HEADER VIRAL PROTEIN 09-SEP-14 4WE8 TITLE THE CRYSTAL STRUCTURE OF HEMAGGLUTININ OF INFLUENZA VIRUS TITLE 2 A/VICTORIA/361/2011 COMPND MOL_ID: 1; COMPND 2 MOLECULE: HEMAGGLUTININ; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 17-519; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: INFLUENZA A VIRUS; SOURCE 3 ORGANISM_TAXID: 1331560; SOURCE 4 STRAIN: A/SINGAPORE/H2011.447/2011(H3N2); SOURCE 5 GENE: HA; SOURCE 6 EXPRESSION_SYSTEM: TRICHOPLUSIA NI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 7111 KEYWDS HEMAGGLUTININ, H3N2, INFLUENZA VIRUS, VIRAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR H.YANG,P.J.CARNEY,J.C.CHANG,Z.GUO,J.M.VILLANUEVA,J.STEVENS REVDAT 5 06-NOV-24 4WE8 1 REMARK REVDAT 4 27-DEC-23 4WE8 1 HETSYN REVDAT 3 29-JUL-20 4WE8 1 COMPND REMARK HETNAM LINK REVDAT 3 2 1 SITE ATOM REVDAT 2 27-SEP-17 4WE8 1 COMPND SOURCE KEYWDS JRNL REVDAT 2 2 1 REMARK LINK SITE ATOM REVDAT 1 11-FEB-15 4WE8 0 JRNL AUTH H.YANG,P.J.CARNEY,J.C.CHANG,Z.GUO,J.M.VILLANUEVA,J.STEVENS JRNL TITL STRUCTURE AND RECEPTOR BINDING PREFERENCES OF RECOMBINANT JRNL TITL 2 HUMAN A(H3N2) VIRUS HEMAGGLUTININS. JRNL REF VIROLOGY V.477C 18 2015 JRNL REFN ISSN 0042-6822 JRNL PMID 25617824 JRNL DOI 10.1016/J.VIROL.2014.12.024 REMARK 2 REMARK 2 RESOLUTION. 2.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.8_1069) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 34.16 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.330 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.4 REMARK 3 NUMBER OF REFLECTIONS : 43789 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.192 REMARK 3 R VALUE (WORKING SET) : 0.190 REMARK 3 FREE R VALUE : 0.227 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.070 REMARK 3 FREE R VALUE TEST SET COUNT : 2218 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 34.1607 - 5.2847 0.96 2706 150 0.1957 0.2360 REMARK 3 2 5.2847 - 4.1971 0.99 2679 141 0.1584 0.2031 REMARK 3 3 4.1971 - 3.6672 0.99 2639 149 0.1707 0.1894 REMARK 3 4 3.6672 - 3.3323 1.00 2646 128 0.1843 0.2263 REMARK 3 5 3.3323 - 3.0936 0.99 2640 140 0.1970 0.2113 REMARK 3 6 3.0936 - 2.9113 0.99 2624 132 0.1990 0.2370 REMARK 3 7 2.9113 - 2.7656 0.99 2611 140 0.2031 0.2491 REMARK 3 8 2.7656 - 2.6452 0.99 2588 142 0.2085 0.2575 REMARK 3 9 2.6452 - 2.5434 0.99 2612 118 0.2006 0.2290 REMARK 3 10 2.5434 - 2.4557 0.99 2606 140 0.2076 0.2488 REMARK 3 11 2.4557 - 2.3789 0.99 2600 133 0.2080 0.2507 REMARK 3 12 2.3789 - 2.3109 0.99 2560 144 0.2123 0.2789 REMARK 3 13 2.3109 - 2.2501 0.98 2554 144 0.2067 0.2569 REMARK 3 14 2.2501 - 2.1952 0.98 2506 141 0.2143 0.2183 REMARK 3 15 2.1952 - 2.1453 0.97 2541 141 0.2273 0.2660 REMARK 3 16 2.1453 - 2.0997 0.95 2459 135 0.2347 0.2980 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.210 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 22.290 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.005 4102 REMARK 3 ANGLE : 0.931 5552 REMARK 3 CHIRALITY : 0.063 617 REMARK 3 PLANARITY : 0.003 717 REMARK 3 DIHEDRAL : 16.177 1542 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4WE8 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 10-SEP-14. REMARK 100 THE DEPOSITION ID IS D_1000203630. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 16-MAR-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 10.5 REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 22-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MAR SCANNER 345 MM PLATE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 43789 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.100 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.5 REMARK 200 DATA REDUNDANCY : 5.100 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 37.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 62.12 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.25 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M CAPS:NAOH, 30% PEG 400, PH 10.5, REMARK 280 MICROBATCH, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: H 3 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z REMARK 290 6555 -X,-X+Y,-Z REMARK 290 7555 X+2/3,Y+1/3,Z+1/3 REMARK 290 8555 -Y+2/3,X-Y+1/3,Z+1/3 REMARK 290 9555 -X+Y+2/3,-X+1/3,Z+1/3 REMARK 290 10555 Y+2/3,X+1/3,-Z+1/3 REMARK 290 11555 X-Y+2/3,-Y+1/3,-Z+1/3 REMARK 290 12555 -X+2/3,-X+Y+1/3,-Z+1/3 REMARK 290 13555 X+1/3,Y+2/3,Z+2/3 REMARK 290 14555 -Y+1/3,X-Y+2/3,Z+2/3 REMARK 290 15555 -X+Y+1/3,-X+2/3,Z+2/3 REMARK 290 16555 Y+1/3,X+2/3,-Z+2/3 REMARK 290 17555 X-Y+1/3,-Y+2/3,-Z+2/3 REMARK 290 18555 -X+1/3,-X+Y+2/3,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 7 1.000000 0.000000 0.000000 50.45550 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 29.13050 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 127.78700 REMARK 290 SMTRY1 8 -0.500000 -0.866025 0.000000 50.45550 REMARK 290 SMTRY2 8 0.866025 -0.500000 0.000000 29.13050 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 127.78700 REMARK 290 SMTRY1 9 -0.500000 0.866025 0.000000 50.45550 REMARK 290 SMTRY2 9 -0.866025 -0.500000 0.000000 29.13050 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 127.78700 REMARK 290 SMTRY1 10 -0.500000 0.866025 0.000000 50.45550 REMARK 290 SMTRY2 10 0.866025 0.500000 0.000000 29.13050 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 127.78700 REMARK 290 SMTRY1 11 1.000000 0.000000 0.000000 50.45550 REMARK 290 SMTRY2 11 0.000000 -1.000000 0.000000 29.13050 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 127.78700 REMARK 290 SMTRY1 12 -0.500000 -0.866025 0.000000 50.45550 REMARK 290 SMTRY2 12 -0.866025 0.500000 0.000000 29.13050 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 127.78700 REMARK 290 SMTRY1 13 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 58.26099 REMARK 290 SMTRY3 13 0.000000 0.000000 1.000000 255.57400 REMARK 290 SMTRY1 14 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 14 0.866025 -0.500000 0.000000 58.26099 REMARK 290 SMTRY3 14 0.000000 0.000000 1.000000 255.57400 REMARK 290 SMTRY1 15 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 15 -0.866025 -0.500000 0.000000 58.26099 REMARK 290 SMTRY3 15 0.000000 0.000000 1.000000 255.57400 REMARK 290 SMTRY1 16 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 16 0.866025 0.500000 0.000000 58.26099 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 255.57400 REMARK 290 SMTRY1 17 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 17 0.000000 -1.000000 0.000000 58.26099 REMARK 290 SMTRY3 17 0.000000 0.000000 -1.000000 255.57400 REMARK 290 SMTRY1 18 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 18 -0.866025 0.500000 0.000000 58.26099 REMARK 290 SMTRY3 18 0.000000 0.000000 -1.000000 255.57400 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 20740 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 60710 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 59.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 -50.45550 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 -87.39149 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 50.45550 REMARK 350 BIOMT2 3 -0.866025 -0.500000 0.000000 -87.39149 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 778 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA A -4 REMARK 465 ASP A -3 REMARK 465 LEU A -2 REMARK 465 GLY A -1 REMARK 465 SER A 0 REMARK 465 GLN A 1 REMARK 465 LYS A 2 REMARK 465 LEU A 3 REMARK 465 PRO A 4 REMARK 465 GLY A 5 REMARK 465 ASN A 6 REMARK 465 ASP A 7 REMARK 465 LYS A 326 REMARK 465 GLN A 327 REMARK 465 THR A 328 REMARK 465 ARG A 329 REMARK 465 LYS A 503 REMARK 465 SER A 504 REMARK 465 GLY A 505 REMARK 465 ARG A 506 REMARK 465 LEU A 507 REMARK 465 VAL A 508 REMARK 465 PRO A 509 REMARK 465 ARG A 510 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 950 O HOH A 962 1.86 REMARK 500 O HOH A 947 O HOH A 973 1.87 REMARK 500 NE2 HIS A 156 O HOH A 913 2.03 REMARK 500 ND2 ASN A 483 C2 NAG A 609 2.06 REMARK 500 OD1 ASN A 389 O HOH A 887 2.06 REMARK 500 NZ LYS A 452 O HOH A 701 2.08 REMARK 500 OD2 ASP A 60 O HOH A 928 2.09 REMARK 500 ND2 ASN A 165 C2 NAG B 1 2.13 REMARK 500 OE1 GLU A 62 O HOH A 702 2.15 REMARK 500 OE2 GLU A 398 O HOH A 886 2.16 REMARK 500 ND2 ASN A 22 C2 NAG A 601 2.16 REMARK 500 OD2 ASP A 175 O HOH A 703 2.17 REMARK 500 O5 NAG B 1 O HOH A 969 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 22 75.85 -105.82 REMARK 500 GLU A 62 -112.50 53.30 REMARK 500 CYS A 97 -149.97 -115.42 REMARK 500 TRP A 127 49.90 -96.53 REMARK 500 ARG A 141 -111.41 -88.77 REMARK 500 SER A 146 -154.80 -148.75 REMARK 500 ASN A 165 72.63 -151.57 REMARK 500 ALA A 196 -51.10 63.63 REMARK 500 SER A 199 -74.07 -111.21 REMARK 500 ARG A 224 52.00 35.46 REMARK 500 PHE A 392 -109.47 -121.02 REMARK 500 GLN A 394 -136.41 -124.84 REMARK 500 ARG A 456 -122.98 50.97 REMARK 500 TYR A 470 34.91 -87.26 REMARK 500 ASP A 474 -177.07 -67.51 REMARK 500 GLN A 501 -151.97 -149.37 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 965 DISTANCE = 6.56 ANGSTROMS REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4WE4 RELATED DB: PDB REMARK 900 RELATED ID: 4WE5 RELATED DB: PDB REMARK 900 RELATED ID: 4WE6 RELATED DB: PDB REMARK 900 RELATED ID: 4WE7 RELATED DB: PDB REMARK 900 RELATED ID: 4WE9 RELATED DB: PDB REMARK 900 RELATED ID: 4WEA RELATED DB: PDB DBREF 4WE8 A 1 503 UNP R9U684 R9U684_9INFA 17 519 SEQADV 4WE8 ALA A -4 UNP R9U684 EXPRESSION TAG SEQADV 4WE8 ASP A -3 UNP R9U684 EXPRESSION TAG SEQADV 4WE8 LEU A -2 UNP R9U684 EXPRESSION TAG SEQADV 4WE8 GLY A -1 UNP R9U684 EXPRESSION TAG SEQADV 4WE8 SER A 0 UNP R9U684 EXPRESSION TAG SEQADV 4WE8 SER A 504 UNP R9U684 EXPRESSION TAG SEQADV 4WE8 GLY A 505 UNP R9U684 EXPRESSION TAG SEQADV 4WE8 ARG A 506 UNP R9U684 EXPRESSION TAG SEQADV 4WE8 LEU A 507 UNP R9U684 EXPRESSION TAG SEQADV 4WE8 VAL A 508 UNP R9U684 EXPRESSION TAG SEQADV 4WE8 PRO A 509 UNP R9U684 EXPRESSION TAG SEQADV 4WE8 ARG A 510 UNP R9U684 EXPRESSION TAG SEQRES 1 A 515 ALA ASP LEU GLY SER GLN LYS LEU PRO GLY ASN ASP ASN SEQRES 2 A 515 SER THR ALA THR LEU CYS LEU GLY HIS HIS ALA VAL PRO SEQRES 3 A 515 ASN GLY THR ILE VAL LYS THR ILE THR ASN ASP GLN ILE SEQRES 4 A 515 GLU VAL THR ASN ALA THR GLU LEU VAL GLN ASN SER SER SEQRES 5 A 515 ILE GLY GLU ILE CYS ASP SER PRO HIS GLN ILE LEU ASP SEQRES 6 A 515 GLY GLU ASN CYS THR LEU ILE ASP ALA LEU LEU GLY ASP SEQRES 7 A 515 PRO GLN CYS ASP GLY PHE GLN ASN LYS LYS TRP ASP LEU SEQRES 8 A 515 PHE VAL GLU ARG SER LYS ALA TYR SER ASN CYS TYR PRO SEQRES 9 A 515 TYR ASP VAL PRO ASP TYR ALA SER LEU ARG SER LEU VAL SEQRES 10 A 515 ALA SER SER GLY THR LEU GLU PHE ASN ASN GLU SER PHE SEQRES 11 A 515 ASN TRP THR GLY VAL THR GLN ASN GLY THR SER SER ALA SEQRES 12 A 515 CYS ILE ARG ARG SER ASN ASN SER PHE PHE SER ARG LEU SEQRES 13 A 515 ASN TRP LEU THR HIS LEU ASN PHE LYS TYR PRO ALA LEU SEQRES 14 A 515 ASN VAL THR MET PRO ASN ASN GLU GLN PHE ASP LYS LEU SEQRES 15 A 515 TYR ILE TRP GLY VAL HIS HIS PRO GLY THR ASP LYS ASP SEQRES 16 A 515 GLN ILE PHE LEU TYR ALA GLN SER SER GLY ARG ILE THR SEQRES 17 A 515 VAL SER THR LYS ARG SER GLN GLN ALA VAL ILE PRO ASN SEQRES 18 A 515 ILE GLY SER ARG PRO ARG ILE ARG ASN ILE PRO SER ARG SEQRES 19 A 515 ILE SER ILE TYR TRP THR ILE VAL LYS PRO GLY ASP ILE SEQRES 20 A 515 LEU LEU ILE ASN SER THR GLY ASN LEU ILE ALA PRO ARG SEQRES 21 A 515 GLY TYR PHE LYS ILE ARG SER GLY LYS SER SER ILE MET SEQRES 22 A 515 ARG SER ASP ALA PRO ILE GLY LYS CYS ASN SER GLU CYS SEQRES 23 A 515 ILE THR PRO ASN GLY SER ILE PRO ASN ASP LYS PRO PHE SEQRES 24 A 515 GLN ASN VAL ASN ARG ILE THR TYR GLY ALA CYS PRO ARG SEQRES 25 A 515 TYR VAL LYS GLN SER THR LEU LYS LEU ALA THR GLY MET SEQRES 26 A 515 ARG ASN VAL PRO GLU LYS GLN THR ARG GLY ILE PHE GLY SEQRES 27 A 515 ALA ILE ALA GLY PHE ILE GLU ASN GLY TRP GLU GLY MET SEQRES 28 A 515 VAL ASP GLY TRP TYR GLY PHE ARG HIS GLN ASN SER GLU SEQRES 29 A 515 GLY ARG GLY GLN ALA ALA ASP LEU LYS SER THR GLN ALA SEQRES 30 A 515 ALA ILE ASP GLN ILE ASN GLY LYS LEU ASN ARG LEU ILE SEQRES 31 A 515 GLY LYS THR ASN GLU LYS PHE HIS GLN ILE GLU LYS GLU SEQRES 32 A 515 PHE SER GLU VAL GLU GLY ARG ILE GLN ASP LEU GLU LYS SEQRES 33 A 515 TYR VAL GLU ASP THR LYS ILE ASP LEU TRP SER TYR ASN SEQRES 34 A 515 ALA GLU LEU LEU VAL ALA LEU GLU ASN GLN HIS THR ILE SEQRES 35 A 515 ASP LEU THR ASP SER GLU MET ASN LYS LEU PHE GLU LYS SEQRES 36 A 515 THR LYS LYS GLN LEU ARG GLU ASN ALA GLU ASP MET GLY SEQRES 37 A 515 ASN GLY CYS PHE LYS ILE TYR HIS LYS CYS ASP ASN ALA SEQRES 38 A 515 CYS ILE GLY SER ILE ARG ASN GLY THR TYR ASP HIS ASP SEQRES 39 A 515 VAL TYR ARG ASP GLU ALA LEU ASN ASN ARG PHE GLN ILE SEQRES 40 A 515 LYS SER GLY ARG LEU VAL PRO ARG HET NAG B 1 14 HET NAG B 2 14 HET NAG A 601 14 HET NAG A 602 14 HET NAG A 603 14 HET NAG A 604 14 HET NAG A 607 14 HET NAG A 608 14 HET NAG A 609 14 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE FORMUL 2 NAG 9(C8 H15 N O6) FORMUL 10 HOH *273(H2 O) HELIX 1 AA1 THR A 65 GLY A 72 1 8 HELIX 2 AA2 ASP A 73 GLN A 80 5 8 HELIX 3 AA3 ASP A 104 GLY A 116 1 13 HELIX 4 AA4 THR A 187 ALA A 196 1 10 HELIX 5 AA5 ASP A 366 ILE A 385 1 20 HELIX 6 AA6 GLY A 404 ARG A 456 1 53 HELIX 7 AA7 ASP A 474 ASN A 483 1 10 HELIX 8 AA8 ASP A 487 PHE A 500 1 14 SHEET 1 AA1 5 GLY A 360 ALA A 365 0 SHEET 2 AA1 5 TYR A 351 ASN A 357 -1 N PHE A 353 O ALA A 364 SHEET 3 AA1 5 ALA A 11 HIS A 17 -1 N CYS A 14 O ARG A 354 SHEET 4 AA1 5 CYS A 466 ILE A 469 -1 O PHE A 467 N LEU A 13 SHEET 5 AA1 5 ALA A 459 ASP A 461 -1 N GLU A 460 O LYS A 468 SHEET 1 AA2 2 THR A 24 VAL A 26 0 SHEET 2 AA2 2 ILE A 34 VAL A 36 -1 O ILE A 34 N VAL A 26 SHEET 1 AA3 2 ALA A 39 GLU A 41 0 SHEET 2 AA3 2 LYS A 315 ALA A 317 -1 O LEU A 316 N THR A 40 SHEET 1 AA4 3 VAL A 43 GLN A 44 0 SHEET 2 AA4 3 PHE A 294 GLN A 295 1 O PHE A 294 N GLN A 44 SHEET 3 AA4 3 ARG A 307 TYR A 308 1 O ARG A 307 N GLN A 295 SHEET 1 AA5 2 ILE A 51 SER A 54 0 SHEET 2 AA5 2 ILE A 274 ASN A 278 1 O GLY A 275 N ILE A 51 SHEET 1 AA6 3 ILE A 58 ASP A 60 0 SHEET 2 AA6 3 LEU A 86 GLU A 89 1 O VAL A 88 N LEU A 59 SHEET 3 AA6 3 SER A 266 ARG A 269 1 O MET A 268 N PHE A 87 SHEET 1 AA7 5 TYR A 100 ASP A 101 0 SHEET 2 AA7 5 ARG A 229 VAL A 237 1 O ILE A 232 N ASP A 101 SHEET 3 AA7 5 LYS A 176 HIS A 184 -1 N HIS A 184 O ARG A 229 SHEET 4 AA7 5 GLY A 256 LYS A 259 -1 O PHE A 258 N LEU A 177 SHEET 5 AA7 5 PHE A 120 ASN A 122 -1 N ASN A 121 O TYR A 257 SHEET 1 AA8 5 TYR A 100 ASP A 101 0 SHEET 2 AA8 5 ARG A 229 VAL A 237 1 O ILE A 232 N ASP A 101 SHEET 3 AA8 5 LYS A 176 HIS A 184 -1 N HIS A 184 O ARG A 229 SHEET 4 AA8 5 LEU A 251 PRO A 254 -1 O ILE A 252 N GLY A 181 SHEET 5 AA8 5 LEU A 151 TRP A 153 -1 N ASN A 152 O ALA A 253 SHEET 1 AA9 2 VAL A 130 THR A 131 0 SHEET 2 AA9 2 THR A 155 HIS A 156 -1 O THR A 155 N THR A 131 SHEET 1 AB1 2 SER A 136 ILE A 140 0 SHEET 2 AB1 2 ASN A 145 SER A 146 -1 O SER A 146 N SER A 136 SHEET 1 AB2 4 LEU A 164 PRO A 169 0 SHEET 2 AB2 4 ILE A 242 SER A 247 -1 O ILE A 245 N VAL A 166 SHEET 3 AB2 4 ILE A 202 SER A 205 -1 N THR A 203 O ASN A 246 SHEET 4 AB2 4 GLN A 210 VAL A 213 -1 O GLN A 211 N VAL A 204 SHEET 1 AB3 4 GLY A 286 ILE A 288 0 SHEET 2 AB3 4 CYS A 281 THR A 283 -1 N THR A 283 O GLY A 286 SHEET 3 AB3 4 TYR A 302 CYS A 305 -1 O TYR A 302 N ILE A 282 SHEET 4 AB3 4 ASN A 389 LYS A 391 -1 O LYS A 391 N GLY A 303 SSBOND 1 CYS A 14 CYS A 466 1555 1555 2.05 SSBOND 2 CYS A 52 CYS A 277 1555 1555 2.04 SSBOND 3 CYS A 64 CYS A 76 1555 1555 2.05 SSBOND 4 CYS A 97 CYS A 139 1555 1555 2.04 SSBOND 5 CYS A 281 CYS A 305 1555 1555 2.04 SSBOND 6 CYS A 473 CYS A 477 1555 1555 2.07 LINK ND2 ASN A 22 C1 NAG A 601 1555 1555 1.44 LINK ND2 ASN A 38 C1 NAG A 602 1555 1555 1.45 LINK ND2 ASN A 63 C1 NAG A 603 1555 1555 1.44 LINK ND2 ASN A 133 C1 NAG A 604 1555 1555 1.44 LINK ND2 ASN A 165 C1 NAG B 1 1555 1555 1.44 LINK ND2 ASN A 246 C1 NAG A 607 1555 1555 1.44 LINK ND2 ASN A 285 C1 NAG A 608 1555 1555 1.45 LINK ND2 ASN A 483 C1 NAG A 609 1555 1555 1.44 LINK O4 NAG B 1 C1 NAG B 2 1555 1555 1.44 CISPEP 1 SER A 54 PRO A 55 0 1.55 CRYST1 100.911 100.911 383.361 90.00 90.00 120.00 H 3 2 18 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009910 0.005721 0.000000 0.00000 SCALE2 0.000000 0.011443 0.000000 0.00000 SCALE3 0.000000 0.000000 0.002609 0.00000