRES 19 A 413 PHE ILE LEU SER GLN ASN ASP PRO VAL TYR ALA GLU ILE SEQRES 20 A 413 LEU GLU LEU GLN LYS SER VAL ALA GLN ALA PHE ARG ILE SEQRES 21 A 413 THR ASP GLY PRO GLY HIS LEU GLU ILE TYR ARG THR HIS SEQRES 22 A 413 SER GLY GLU LEU ILE VAL GLY GLU ILE ALA MSE ARG ILE SEQRES 23 A 413 GLY GLY GLY GLY ILE SER ARG MSE ILE GLU LYS LYS PHE SEQRES 24 A 413 ASN ILE SER LEU TRP GLU SER SER LEU ASN ILE SER VAL SEQRES 25 A 413 TYR ARG ASP PRO ASN LEU THR VAL ASN PRO ILE GLU GLY SEQRES 26 A 413 THR VAL GLY TYR PHE SER LEU PRO CYS ARG ASN GLY THR SEQRES 27 A 413 ILE LYS GLU PHE THR PRO ILE GLU GLU TRP GLU LYS LEU SEQRES 28 A 413 ALA GLY ILE LEU GLU VAL GLU LEU LEU TYR GLN GLU GLY SEQRES 29 A 413 ASP VAL VAL ASP GLU LYS GLN SER SER SER PHE ASP LEU SEQRES 30 A 413 ALA ARG LEU TYR PHE CYS LEU GLU ASN GLU ASN GLU VAL SEQRES 31 A 413 GLN HIS LEU LEU ALA LEU VAL LYS GLN THR TYR TYR LEU SEQRES 32 A 413 HIS LEU THR GLU ASP HIS MSE MSE ASN GLN SEQRES 1 B 413 MSE VAL ARG ILE LEU LEU ILE ASN SER ASP LYS PRO GLU SEQRES 2 B 413 PRO ILE GLN PHE PHE GLN LYS ASP LYS GLU THR ASN ASP SEQRES 3 B 413 SER ILE ASN ILE SER VAL ILE THR ARG SER CYS TYR ALA SEQRES 4 B 413 PRO LEU TYR SER HIS TRP ALA ASP HIS VAL TYR ILE VAL SEQRES 5 B 413 ASP ASP VAL THR ASP LEU THR VAL MSE LYS SER LEU MSE SEQRES 6 B 413 LEU GLU ILE LEU LYS VAL GLY PRO ILE ASP HIS ILE VAL SEQRES 7 B 413 SER THR THR GLU LYS SER ILE LEU THR GLY GLY PHE LEU SEQRES 8 B 413 ARG SER TYR PHE GLY ILE ALA GLY PRO GLY PHE GLU THR SEQRES 9 B 413 ALA LEU TYR MSE THR ASN LYS LEU ALA MSE LYS THR LYS SEQRES 10 B 413 LEU LYS MSE GLU GLY ILE PRO VAL ALA ASP PHE LEU CYS SEQRES 11 B 413 VAL SER GLN VAL GLU ASP ILE PRO ALA ALA GLY GLU LYS SEQRES 12 B 413 LEU GLY TRP PRO ILE ILE VAL LYS PRO ALA LEU GLY SER SEQRES 13 B 413 GLY ALA LEU ASN THR PHE ILE ILE HIS SER LEU ASP HIS SEQRES 14 B 413 TYR GLU ASP LEU TYR SER THR SER GLY GLY LEU GLY GLU SEQRES 15 B 413 LEU LYS LYS ASN ASN SER LEU MSE ILE ALA GLU LYS CYS SEQRES 16 B 413 ILE GLU MSE GLU GLU PHE HIS CYS ASP THR LEU TYR ALA SEQRES 17 B 413 ASP GLY GLU ILE LEU PHE VAL SER ILE SER LYS TYR THR SEQRES 18 B 413 VAL PRO LEU LEU LYS GLY MSE ALA LYS ILE GLN GLY SER SEQRES 19 B 413 PHE ILE LEU SER GLN ASN ASP PRO VAL TYR ALA GLU ILE SEQRES 20 B 413 LEU GLU LEU GLN LYS SER VAL ALA GLN ALA PHE ARG ILE SEQRES 21 B 413 THR ASP GLY PRO GLY HIS LEU GLU ILE TYR ARG THR HIS SEQRES 22 B 413 SER GLY GLU LEU ILE VAL GLY GLU ILE ALA MSE ARG ILE SEQRES 23 B 413 GLY GLY GLY GLY ILE SER ARG MSE ILE GLU LYS LYS PHE SEQRES 24 B 413 ASN ILE SER LEU TRP GLU SER SER LEU ASN ILE SER VAL SEQRES 25 B 413 TYR ARG ASP PRO ASN LEU THR VAL ASN PRO ILE GLU GLY SEQRES 26 B 413 THR VAL GLY TYR PHE SER LEU PRO CYS ARG ASN GLY THR SEQRES 27 B 413 ILE LYS GLU PHE THR PRO ILE GLU GLU TRP GLU LYS LEU SEQRES 28 B 413 ALA GLY ILE LEU GLU VAL GLU LEU LEU TYR GLN GLU GLY SEQRES 29 B 413 ASP VAL VAL ASP GLU LYS GLN SER SER SER PHE ASP LEU SEQRES 30 B 413 ALA ARG LEU TYR PHE CYS LEU GLU ASN GLU ASN GLU VAL SEQRES 31 B 413 GLN HIS LEU LEU ALA LEU VAL LYS GLN THR TYR TYR LEU SEQRES 32 B 413 HIS LEU THR GLU ASP HIS MSE MSE ASN GLN MODRES 4WD3 MSE A 1 MET MODIFIED RESIDUE MODRES 4WD3 MSE A 61 MET MODIFIED RESIDUE MODRES 4WD3 MSE A 65 MET MODIFIED RESIDUE MODRES 4WD3 MSE A 108 MET MODIFIED RESIDUE MODRES 4WD3 MSE A 114 MET MODIFIED RESIDUE MODRES 4WD3 MSE A 120 MET MODIFIED RESIDUE MODRES 4WD3 MSE A 190 MET MODIFIED RESIDUE MODRES 4WD3 MSE A 198 MET MODIFIED RESIDUE MODRES 4WD3 MSE A 284 MET MODIFIED RESIDUE MODRES 4WD3 MSE A 294 MET MODIFIED RESIDUE MODRES 4WD3 MSE B 1 MET MODIFIED RESIDUE MODRES 4WD3 MSE B 61 MET MODIFIED RESIDUE MODRES 4WD3 MSE B 65 MET MODIFIED RESIDUE MODRES 4WD3 MSE B 108 MET MODIFIED RESIDUE MODRES 4WD3 MSE B 114 MET MODIFIED RESIDUE MODRES 4WD3 MSE B 120 MET MODIFIED RESIDUE MODRES 4WD3 MSE B 190 MET MODIFIED RESIDUE MODRES 4WD3 MSE B 198 MET MODIFIED RESIDUE MODRES 4WD3 MSE B 284 MET MODIFIED RESIDUE MODRES 4WD3 MSE B 294 MET MODIFIED RESIDUE HET MSE A 1 8 HET MSE A 61 8 HET MSE A 65 8 HET MSE A 108 8 HET MSE A 114 8 HET MSE A 120 8 HET MSE A 190 8 HET MSE A 198 8 HET MSE A 284 8 HET MSE A 294 8 HET MSE B 1 8 HET MSE B 61 8 HET MSE B 65 8 HET MSE B 108 8 HET MSE B 114 8 HET MSE B 120 8 HET MSE B 190 8 HET MSE B 198 8 HET MSE B 284 8 HET MSE B 294 8 HETNAM MSE SELENOMETHIONINE FORMUL 1 MSE 20(C5 H11 N O2 SE) HELIX 1 AA1 LYS A 11 ASN A 25 1 15 HELIX 2 AA2 ARG A 35 TYR A 42 5 8 HELIX 3 AA3 ASP A 57 GLY A 72 1 16 HELIX 4 AA4 THR A 81 LYS A 83 5 3 HELIX 5 AA5 SER A 84 PHE A 95 1 12 HELIX 6 AA6 GLY A 101 MSE A 108 1 8 HELIX 7 AA7 ASN A 110 GLY A 122 1 13 HELIX 8 AA8 GLN A 133 GLU A 135 5 3 HELIX 9 AA9 ASP A 136 GLY A 145 1 10 HELIX 10 AB1 SER A 166 THR A 176 1 11 HELIX 11 AB2 LEU A 180 ASN A 186 5 7 HELIX 12 AB3 VAL A 243 PHE A 258 1 16 HELIX 13 AB4 GLY A 289 ASN A 300 1 12 HELIX 14 AB5 SER A 302 VAL A 312 1 11 HELIX 15 AB6 PRO A 344 LYS A 350 1 7 HELIX 16 AB7 GLU A 387 TYR A 401 1 15 HELIX 17 AB8 LYS B 11 ASN B 25 1 15 HELIX 18 AB9 ARG B 35 TYR B 42 5 8 HELIX 19 AC1 ASP B 57 GLY B 72 1 16 HELIX 20 AC2 LYS B 83 PHE B 95 1 13 HELIX 21 AC3 GLY B 101 TYR B 107 1 7 HELIX 22 AC4 ASN B 110 GLY B 122 1 13 HELIX 23 AC5 GLN B 133 GLU B 135 5 3 HELIX 24 AC6 ASP B 136 GLY B 145 1 10 HELIX 25 AC7 SER B 166 THR B 176 1 11 HELIX 26 AC8 GLU B 182 ASN B 186 5 5 HELIX 27 AC9 VAL B 243 PHE B 258 1 16 HELIX 28 AD1 GLY B 290 ASN B 300 1 11 HELIX 29 AD2 SER B 302 VAL B 312 1 11 HELIX 30 AD3 PRO B 344 LEU B 351 1 8 HELIX 31 AD4 ASN B 386 TYR B 401 1 16 SHEET 1 AA1 4 HIS A 48 ILE A 51 0 SHEET 2 AA1 4 ILE A 28 THR A 34 1 N VAL A 32 O TYR A 50 SHEET 3 AA1 4 VAL A 2 ILE A 7 1 N LEU A 6 O SER A 31 SHEET 4 AA1 4 HIS A 76 SER A 79 1 O VAL A 78 N LEU A 5 SHEET 1 AA2 4 LEU A 129 VAL A 131 0 SHEET 2 AA2 4 MSE A 190 LYS A 194 -1 O MSE A 190 N VAL A 131 SHEET 3 AA2 4 ILE A 148 PRO A 152 -1 N LYS A 151 O ILE A 191 SHEET 4 AA2 4 PHE A 162 ILE A 164 -1 O ILE A 164 N ILE A 148 SHEET 1 AA3 8 LEU A 277 ALA A 283 0 SHEET 2 AA3 8 GLY A 263 ARG A 271 -1 N GLU A 268 O GLU A 281 SHEET 3 AA3 8 GLU A 199 ALA A 208 -1 N PHE A 201 O ILE A 269 SHEET 4 AA3 8 GLU A 211 TYR A 220 -1 O LEU A 213 N LEU A 206 SHEET 5 AA3 8 GLN A 232 ILE A 236 -1 O PHE A 235 N LYS A 219 SHEET 6 AA3 8 THR A 326 LEU A 332 -1 O SER A 331 N GLN A 232 SHEET 7 AA3 8 ALA A 378 LEU A 384 -1 O LEU A 384 N THR A 326 SHEET 8 AA3 8 ILE A 354 LEU A 359 -1 N LEU A 355 O TYR A 381 SHEET 1 AA4 2 GLU A 341 PHE A 342 0 SHEET 2 AA4 2 LEU A 403 HIS A 404 -1 O HIS A 404 N GLU A 341 SHEET 1 AA5 4 HIS B 48 ILE B 51 0 SHEET 2 AA5 4 ILE B 28 THR B 34 1 N VAL B 32 O TYR B 50 SHEET 3 AA5 4 VAL B 2 ILE B 7 1 N LEU B 6 O SER B 31 SHEET 4 AA5 4 HIS B 76 SER B 79 1 O VAL B 78 N LEU B 5 SHEET 1 AA6 4 LEU B 129 VAL B 131 0 SHEET 2 AA6 4 MSE B 190 LYS B 194 -1 O MSE B 190 N VAL B 131 SHEET 3 AA6 4 ILE B 148 PRO B 152 -1 N ILE B 149 O GLU B 193 SHEET 4 AA6 4 PHE B 162 ILE B 164 -1 O PHE B 162 N VAL B 150 SHEET 1 AA7 8 LEU B 277 ALA B 283 0 SHEET 2 AA7 8 GLY B 263 ARG B 271 -1 N GLU B 268 O GLU B 281 SHEET 3 AA7 8 GLU B 199 ALA B 208 -1 N PHE B 201 O ILE B 269 SHEET 4 AA7 8 GLU B 211 TYR B 220 -1 O LEU B 213 N LEU B 206 SHEET 5 AA7 8 GLN B 232 ILE B 236 -1 O PHE B 235 N LYS B 219 SHEET 6 AA7 8 THR B 326 SER B 331 -1 O VAL B 327 N ILE B 236 SHEET 7 AA7 8 ALA B 378 LEU B 384 -1 O LEU B 384 N THR B 326 SHEET 8 AA7 8 ILE B 354 LEU B 359 -1 N LEU B 355 O TYR B 381 SHEET 1 AA8 2 GLU B 341 PHE B 342 0 SHEET 2 AA8 2 LEU B 403 HIS B 404 -1 O HIS B 404 N GLU B 341 LINK C MSE A 1 N VAL A 2 1555 1555 1.33 LINK C VAL A 60 N MSE A 61 1555 1555 1.33 LINK C MSE A 61 N LYS A 62 1555 1555 1.33 LINK C LEU A 64 N MSE A 65 1555 1555 1.33 LINK C MSE A 65 N LEU A 66 1555 1555 1.33 LINK C TYR A 107 N MSE A 108 1555 1555 1.33 LINK C MSE A 108 N THR A 109 1555 1555 1.33 LINK C ALA A 113 N MSE A 114 1555 1555 1.33 LINK C MSE A 114 N LYS A 115 1555 1555 1.33 LINK C LYS A 119 N MSE A 120 1555 1555 1.33 LINK C MSE A 120 N GLU A 121 1555 1555 1.33 LINK C LEU A 189 N MSE A 190 1555 1555 1.33 LINK C MSE A 190 N ILE A 191 1555 1555 1.33 LINK C GLU A 197 N MSE A 198 1555 1555 1.33 LINK C MSE A 198 N GLU A 199 1555 1555 1.33 LINK C ALA A 283 N MSE A 284 1555 1555 1.33 LINK C MSE A 284 N ARG A 285 1555 1555 1.33 LINK C ARG A 293 N MSE A 294 1555 1555 1.33 LINK C MSE A 294 N ILE A 295 1555 1555 1.33 LINK C MSE B 1 N VAL B 2 1555 1555 1.33 LINK C VAL B 60 N MSE B 61 1555 1555 1.33 LINK C MSE B 61 N LYS B 62 1555 1555 1.33 LINK C LEU B 64 N MSE B 65 1555 1555 1.33 LINK C MSE B 65 N LEU B 66 1555 1555 1.33 LINK C TYR B 107 N MSE B 108 1555 1555 1.33 LINK C MSE B 108 N THR B 109 1555 1555 1.33 LINK C ALA B 113 N MSE B 114 1555 1555 1.33 LINK C MSE B 114 N LYS B 115 1555 1555 1.33 LINK C LYS B 119 N MSE B 120 1555 1555 1.33 LINK C MSE B 120 N GLU B 121 1555 1555 1.33 LINK C LEU B 189 N MSE B 190 1555 1555 1.33 LINK C MSE B 190 N ILE B 191 1555 1555 1.33 LINK C GLU B 197 N MSE B 198 1555 1555 1.33 LINK C MSE B 198 N GLU B 199 1555 1555 1.33 LINK C ALA B 283 N MSE B 284 1555 1555 1.33 LINK C MSE B 284 N ARG B 285 1555 1555 1.33 LINK C ARG B 293 N MSE B 294 1555 1555 1.33 LINK C MSE B 294 N ILE B 295 1555 1555 1.33 CISPEP 1 TRP A 146 PRO A 147 0 0.92 CISPEP 2 SER A 177 GLY A 178 0 -6.11 CISPEP 3 TRP B 146 PRO B 147 0 -0.29 CRYST1 58.380 87.290 85.260 90.00 97.52 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017129 0.000000 0.002261 0.00000 SCALE2 0.000000 0.011456 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011831 0.00000 HETATM 1 N MSE A 1 70.300 34.156 23.057 1.00 64.56 N HETATM 2 CA MSE A 1 70.100 34.965 24.253 1.00 70.09 C HETATM 3 C MSE A 1 68.664 34.853 24.755 1.00 63.07 C HETATM 4 O MSE A 1 67.722 34.819 23.964 1.00 59.62 O HETATM 5 CB MSE A 1 70.452 36.430 23.977 1.00 67.70 C HETATM 6 CG MSE A 1 70.359 37.332 25.199 1.00 68.72 C HETATM 7 SE MSE A 1 71.027 39.137 24.886 1.00167.58 SE HETATM 8 CE MSE A 1 69.800 39.675 23.471 1.00 58.29 C