HEADER HYDROLASE/HYDROLASE INHIBITOR 02-OCT-14 4WKE TITLE CRYSTAL STRUCTURE OF HUMAN ADAMTS-4 IN COMPLEX WITH INHIBITOR 5- TITLE 2 CHLORO-N-{[(4R)-2,5-DIOXO-4-(1,3-THIAZOL-2-YL)IMIDAZOLIDIN-4- TITLE 3 YL]METHYL}-1-BENZOFURAN-2-CARBOXAMIDE (COMPOUND 10) COMPND MOL_ID: 1; COMPND 2 MOLECULE: A DISINTEGRIN AND METALLOPROTEINASE WITH THROMBOSPONDIN COMPND 3 MOTIFS 4; COMPND 4 CHAIN: A; COMPND 5 FRAGMENT: UNP RESIDUES 213-439; COMPND 6 SYNONYM: ADAMTS-4,ADMP-1,AGGRECANASE-1; COMPND 7 EC: 3.4.24.82; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: ADAMTS4, KIAA0688, UNQ769/PRO1563; SOURCE 6 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 8 EXPRESSION_SYSTEM_CELL_LINE: HEK293 KEYWDS METALLOPROTEASE, OSTEOARTHRITIS, INHIBITOR, HYDROLASE-HYDROLASE KEYWDS 2 INHIBITOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR J.D.DURBIN REVDAT 4 27-DEC-23 4WKE 1 SOURCE KEYWDS JRNL REMARK REVDAT 4 2 1 LINK REVDAT 3 14-JAN-15 4WKE 1 JRNL REVDAT 2 17-DEC-14 4WKE 1 JRNL REVDAT 1 10-DEC-14 4WKE 0 JRNL AUTH T.B.DURHAM,V.J.KLIMKOWSKI,C.J.RITO,J.MARIMUTHU,J.L.TOTH, JRNL AUTH 2 C.LIU,J.D.DURBIN,S.L.STOUT,L.ADAMS,C.SWEARINGEN,C.LIN, JRNL AUTH 3 M.G.CHAMBERS,K.THIRUNAVUKKARASU,M.R.WILEY JRNL TITL IDENTIFICATION OF POTENT AND SELECTIVE HYDANTOIN INHIBITORS JRNL TITL 2 OF AGGRECANASE-1 AND AGGRECANASE-2 THAT ARE EFFICACIOUS IN JRNL TITL 3 BOTH CHEMICAL AND SURGICAL MODELS OF OSTEOARTHRITIS. JRNL REF J.MED.CHEM. V. 57 10476 2014 JRNL REFN ISSN 0022-2623 JRNL PMID 25415648 JRNL DOI 10.1021/JM501522N REMARK 2 REMARK 2 RESOLUTION. 1.62 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0049 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.62 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 21.70 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 3 NUMBER OF REFLECTIONS : 25473 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.188 REMARK 3 R VALUE (WORKING SET) : 0.187 REMARK 3 FREE R VALUE : 0.209 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1346 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.62 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.66 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1767 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 94.46 REMARK 3 BIN R VALUE (WORKING SET) : 0.2110 REMARK 3 BIN FREE R VALUE SET COUNT : 74 REMARK 3 BIN FREE R VALUE : 0.2730 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1613 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 42 REMARK 3 SOLVENT ATOMS : 164 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 25.02 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.81000 REMARK 3 B22 (A**2) : -0.66000 REMARK 3 B33 (A**2) : -0.15000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.098 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.092 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.086 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.343 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.953 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.936 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1711 ; 0.006 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 1593 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2338 ; 1.199 ; 1.985 REMARK 3 BOND ANGLES OTHERS (DEGREES): 3671 ; 0.758 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 217 ; 5.301 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 68 ;30.277 ;23.529 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 254 ;12.981 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 10 ;15.887 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 266 ; 0.066 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1948 ; 0.005 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 368 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 859 ; 1.133 ; 2.343 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 858 ; 1.128 ; 2.339 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1070 ; 1.930 ; 3.501 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : REFINED INDIVIDUALLY REMARK 4 REMARK 4 4WKE COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 02-OCT-14. REMARK 100 THE DEPOSITION ID IS D_1000203978. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 25-JUL-07 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 31-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.980 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MAR CCD 165 MM REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 26956 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.620 REMARK 200 RESOLUTION RANGE LOW (A) : 21.720 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 200 DATA REDUNDANCY : 6.300 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 6.6100 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 38.80 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.01 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 3350, BIS-TRIS, PH 6.5, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 20.13750 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 37.38250 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 34.01750 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 37.38250 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 20.13750 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 34.01750 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 PHE A 213 REMARK 465 ALA A 214 REMARK 465 SER A 215 REMARK 465 GLY A 273 REMARK 465 SER A 274 REMARK 465 GLY A 275 REMARK 465 GLU A 276 REMARK 465 SER A 385 REMARK 465 THR A 386 REMARK 465 VAL A 436 REMARK 465 THR A 437 REMARK 465 PHE A 438 REMARK 465 PRO A 439 REMARK 465 ASP A 440 REMARK 465 VAL A 441 REMARK 465 HIS A 442 REMARK 465 HIS A 443 REMARK 465 HIS A 444 REMARK 465 HIS A 445 REMARK 465 HIS A 446 REMARK 465 HIS A 447 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLN A 280 CG CD OE1 NE2 REMARK 470 GLU A 429 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 259 -48.72 68.83 REMARK 500 LEU A 353 -43.52 -135.82 REMARK 500 ASN A 368 17.81 80.51 REMARK 500 GLU A 402 68.78 -154.26 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 502 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 221 OE1 REMARK 620 2 ASP A 304 OD1 65.0 REMARK 620 3 ASP A 304 OD2 112.9 48.2 REMARK 620 4 ASP A 311 OD1 98.0 83.2 81.6 REMARK 620 5 ASP A 311 OD2 85.9 122.6 132.2 51.6 REMARK 620 6 CYS A 423 O 170.4 124.5 76.5 85.0 88.9 REMARK 620 7 ASP A 426 OD1 95.4 87.8 78.2 159.0 146.1 84.5 REMARK 620 8 HOH A 672 O 83.5 140.3 146.3 126.8 75.7 87.4 70.8 REMARK 620 N 1 2 3 4 5 6 7 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 503 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 221 OE1 REMARK 620 2 GLU A 221 OE2 51.7 REMARK 620 3 ASP A 304 O 142.1 158.0 REMARK 620 4 ASP A 304 OD1 71.2 121.7 71.6 REMARK 620 5 ASP A 426 OD2 92.0 105.0 92.8 86.2 REMARK 620 6 HOH A 681 O 97.7 76.3 83.7 103.4 168.1 REMARK 620 7 HOH A 690 O 127.6 80.3 90.3 156.7 80.1 88.5 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 504 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 320 OD1 REMARK 620 2 LEU A 321 O 88.2 REMARK 620 3 CYS A 327 O 89.6 87.7 REMARK 620 4 THR A 329 O 169.8 84.3 96.9 REMARK 620 5 GLU A 349 OE1 91.2 102.4 169.9 83.8 REMARK 620 6 HOH A 674 O 91.4 170.0 82.3 97.2 87.7 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 501 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 361 NE2 REMARK 620 2 HIS A 365 NE2 99.1 REMARK 620 3 HIS A 371 NE2 109.3 104.0 REMARK 620 4 3PU A 508 N18 109.7 127.7 106.1 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA A 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA A 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA A 504 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 505 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 506 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 507 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 3PU A 508 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4WK7 RELATED DB: PDB REMARK 900 RELATED ID: 4WKI RELATED DB: PDB DBREF 4WKE A 213 439 UNP O75173 ATS4_HUMAN 213 439 SEQADV 4WKE ASP A 440 UNP O75173 EXPRESSION TAG SEQADV 4WKE VAL A 441 UNP O75173 EXPRESSION TAG SEQADV 4WKE HIS A 442 UNP O75173 EXPRESSION TAG SEQADV 4WKE HIS A 443 UNP O75173 EXPRESSION TAG SEQADV 4WKE HIS A 444 UNP O75173 EXPRESSION TAG SEQADV 4WKE HIS A 445 UNP O75173 EXPRESSION TAG SEQADV 4WKE HIS A 446 UNP O75173 EXPRESSION TAG SEQADV 4WKE HIS A 447 UNP O75173 EXPRESSION TAG SEQRES 1 A 235 PHE ALA SER LEU SER ARG PHE VAL GLU THR LEU VAL VAL SEQRES 2 A 235 ALA ASP ASP LYS MET ALA ALA PHE HIS GLY ALA GLY LEU SEQRES 3 A 235 LYS ARG TYR LEU LEU THR VAL MET ALA ALA ALA ALA LYS SEQRES 4 A 235 ALA PHE LYS HIS PRO SER ILE ARG ASN PRO VAL SER LEU SEQRES 5 A 235 VAL VAL THR ARG LEU VAL ILE LEU GLY SER GLY GLU GLU SEQRES 6 A 235 GLY PRO GLN VAL GLY PRO SER ALA ALA GLN THR LEU ARG SEQRES 7 A 235 SER PHE CYS ALA TRP GLN ARG GLY LEU ASN THR PRO GLU SEQRES 8 A 235 ASP SER ASP PRO ASP HIS PHE ASP THR ALA ILE LEU PHE SEQRES 9 A 235 THR ARG GLN ASP LEU CYS GLY VAL SER THR CYS ASP THR SEQRES 10 A 235 LEU GLY MET ALA ASP VAL GLY THR VAL CYS ASP PRO ALA SEQRES 11 A 235 ARG SER CYS ALA ILE VAL GLU ASP ASP GLY LEU GLN SER SEQRES 12 A 235 ALA PHE THR ALA ALA HIS GLU LEU GLY HIS VAL PHE ASN SEQRES 13 A 235 MET LEU HIS ASP ASN SER LYS PRO CYS ILE SER LEU ASN SEQRES 14 A 235 GLY PRO LEU SER THR SER ARG HIS VAL MET ALA PRO VAL SEQRES 15 A 235 MET ALA HIS VAL ASP PRO GLU GLU PRO TRP SER PRO CYS SEQRES 16 A 235 SER ALA ARG PHE ILE THR ASP PHE LEU ASP ASN GLY TYR SEQRES 17 A 235 GLY HIS CYS LEU LEU ASP LYS PRO GLU ALA PRO LEU HIS SEQRES 18 A 235 LEU PRO VAL THR PHE PRO ASP VAL HIS HIS HIS HIS HIS SEQRES 19 A 235 HIS HET ZN A 501 1 HET CA A 502 1 HET CA A 503 1 HET CA A 504 1 HET EDO A 505 4 HET EDO A 506 4 HET EDO A 507 4 HET 3PU A 508 26 HETNAM ZN ZINC ION HETNAM CA CALCIUM ION HETNAM EDO 1,2-ETHANEDIOL HETNAM 3PU 5-CHLORO-N-{[(4R)-2,5-DIOXO-4-(1,3-THIAZOL-2-YL) HETNAM 2 3PU IMIDAZOLIDIN-4-YL]METHYL}-1-BENZOFURAN-2-CARBOXAMIDE HETSYN EDO ETHYLENE GLYCOL FORMUL 2 ZN ZN 2+ FORMUL 3 CA 3(CA 2+) FORMUL 6 EDO 3(C2 H6 O2) FORMUL 9 3PU C16 H11 CL N4 O4 S FORMUL 10 HOH *164(H2 O) HELIX 1 AA1 ASP A 227 GLY A 235 1 9 HELIX 2 AA2 GLY A 237 HIS A 255 1 19 HELIX 3 AA3 PRO A 256 ARG A 259 5 4 HELIX 4 AA4 SER A 284 GLY A 298 1 15 HELIX 5 AA5 GLN A 354 PHE A 367 1 14 HELIX 6 AA6 SER A 374 GLY A 382 1 9 HELIX 7 AA7 SER A 405 ASN A 418 1 14 HELIX 8 AA8 GLY A 421 LEU A 425 5 5 SHEET 1 AA1 5 SER A 263 ILE A 271 0 SHEET 2 AA1 5 PHE A 219 ALA A 226 1 N THR A 222 O VAL A 265 SHEET 3 AA1 5 THR A 312 THR A 317 1 O PHE A 316 N VAL A 225 SHEET 4 AA1 5 CYS A 345 GLU A 349 1 O VAL A 348 N LEU A 315 SHEET 5 AA1 5 GLY A 331 ALA A 333 -1 N MET A 332 O ILE A 347 SSBOND 1 CYS A 293 CYS A 345 1555 1555 2.08 SSBOND 2 CYS A 322 CYS A 327 1555 1555 2.04 SSBOND 3 CYS A 339 CYS A 423 1555 1555 2.05 SSBOND 4 CYS A 377 CYS A 407 1555 1555 2.06 LINK OE1 GLU A 221 CA CA A 502 1555 1555 2.44 LINK OE1 GLU A 221 CA CA A 503 1555 1555 2.36 LINK OE2 GLU A 221 CA CA A 503 1555 1555 2.59 LINK OD1 ASP A 304 CA CA A 502 1555 1555 2.77 LINK OD2 ASP A 304 CA CA A 502 1555 1555 2.49 LINK O ASP A 304 CA CA A 503 1555 1555 2.38 LINK OD1 ASP A 304 CA CA A 503 1555 1555 2.47 LINK OD1 ASP A 311 CA CA A 502 1555 1555 2.53 LINK OD2 ASP A 311 CA CA A 502 1555 1555 2.47 LINK OD1 ASP A 320 CA CA A 504 1555 1555 2.31 LINK O LEU A 321 CA CA A 504 1555 1555 2.40 LINK O CYS A 327 CA CA A 504 1555 1555 2.33 LINK O THR A 329 CA CA A 504 1555 1555 2.41 LINK OE1 GLU A 349 CA CA A 504 1555 1555 2.40 LINK NE2 HIS A 361 ZN ZN A 501 1555 1555 2.07 LINK NE2 HIS A 365 ZN ZN A 501 1555 1555 2.12 LINK NE2 HIS A 371 ZN ZN A 501 1555 1555 2.04 LINK O CYS A 423 CA CA A 502 1555 1555 2.36 LINK OD1 ASP A 426 CA CA A 502 1555 1555 2.47 LINK OD2 ASP A 426 CA CA A 503 1555 1555 2.24 LINK ZN ZN A 501 N18 3PU A 508 1555 1555 2.05 LINK CA CA A 502 O HOH A 672 1555 1555 2.43 LINK CA CA A 503 O HOH A 681 1555 1555 2.38 LINK CA CA A 503 O HOH A 690 1555 1555 2.37 LINK CA CA A 504 O HOH A 674 1555 1555 2.33 SITE 1 AC1 4 HIS A 361 HIS A 365 HIS A 371 3PU A 508 SITE 1 AC2 6 GLU A 221 ASP A 304 ASP A 311 CYS A 423 SITE 2 AC2 6 ASP A 426 HOH A 672 SITE 1 AC3 5 GLU A 221 ASP A 304 ASP A 426 HOH A 681 SITE 2 AC3 5 HOH A 690 SITE 1 AC4 6 ASP A 320 LEU A 321 CYS A 327 THR A 329 SITE 2 AC4 6 GLU A 349 HOH A 674 SITE 1 AC5 5 GLN A 354 ALA A 396 HIS A 397 VAL A 398 SITE 2 AC5 5 HOH A 606 SITE 1 AC6 6 MET A 332 ALA A 333 GLU A 362 HIS A 365 SITE 2 AC6 6 3PU A 508 HOH A 725 SITE 1 AC7 7 ASP A 328 VAL A 394 MET A 395 3PU A 508 SITE 2 AC7 7 HOH A 732 HOH A 758 HOH A 763 SITE 1 AC8 16 THR A 329 LEU A 330 GLY A 331 MET A 332 SITE 2 AC8 16 HIS A 361 GLU A 362 HIS A 365 HIS A 371 SITE 3 AC8 16 VAL A 390 ALA A 392 PRO A 393 VAL A 394 SITE 4 AC8 16 MET A 395 ZN A 501 EDO A 506 EDO A 507 CRYST1 40.275 68.035 74.765 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.024829 0.000000 0.000000 0.00000 SCALE2 0.000000 0.014698 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013375 0.00000