HEADER LAMININ BINDING PROTEIN 14-OCT-14 4WNX TITLE NETRIN 4 LACKING THE C-TERMINAL DOMAIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: NETRIN-4; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: BETA-NETRIN; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 GENE: NTN4; SOURCE 6 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 8 EXPRESSION_SYSTEM_CELL_LINE: HEK293; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PCEP KEYWDS BASEMENT MEMBRANE, LAMININ BINDING, N-LINKED GLYCOSYLATION, EPIDERMAL KEYWDS 2 GROWTH FACTOR LIKE DOMAIN, LAMININ BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR M.MCDOUGALL,T.PATEL,R.REUTEN,M.MEIER,M.KOCH,J.STETEFELD REVDAT 5 27-SEP-23 4WNX 1 HETSYN REVDAT 4 29-JUL-20 4WNX 1 COMPND REMARK HETNAM LINK REVDAT 4 2 1 SITE ATOM REVDAT 3 22-NOV-17 4WNX 1 REMARK REVDAT 2 14-DEC-16 4WNX 1 JRNL REVDAT 1 10-FEB-16 4WNX 0 JRNL AUTH R.REUTEN,T.R.PATEL,M.MCDOUGALL,N.RAMA,D.NIKODEMUS,B.GIBERT, JRNL AUTH 2 J.G.DELCROS,C.PREIN,M.MEIER,S.METZGER,Z.ZHOU,J.KALTENBERG, JRNL AUTH 3 K.K.MCKEE,T.BALD,T.TUTING,P.ZIGRINO,V.DJONOV,W.BLOCH, JRNL AUTH 4 H.CLAUSEN-SCHAUMANN,E.POSCHL,P.D.YURCHENCO,M.EHRBAR, JRNL AUTH 5 P.MEHLEN,J.STETEFELD,M.KOCH JRNL TITL STRUCTURAL DECODING OF NETRIN-4 REVEALS A REGULATORY JRNL TITL 2 FUNCTION TOWARDS MATURE BASEMENT MEMBRANES. JRNL REF NAT COMMUN V. 7 13515 2016 JRNL REFN ESSN 2041-1723 JRNL PMID 27901020 JRNL DOI 10.1038/NCOMMS13515 REMARK 2 REMARK 2 RESOLUTION. 2.72 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.8.4_1496) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.72 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 33.49 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 91.8 REMARK 3 NUMBER OF REFLECTIONS : 14670 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.222 REMARK 3 R VALUE (WORKING SET) : 0.220 REMARK 3 FREE R VALUE : 0.263 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.040 REMARK 3 FREE R VALUE TEST SET COUNT : 740 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 33.4933 - 4.6529 1.00 3096 158 0.1805 0.2370 REMARK 3 2 4.6529 - 3.6947 1.00 3037 169 0.1841 0.2129 REMARK 3 3 3.6947 - 3.2281 1.00 3016 163 0.2348 0.3000 REMARK 3 4 3.2281 - 2.9331 1.00 3027 167 0.3028 0.3093 REMARK 3 5 2.9331 - 2.7230 0.58 1754 83 0.3359 0.3962 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.400 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 28.060 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 40.70 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 49.97 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.003 3471 REMARK 3 ANGLE : 0.800 4691 REMARK 3 CHIRALITY : 0.047 496 REMARK 3 PLANARITY : 0.004 622 REMARK 3 DIHEDRAL : 21.400 2096 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ( CHAIN A AND ( RESID 30:181 OR RESID 508:508 ) ) REMARK 3 ORIGIN FOR THE GROUP (A): 33.3103 3.9537 67.1661 REMARK 3 T TENSOR REMARK 3 T11: 0.4190 T22: 0.1778 REMARK 3 T33: 0.3037 T12: -0.0051 REMARK 3 T13: -0.1780 T23: -0.0048 REMARK 3 L TENSOR REMARK 3 L11: 0.1881 L22: 2.1075 REMARK 3 L33: 0.7752 L12: 0.2019 REMARK 3 L13: 0.0835 L23: -1.0578 REMARK 3 S TENSOR REMARK 3 S11: 0.1540 S12: 0.0087 S13: -0.2045 REMARK 3 S21: 0.0359 S22: -0.0541 S23: 0.0603 REMARK 3 S31: 0.1198 S32: -0.0563 S33: -0.1024 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: ( CHAIN A AND RESID 182:395 ) REMARK 3 ORIGIN FOR THE GROUP (A): 37.6699 26.0707 54.2208 REMARK 3 T TENSOR REMARK 3 T11: 0.4849 T22: 0.0881 REMARK 3 T33: 0.3638 T12: 0.0199 REMARK 3 T13: -0.1488 T23: 0.0345 REMARK 3 L TENSOR REMARK 3 L11: 0.2000 L22: 2.9000 REMARK 3 L33: 0.9402 L12: 0.2631 REMARK 3 L13: 0.0087 L23: -1.3601 REMARK 3 S TENSOR REMARK 3 S11: 0.0607 S12: 0.0129 S13: 0.0074 REMARK 3 S21: -0.1005 S22: -0.0458 S23: 0.0826 REMARK 3 S31: 0.0440 S32: -0.0352 S33: -0.0260 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: ( CHAIN A AND RESID 396:462 ) REMARK 3 ORIGIN FOR THE GROUP (A): 22.8277 77.9407 21.9274 REMARK 3 T TENSOR REMARK 3 T11: 0.3803 T22: 0.1944 REMARK 3 T33: 0.4054 T12: 0.0371 REMARK 3 T13: -0.0404 T23: 0.1440 REMARK 3 L TENSOR REMARK 3 L11: 3.6795 L22: 4.7171 REMARK 3 L33: 2.5146 L12: -0.1981 REMARK 3 L13: 0.6381 L23: 0.3063 REMARK 3 S TENSOR REMARK 3 S11: 0.1868 S12: 0.1816 S13: -0.0035 REMARK 3 S21: 0.0577 S22: -0.0998 S23: -0.0474 REMARK 3 S31: -0.3460 S32: 0.1178 S33: -0.0286 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4WNX COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 16-OCT-14. REMARK 100 THE DEPOSITION ID IS D_1000203271. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 16-JUL-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU MICROMAX-007 HF REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.54178 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS IV++ REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : HKL-2000, SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 14673 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.720 REMARK 200 RESOLUTION RANGE LOW (A) : 33.490 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 91.8 REMARK 200 DATA REDUNDANCY : 3.400 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 5.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 4AQS REMARK 200 REMARK 200 REMARK: THIN PLATES REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 57.27 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.88 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG3350, CALCIUM ACETATE, SODIUM REMARK 280 CACODYLATE, NDSB-256, PH 6.5, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 53.87750 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 37.52450 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 53.87750 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 37.52450 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1460 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 23010 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 5.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LYS A 281 REMARK 465 ALA A 282 REMARK 465 PRO A 283 REMARK 465 GLY A 284 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 31 CG CD OE1 OE2 REMARK 470 ASP A 69 CG OD1 OD2 REMARK 470 PHE A 99 CG CD1 CD2 CE1 CE2 CZ REMARK 470 PHE A 101 CG CD1 CD2 CE1 CE2 CZ REMARK 470 LYS A 152 CG CD CE NZ REMARK 470 LYS A 177 CG CD CE NZ REMARK 470 GLN A 237 CG CD OE1 NE2 REMARK 470 ILE A 238 CG1 CG2 CD1 REMARK 470 ASN A 239 CG OD1 ND2 REMARK 470 ASP A 240 CG OD1 OD2 REMARK 470 MET A 249 CG SD CE REMARK 470 ARG A 278 CG CD NE CZ NH1 NH2 REMARK 470 PHE A 286 CG CD1 CD2 CE1 CE2 CZ REMARK 470 HIS A 287 CG ND1 CD2 CE1 NE2 REMARK 470 GLU A 349 CG CD OE1 OE2 REMARK 470 ASP A 450 CG OD1 OD2 REMARK 470 SER A 454 OG REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD2 ASP A 96 OG1 THR A 104 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 31 -75.07 -61.22 REMARK 500 LYS A 32 -167.83 -79.38 REMARK 500 ASN A 56 -93.51 -86.86 REMARK 500 PHE A 99 72.54 -157.83 REMARK 500 PHE A 101 -70.30 -53.71 REMARK 500 ASP A 111 71.71 53.43 REMARK 500 HIS A 129 143.20 -173.79 REMARK 500 TYR A 157 -51.26 -122.82 REMARK 500 GLU A 208 169.89 69.12 REMARK 500 ARG A 231 -179.12 -68.52 REMARK 500 PRO A 235 23.03 -77.80 REMARK 500 ILE A 238 32.48 -89.47 REMARK 500 MET A 249 82.46 -68.94 REMARK 500 CYS A 264 20.63 -140.18 REMARK 500 LYS A 296 -169.11 -118.00 REMARK 500 ASN A 312 41.73 -103.92 REMARK 500 GLU A 367 -33.83 -147.95 REMARK 500 ASP A 390 35.37 -93.35 REMARK 500 ASN A 417 -6.65 -143.30 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 NAG A 504 REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 507 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ALA A 93 O REMARK 620 2 ASP A 96 OD1 64.4 REMARK 620 3 THR A 104 O 86.8 145.9 REMARK 620 4 THR A 104 OG1 77.5 81.4 74.5 REMARK 620 5 TYR A 254 O 77.1 116.5 70.5 137.5 REMARK 620 6 HOH A 605 O 86.7 61.6 138.4 143.0 68.0 REMARK 620 N 1 2 3 4 5 DBREF 4WNX A 30 462 UNP Q9JI33 NET4_MOUSE 30 462 SEQRES 1 A 433 CYS GLU LYS ALA CYS ASN PRO ARG MET GLY ASN LEU ALA SEQRES 2 A 433 LEU GLY ARG LYS LEU ARG ALA ASP THR MET CYS GLY GLN SEQRES 3 A 433 ASN ALA THR GLU LEU PHE CYS PHE TYR SER GLU ASN ALA SEQRES 4 A 433 ASP LEU THR CYS ARG GLN PRO LYS CYS ASP LYS CYS ASN SEQRES 5 A 433 ALA ALA HIS SER HIS LEU ALA HIS PRO PRO SER ALA MET SEQRES 6 A 433 ALA ASP SER SER PHE ARG PHE PRO ARG THR TRP TRP GLN SEQRES 7 A 433 SER ALA GLU ASP VAL HIS ARG GLU LYS ILE GLN LEU ASP SEQRES 8 A 433 LEU GLU ALA GLU PHE TYR PHE THR HIS LEU ILE MET VAL SEQRES 9 A 433 PHE LYS SER PRO ARG PRO ALA ALA MET VAL LEU ASP ARG SEQRES 10 A 433 SER GLN ASP PHE GLY LYS THR TRP LYS PRO TYR LYS TYR SEQRES 11 A 433 PHE ALA THR ASN CYS SER ALA THR PHE GLY LEU GLU ASP SEQRES 12 A 433 ASP VAL VAL LYS LYS GLY ALA ILE CYS THR SER ARG TYR SEQRES 13 A 433 SER ASN PRO PHE PRO CYS THR GLY GLY GLU VAL ILE PHE SEQRES 14 A 433 ARG ALA LEU SER PRO PRO TYR ASP ILE GLU ASN PRO TYR SEQRES 15 A 433 SER ALA LYS VAL GLN GLU GLN LEU LYS ILE THR ASN LEU SEQRES 16 A 433 ARG VAL ARG LEU LEU LYS ARG GLN SER CYS PRO CYS GLN SEQRES 17 A 433 ILE ASN ASP LEU ASN ALA LYS PRO HIS HIS PHE MET HIS SEQRES 18 A 433 TYR ALA VAL TYR ASP PHE ILE VAL LYS GLY SER CYS PHE SEQRES 19 A 433 CYS ASN GLY HIS ALA ASP GLN CYS LEU PRO VAL GLU GLY SEQRES 20 A 433 PHE ARG PRO ILE LYS ALA PRO GLY ALA PHE HIS VAL VAL SEQRES 21 A 433 HIS GLY ARG CYS MET CYS LYS HIS ASN THR ALA GLY SER SEQRES 22 A 433 HIS CYS GLN HIS CYS ALA PRO LEU TYR ASN ASP ARG PRO SEQRES 23 A 433 TRP GLU ALA ALA ASP GLY ARG THR GLY ALA PRO ASN GLU SEQRES 24 A 433 CYS ARG THR CYS LYS CYS ASN GLY HIS ALA ASP THR CYS SEQRES 25 A 433 HIS PHE ASP VAL ASN VAL TRP GLU ALA SER GLY ASN ARG SEQRES 26 A 433 SER GLY GLY VAL CYS ASN ASN CYS GLN HIS ASN THR GLU SEQRES 27 A 433 GLY GLN HIS CYS GLN ARG CYS LYS PRO GLY PHE TYR ARG SEQRES 28 A 433 ASP LEU ARG ARG PRO PHE SER ALA PRO ASP ALA CYS LYS SEQRES 29 A 433 ALA CYS SER CYS HIS PRO VAL GLY SER ALA ILE LEU PRO SEQRES 30 A 433 PHE SER SER VAL THR PHE CYS ASP PRO SER ASN GLY ASP SEQRES 31 A 433 CYS PRO CYS LYS PRO GLY VAL ALA GLY PRO HIS CYS ASP SEQRES 32 A 433 ARG CYS MET VAL GLY TYR TRP GLY PHE GLY ASP TYR GLY SEQRES 33 A 433 CYS ARG PRO CYS ASP CYS ALA GLY SER CYS ASP PRO LEU SEQRES 34 A 433 THR GLY ASP CYS HET NAG B 1 26 HET NAG B 2 27 HET NAG C 1 26 HET NAG C 2 27 HET NAG A 503 27 HET NAG A 504 27 HET CA A 507 1 HET TAM A 508 28 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM CA CALCIUM ION HETNAM TAM TRIS(HYDROXYETHYL)AMINOMETHANE HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE FORMUL 2 NAG 6(C8 H15 N O6) FORMUL 6 CA CA 2+ FORMUL 7 TAM C7 H17 N O3 FORMUL 8 HOH *27(H2 O) HELIX 1 AA1 PRO A 90 MET A 94 5 5 HELIX 2 AA2 ASN A 163 PHE A 168 1 6 HELIX 3 AA3 ASP A 172 LYS A 177 1 6 HELIX 4 AA4 SER A 202 ILE A 207 1 6 HELIX 5 AA5 SER A 212 LEU A 219 1 8 HELIX 6 AA6 ASP A 344 SER A 351 1 8 HELIX 7 AA7 ALA A 388 ASP A 390 5 3 SHEET 1 AA1 7 TRP A 106 GLN A 107 0 SHEET 2 AA1 7 ALA A 252 CYS A 262 -1 O VAL A 253 N TRP A 106 SHEET 3 AA1 7 GLU A 115 PHE A 134 -1 N VAL A 133 O TYR A 254 SHEET 4 AA1 7 LYS A 220 LYS A 230 -1 O VAL A 226 N ILE A 117 SHEET 5 AA1 7 ALA A 141 SER A 147 -1 N SER A 147 O THR A 222 SHEET 6 AA1 7 LYS A 155 ALA A 161 -1 O PHE A 160 N MET A 142 SHEET 7 AA1 7 CYS A 181 THR A 182 1 O THR A 182 N ALA A 161 SHEET 1 AA2 3 LEU A 47 ALA A 49 0 SHEET 2 AA2 3 GLU A 115 PHE A 134 -1 O GLN A 118 N ARG A 48 SHEET 3 AA2 3 GLU A 195 ARG A 199 -1 O VAL A 196 N MET A 132 SHEET 1 AA3 3 GLY A 39 ASN A 40 0 SHEET 2 AA3 3 ALA A 252 CYS A 262 -1 O GLY A 260 N GLY A 39 SHEET 3 AA3 3 TRP A 106 GLN A 107 -1 N TRP A 106 O VAL A 253 SHEET 1 AA4 4 GLU A 195 ARG A 199 0 SHEET 2 AA4 4 GLU A 115 PHE A 134 -1 N MET A 132 O VAL A 196 SHEET 3 AA4 4 ALA A 252 CYS A 262 -1 O TYR A 254 N VAL A 133 SHEET 4 AA4 4 GLY A 39 ASN A 40 -1 N GLY A 39 O GLY A 260 SHEET 1 AA5 2 GLU A 59 CYS A 62 0 SHEET 2 AA5 2 CYS A 77 CYS A 80 -1 O CYS A 80 N GLU A 59 SHEET 1 AA6 2 CYS A 271 LEU A 272 0 SHEET 2 AA6 2 ARG A 292 CYS A 293 -1 O ARG A 292 N LEU A 272 SHEET 1 AA7 2 THR A 299 ALA A 300 0 SHEET 2 AA7 2 HIS A 306 CYS A 307 -1 O HIS A 306 N ALA A 300 SHEET 1 AA8 2 CYS A 341 PHE A 343 0 SHEET 2 AA8 2 GLY A 357 CYS A 359 -1 O VAL A 358 N HIS A 342 SHEET 1 AA9 2 PHE A 378 ARG A 380 0 SHEET 2 AA9 2 CYS A 392 ALA A 394 -1 O LYS A 393 N TYR A 379 SHEET 1 AB1 2 VAL A 426 ALA A 427 0 SHEET 2 AB1 2 ARG A 433 CYS A 434 -1 O ARG A 433 N ALA A 427 SHEET 1 AB2 2 TYR A 438 GLY A 442 0 SHEET 2 AB2 2 GLY A 445 PRO A 448 -1 O ARG A 447 N TRP A 439 SSBOND 1 CYS A 30 CYS A 34 1555 1555 2.03 SSBOND 2 CYS A 53 CYS A 80 1555 1555 2.03 SSBOND 3 CYS A 62 CYS A 77 1555 1555 2.03 SSBOND 4 CYS A 72 CYS A 236 1555 1555 2.03 SSBOND 5 CYS A 164 CYS A 181 1555 1555 2.03 SSBOND 6 CYS A 191 CYS A 234 1555 1555 2.03 SSBOND 7 CYS A 262 CYS A 271 1555 1555 2.03 SSBOND 8 CYS A 264 CYS A 293 1555 1555 2.03 SSBOND 9 CYS A 295 CYS A 304 1555 1555 2.03 SSBOND 10 CYS A 307 CYS A 329 1555 1555 2.04 SSBOND 11 CYS A 332 CYS A 341 1555 1555 2.03 SSBOND 12 CYS A 334 CYS A 359 1555 1555 2.03 SSBOND 13 CYS A 362 CYS A 371 1555 1555 2.03 SSBOND 14 CYS A 374 CYS A 392 1555 1555 2.03 SSBOND 15 CYS A 395 CYS A 413 1555 1555 2.03 SSBOND 16 CYS A 397 CYS A 420 1555 1555 2.03 SSBOND 17 CYS A 422 CYS A 431 1555 1555 2.03 SSBOND 18 CYS A 434 CYS A 446 1555 1555 2.03 SSBOND 19 CYS A 449 CYS A 455 1555 1555 2.03 SSBOND 20 CYS A 451 CYS A 462 1555 1555 2.03 LINK ND2 ASN A 56 C1 NAG A 503 1555 1555 1.44 LINK ND2 ASN A 163 C1 NAG C 1 1555 1555 1.45 LINK ND2 ASN A 353 C1 NAG B 1 1555 1555 1.46 LINK O4 NAG B 1 C1 NAG B 2 1555 1555 1.45 LINK O4 NAG C 1 C1 NAG C 2 1555 1555 1.44 LINK O ALA A 93 CA CA A 507 1555 1555 2.66 LINK OD1 ASP A 96 CA CA A 507 1555 1555 2.44 LINK O THR A 104 CA CA A 507 1555 1555 2.67 LINK OG1 THR A 104 CA CA A 507 1555 1555 2.49 LINK O TYR A 254 CA CA A 507 1555 1555 2.57 LINK CA CA A 507 O HOH A 605 1555 1555 2.75 CISPEP 1 PHE A 189 PRO A 190 0 1.46 CISPEP 2 CYS A 451 ALA A 452 0 2.16 CISPEP 3 ALA A 452 GLY A 453 0 2.44 CRYST1 107.755 75.049 74.672 90.00 96.07 90.00 C 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009280 0.000000 0.000987 0.00000 SCALE2 0.000000 0.013325 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013467 0.00000