HEADER VIRAL PROTEIN 09-SEP-14 4WEA TITLE STRUCTURE AND RECEPTOR BINDING PREFERENECES OF RECOMBINANT HUMAN TITLE 2 A(H3N2) VIRUS HEMAGGLUTININS CAVEAT 4WEA NAG A 607 HAS WRONG CHIRALITY AT ATOM C1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: HEMAGGLUTININ; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 17-519; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: INFLUENZA A VIRUS; SOURCE 3 ORGANISM_TAXID: 1331560; SOURCE 4 STRAIN: A/SINGAPORE/H2011.447/2011(H3N2); SOURCE 5 GENE: HA; SOURCE 6 EXPRESSION_SYSTEM: TRICHOPLUSIA NI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 7111 KEYWDS HEMAGGLUTININ, H3N2, INFLUENZA VIRUS, VIRAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR H.YANG,P.J.CARNEY,J.C.CHANG,Z.GUO,J.M.VILLANUEVA,J.STEVENS REVDAT 4 27-DEC-23 4WEA 1 HETSYN REVDAT 3 29-JUL-20 4WEA 1 CAVEAT COMPND REMARK HETNAM REVDAT 3 2 1 LINK SITE ATOM REVDAT 2 27-SEP-17 4WEA 1 COMPND SOURCE KEYWDS JRNL REVDAT 2 2 1 REMARK LINK SITE ATOM REVDAT 1 11-FEB-15 4WEA 0 JRNL AUTH H.YANG,P.J.CARNEY,J.C.CHANG,Z.GUO,J.M.VILLANUEVA,J.STEVENS JRNL TITL STRUCTURE AND RECEPTOR BINDING PREFERENCES OF RECOMBINANT JRNL TITL 2 HUMAN A(H3N2) VIRUS HEMAGGLUTININS. JRNL REF VIROLOGY V.477C 18 2015 JRNL REFN ISSN 0042-6822 JRNL PMID 25617824 JRNL DOI 10.1016/J.VIROL.2014.12.024 REMARK 2 REMARK 2 RESOLUTION. 2.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.8.2_1309) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 35.04 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 38413 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.191 REMARK 3 R VALUE (WORKING SET) : 0.190 REMARK 3 FREE R VALUE : 0.223 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1922 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 35.0438 - 5.2967 0.99 2783 140 0.2013 0.2264 REMARK 3 2 5.2967 - 4.2064 1.00 2676 132 0.1578 0.1827 REMARK 3 3 4.2064 - 3.6753 1.00 2638 144 0.1680 0.2129 REMARK 3 4 3.6753 - 3.3396 1.00 2613 149 0.1875 0.2038 REMARK 3 5 3.3396 - 3.1004 1.00 2630 119 0.2013 0.2218 REMARK 3 6 3.1004 - 2.9177 1.00 2581 153 0.2012 0.2450 REMARK 3 7 2.9177 - 2.7716 1.00 2594 141 0.2012 0.2322 REMARK 3 8 2.7716 - 2.6510 1.00 2566 144 0.2025 0.2519 REMARK 3 9 2.6510 - 2.5490 1.00 2613 129 0.1988 0.2574 REMARK 3 10 2.5490 - 2.4611 1.00 2570 151 0.2076 0.2614 REMARK 3 11 2.4611 - 2.3841 1.00 2574 130 0.1991 0.2182 REMARK 3 12 2.3841 - 2.3160 1.00 2630 114 0.2069 0.2488 REMARK 3 13 2.3160 - 2.2550 0.99 2545 136 0.2148 0.2515 REMARK 3 14 2.2550 - 2.2000 0.96 2478 140 0.2303 0.3081 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.210 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 23.760 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 4122 REMARK 3 ANGLE : 1.021 5580 REMARK 3 CHIRALITY : 0.073 623 REMARK 3 PLANARITY : 0.004 719 REMARK 3 DIHEDRAL : 15.937 1517 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 10 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 8 THROUGH 57 ) REMARK 3 ORIGIN FOR THE GROUP (A): -2.6587 38.5248 -32.9904 REMARK 3 T TENSOR REMARK 3 T11: 0.3796 T22: 0.1757 REMARK 3 T33: 0.4174 T12: -0.0265 REMARK 3 T13: -0.1128 T23: -0.0071 REMARK 3 L TENSOR REMARK 3 L11: 0.7074 L22: 0.4634 REMARK 3 L33: 0.5464 L12: 0.1497 REMARK 3 L13: -0.3597 L23: 0.1986 REMARK 3 S TENSOR REMARK 3 S11: 0.1204 S12: -0.1512 S13: -0.0901 REMARK 3 S21: 0.0690 S22: 0.1376 S23: 0.0653 REMARK 3 S31: 0.5445 S32: -0.4010 S33: 0.0048 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 58 THROUGH 153 ) REMARK 3 ORIGIN FOR THE GROUP (A): 9.9476 35.1020 17.8263 REMARK 3 T TENSOR REMARK 3 T11: 0.9705 T22: 0.9582 REMARK 3 T33: 0.5189 T12: 0.0394 REMARK 3 T13: -0.2543 T23: 0.2376 REMARK 3 L TENSOR REMARK 3 L11: 0.3328 L22: 0.4297 REMARK 3 L33: 0.6282 L12: -0.5354 REMARK 3 L13: -0.2033 L23: 0.2002 REMARK 3 S TENSOR REMARK 3 S11: -0.0373 S12: -0.7355 S13: -0.3399 REMARK 3 S21: 0.5693 S22: 0.1443 S23: -0.1760 REMARK 3 S31: 0.4737 S32: 0.5079 S33: 0.0015 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 154 THROUGH 184 ) REMARK 3 ORIGIN FOR THE GROUP (A): 17.2105 45.3852 29.1233 REMARK 3 T TENSOR REMARK 3 T11: 1.0512 T22: 1.4577 REMARK 3 T33: 0.4813 T12: 0.0673 REMARK 3 T13: -0.2982 T23: 0.0944 REMARK 3 L TENSOR REMARK 3 L11: 0.0595 L22: 0.9135 REMARK 3 L33: 0.0854 L12: -0.2226 REMARK 3 L13: -0.0267 L23: 0.0970 REMARK 3 S TENSOR REMARK 3 S11: -0.0592 S12: -0.9351 S13: 0.0219 REMARK 3 S21: 0.2827 S22: 0.2518 S23: -0.3228 REMARK 3 S31: 0.0018 S32: 0.0298 S33: 0.2756 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 185 THROUGH 213 ) REMARK 3 ORIGIN FOR THE GROUP (A): 7.3720 48.4413 33.8132 REMARK 3 T TENSOR REMARK 3 T11: 1.4141 T22: 1.4627 REMARK 3 T33: 0.5565 T12: 0.0758 REMARK 3 T13: -0.0333 T23: -0.0232 REMARK 3 L TENSOR REMARK 3 L11: 0.2510 L22: 0.0523 REMARK 3 L33: 0.0271 L12: 0.0549 REMARK 3 L13: 0.0687 L23: 0.0444 REMARK 3 S TENSOR REMARK 3 S11: -0.5267 S12: -0.3768 S13: 0.4044 REMARK 3 S21: 0.9524 S22: 0.3000 S23: -0.0288 REMARK 3 S31: -0.2143 S32: -0.3694 S33: -0.0006 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 214 THROUGH 247 ) REMARK 3 ORIGIN FOR THE GROUP (A): 6.0361 45.3791 25.9922 REMARK 3 T TENSOR REMARK 3 T11: 1.1568 T22: 1.1916 REMARK 3 T33: 0.5389 T12: -0.0277 REMARK 3 T13: -0.1477 T23: 0.0708 REMARK 3 L TENSOR REMARK 3 L11: 0.6928 L22: 0.3229 REMARK 3 L33: 0.1364 L12: -0.3554 REMARK 3 L13: 0.0237 L23: -0.0401 REMARK 3 S TENSOR REMARK 3 S11: -0.1814 S12: -1.1002 S13: 0.4073 REMARK 3 S21: 0.6258 S22: 0.2418 S23: 0.1117 REMARK 3 S31: 0.5467 S32: 0.2175 S33: -0.0050 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 248 THROUGH 275 ) REMARK 3 ORIGIN FOR THE GROUP (A): 11.5638 39.7620 11.8669 REMARK 3 T TENSOR REMARK 3 T11: 0.7078 T22: 0.6812 REMARK 3 T33: 0.4352 T12: 0.0140 REMARK 3 T13: -0.2074 T23: 0.1137 REMARK 3 L TENSOR REMARK 3 L11: 0.5070 L22: 0.2841 REMARK 3 L33: 1.3441 L12: -0.2734 REMARK 3 L13: -0.4826 L23: 0.0448 REMARK 3 S TENSOR REMARK 3 S11: 0.0494 S12: -0.4206 S13: -0.1169 REMARK 3 S21: 0.3915 S22: 0.2203 S23: -0.0690 REMARK 3 S31: 0.1667 S32: 0.4872 S33: 0.3156 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 276 THROUGH 366 ) REMARK 3 ORIGIN FOR THE GROUP (A): -0.7667 39.3676 -33.7484 REMARK 3 T TENSOR REMARK 3 T11: 0.3812 T22: 0.2189 REMARK 3 T33: 0.4126 T12: -0.0243 REMARK 3 T13: -0.0758 T23: 0.0172 REMARK 3 L TENSOR REMARK 3 L11: 0.4115 L22: 0.3849 REMARK 3 L33: 0.9251 L12: -0.1965 REMARK 3 L13: -0.1278 L23: 0.3809 REMARK 3 S TENSOR REMARK 3 S11: 0.0543 S12: -0.0927 S13: -0.1838 REMARK 3 S21: 0.0258 S22: 0.0732 S23: -0.0339 REMARK 3 S31: 0.5159 S32: -0.1794 S33: 0.0002 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 367 THROUGH 404 ) REMARK 3 ORIGIN FOR THE GROUP (A): 5.0869 44.9001 -19.3165 REMARK 3 T TENSOR REMARK 3 T11: 0.4994 T22: 0.3619 REMARK 3 T33: 0.4512 T12: -0.0233 REMARK 3 T13: -0.0882 T23: 0.0186 REMARK 3 L TENSOR REMARK 3 L11: 0.2455 L22: 0.6857 REMARK 3 L33: 1.0469 L12: -0.2326 REMARK 3 L13: 0.5553 L23: 0.2377 REMARK 3 S TENSOR REMARK 3 S11: 0.1301 S12: -0.2091 S13: -0.1724 REMARK 3 S21: 0.3148 S22: 0.1312 S23: -0.1170 REMARK 3 S31: 0.3218 S32: 0.6176 S33: 0.3139 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 405 THROUGH 455 ) REMARK 3 ORIGIN FOR THE GROUP (A): -1.3292 51.7416 -28.8422 REMARK 3 T TENSOR REMARK 3 T11: 0.2668 T22: 0.2602 REMARK 3 T33: 0.3714 T12: -0.0064 REMARK 3 T13: -0.0177 T23: 0.0021 REMARK 3 L TENSOR REMARK 3 L11: -0.0114 L22: 0.3885 REMARK 3 L33: 0.2562 L12: 0.0209 REMARK 3 L13: 0.2694 L23: 0.3490 REMARK 3 S TENSOR REMARK 3 S11: 0.0865 S12: -0.0422 S13: -0.1144 REMARK 3 S21: 0.0118 S22: 0.0558 S23: 0.0088 REMARK 3 S31: -0.0822 S32: -0.0529 S33: -0.0000 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 456 THROUGH 502 ) REMARK 3 ORIGIN FOR THE GROUP (A): 3.8002 45.9583 -70.2222 REMARK 3 T TENSOR REMARK 3 T11: 0.4314 T22: 0.3879 REMARK 3 T33: 0.4168 T12: 0.0375 REMARK 3 T13: 0.0056 T23: -0.0828 REMARK 3 L TENSOR REMARK 3 L11: 0.0325 L22: 0.4763 REMARK 3 L33: 0.3453 L12: -0.1817 REMARK 3 L13: 0.0999 L23: -0.0579 REMARK 3 S TENSOR REMARK 3 S11: 0.0690 S12: 0.2628 S13: 0.0337 REMARK 3 S21: -0.3521 S22: -0.0672 S23: 0.0121 REMARK 3 S31: 0.0083 S32: -0.1025 S33: -0.0014 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4WEA COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 10-SEP-14. REMARK 100 THE DEPOSITION ID IS D_1000203632. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 20-APR-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 10.5 REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 22-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MAR SCANNER 345 MM PLATE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 38431 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.200 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : 6.900 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 7.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 61.91 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.23 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M CAPS:NAOH, 30% PEG 400, PH 10.5, REMARK 280 MICROBATCH, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: H 3 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z REMARK 290 6555 -X,-X+Y,-Z REMARK 290 7555 X+2/3,Y+1/3,Z+1/3 REMARK 290 8555 -Y+2/3,X-Y+1/3,Z+1/3 REMARK 290 9555 -X+Y+2/3,-X+1/3,Z+1/3 REMARK 290 10555 Y+2/3,X+1/3,-Z+1/3 REMARK 290 11555 X-Y+2/3,-Y+1/3,-Z+1/3 REMARK 290 12555 -X+2/3,-X+Y+1/3,-Z+1/3 REMARK 290 13555 X+1/3,Y+2/3,Z+2/3 REMARK 290 14555 -Y+1/3,X-Y+2/3,Z+2/3 REMARK 290 15555 -X+Y+1/3,-X+2/3,Z+2/3 REMARK 290 16555 Y+1/3,X+2/3,-Z+2/3 REMARK 290 17555 X-Y+1/3,-Y+2/3,-Z+2/3 REMARK 290 18555 -X+1/3,-X+Y+2/3,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 7 1.000000 0.000000 0.000000 50.36650 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 29.07911 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 127.53767 REMARK 290 SMTRY1 8 -0.500000 -0.866025 0.000000 50.36650 REMARK 290 SMTRY2 8 0.866025 -0.500000 0.000000 29.07911 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 127.53767 REMARK 290 SMTRY1 9 -0.500000 0.866025 0.000000 50.36650 REMARK 290 SMTRY2 9 -0.866025 -0.500000 0.000000 29.07911 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 127.53767 REMARK 290 SMTRY1 10 -0.500000 0.866025 0.000000 50.36650 REMARK 290 SMTRY2 10 0.866025 0.500000 0.000000 29.07911 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 127.53767 REMARK 290 SMTRY1 11 1.000000 0.000000 0.000000 50.36650 REMARK 290 SMTRY2 11 0.000000 -1.000000 0.000000 29.07911 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 127.53767 REMARK 290 SMTRY1 12 -0.500000 -0.866025 0.000000 50.36650 REMARK 290 SMTRY2 12 -0.866025 0.500000 0.000000 29.07911 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 127.53767 REMARK 290 SMTRY1 13 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 58.15822 REMARK 290 SMTRY3 13 0.000000 0.000000 1.000000 255.07533 REMARK 290 SMTRY1 14 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 14 0.866025 -0.500000 0.000000 58.15822 REMARK 290 SMTRY3 14 0.000000 0.000000 1.000000 255.07533 REMARK 290 SMTRY1 15 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 15 -0.866025 -0.500000 0.000000 58.15822 REMARK 290 SMTRY3 15 0.000000 0.000000 1.000000 255.07533 REMARK 290 SMTRY1 16 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 16 0.866025 0.500000 0.000000 58.15822 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 255.07533 REMARK 290 SMTRY1 17 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 17 0.000000 -1.000000 0.000000 58.15822 REMARK 290 SMTRY3 17 0.000000 0.000000 -1.000000 255.07533 REMARK 290 SMTRY1 18 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 18 -0.866025 0.500000 0.000000 58.15822 REMARK 290 SMTRY3 18 0.000000 0.000000 -1.000000 255.07533 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 22660 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 59860 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 55.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 50.36650 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 87.23734 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 -50.36650 REMARK 350 BIOMT2 3 -0.866025 -0.500000 0.000000 87.23734 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA A -4 REMARK 465 ASP A -3 REMARK 465 LEU A -2 REMARK 465 GLY A -1 REMARK 465 SER A 0 REMARK 465 GLN A 1 REMARK 465 LYS A 2 REMARK 465 LEU A 3 REMARK 465 PRO A 4 REMARK 465 GLY A 5 REMARK 465 ASN A 6 REMARK 465 ASP A 7 REMARK 465 LYS A 326 REMARK 465 GLN A 327 REMARK 465 THR A 328 REMARK 465 ARG A 329 REMARK 465 LYS A 503 REMARK 465 SER A 504 REMARK 465 GLY A 505 REMARK 465 ARG A 506 REMARK 465 LEU A 507 REMARK 465 VAL A 508 REMARK 465 PRO A 509 REMARK 465 ARG A 510 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 N GLY A 23 O HOH A 847 2.04 REMARK 500 O HOH A 845 O HOH A 849 2.07 REMARK 500 OD2 ASP A 104 O HOH A 701 2.09 REMARK 500 OD2 ASP A 348 O HOH A 702 2.12 REMARK 500 OG SER A 137 O HOH A 855 2.12 REMARK 500 OE1 GLN A 394 O HOH A 703 2.15 REMARK 500 O ASN A 45 O HOH A 803 2.15 REMARK 500 OD1 ASP A 68 OH TYR A 100 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 22 73.86 -109.37 REMARK 500 GLU A 62 -112.68 55.93 REMARK 500 PRO A 74 -36.78 -36.63 REMARK 500 CYS A 97 -152.41 -150.79 REMARK 500 ARG A 141 -124.89 -90.16 REMARK 500 ARG A 142 63.17 -61.97 REMARK 500 SER A 143 -6.23 65.33 REMARK 500 TYR A 161 89.12 -155.38 REMARK 500 ASN A 165 63.45 -158.53 REMARK 500 ALA A 196 -73.66 60.65 REMARK 500 SER A 199 -117.49 -83.06 REMARK 500 ARG A 224 48.78 35.30 REMARK 500 SER A 266 -168.24 -161.30 REMARK 500 ALA A 334 -68.95 -90.52 REMARK 500 PHE A 392 -110.69 -118.56 REMARK 500 GLN A 394 -138.47 -123.05 REMARK 500 ARG A 456 -120.23 52.27 REMARK 500 TYR A 470 34.18 -89.29 REMARK 500 PHE A 500 58.22 -105.92 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 SIA A 610 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4WE4 RELATED DB: PDB REMARK 900 RELATED ID: 4WE5 RELATED DB: PDB REMARK 900 RELATED ID: 4WE6 RELATED DB: PDB REMARK 900 RELATED ID: 4WE7 RELATED DB: PDB REMARK 900 RELATED ID: 4WE8 RELATED DB: PDB REMARK 900 RELATED ID: 4WE9 RELATED DB: PDB DBREF 4WEA A 1 503 UNP R9U684 R9U684_9INFA 17 519 SEQADV 4WEA ALA A -4 UNP R9U684 EXPRESSION TAG SEQADV 4WEA ASP A -3 UNP R9U684 EXPRESSION TAG SEQADV 4WEA LEU A -2 UNP R9U684 EXPRESSION TAG SEQADV 4WEA GLY A -1 UNP R9U684 EXPRESSION TAG SEQADV 4WEA SER A 0 UNP R9U684 EXPRESSION TAG SEQADV 4WEA SER A 504 UNP R9U684 EXPRESSION TAG SEQADV 4WEA GLY A 505 UNP R9U684 EXPRESSION TAG SEQADV 4WEA ARG A 506 UNP R9U684 EXPRESSION TAG SEQADV 4WEA LEU A 507 UNP R9U684 EXPRESSION TAG SEQADV 4WEA VAL A 508 UNP R9U684 EXPRESSION TAG SEQADV 4WEA PRO A 509 UNP R9U684 EXPRESSION TAG SEQADV 4WEA ARG A 510 UNP R9U684 EXPRESSION TAG SEQRES 1 A 515 ALA ASP LEU GLY SER GLN LYS LEU PRO GLY ASN ASP ASN SEQRES 2 A 515 SER THR ALA THR LEU CYS LEU GLY HIS HIS ALA VAL PRO SEQRES 3 A 515 ASN GLY THR ILE VAL LYS THR ILE THR ASN ASP GLN ILE SEQRES 4 A 515 GLU VAL THR ASN ALA THR GLU LEU VAL GLN ASN SER SER SEQRES 5 A 515 ILE GLY GLU ILE CYS ASP SER PRO HIS GLN ILE LEU ASP SEQRES 6 A 515 GLY GLU ASN CYS THR LEU ILE ASP ALA LEU LEU GLY ASP SEQRES 7 A 515 PRO GLN CYS ASP GLY PHE GLN ASN LYS LYS TRP ASP LEU SEQRES 8 A 515 PHE VAL GLU ARG SER LYS ALA TYR SER ASN CYS TYR PRO SEQRES 9 A 515 TYR ASP VAL PRO ASP TYR ALA SER LEU ARG SER LEU VAL SEQRES 10 A 515 ALA SER SER GLY THR LEU GLU PHE ASN ASN GLU SER PHE SEQRES 11 A 515 ASN TRP THR GLY VAL THR GLN ASN GLY THR SER SER ALA SEQRES 12 A 515 CYS ILE ARG ARG SER ASN ASN SER PHE PHE SER ARG LEU SEQRES 13 A 515 ASN TRP LEU THR HIS LEU ASN PHE LYS TYR PRO ALA LEU SEQRES 14 A 515 ASN VAL THR MET PRO ASN ASN GLU GLN PHE ASP LYS LEU SEQRES 15 A 515 TYR ILE TRP GLY VAL HIS HIS PRO GLY THR ASP LYS ASP SEQRES 16 A 515 GLN ILE PHE LEU TYR ALA GLN SER SER GLY ARG ILE THR SEQRES 17 A 515 VAL SER THR LYS ARG SER GLN GLN ALA VAL ILE PRO ASN SEQRES 18 A 515 ILE GLY SER ARG PRO ARG ILE ARG ASN ILE PRO SER ARG SEQRES 19 A 515 ILE SER ILE TYR TRP THR ILE VAL LYS PRO GLY ASP ILE SEQRES 20 A 515 LEU LEU ILE ASN SER THR GLY ASN LEU ILE ALA PRO ARG SEQRES 21 A 515 GLY TYR PHE LYS ILE ARG SER GLY LYS SER SER ILE MET SEQRES 22 A 515 ARG SER ASP ALA PRO ILE GLY LYS CYS ASN SER GLU CYS SEQRES 23 A 515 ILE THR PRO ASN GLY SER ILE PRO ASN ASP LYS PRO PHE SEQRES 24 A 515 GLN ASN VAL ASN ARG ILE THR TYR GLY ALA CYS PRO ARG SEQRES 25 A 515 TYR VAL LYS GLN SER THR LEU LYS LEU ALA THR GLY MET SEQRES 26 A 515 ARG ASN VAL PRO GLU LYS GLN THR ARG GLY ILE PHE GLY SEQRES 27 A 515 ALA ILE ALA GLY PHE ILE GLU ASN GLY TRP GLU GLY MET SEQRES 28 A 515 VAL ASP GLY TRP TYR GLY PHE ARG HIS GLN ASN SER GLU SEQRES 29 A 515 GLY ARG GLY GLN ALA ALA ASP LEU LYS SER THR GLN ALA SEQRES 30 A 515 ALA ILE ASP GLN ILE ASN GLY LYS LEU ASN ARG LEU ILE SEQRES 31 A 515 GLY LYS THR ASN GLU LYS PHE HIS GLN ILE GLU LYS GLU SEQRES 32 A 515 PHE SER GLU VAL GLU GLY ARG ILE GLN ASP LEU GLU LYS SEQRES 33 A 515 TYR VAL GLU ASP THR LYS ILE ASP LEU TRP SER TYR ASN SEQRES 34 A 515 ALA GLU LEU LEU VAL ALA LEU GLU ASN GLN HIS THR ILE SEQRES 35 A 515 ASP LEU THR ASP SER GLU MET ASN LYS LEU PHE GLU LYS SEQRES 36 A 515 THR LYS LYS GLN LEU ARG GLU ASN ALA GLU ASP MET GLY SEQRES 37 A 515 ASN GLY CYS PHE LYS ILE TYR HIS LYS CYS ASP ASN ALA SEQRES 38 A 515 CYS ILE GLY SER ILE ARG ASN GLY THR TYR ASP HIS ASP SEQRES 39 A 515 VAL TYR ARG ASP GLU ALA LEU ASN ASN ARG PHE GLN ILE SEQRES 40 A 515 LYS SER GLY ARG LEU VAL PRO ARG HET NAG B 1 14 HET NAG B 2 14 HET NAG A 601 14 HET NAG A 602 14 HET NAG A 603 14 HET NAG A 604 14 HET NAG A 607 14 HET NAG A 608 14 HET NAG A 609 14 HET SIA A 610 20 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM SIA N-ACETYL-ALPHA-NEURAMINIC ACID HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN SIA N-ACETYLNEURAMINIC ACID; SIALIC ACID; ALPHA-SIALIC HETSYN 2 SIA ACID; O-SIALIC ACID FORMUL 2 NAG 9(C8 H15 N O6) FORMUL 10 SIA C11 H19 N O9 FORMUL 11 HOH *160(H2 O) HELIX 1 AA1 THR A 65 GLY A 72 1 8 HELIX 2 AA2 ASP A 73 GLN A 80 5 8 HELIX 3 AA3 ASP A 104 GLY A 116 1 13 HELIX 4 AA4 THR A 187 ALA A 196 1 10 HELIX 5 AA5 LEU A 367 ILE A 385 1 19 HELIX 6 AA6 GLY A 404 ARG A 456 1 53 HELIX 7 AA7 ASP A 474 ASN A 483 1 10 HELIX 8 AA8 ASP A 487 PHE A 500 1 14 SHEET 1 AA1 5 GLY A 360 ASP A 366 0 SHEET 2 AA1 5 TYR A 351 ASN A 357 -1 N PHE A 353 O ALA A 364 SHEET 3 AA1 5 ALA A 11 HIS A 17 -1 N CYS A 14 O ARG A 354 SHEET 4 AA1 5 CYS A 466 ILE A 469 -1 O ILE A 469 N ALA A 11 SHEET 5 AA1 5 ALA A 459 ASP A 461 -1 N GLU A 460 O LYS A 468 SHEET 1 AA2 2 THR A 24 VAL A 26 0 SHEET 2 AA2 2 ILE A 34 VAL A 36 -1 O VAL A 36 N THR A 24 SHEET 1 AA3 2 ALA A 39 GLU A 41 0 SHEET 2 AA3 2 LYS A 315 ALA A 317 -1 O LEU A 316 N THR A 40 SHEET 1 AA4 3 VAL A 43 GLN A 44 0 SHEET 2 AA4 3 PHE A 294 GLN A 295 1 O PHE A 294 N GLN A 44 SHEET 3 AA4 3 ARG A 307 TYR A 308 1 O ARG A 307 N GLN A 295 SHEET 1 AA5 2 ILE A 51 SER A 54 0 SHEET 2 AA5 2 ILE A 274 ASN A 278 1 O GLY A 275 N ILE A 51 SHEET 1 AA6 3 ILE A 58 ASP A 60 0 SHEET 2 AA6 3 LEU A 86 GLU A 89 1 O VAL A 88 N LEU A 59 SHEET 3 AA6 3 SER A 266 ARG A 269 1 O MET A 268 N PHE A 87 SHEET 1 AA7 5 TYR A 100 ASP A 101 0 SHEET 2 AA7 5 ARG A 229 VAL A 237 1 O ILE A 230 N ASP A 101 SHEET 3 AA7 5 LYS A 176 HIS A 184 -1 N HIS A 184 O ARG A 229 SHEET 4 AA7 5 GLY A 256 LYS A 259 -1 O PHE A 258 N LEU A 177 SHEET 5 AA7 5 PHE A 120 ASN A 122 -1 N ASN A 121 O TYR A 257 SHEET 1 AA8 5 TYR A 100 ASP A 101 0 SHEET 2 AA8 5 ARG A 229 VAL A 237 1 O ILE A 230 N ASP A 101 SHEET 3 AA8 5 LYS A 176 HIS A 184 -1 N HIS A 184 O ARG A 229 SHEET 4 AA8 5 LEU A 251 PRO A 254 -1 O ILE A 252 N GLY A 181 SHEET 5 AA8 5 LEU A 151 TRP A 153 -1 N ASN A 152 O ALA A 253 SHEET 1 AA9 2 VAL A 130 THR A 131 0 SHEET 2 AA9 2 THR A 155 HIS A 156 -1 O THR A 155 N THR A 131 SHEET 1 AB1 2 SER A 136 ILE A 140 0 SHEET 2 AB1 2 ASN A 145 SER A 146 -1 O SER A 146 N CYS A 139 SHEET 1 AB2 4 LEU A 164 PRO A 169 0 SHEET 2 AB2 4 ILE A 242 SER A 247 -1 O LEU A 243 N MET A 168 SHEET 3 AB2 4 ILE A 202 THR A 206 -1 N THR A 203 O ASN A 246 SHEET 4 AB2 4 SER A 209 VAL A 213 -1 O VAL A 213 N ILE A 202 SHEET 1 AB3 2 CYS A 281 THR A 283 0 SHEET 2 AB3 2 GLY A 286 ILE A 288 -1 O ILE A 288 N CYS A 281 SHEET 1 AB4 2 GLY A 303 CYS A 305 0 SHEET 2 AB4 2 ASN A 389 LYS A 391 -1 O LYS A 391 N GLY A 303 SSBOND 1 CYS A 14 CYS A 466 1555 1555 2.05 SSBOND 2 CYS A 52 CYS A 277 1555 1555 1.99 SSBOND 3 CYS A 64 CYS A 76 1555 1555 2.04 SSBOND 4 CYS A 97 CYS A 139 1555 1555 2.01 SSBOND 5 CYS A 281 CYS A 305 1555 1555 2.04 SSBOND 6 CYS A 473 CYS A 477 1555 1555 2.08 LINK ND2 ASN A 22 C1 NAG A 601 1555 1555 1.44 LINK ND2 ASN A 38 C1 NAG A 602 1555 1555 1.45 LINK ND2 ASN A 63 C1 NAG A 603 1555 1555 1.44 LINK ND2 ASN A 133 C1 NAG A 604 1555 1555 1.44 LINK ND2 ASN A 165 C1 NAG B 1 1555 1555 1.44 LINK ND2 ASN A 246 C1 NAG A 607 1555 1555 1.44 LINK ND2 ASN A 285 C1 NAG A 608 1555 1555 1.46 LINK ND2 ASN A 483 C1 NAG A 609 1555 1555 1.45 LINK O4 NAG B 1 C1 NAG B 2 1555 1555 1.43 CISPEP 1 SER A 54 PRO A 55 0 2.40 CRYST1 100.733 100.733 382.613 90.00 90.00 120.00 H 3 2 18 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009927 0.005731 0.000000 0.00000 SCALE2 0.000000 0.011463 0.000000 0.00000 SCALE3 0.000000 0.000000 0.002614 0.00000